Patent classifications
C12N15/1006
HYDROGEL BEADS FOR NUCLEOTIDE SEQUENCING
Systems, methods, and compositions provided herein relate to preparation of beads encapsulating genetic material. Some embodiments include preparation of nucleic acid libraries within the bead, wherein the bead includes pores that allow diffusion of reagents while retaining genetic material.
MATE AND SEPARATE: A CONVENIENT AND GENERAL METHOD FOR THE SEPARATION AND PURIFICATION OF TARGET MOLECULES FROM BIOLOGICAL MEDIA BY PHASE TRANSITION OF PEGYLATED RECOGNITION AGENTS.
Biological small molecules, proteins or nucleic acids (target molecules, TM) are isolated in from biological media such as blood serum, cytoplasm, nucleoplasm etc. by a novel process (mate and separate) involving the use of PEGylated recognition molecule (PEG-RM) with high specificity and binding for TM, affording a macromolecular complex PEG-RM.TM, from which the target protein can be obtained in pure form.
CHROMOSOME CONFORMATION CAPTURE FROM TISSUE SAMPLES
Provided herein are methods and systems for identifying chromosomal structural variants in a preserved sample obtained from a subject using focused acoustic energy and chromosomal conformational capture. Also provided herein are methods and systems for relating the chromosomal structural variants identified from the preserved tissue sample to diseases or disorders, and methods of treating same.
CHROMOSOME CONFORMATION CAPTURE FROM TISSUE SAMPLES
Provided herein are methods and systems for identifying chromosomal structural variants in a preserved sample obtained from a subject using focused acoustic energy and chromosomal conformational capture. Also provided herein are methods and systems for relating the chromosomal structural variants identified from the preserved tissue sample to diseases or disorders, and methods of treating same.
METHOD FOR EXTRACTION OF CELL-FREE DNA
Provided herein are compositions and methods for extracting cell-free DNA (cfDNA) from a biological sample without the need for pretreatment with proteases prior to binding of the cfDNA to a solid substrate and without a heated elution step. The methods comprise contacting the biological sample with a chelating agent and an oxidizing agent prior to eluting the cell-free DNA from a solid substrate.
SOLID PHASE EXTRACTION MATERIAL AND ITS USE FOR NUCLEIC ACID ENRICHMENT AND DETECTION
A method of enriching nucleic acid, including mixing a sample with a solid phase extraction material; and separating the solid phase extraction material; wherein the solid phase extraction material is glass beads or magnetic beads modified with reduced graphene oxide. Also disclosed is a method of detecting nucleic acid, including mixing a nucleic acid sample enriched by the method above with a probe; and amplifying and detecting an amplification product by electrophoresis.
Compositions and Methods for Capturing Target Nucleic Acids
Capture mixtures and activated capture mixtures are provided that are useful for nucleic acid separation and purification are provided. The mixtures comprise lithium lauryl sulfate, lithium hydroxide, a zwitterionic sulfonic acid buffering agent, and optionally, proteinase K, capture probes comprising a first specific binding partner (SBP), and a second specific binding partner immobilized to a solid support. Related combinations, methods, uses, and kits, are also provided.
Compositions and Methods for Capturing Target Nucleic Acids
Capture mixtures and activated capture mixtures are provided that are useful for nucleic acid separation and purification are provided. The mixtures comprise lithium lauryl sulfate, lithium hydroxide, a zwitterionic sulfonic acid buffering agent, and optionally, proteinase K, capture probes comprising a first specific binding partner (SBP), and a second specific binding partner immobilized to a solid support. Related combinations, methods, uses, and kits, are also provided.
DEVICE, SYSTEM AND METHOD FOR ISOLATING A BIOLOGICAL MATERIAL
A device for isolating a biological material from a sample includes a housing, a slider and a dry reagent capsule. The housing defines a plurality of compartments and a plurality of fluid channels. Each compartment is configured to be fluidically connected to a respective fluid channel, and each fluid channel includes a respective end terminating at a track disposed on the housing. The slider is movable along the track and includes a plurality of connecting channels extending therethrough. A selected one of the connecting channels is configured to connect ends of selected ones of the fluid channels based on a position of the slider along the track. The dry reagent capsule is configured to be mounted to the housing, and includes at least one dry reagent for mixing with the sample. The dry reagent capsule is further configured to be fluidically connected to a respective fluid channel in-situ.
METHOD FOR ENRICHING MICROVESICLES
Microvesicles are enriched from a sample (for example exosomes) for subsequent isolation of biomolecules contained in the microvesicles, in particular RNA. A method involves: a) addition of an aqueous solution of salt of a polyuronic acid to the sample, b) addition of a substance which induces gel formation/pellet formation of the polyuronic acid, c) mixing of the sample and short incubation, d) centrifugation of the sample and removal of the supernatant, e) dissolving the pellet of gel piece, and 0 isolation of the biomolecules contained in the microvesicles, preferably RNA. Alginate is used as a preferred salt.