VACCINE COMPRISING BETA-HERPESVIRUS
20170274057 · 2017-09-28
Inventors
Cpc classification
C12N2710/16121
CHEMISTRY; METALLURGY
C12N7/00
CHEMISTRY; METALLURGY
C12N2760/16134
CHEMISTRY; METALLURGY
C12N2710/16143
CHEMISTRY; METALLURGY
A61K39/00
HUMAN NECESSITIES
C12N2710/16134
CHEMISTRY; METALLURGY
Y02A50/30
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
C12N2740/16234
CHEMISTRY; METALLURGY
C12N7/045
CHEMISTRY; METALLURGY
C12N2760/18534
CHEMISTRY; METALLURGY
International classification
A61K39/00
HUMAN NECESSITIES
C12N7/04
CHEMISTRY; METALLURGY
C12N7/00
CHEMISTRY; METALLURGY
Abstract
The present invention relates to a beta-herpesvirus, preferably a recombinant beta-herpesvirus, wherein the beta-herpesvirus comprises at least one heterologous nucleic acid, wherein the at least one heterologous nucleic acid comprises a gene encoding a cellular ligand.
Claims
1-30. (canceled)
31. A beta-herpesvirus, wherein the beta-herpesvirus comprises at least one heterologous nucleic acid, wherein the at least one heterologous nucleic acid comprises a gene encoding a cellular ligand, wherein the cellular ligand is a Natural Killer group 2, member D (NKG2D) ligand and the beta-herpesvirus is attenuated in vivo.
32. The beta-herpesvirus according to claim 31, wherein the cellular ligand is capable of binding a receptor for the cellular ligand wherein the receptor for the cellular ligand is present on the surface of at least one immune cell, and wherein the at least one immune cell is selected from the group consisting of NK cells, γδ T cells and activated CD8+ T cells.
33. The beta-herpesvirus according to claim 31, wherein the NKG2D ligand is a human NKG2D ligand selected from the group consisting of UL16 binding proteins and MHC class-I-related protein.
34. The beta-herpesvirus according to claim 33, wherein the UL16 binding protein is selected from the group consisting of UL16 Binding Protein 2 (ULBP2), UL16 Binding Protein 1 (ULPB1), UL16 Binding Protein 3 (ULBP3), UL16 Binding Protein 4 (ULBP4), UL16 Binding Protein 5 (ULBPS) and UL16 Binding Protein 6 (ULBP6).
35. The beta-herpesvirus according to claim 33, wherein the MHC class-1-related protein is selected from the group consisting of MICA and MICB.
36. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus is suitable for inducing an immune response against a beta-herpesvirus, wherein the immune response comprises neutralizing antibodies against beta-herpesvirus and/or CD4+ T-cells directed against epitopes of beta-herpesvirus and/or CD8+ T-cells directed against epitopes of beta-herpesvirus.
37. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus is human cytomegalovirus.
38. The beta-herpesvirus of claim 31, wherein the beta-herpesvirus is deficient in at least one gene product encoded by an immune modulatory gene.
39. The beta-herpesvirus according to claim 38, wherein the at least one gene product is selected from the group consisting of UL16 and UL142 or homologs thereof.
40. The beta-herpesvirus according to claim 38, wherein the beta-herpesvirus is deficient in one or more additional gene product(s) each encoded by an additional immune modulatory gene.
41. The beta-herpesvirus according to claim 40, wherein the at least one additional gene product is selected from the group consisting of UL16, UL18, UL40, UL142, m152, m155, m145 and m138, or homologs thereof.
42. The beta-herpesvirus of claim 40, wherein the at least one additional gene product encoded by the the additional immune modulatory gene is a gene product regulating MHC class I presentation, wherein the gene product regulating MHC class I presentation is a gene product encoded by an immune modulatory gene selected from the group consisting of US6, US3, US2 and US11.
43. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus comprises the deletion of at least one miRNA.
44. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus is deficient in at least one gene product encoded by a gene regulating viral replication, wherein the gene regulating viral replication is selected from the group consisting of IE1, pp71 and pp65.
45. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus is deficient in at least one gene product encoded by an essential gene, wherein the essential gene is selected from the group consisting of UL32, UL34, UL37.1, UL44, UL46, UL48, UL48, UL49, UL50, UL51, UL52, UL53, UL54, UL55, UL56, UL57, UL60, UL70, UL71, UL73, UL75, UL76, UL77, UL79, UL80, UL84, UL85, UL86, UL87, UL89.1, UL90, UL91, UL92, UL93, UL94, UL95, UL96, UL98, UL99, UL100, UL102, UL104, UL105, UL115 and UL122.
46. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus is deficient in at least one glycoprotein.
47. The beta-herpesvirus according to claim 31, wherein the beta-herpesvirus encodes at least one additional heterologous nucleic acid.
48. The beta-herpesvirus according to claim 47, wherein the at least one additional heterologous nucleic acid is a functional nucleic acid selected from the group consisting of antisense molecules, ribozymes and RNA interference mediating nucleic acids or wherein the at least one additional heterologous nucleic acid is a heterologous nucleic acid coding for a peptide, oligopeptide, polypeptide or protein.
49. The beta-herpesvirus according to claim 48, wherein the peptide, oligopeptide, polypeptide or protein constitutes or comprises at least one antigen, wherein the antigen is an antigen selected from the group consisting of tumor antigens, tumor associated antigens, viral antigens, bacterial antigens and parasite antigens.
50. The beta-herpesvirus according to claim 49, wherein the viral antigen is an antigen derived from a virus, wherein the virus is selected from the group consisting of HIV, Influenza, HPV and RSV.
51. The beta-herpesvirus according to claim 49, wherein the bacterial antigen is an antigen derived from a bacterium, wherein the bacterium is selected from the group consisting of mycobacterium, Helicobacter pylori and Listeria.
52. The beta-herpesvirus according to claim 49, wherein the parasite antigen is an antigen derived from a parasite, wherein the parasite is selected from the group consisting of Plasmodium.
53. A method for the treatment or prevention of a disease comprising administering to a subject the beta-herpesvirus according to claim 31.
54. The method according to claim 53, wherein the disease is a disease or condition which is associated with beta-herpesvirus infection.
55. The method according to claim 53, wherein the disease is a disease selected from the group consisting of bacterial disease, viral disease, parasite disease and tumors, wherein the beta-herpesvirus is expressing a bacterial antigen, a viral antigen, a parasite antigen or a tumor antigen.
56. A method for the vaccination of a subject against a disease, comprising the administration to the subject of the beta-herpesvirus according to claim 31.
57. A nucleic acid coding for a beta-herpesvirus as defined in claim 31.
58. An expression vector, comprising the nucleic acid according to claim 57.
59. A pharmaceutical composition comprising a beta-herpesvirus according to claim 31 and/or a nucleic acid according to claim 28, and a pharmaceutically acceptable carrier.
Description
[0350] The present invention is now further illustrated by the following figures and examples from which further features, embodiments and advantages of the present invention may be taken.
[0351] More specifically,
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EXAMPLES
Example 1
Materials and Methods
General Laboratory Reagents and Equipment
[0424] Materials and reagents which used in the present application are listed in Table 1.
