The invention relates generally to compositions and methods for detecting protease activity in a subject or a biological sample using activatable antibodies, and the use of these compositions and methods in a variety of diagnostic indications.

The present invention is methods and assays for identifying single proteins from a sample, without the use of affinity reagents. The methods and assays combine endopeptidase-based component of conventional peptide mapping with single molecule labeling and a microreactor array platform. The invention also includes kits for performing the methods and assays.

The present disclosure relates to methods for generating blood protein profiles from whole blood, red blood cell enriched blood samples, or red blood cell components. The methods involve the comparison of protein levels before and after incubation with protease inhibitors, or the comparison of protein levels after incubation in the presence and absence of protease inhibitors. The protein profiles are used for monitoring and diagnosing diseases and disorders in subjects including colorectal cancer and preeclampsia.

Embodiments of the present invention allow for verifying the destruction of cells by another party. The destruction of cells can be verified by generating a value of an indicator (e.g., a bar code), where the value depends on some feature of the destruction. The party destroying the cells provides the value of the indicator as evidence that the cells have been destroyed. Embodiments may include a method of verifying the destruction of a cell. The method may include running a medium including a dead cell through an assay using a system. Running the medium through the assay may generate a value of an indicator to signify that the assay has been run. The value may identify the system, the cell, or the destruction mode of the cell. The method may further include receiving a verification code to acknowledge that the value is valid.

[Problem] To provide a method that increases the detection level of a reaction product generated through a reaction between a glycoprotein and a carbohydrate-binding compound in order to detect the glycoprotein with high precision.

[Solution] A method for detecting a glycoprotein according to the present invention comprising the steps of: subjecting a sample containing the glycoprotein to a protease treatment; allowing the protease-treated glycoprotein to react with a sugar-binding compound having affinity with a glycan contained in the glycoprotein in order to obtain a reaction product between the glycoprotein and the sugar-binding compound; and detecting the reaction product. The sugar-binding compound is preferably a sugar-binding protein.

The disclosed technology relates to chemical entities for the detection of wounds, e.g., chronic wounds or infected wounds, including compositions, substrates, kits, dressing materials, and articles, and systems containing such compounds. The disclosed technology further relates to methods of using these compositions, kits and systems in diagnostic assays, and in the diagnosis and/or detection of chronic or infected wounds based on enzymatic action on specific moieties and/or reaction sites. The disclosed technology additionally relates to detection of pathogenic, e.g., bacterial and/or viral substances, such as enzymes and substrates, at the wound situs. Additional disclosure relates to methods of characterizing wounds based on expression of a plurality of markers and using such information to treat, manage, and follow-up patients suffering from chronic or infected wounds.

A four-biomarker panel for diagnosis of chronic graft-versus-host disease (cGVHD) and methods of prognosing and/or diagnosing cGVHD using the biomarker panel are disclosed.

Provided are methods of identifying, visualizing and purifying proteases from a complex biological sample.

The present disclosure provides methods in which adherent cells are treated with small molecules, cultured, lysed, and then analyzed by mass spectrometry to measure the activities of endogenous enzymes. The implementation of this method relies on the use of surfaces that are nanopatterned with cell adhesion ligands to mediate cell attachment and a peptide that is a substrate for the desired enzyme activity in the lysate.

The present invention, in some aspects, provides methods, reagents, compositions, and kits for the radiolabeling of proteins, for example, of proteins useful for positron emission tomography (PET) or single-photon emission computed tomography (SPECT) (e.g., for diagnostic and therapeutic applications), using sortase-mediated transpeptidation reactions. Some aspects of this invention provide methods for the conjugation of an agent, for example, a radioactive agent or molecule to diagnostic or therapeutic peptides or proteins. Compositions comprising sortagged, radiolabeled proteins as well as reagents for generating radiolalebed proteins are also provided. Kits comprising reagents useful for the generation of radiolabeled proteins are provided, as are precursor proteins that comprise a sortase recognition motif.