Bioreactors are disclosed that include a vessel, a jet mixing system comprising a plurality of jet flow agitators disposed in the vessel, each jet flow agitator comprising a shaft, a shroud surrounding the shaft, the shaft having a bore and a plurality of orifices in communication with the bore, and an impeller mounted on the shaft within the shroud, and a gas delivery system configured to supply a process gas to the vessel through the bore such that the gas exits the orifices. The vessel may include a vent, and the gas delivery system may include a source of oxygen in communication with the vessel, an oxygen monitor configured to monitor the oxygen content of a liquid in the vessel, and a controller configured to adjust the oxygen content of the liquid, using the vent and oxygen source, in response to input from the oxygen monitor.

A method and apparatus for injecting a gas into a liquid in which a rotating helical impeller within a draft tube submerged in the liquid creates a liquid flow within the draft tube. Gas bubbles are injected into the draft tube either above or below or alongside the helical impeller or in all three locations. The liquid is drawn into the draft tube with a superficial velocity greater than a substantially uniform terminal ascent velocity of the gas bubbles to allow entrainment of undissolved gas bubbles in the bulk liquid into the liquid being drawn into the draft tube. The gas bubbles are injected with a uniform diameter of between about 10.0 microns and about 1.0 millimeters. The small bubble size enhances the dissolution of the gas into the liquid and also allow the entrainment of the gas into the liquid being drawn into the draft tube.

A method and apparatus for injecting a gas into a liquid in which a rotating helical impeller within a draft tube submerged in the liquid creates a liquid flow within the draft tube. Gas bubbles are injected into the draft tube either above or below or alongside the helical impeller or in all three locations. The liquid is drawn into the draft tube with a superficial velocity greater than a substantially uniform terminal ascent velocity of the gas bubbles to allow entrainment of undissolved gas bubbles in the bulk liquid into the liquid being drawn into the draft tube. The gas bubbles are injected with a uniform diameter of between about 10.0 microns and about 1.0 millimeters. The small bubble size enhances the dissolution of the gas into the liquid and also allow the entrainment of the gas into the liquid being drawn into the draft tube.

Biomass feedstocks (e.g., plant biomass, animal biomass, and municipal waste biomass) are processed to produce useful products, such as fuels. For example, systems are described that can convert feedstock materials to a sugar solution, which can then be fermented to produce ethanol. Biomass feedstock is saccharified in a vessel by operation of a jet mixer, the vessel also containing a fluid medium and a saccharifying agent.