[0425] The laboratory equipment used in the present application is listed in Table 2.
TABLE-US-00002 TABLE 1 Materials and reagents. REAGENTS DISTRUBUTOR NAME αB220 clone PA3-6B2 eBioscience αCD3 clone SP7 Abcam αCD3 clone 145-2C11 eBioscience αCD8 clone 53-6.7 eBioscience αCD11c clone N418 eBioscience αCD11b clone M1/70 eBioscience αCD27clone LG.7F9 eBioscience αCD44 clone IM7 eBioscience αCD62L clone MEL-14 eBioscience αCD69 clone H1.2F3 eBioscience αCD127 clone A7R34 eBioscience αIFNg cloneXMG1.2 eBioscience αKLRGclone 1 2F1 eBioscience αMHCII clone M5/114.15.2 eBioscience αNKp46 clone 29A1.4 eBioscience αPD-1 clone J43 eBioscience αTNFa clone MP6-XT22 eBioscience Acetic acid (glacial) BDH AEC staining kit Sigma-Aldrich Co. Agarose Carl Roth Amminium chloride Kemika Ampicillin EMD Chemicals Inc. Arabinose Carl Roth Aquatex Merck 2-mercaptoethanol Invitrogen - Gibco Cell Culture Systems Bacto Agar Carl Roth Biotin blocking system Dako Brain heart infusion (BHI) broth Difco Laboratories Boric acid Carl Roth Brefeldin A eBioscience Bovine serum albumine (BSA) Carl Roth Chloramphenicol EMD Chemicals Inc. Chloroform EMD Chemicals Inc Defibrinated sheep blood Biognost d.o.o. DMEM (Dulbecco's Modified Pan Biotech GmbH Eagle Medium) DMSO Sigma-Aldrich Co. dNTPs Hoffmann-La Roche Ltd EDTA Carl Roth Eosin Thermo Scientific Ethanol T.T.T. d.o.o. Ethidium bromide BDH Foetal Bovine Serum Pan Biotech GmbH Gel loading buffer 10X Blue Juice Invitrogen Glucose Carl Roth Glycerol EMD Chemicals Inc. Hematoxillin Thermo Scientific Hydrocloric acid, 37% Carlo Erba Reagents Isoamyl alcohol BDH Isopropanol EMD Chemicals Inc. Kanamycin EMD Chemicals Inc. L-Glutamin Invitrogen - Gibco Cell Culture Systems MEM 10x Invitrogen - Gibco Cell Culture Systems Methanol T.T.T. d.o.o. Methylcellulose Sigma-Aldrich Co. mi 100 bp DNA marker GO Ladder Metabion mi 1k bp DNA marker GO Ladder Metabion Nutrient agar with NaCl Biolife Paraformaldehyde Sigma-Aldrich Co. Penicillin/Streptomycin Pan Biotech GmbH Phenol EMD Chemicals Inc. PBS-Buffer Dulbecco Pan Biotech GmbH (Phosphate Buffered Saline) Potassium acetate Carl Roth Potassium hydrogen carbonate Kemika QIAquick PCR purification kit Qiagen Inc QIAplasmid MIDI kit Qiagen Inc Restriction enzymes New England Biolabs, Inc. RPMI Pan Biotech GmbH Saponin, from quillaja bark Sigma-Aldrich Co. Sodium azide Sigma-Aldrich Co. Sodium chloride Kemika Sodium dihydrogen phosphate 12-hydrate Kemika Sodium dodecyl sulfate BDH Sodium hydroxide Kemika Streptavidin eBioscience Sucrose Carl Roth SuperFect Transfection Reagent Qiagen Inc. Tris base Carl Roth Trypan Blue Stain Invitrogen Trypsin-EDTA 10X Invitrogen - Gibco Cell Culture Systems Xylene T.T.T.d.o.o.
TABLE-US-00003 TABLE 2 Laboratory equipment. LABORATORY EQUIPMENT DISTRIBUTOR NAME BD Facs Aria Cell Sorter BD Biosciences Biofuge 13 microcentrifuge Thermo Electron Corporation - Heraeus Bottle Top filters TPP Techno Plastic Products Cell culture dish Orange Scientific Centrifuge C412 Jouan Centrifuge 5417R Eppendorf Centrifuge tubes Beckman CO2 Incubator 3326 Heraeus DNA engine Peltier thermal cycler Bio-Rad Laboratories Ltd. Electroporation cuvettes Gene Pulser, BIORAD Eppendorf Thermomixer Eppendorf Gene pulser II electroporator Bio-Rad Laboratories Ltd. Horizontal Gel Electrophoresis System Owl Separation Systems Incubator B6 Heraeus JA-10 rotor Beckman Coulter Canada, Inc. J2-MI highspeed centrifuge Beckman Coulter Canada, Inc. Microscope slides Carl Roth Microscope Olympus CK2 Olympus Microscope Olympus BX51 Olympus Pipettes Gilson Syringe filters TPP Techno Plastic Products Thermo Biomate 3 spectrophotometer Thermo Electron Corporation Transilluminator UV HVD Life Sciences Water bath Kottlermann Labortechnik
[0426] 2.4G2 supernatant (Fc block), aCD8, aCD4 and aNKG2D antibodies were produced at the Center for Proteomics, Faculty of Medicine, University of Rijeka.
[0427] Peptides IE1/m123 (.sub.168YPHFMPTNL.sub.176; SEQ. ID. NO: 1), also known as a pp89 derived peptide, m164 (167AGPPRYSRL75; SEQ. ID. NO: 2)-peptide [and .sub.91GYKDGNEYI.sub.99 (SEQ. ID. NO: 3) were synthesized by JPT Peptide Technologies, Germany. Tetramers were provided by NIH Tetramer Facility.
Buffers and Solutions
[0428] 0.1M Citrate Buffer pH 5.5
[0429] Solution A: 21.01 g 0.1M citric acid in 1L of distilled water.
[0430] Solution B: 35.81 g 0.1M Na2HPO4×12H20 in 1 L of distilled water.
[0431] Solutions A and were mixed in 1:1 ratio and titrated with citric acid or disodium hydrogen phosphate solution for pH adjustment.
[0432] DNA Isolation Buffers:
[0433] Buffer I: 50 mM glucose; 10 mM EDTA; 25 mM TRIS pH 8.0
[0434] Buffer II: 0.2 M NaOH; 1% SDS;
[0435] Buffer III: 3 M potassium acetate;
[0436] Buffer I was autoclaved before usage. Buffers I and III were used ice-cold. The same stock solution can be used for one month if stored at 4° C. Buffer II was always prepared fresh prior to mini prepration.
[0437] 10×Lysing Solution
[0438] For 1L:
[0439] 89.9 g NH4Cl; 10 g KHCO3; 0.370 g EDTA
[0440] pH was adjusted to 7.3, solution was sterile filtered and stored at 2-8° C.
