The present application discloses a plurality of embodiments and associated inventions, with respect to microfluidic systems for at least one of identifying, imaging, orientating, and sorting particles, in particular, biological cells, and more particularly, X and Y sperm cells. In some embodiments, a module system with functional connectors is provided, each module being connected by a connector that can provide additional functionality aside from enabling fluid flow between modules. The present disclosure also is directed to microfluidic systems which include particle delivery tubes configured to orient particles (e.g., X and Y sperm cells), as well as microfluidic systems for generating a static, spatial patterns within the microfluidic channel.

Current state of the art in microfluidic pumping, single cell labelling, mixing, emulsification, incubation, optical excitation, reading and sorting component technology is presented. This is followed by the description of the invention, that fuses these components into a single system, available in four configurations, characterised by three structural and functional innovations. The first unique feature is intra and inter parallel architecture enabling fast, high-throughput, flexible and scalable single cell reading and sorting. Second—dual, laser-enabled detection of information, both fluorescent-genetic and visual-morphological; and its combination and processing using machine learning algorithms. Third—novel mixing, incubation and reading-sorting component structure.

This disclosure provides photonic integrated chip that has an optical waveguide located on a photonic circuit substrate that includes a photonic circuit that is optically coupled to the waveguide. A microfluidic channel is in a silicon substrate and is attached to the photonic circuit substrate. The microfluidic channel is positioned over the optical waveguide such that its side surfaces and an outermost surface extend into the microfluidic channel. The microfluidic channel extends along a length of the optical waveguide, and nanoparticles are located on or adjacent the optical waveguide located within the microfluidic channel.

Apparatuses and methods are described for the use of optically driven bubble, convective and displacing fluidic flow to provide motive force in microfluidic devices. Alternative motive modalities are useful to selectively dislodge and displace micro-objects, including biological cells, from a variety of locations within the enclosure of a microfluidic device.

Systems, methods, compositions of matter, and kits for undermedia repellency are disclosed. In some cases, these involve a first volume of a first liquid presented in a second volume of a second liquid above a first location of a first surface. The first liquid, second liquid, and first location can have properties sufficient to give rise to undermedia perfect liquid repellency.

Characteristics of polarizable particles in a fluid are detected using an optical cavity comprising opposed optical reflectors containing the fluid. A particle is introduced through the fluid into the optical cavity. The particle may be transiently in the cavity or optically trapped. The optical cavity containing the particle is illuminated with light that excites resonance of an optical mode of the optical cavity that is affected by the particle. A measurement of a parameter of the excited resonance is derived, for example while tuning through the resonance. Repeated measurements may be used to derive a measure of a characteristic of the particle that is dependent on the motion of the particle in the optical cavity.

A method of designing a nano-structured optical device includes: selecting a first nanoscale building block from a finite set of types of building blocks; placing the first nanoscale building block at a position and orientation in a three-dimensional optical device structure; optimizing the position, orientation, and type of the first nanoscale building block to obtain a preselected optical effect based on optical scattering from the first nanoscale building block; selecting a second nanoscale building block from the finite set of types of building blocks; placing the second nanoscale building block at a position and orientation in the three-dimensional optical device structure along with the first nanoscale building block; and optimizing the positions, orientations, and types of the first and second nanoscale building blocks to obtain the preselected optical effect based on optical scattering from the first and second nanoscale building blocks.

Functional assays using reporter cell assays are described which probe the activity of at least one cell of interest. The ability to probe at least one cell is provided by using the microfluidic methods, devices and kits described herein. Assays combining both reporter cell signaling as well as binding assay signaling for at least one cell is also described herein.

A flow cell is provided that includes surface-attached structures in a chamber. The structures are movable in response to a magnetic or electric field. A target extraction or isolation system includes the flow cell and a driver configured for applying a magnetic or electric field to the interior of the flow cell to actuate movement of the structures. The flow cell may be utilized to extract or isolate a target from a sample flowing through the flow cell. Further, a microfluidic system is provided that includes surface-attached structures and a microarray, wherein actuated motion of the surface-attached structures is used to enhance flow, circulation, and/or mixing action for analyte capture on the microarray.

A system for orienting particles in a microfluidic system includes one or more radiation pressure sources arranged to expose particles to radiation pressure to cause the particles to adopt a particular orientation in the fluid. A system for sorting particles in a microfluidic system includes a detection stage arranged to detect at least one difference or discriminate between particles in the fluid flow past the detection stage, and one or more radiation pressure sources past which the particles move sequentially and a controller arranged to switch radiation energy to cause a change in direction of movement of selected particles in the fluid flow to sort the particles. The particles may be biological particles such as spermatazoa. The radiation pressure may be optical pressure and may be from one or more waveguides which may extend across a channel of the microfluidic system.