[0441] FACS Medium
[0442] 1L PBS; 0.1% NaN3; 1% BSA
[0443] 4% PFA pH 7.2
[0444] For 1L:
[0445] 40.0 g paraformaldehyde; 5-10 g NaOH; PBS buffer
[0446] PBS was heated to 60° C. in water bath. Paraformaldehyde was added and solution was mixed 1-2 h on magnetic stirrer. pH was adjusted to 7.2, PBS was added up to 1 L and solution was filtered.
[0447] 2% PFA pH 7.2
[0448] 2% PFA pH 7.2 was prepared by 2× dilution of 4% PFA pH 7.2 in PBS.
[0449] TBS Buffer
[0450] 200 mL 1M TrisHCl pH 7.5 (121.14 g Tri sin 1 L od distilled water, add concentrated HCl)
[0451] 300 mL 1M NaCl (58.44 g in 1 L distilled water add aqua up tp 2L
[0452] Trypanblue:
[0453] 4.0 g of trypanblue dye was dissolved in u 100 mL PBSa in dark bottle. After 5-7 days at +4° C. solution was filtered.
[0454] Trypsin/EDTA
[0455] Trypsin/EDTA solution diluted 1:10 with PBS was used.
[0456] Final concentration: 0.5 g/l trypsin, 0.2 g/l EDTA, pH 7 0.4 to 7.6.
[0457] Virus Suspension Buffer (VSB)/ 15% (w/v) Sucrose:
[0458] 50mM Tris-HCl; 12 mM KCl; 5 mM Na.sub.2EDTA; 15% sucrose
Cell Culture Media
[0459] Foetal Bovine Serum (FCS)
[0460] FCS was before usage decomplemented by heating at 56° C. in water bath for 1 h.
[0461] 3% DMEM (Dulbecco's Modified Eagle Medium)
[0462] 500 mL DMEM; 3% (v/v) FCS; 100 U/ml Penicillin; 0.1 mg/ml Streptomycin
[0463] 5% RPMI
[0464] 500 mL RPMI; 3% (v/v) FCS; 500 mL 2-mercaptoethanol; 100 U/ml Penicillin; 0.1 mg/ml Streptomycin
[0465] 10% RPMI
[0466] 500 mL RPMI; 3% (v/v) FCS; 500 mL 2-mercaptoethanol; 100 U/ml Penicillin; 0.1mg/ml Streptomycin
[0467] Methyl Cellulose
[0468] Methyl cellulose was prepared according to manufacturer instructions.
[0469] In a glass bottle, 8.8 g methyl cellulose and 0,88 g NaHCO3 was added in 350 mL of distilled water, left for 10 days in the fridge to dissolve (with periodically shaking) and autoclaved afterwards at 121° C. for 20 mM 40 mL of 10× MEM, 2 mM L-glutamine, 100 U/ml penicillin, 0.1 mg/ml streptomycin, 5% (v/v) FCS was added while stirred on magnetic stirrer. It was stored at 4° C.
[0470] PBS-Buffer Dulbecco
[0471] (Phosphate Buffered Saline):
[0472] 140 mM NaCl; 2.7 mM KCl; 6.5 mM Na2PO4; 1.5 mM KH2PO4, (pH 7.4)
Bacteria Culturing Media
[0473] Nutrient Agar
[0474] Nutrient agar with NaCl was prepared according to manufacturer instructions. 28 g of agar was dissolved in 1000 mL of distilled water and autoclaved for 15 mM at 121° C. In cooled agar 50 mL of blood agar was added and plated in sterile Petri dish.
[0475] LB Media
[0476] 10.0 g Bacto-Tryptone; 5.0 g Bacto-yeast extract; 10.0 g NaCl; ddH2O up to 1L
[0477] LB Plates
[0478] 10.0 g Bacto-Tryptone; 5.0 g Bacto-yeast extract; 10.0 g NaCl; 15.0 g Bacto-agar; ddH2O up to 1L
[0479] LB media was autoclaved and cooled to 55° C. Appropriate antibiotics were added and media was plated in sterile bacteria culture plates.
Cells and Viruses.
[0480] Mouse embryonic fibroblasts, also referred to herein as MEFs, SVEC4-10 (ATTCC no. CRL-2181), NIH 3T3 (ATCC CRL-1658) and B12 fibroblasts (Del Val, M. et al., 1991, Cell 66(6):1145-53), were grown as described in Jonjic et al. (Jonjic, S. et al., 2008, Methods Mol Biol 415:127-149). MCMV, MW97.01, derived from a bacterial artificial chromosome, also referred to herein as BAC, has previously been shown to be biologically equivalent to the MCMV Smith strain (VR-194 [reaccessioned as VR-1399]; American Type Culture Collection) and is also referred to herein preferably as WT-MCMV. The recombinant strain Δm152-MCMV was generated as described by Wagner et al. (Wagner, M. et al., 1999, J Virol 73(8):7056-60; Wagner, M. et al., 2002, J Exp Med 196(6):805-16). Viruses were propagated on MEFs and concentrated by sucrose gradient ultracentrifugation as described by Jonic et al. (Jonjic, S. et al., 2008, supra). Salivaary gland derived MCMV, also referred to herein preferably as SGV MCMV, was used as a third passage and prepared as described by Jonjic et al. (Jonjic, S. et al., 2008, supra).
[0481] Cell culture techniques were performed using a sterile cabinet, as well as sterile glass and plastic material. For the cultivation of cells CO.sub.2-incubators providing the following conditions, namely 37° C., 5% CO.sub.2 (v/v) and a saturated water vapor atmosphere (95% (v/v) relative humidity), were used.
[0482] For determining cell numbers, a cell suspension was mixed with trypan blue dye and transferred into a Neubauer-counting chamber. The cell number was determined according to the following formula I:
CN/ml=N/n×V×10.sup.4.sub.(I),
wherein CN means cell number, N means number of counted cells, n means number of large squares counted, and V means dilution factor, and wherein the chamber factor is 10.sup.4.
Preparation of MEF
[0483] MEFs were isolated from 17 days old mouse embryos. The embryos were removed from a pregnant mouse and minced in a Petri dish using scissors. Tissue fragments were rinsed with PBS and transferred to a 500 mL Erlenmeyer flask. After addition of 30 mL trypsin solution the flask was stirred at 37° C. for 30 min Additional 30 mL of trypsin solution and 10 mL of PBS wad added and stirred at 37° C. for 30 min two more times. Cell suspension was filtered through gauze and centrifuged 10 min at 1200 rpm and room temperature. Cells were resuspended in warm 3% DMEM, plated and grown till they reached confluency, which approximately occurs within 2 to 3 days. After expansion of cells, aliquots thereof can be frozen and stored at −80° C. or used.
Production of Electrocompetent Bacterial Cells
[0484] 5 mL of LB broth medium containing 17 μg/mL chloramphenicol was inoculated with the BAC containing bacteria (E. coli DH10B) and incubated overnight at 37° C., with minimum shaking of approximately 200 rpm. 4 mL of the resulting overnight culture were transferred into two 2 mL microcentrifuge tubes and cells were pelleted by centrifugation at 16000 g at 2° C. for 30 seconds.
[0485] To obtain highly electrocompetent cells, the procedure was performed on ice with prechilled solutions and microcentrifuge tubes. The Pellet resulting from the centrifugation step was resuspended in 1 mL of ice-cold sterile ddH2O by gentle pipetting. Cells were centrifuged at 16000 g at 2° C. for 30 seconds and the resulting pellet was resuspended in 1 mL of ice-cold sterile ddH.sub.2O. Cells were centrifuged at 16000 g at 2° C. for 30 seconds and the resulting pellet pellet was resuspended in 500 μL of ice-cold sterile 10% glycerol (v/v). Cells were pooled in one microcentrifuge tube and centrifugation was carried at 16000 g for 60 seconds at 2° C. The resulting supernatant was discarded using a pipette and the pellet containing the bacterial cells was resuspended in 100 μL of ice-cold sterile 10% glycerol (v/v). Aliquots were snap-frozen in liquid nitrogen. Cells were stored as 50 μL aliquotes at -80° C.
Electrotransformation
[0486] E. coli DH10B cells were electroporated with the respective MCMV BAC-plasmid to introduce the plasmid pKD46, which encodes the recombination enzymes, and to excise kanamycin cassette from the MCMV BAC-genome by the electroporation of pCP20 (Borst E M et al., Curr Protoc Immunol. 2007 May; Chapter 10: Unit 10.32).
[0487] An aliquot of electrocompetent bacteria was thawed on ice and 5 ng of plasmids and approximately 300 ng of PCR product was added. Electroporation was performed in pre-cooled electroporation cuvettes at 2.5 kV, 200Ω and 25 μF. Subsequent to the electroporation step, 500 μl LB-medium was added to the bacteria and the such obtained culture was incubated for 1 h at 300 rpm in a thermo-shaker at 30° C. after electroporation with pCP20, or 37° C. after electroporation with pKD46 or PCR product, respectively. After incubation, bacterial cells were plated on LB agar plates containing appropriate antibiotics, according to selection marker present in the plasmids or PCR products and incubated at 30° C. over night.
Induction of Expression of Red Genes from pKD46
[0488] After electroporation of pKD46 μlasmid into bacterial cells containing the respective MCMV-BAC, a single colony was inoculated in 5 mL of LB medium containing 17 μg/mL chloramphenicol and 50 μg/mL ampicillin and such obtained culture was incubated at 30° C. and 200 rpm overnight. Such obtained overnight culture was than diluted 1:40 into 100 mL of LB medium containing 17 μg/mL chloramphenicol and 50 μg/mL ampicillin and incubated at 30° C. and 200 rpm for 3 h, or until OD600 nm reached 0.5-0.6. Expression of recombination enzymes was induced by adding 1 mL of freshly prepared 10% arabinose solution (w/v) (final concentration 0.1%) and incubation for 1 h at 30° C. and 200 rpm. Cells were then made electrocompetent as described herein.
Isolation of Viral DNA from Viral Particles
[0489] To isolate DNA from MCMV particles, the supernatant of infected mouse embryonic fibroblasts was used. MEFs were grown in 3% DMEM in 10-cm cell culture dish to 90% confluence and were infected with the supernatants from transfected cells at multiplicity of infection (MOI) of 0.1. Incubation was carried at 37° C. and 5% CO.sub.2 until complete cytopathic effect was observed, usually 5 to 6 days post infection. Supernatants were harvested and virions released in the supernatants were pelleted by ultracentrifugation for 1 h at 100 000 g at 4° C. Pellets were re-suspended in 500 μL of 50 mM TRIS-HCl pH 8.0/1 mM MgCl.sub.2/100 μg/mL BSA, 100 U of Benzonase was added and incubated for 1 h. To inactivate Benzonase, 20 μL of 0.5 M EDTA was added. Virions were lysed by addition of 500 μL of 1% SDS. Capsid proteins were digested by 20 μL of proteinase K (500 ng/mL). Following 3 h of incubation at 56° C., the viral DNA was purified by phenol/chloroform extraction. One volume of phenol/chlorophorm was added to sample containing viral DNA and centrifugation for 5 minutes at 16000 g was performed. The resulting upper aqueous phase containing viral DNA was transferred to a new tube using pipettes with pipette tips with cut-off ends. To assure purity of viral DNA, 1 μL of glycogen solution (35 μg/ pL) and 1/10 volume of 3 M sodium acetate pH 5.2 was added. DNA was precipitated with 0.7 volume of isopropanol. DNA was pelleted with centrifugation (30 minutes, 16000 g, 4° C.). Supernatant was discarded and pellet washed in 1 mL of 70% ethanol. Pellet was than air-dried and dissolved in 100 μL TE buffer for 2 h at 37° C. Viral DNA was analyzed by restriction analysis.
Long Mini-Preparation of BAC::MCMV DNA
[0490] 10 mL of LB medium with appropriate antibiotic was inoculated with a single bacterial colony. For verification of right clone constructs, for every mutant 10 positive clones were analyzed. Bacterial cultures were grown for 18 h at 37° C. at 200 rpm. 500 μL of overnight culture was stored at 4° C. for potential large scale preparation (midi-preparation). The rest of the culture was centrifuged at 4000 rpm at 4° C. for 10 minutes. Pellet was re-suspended in 200 μl of ice-cold buffer I. The alkaline lysis was accomplished by adding 300 μl of buffer II. After addition of buffer II sample was mixed gently by inverting the tube and then was incubated for 5 min at room temperature. After addition of 300 μl ice-cold buffer III, followed by incubation for 10 min on ice were SDS, chromosomal DNA and protein components precipitated. The precipitated components were in the lower phase after centrifugation at 13200 rpm (16,000×g) and 4° C. for 5 minutes. Supernatant containing DNA was transferred into a new tube and DNA was precipitated with 0.7 volume of isopropanol. Sample was centrifuged at 13200 rpm (16,000×g) and 4° C. for 30 minutes. Pellet was washed with 800 μL of 70% ethanol, air-dried and dissolved in the 100 μL of TE buffer that contained RNase (50 ng/ml) for 30 minutes at 37° C. at minimum shaking (300 rpm) in a thermomixer. The DNA was analyzed by restriction analysis and stored at 4° C.
Construction of Recombinant Plasmids and Recombinant Viruses.
[0491] To generate MCMV expressing RAE-1γ, i.e. RAE-1γMCMV, an ORF encoding FLAG-tagged RAE-1γ was first cloned into the plasmid pGL3 (Invitrogen) together with a kanamycin resistance gene (kanR), which was inserted further downstream. Then, the RAE-1γ expression cassette and kanR were PCR amplified using the primers 5′-gcacccgacgatctgacattgtecagtgtgccggtegcacgaacatccctagttattaatagtaatc-3′ (SEQ. ID. NO: 4) and 5′-tgtcaccgctccacgutcaccgteggtacccgatcgctagcctgtacacaggaacacttaacggctga-3′ (SEQ. ID. NO: 5), which contained 50 nucleotides at their 5′-ends homologous to the intended integration site in the BAC-cloned MCMV genome. The PCR fragment was integrated into the BAC by reda, -β, -γ mediated recombination as described by. Borst et al, 2007 (Borst E M et al., Curr Protoc Immunol. 2007 May; Chapter 10: Unit 10.32.), thereby in accordance with homology chosen for the intended integration site replacing the m152 ORF. The kanR cassette was subsequently excised with FLP recombinase (Borst et al., 2007, supra). The resulting MCMV BAC was characterized by restriction analysis and virus RAE-1γMCMV was reconstituted by transfection of the BAC DNA into MEF.
Construction of MCMVList and RAE-1γMCMVList
[0492] The Dd-restricted antigenic m164 peptide .sub.167AGPPRYSRI.sub.175 (SEQ.ID.NO:2) of the genome of MCMV strain RAE-1γMCMV and of WT-MCMV was replaced with the Kd-restricted listeriolysin O (LLO)-derived peptide .sub.91GYKDGNEYI.sub.99, also referred to herein preferably as List (SEQ.ID.NO:3), by using the shuttle plasmid pST76K-m164_List as described by Lemmermann et al. (Lemmermann et al., 2010, J Virol. 84(3):1221-36).
[0493] The primers used were List swap fw_1:
TABLE-US-00004 (SEQ.ID.NO: 6) 5′-gactactgtcggacgtggggcgctgacaatatattcatttccat ctttgtaaccAGGATGACGACGATAAGTAGGG-3′, List swap fw_2: (SEQ.ID.NO: 7) 5′-gatcgagccggtggtaccggacgcggcggagccgttcggaaagg actactgtcggacgtggggcgctgac-3′, List swap rv_1: (SEQ.ID.NO: 8) 5′-Ggttacaaagatggaaatgaatatattgtcagcgccccacgtcc gacagtagtcCAACCAATTAACCAATTCTGATTAG-3′ and List swap rv_2: (SEQ.ID.NO: 9) 5′-atggcctggttgttgacggcccagaagatgcgcgagtaccgagg agggcccgcggttacaaagatggaaatgaatatatt-3′,
wherein lower case letters represent homology region to m164 ORF in the MCMV genome, lowercase letters in bold and underlined represent the region coding for peptide .sub.91GYKDGNEYI.sub.99—List (SEQ. ID. NO: 3) and capital bold letters represent homology to Tischer kanamycin resistance cassette (Tischer, B. K. et al, 2006, supra). PCR was performed with the following cycler conditions:
[0494] An initial step for 5 min at 95° C. for activation of Phusion HighFidelity DNA polymerase (New England BioLabs) was followed by 30 cycles of 45 s at 94° C., 60 s at 65° C., and 60 s at 72° C.
Construction of the RAE-1γMCMVm164SIINFEKL-Strain.
[0495] The SIINFEKL (SEQ.ID.NO:10) coding DNA sequence was inserted into ORF m164 of the genome of RAE-1γMCMV, which replaced the DNA sequences for the immunodominant intrinsic m164 peptide 167-AGPPRYSRI-175 (SEQ.ID.NO:2), by using the shuttle plasmid pST76K-m164_SIINFEKL (SEQ.ID.NO:10)-(Lemmermann et al., 2010, supra) and a recA-mediated recombination technique (Borst E. M. et al., 2007, supra) as described in Lemmermann et al. (Lemmermann et al., 2010, supra). Correct insertion was verified by restriction analysis using Apol and sequencing.
Construction of SIINFEKL-Peptide Expressing Recombinant Viruses.
[0496] MCMV-SIINFEKL and RAE-1γMCMVSIINFEKL were constructed by orthotopic peptide swap on the WT-MCMV or RAE-1γMCMV backbone, respectively, as described previously (Lemmermann, N. A., K. Gergely, et al. (2010) “Immune evasion proteins of murine cytomegalovirus preferentially affect cell surface display of recently generated peptide presentation complexes.” J Virol 84(3): 1221-36). Lemmermann et al., 2010, supra
Construction of Recombinant Plasmids Containing HA Expression Cassette
[0497] Plasmids m157 pGL3 HMIEP PR8-HA full Tischer kanamycin and m157 pGL3 HMIEP PR8-HA headless Tischer kanamycin were constructed to replace the m157 ORF in the wild type MCMV-BAC and in Δm152-RAE1yMCMV-BAC, respectively. PR8-HA was obtained by PCR from pUC18 containing PR8-HA (UniProt P03452) as a template DNA, provided by Peter Staheli, The University Medical Center Freiburg, Germany. The primers were PR8HA fw: 5′-G CCGCCATGAAGGCAAACCTACTGG-3′ (SEQ.ID.NO:11), PR8 V5 rv: 5′-CGTAGAATCGAGACCGAGGAGAGGGTTAGGGATAGGCTTACCGATGCATATTCT GCACTGCAAAGATCC-3′ (SEQ.ID.NO:12), wherein the introduced V5 tag is indicated in bold and PR8 SIINFEKL: 5′-TCACAGTTTTTCAAAGTTGATTATACTCGTAGAATCGAGACCGAGGAGAGGGTTA GG-3′ (SEQ.ID.NO:13), wherein the introduced SIINFEKL tag is indicated in bold; for the amplification of the PR8 HA full form primers Headless fw: 5′-GGAGGCAACACGAAGTGTCAAACACC-3′ (SEQ.ID.NO:14) and Headless rv: 5′-GCCACCACATAGTTTTCCGTTGTGGC-3 (SEQ.ID.NO: 15) were used for the amplification of PR8 HA headless.
[0498] PCR was performed with the following cycler conditions:
[0499] An initial step for 2 min at 98° C. for activation of HighFidelity Phusion DNA polymerase (New England BioLabs) was followed by 30 cycles of 10 s at 98° C., 10 s at 60° C., and 60 s at 72° C. PCR amplified HA full ORF was cloned into pGL3 μlasmid (Invitrogen) together with a Tischer-modified kanamycin resistance gene, also referred to herein as kan.sup.R or kanR, which was inserted further downstream (see also
[0500] For the construction of recombinant PR8 hemaglutinin expressing mutants, both full and headless form, a two step markerless red recombination system as described by Tischer et al. (Tischer, B. K. et al, 2006, supra; Tischer, B. K. et al., Methods Mol Biol. 2010, 634:421-30) (see also
[0501] Recombinant viruses were confirmed by restriction analysis (BamHI and HindIII restriction for Δm157-PR8-HA full-MCMV-BAC and Δm157 -PR8-HA-full-Δm152-RAE-1γMCMV-BAC, and NsiI restriction enzyme for Δm157-PR8-HA-headless-MCMV-BAC and Δm157-Δm157-PR8-HA headless-Δm152-RAE-1γMCMV-BAC)
[0502] In connection therewith it will be immediately acknowledged by a person skilled in the art that Δm157-PR8-HA full-MCMV is also referred to herein as MCMV-Δm157-HA and MCMV-HA.
[0503] Furthermore, Δm157-PR8-HA-full-Δm152-RAE-1γMCMV-BAC is also referred to herein as RAE-1γMCMV-HA or RAE-1γMCMV-Δm157-HA.
[0504] It will be understood that Δm157-PR8-HA-headless-MCMV is based on WT-MCMV, wherein influenza virus PR8 hemagglutinin (HA) headless form was inserted into m157.
[0505] It will also be understood that Δm157-Δm157-PR8-HA headles s-Δm152-RAE-1γMCMV-B AC is based on RAE-1γMCMV, wherein influenza virus PR8 hemagglutinin (HA) headless form was inserted into m157 and is also referred to herein as Δm157-PR8-HA headless-Δm152-RAE-1γMCMV.
Generation of GAPINSATAM-Peptide Expressing Recombinant Viruses.
[0506] For the purpose of testing the vector capacity of Rae1γMCMV, a RAE-1γMCMV virus mutant has been constructed expressing Mycobacterium tuberculosis H-2Db immunodominat epitope GAPINSATAM (SEQ.ID.NO:16) “swapped” into the position of MCMV m164 immunodominant epitope of WT-MCMV-BAC and RAE-1γMCMV-BAC by orthotopic peptide swap as described in Lemmerman et al. (Lemmerman et al., 2010, supra). A schematic illustration of the cloning process is shown in
(i) Design of Insert Containing Peptide Swap.
[0507] Primers were constructed in a way to replace the D.sup.d-restricted antigenic m164 peptide 167-AGPPRYSRI-175 (SEQ.ID.NO:2) with the D.sup.b-restricted Mtb32a (pepA) derived peptide 309-GAPINSATAM-318 (SEQ.ID.NO:16) (ref. UniProt O07175).
[0508] As primers m164 GAP fw:
TABLE-US-00005 (SEQ.ID.NO: 17) 5′-cgcccgctgccacgatggcctggttgttgacggcccagaacatg gcggtggccgagttgatcggggcgccgtcagcgccccaGCCAGTGTT ACAACCAATTAACC-3′,
wherein lower case letters represent homology region to m164 ORF in MCMV genome, underlined letters in bold represent homology regions between primers, italic letters are I-SceI restriction site sequence and capital letters represent homology to Tischer kanamycin cassette; and m164 GAP rv:
TABLE-US-00006 (SEQ.ID.NO: 18) 5′-gccgttcggaaaggactactgtcggacg gg cgcccgatcaactcggccaccgccatgTAGGGATAACAGGGTAATC GAT-3′,
wherein lower case letters represent homology region to m164 ORF in MCMV genome, underlined letters in bold represent homology regions between primers, italic letters are I-SceI restriction site sequence and capital letters represent homology to Tischer kanamycin cassette, were used. PCR was performed with the following cycler conditions:
[0509] An initial step for 2 min at 98° C. for activation of HighFidelity Phusion DNA polymerase (New England BioLabs) was followed by 30 cycles of 10 s at 98° C., 10 s at 60° C., and 60 s at 72° C. As DNA template plasmid pEP-SaphAI provided by K. Tischer was used.
[0510] For the construction of recombinant mutants a two step markerless red recombination system as described by Tischer et al. (Tischer, B. K. et al, 2010, supra) (see
Construction of the ULBP2 Expressing HCMV Recombinant
[0511] The ULBP2 ORF was amplified using primers
TABLE-US-00007 (SEQ.ID.NO: 19) 5′-GTCGGTACCGTCGCAGTCTTCGGTCTGACCACCGTAGAACGCAG AGCTccaccATGGCAGCAGCCgccGCTACC-3′′,
wherein the underlined letters indicate homology to nt position 182904—nt position 182857 (lower strand) of the mouse cytomegalovirus sequence according to GenBank Accession No.: U68299.1; and 5′-cccGGATCCctctccTCAGATGCCAGGGAGGATGAAG-3′ (SEQ.ID.NO: 20), wherein the Stop codon is indicated in bold and underlined and wherein small and large letters comprise additional details, e.g. Koszak sequence; and an ULBP2 cDNA clone (Open Biosystems; Genbank accession number: BC034689), and was cloned via Kpnl and BamHI restriction digest and ligation, between the MCMV major immediate-early promoter sequences and a Kanamycin resistance (KanR) cassette flanked by FRT sites. The whole insert comprising promoter MCMV MIE (nt 183088 to 182903 (lower strand) of Genbank accession entry: U68299.1) and KanR was amplified with primers 5′-GACACCGGGCTCCATGCTGACGTAGGTACCGACTGGGGTCAAAAGCCTttaaacggtact ttcccatagc-3′(SEQ.ID.NO: 21), wherein the capitalized letters are homologous to nucleotides 55134-55181 of the TB40E BAC (Genbank: EF999921.1) and 5′-CTTATAGCAGCGTGAACGTTGCACGTGGCCTTTGCGGTTATCCGTTCAGgaacacttaac ggctga-3′ (SEQ.ID.NO: 22), and inserted into the BAC-cloned genome of the HCMV strain TB40E (Genbank Accession Nr.: EF999921.1) (Sinzger C. et al., J Gen Virol. 2008 February; 89(Pt 2):359-68) by red-α, -β, γ-mediated recombineering (Borst E. M. et al., 2007, supra) replacing the UL16 ORF. The KanR cassette was excised by FLP recombinase. Correct insertion was verified by restriction analysis and using BgIII and Nsil and sequencing with primers 5′-GGCGATGCGGTATCGCGCACA-3′ (SEQ.ID.NO: 23) and 5′-GACACCTGTTCGTCCAGAATC-3 (SEQ. ID.NO: 24).
Generation of a HCMV Vaccine Vector Expressing ULBP2 and the Influenza Hemagglutinin Protein
[0512] The open reading frame (ORF) for influenza hemagglutinin (HA), according to Genbank accession number V01088, influenza A/PR/8 strain, is PCR amplified and cloned into plasmid vector (pUC19). Next to the HA ORF a PCR fragment is cloned carrying (i) a recognition site for the meganuclease I-SceI (ii) a sequence encoding kanamycin resistance, (iii) 50 nt homologous to the end of the HA coding sequences and (vi) 20 nt homologous to sequences immediately downstream of the 3′-end of the UL11 ORF of the CMV strain TB40E (5′-TATATAGACTGAAGCGGAGT-3′ (SEQ.ID.NO:39); indicated as light grey colored rectangle in
[0513] A PCR fragment is generated that includes the influenza HA ORF, the kanR cassette with the I-SceI site, the 50 nt homologous to the end of the HA ORF, using the above described plasmid as template and primers that provide 50 nt of DNA sequences homologous to the sequences immediately upstream and downstream of the UL11 ORF in the TB40E genome, respectively. The sequence of the forward and reverse primers is:
TABLE-US-00008 UL11-HA-fw: (SEQ.ID.NO: 40) 5′-CAGCTTTTGAGTCTAGACAGGGGAACAGCCTTCCCTTGTAAGAC AGAATGaaggcaaacctactggtcc-3′; and UL11-HA-rev: (SEQ.ID.NO: 41) 5′-GAGTCGTTTCCGAGCGACTCGAGATGCACTCCGCTTCAGTCTAT ATATCA-3′
[0514] Recombination between the BAC TB40E-ULBP2 carrying the TB40E genome with the replacement of the UL16 ORF by a ULBP2 expression cassette (as described above) and the PCR fragment is performed in E.coli strain GS1783 (Tischer, B. K. et al., Methods Mol Biol. 2010, 634:421-30) expressing the red α-, β-, -γ genes as described in Borst et al., (Borst E M et al., Curr Protoc Immunol., 2007 May; Chapter 10: Unit 10.32.; Tischer, B. K. et al., 2010, supra). Bacterial clones carrying a BAC with a replacement of the US11 ORF with the HA-kanR cassette are selected on agar plates containing chloramphenicol (17 μg/ml) and kanamycin (30 μg/ml). Recombinant BACs are characterized by restriction analysis and sequencing as described in Borst et al. (Borst E M et al.,2007, supra). The kanR cassette is excised by en passant mutagenesis via cleavage of the BAC DNA with the I-SceI nuclease and red α-, β-, γ-mediated recombination in the E. coli strain GS1783 as described in Tischer, B. K. et al., (Tischer, B. K. et al., 2010, supra).
[0515] More particularly, Fig.31 schematically shows the construction of recombinant HCMV expressing ULBP2 and influenza HA generated as described herein.
[0516] Infectious virus is generated by electroporation of human fibroblasts with the resulting BAC DNA as described in Borst et al. (Borst E M et al.,2007, supra).
[0517] Expression of the HA protein is tested in lysates of infected cells by immunoblotting using an HA-specific antibody.
Reconstitution of BAC-Derived Recombinant Viruses.
[0518] The reconstitution of recombinant viruses by transfection of BAC plasmid DNA, as well as the routine elimination of BAC vector sequences, was performed in C57BL/6 primary mouse embryo fibroblasts (MEF) for MCMV mutants and in human foreskin fibroblasts (HFF) for HCMV mutants and verified by PCR.
[0519] For the reconstitution of MCMV mutants, recombinant constructs were transfected using SuperFect reagent into 70% confluent MEFs prepared in six-well plate. Transfection solution was prepared according to SuperFect QIAGEN protocol. 7.5 μL of SuperFect was added to 150 pL total volume of recombinant construct mixed with DMEM. 10, 15 or 20 μl of purified BAC::DNA recombinant construct were used. Transfection solution was incubated for 10 min at room temperature to allow DNA complexes formation. During that period MEF were washed with 2 ml of PBS and overlaid with 500 μL of 3% DMEM. After 10 minutes, 500 μL of 3% DMEM was added to transfection solution, mixed well and drop-by-drop applied to cell culture. After 2-3 h of incubation at 37° C., medium was removed and 4 mL of fresh 3% DMEM was added. 5-7 days post transfection plaques appeared and supernatants were collected and used for second passage or stored at −70° C. till usage.
[0520] Verified BAC-vector-free virus clones were used to prepare high-titer stocks of sucrose gradient-purified viruses TB40_dUL16/ ULBP2, MCMV-m164_List, also referred to herein as MCMVList and RAE1γ MCMV-m164_List, also referred to herein as RAE-1γMCMVList, Δm157 HMIEP PR8 HA full mCMV, Δm157 HMIEP PR8 HA full Δm152 RAE1γmCMV, Δm157 HMIEP PR8 HA headless mCMV or Δm157 HMIEP PR8 HA headless Δm152 RAE1γ mCMV.
MCMV Production
[0521] MEFs were prepared in a Petri dish and grown to 70-80% confluence. 3 mL of supernatant containing virus particles was added to cell culture. When production was done from virus stock, 0.01 PFU per cell was added in a volume of 6 mL 3% DMEM. After 3-4 h of incubation period at 37° C. , 3% DMEM was added up to 30 mL. Cells were incubated at 37° C. for the time of maximum infection (about 5 days) when all the cells rounded and detached from the Petri dish, or could be removed by gently swirling the medium. After shaking off the cells, the mixture of cells and medium was transferred into 50 mL tubes. Cells were separated from the medium by centrifugation at 6400 g for 10 minutes. Supernatant was decanted into centrifuge tubes. The virus was pelleted by centrifugation at 26000 g for 90 minutes at 4° C. Supernatant was decanted, pellet resuspended in leftover medium and left at 4° C. overnight. Virus was laid over the 15% sterile sucrose/VSB cushion centrifuged 99 minutes at 4° C. and 52000 g. Supernatant was aspirated; pellet was overlaid with 300 mL of PBS and left over night at 4° C. The pellet was resuspended, aliquoted and stored at −70° C.
Virus Growth Kinetics
[0522] MEFs were grown in 24-well plates and infected with 0.1 PFU/cell of the virus. Virus was prepared in cold 3% DMEM. Media was removed from the cells and 200 mL of the virus suspension/well was added. After incubation period of 30 min at 37° C. 800 mL of warm 3% DMEM was added in each well. After 1 h at 37° C. supernatant was taken for day 0, and changed with 1 mL/well of warm 3% DMEM for all other time points. Supernatants were collected every day for seven days at the same time, centrifuged 4000 rpm/4min to remove cells and cell debris and frozen at −20° C. till titration.
Preparation of Listeria monocytogenes Inoculum
[0523] The hemolytic EGD strain (serovar1/2a) of L. monocytogenes and the recombinant L. monocytogenes strain stably expressing chicken ovalbumin (aa134-387) (Zehn, D., et al. 2009, Nature 458(7235): 211-4.), also referred to herein as OVA-Listeria, were grown in brain heart infusion (BHI) broth at 37° C. for 24 hours. The culture broth was centrifuged at 3000×g for 5 minutes, and the pelleted bacteria were resuspended in phosphate buffered saline (PBS), pH 7.4. The optical density of the bacterial suspension was estimated using a spectrophotometer at 600 nm, and the numbers of CFU of L. monocytogenes were extrapolated from a standard growth curve. The actual number of CFU in the inoculum was verified by plating on blood agar.
[0524] The actual number of CFU of OVA-Listeria in the inoculum was verified by plating on blood agar and BHI agar. Bacteria were grown in BHI broth to get enough material for inoculum. Blood agar was used for plating to count the number in inoculum in addition to estimation with sprectrophotometer.
Animals, Infection and Lymphocyte Subsets Depletion.
[0525] BALB/c (H-2.sup.d), C57BL/6 (H-2.sup.b), interferon (IFN) type I receptor.sup.−/− mice on 129 background (IFN-α/βR.sup.−/−) and BALB/c (H-2.sup.d) μMT/μMT.sup.−/− mice (Hasan, M. et al., 2002, Eur J Immunol 32(12):3463-71) were bred under specific-pathogen-free conditions at the Central Animal Facility of the Faculty of Medicine, University of Rijeka. Animals handling, experimental procedures and administration of anesthesia were performed in accordance with the guidelines contained in the International Guiding Principles for Biomedical Research Involving Animals. The Ethics Committee at the University of Rijeka approved all animal experiments described within this report.
[0526] Unless otherwise indicated, mice were f.p. injected with 2×10.sup.5 PFU of tissue culture-derived MCMV at the age of 6 to 8 weeks. Neonatal mice were i.p injected with 500 PFU of MCMV 6 hours postpartum.
[0527] Infections were performed using WT-MCMV (Smith strain) and recombinant viruses constructed using WT-MCMV or RAE-1γMCMV backbone.
[0528] L. monocytogenes was injected when the log growth phase was achieved in a volume of 200 or 500 μL of pyrogen-free saline intravenously.
[0529] For challenge experiments, Listeria monocytogenes EGD serovar 1/2a was used.
[0530] In vivo blocking of NKG2D, depletion of CD4.sup.+ T cells, CD8.sup.+ T cells and NK cells was performed by i.p. injection of monoclonal antibody (rat anti-mouse) to NKG2D (R&D Systems), CD4 (YTS 191.1), CD8 (YTS 169.4) and asialo-AGM1 (Wako Chemicals), respectively.
Determination of CFU in Mouse Organs
[0531] After dissection, organs (spleens and livers) were aseptically removed and homogenized in sterile PBS. After centrifugation for 5 min at 3000×g supernatants were decanted, pellets were resuspended in 5 mL of cold distilled water and incubated on ice for 15 min to release intracellular bacteria. Bacterial counts were obtained by plating serial ten-fold dilutions of each organ suspension on blood agar plates incubated at 37° C. for 24-48 h. Titres of L. monocytogenes were expressed as log.sub.10 of CFU per organ. In some experiments, small portions of the spleens and livers were taken for histological analysis.
[0532] To determine organ OVA-Listeria burden, spleens and livers were removed from infected mice 4 days p.i. and homogenized separately in PBS, following incubation in distilled water. Serial ten-fold dilutions of suspensions were plated onto blood-agar and CFUs were determined after 24-48 h incubation at 37° C. In some experiments, small portions of the spleens and livers were taken for histological analysis.
Determination of Virus Titers
[0533] To determine virus titer a standard plaque assay (Krmpotic, A. et al., 2005, J Exp Med 201(2):211-20) was performed. MEFs were prepared in 48-well cell culture plates and grown to 70% confluence. Virus was titrated in triplicates in log.sub.10 dilutions series (starting from 10.sup.−3 down to 10.sup.−10). After 1 h of incubation at 37° C., cells were layered with 500 μl of methylcellulose. Four days post infection virus plaques were counted and the PFU per mL was calculated according to formula:
Virus titer (PFU/ml)=number of plaques×V
[0534] V: dilution factor
[0535] To determine virus titer in mouse organs, the organs were dissected, transferred into 3% DMEM and frozen at −20° C. After ≧24 h organs were thawed slowly on ice and passed through the mesh. The mesh was rinsed with 2 mL of 3% DMEM and organ homogenates were serially diluted in factor-10 steps for the virus plaque assay. MEFs were plated in 48 well plates and grown close to confluence. The most of the cell culture medium was removed in a way that the cell monolayer remained covered with fluid. A 100 μl of suspension of appropriate dilution was added in duplicates. Plates were incubated for 30 min at 37° C. for virus adsorption and penetration and then centrifuged for another 30 min at 760 g and 20° C. for enhanced penetration.
[0536] After 30 min at 37° C. MEFs were covered with 0.2 ml of methylcellulose medium to prevent the formation of secondary plaques. Virus plaques were counted after 4 days of cultivation.
[0537] Detection limit of the assay was extended to 1 PFU per organ homogenate as described previously (Polic, B. et al., 1998, supra).
Real-Time PCR.
[0538] Genomic DNA was extracted from 10 mg mouse tissue or 300 μl blood using Wizard Genomic DNA Purification Kit (Promega), according to the instruction manual, and dissolved in 100 μl of DNA Rehydration Solution. Viral genome was quantified by real-time PCR using the LightCycler system (Roche) and the LightCycler Fast Start DNA MasterPlus SYBR Green I and analyzed by LightCycler data analysis software version 3.3.40. Primers ie4fwd (5′-TGACTTAAACTCCCCAGGCAA-3′; SEQ.ID.NO: 25) and ie4rev (5′-TAGGTGAGGCCATAGTGGCAG-3′; SEQ.ID.NO: 26), nucleotide positions: 6692-6672 and 6592-6612, respectively (GenBank accession no. L06816), were chosen to amplify a segment of exon 4 of the ie1 gene. A cellular gene was detected with primers glra1fwd (5′-TGCCTGTTCTTTGCAGTCTGT-3′; SEQ.ID.NO: 27) and glral rev (5′-AGTCGAGTGAAGGGTAACGAGC-3′; SEQ.ID.NO: 28), nucleotide positions: 312-332 and 403-382, respectively (GenBank accession no. X75832). Specificity of PCR products was determined by melting curve analysis. Serial dilutions of pGEM-T Easy Vector (Promega) expressing partial MCMV ie1 gene and of DNA extracted from MEF were used as standards to determine the MCMV genome copy numbers and the number of cells, respectively. Tissues DNA samples from uninfected mice and multiple samples without template served as negative controls. The PCR amplification efficiencies (E) for the ie1 and glra1 standard curves as well as for both genes in a titration of sample DNA were calculated according to the formula E=10.sup.−1/slope (technical note no. LC11/2000; Roche) and differed by ΔE<0.05 in the reported experiments. Likewise, for each of the two genes tested, amplification efficacies differed by ΔE <0.05 between a titration of sample DNA and the respective standard curve. To determine sensitivity of QPCR detection of MCMV, genomic DNA samples was spiked with serial dilutions of target plasmid pGEM-T Easy Vector containing iel genomic sequence as template in the PCR as previously described (Wheat, R. L., et al. 2003, J Virol Methods 112(1-2):107-13). Detection limit was found to be 6 copies of MCMV per 10.sup.6 cells.
Isolation of Splenocytes
[0539] Spleen was cut with scissors into small pieces in 5 cm Petri dish and put on the cell strainer (70 or 100 mm) above 50 mL blue-cap. It was pressed with the pestle into blue-cap while washing with 10 mL 5% RPMI. Suspension was centrifuged 5 min at 1500 rpm (centrifuge C412, Jouan). Supernatant was decanted and 5 mL of 1× lysing buffer was added. Pellet was resuspended and incubated for 5 min on ice. Lysis was stopped by addition of 10 ml 5% RPMI. Suspension was centrifuged 5 min at 1500 rpm. Supernatant was poured out and the precipitate was resuspended in 10 mL 10% RPMI. Suspension was strained through 70 or 100 mm cell strainer and splenocytes were counted. Cell suspension was adjusted to the final number of 10×10.sup.6 splenocytes/mL in 10% RPMI.
Interferon-γ Test
[0540] 100 μl (1×10.sup.6 cells) of splenocytes suspension was put on 96 well U-bottom and each sample was performed in duplicates. Peptides were added in concentration of 1 μg/sample and 100 μl of 10% RPMI was used as negative control. Samples were incubated at 37° C. for 1 h. Brefeldin A was added in 1:1000 ratio in volume of 10 μl per sample. Samples were incubated at 37° C. for 4 h.
Adoptive Transfer of MCMV-Specific CD8.SUP.+ T Cells.
[0541] Adoptive transfer experiment was performed as described previously (Holtappels, R. et al., 2008, J Infect Dis 197(4):622-9). In short, donors of CD8.sup.+ T cells were naïve or latently infected μMT/μMT.sup.−/− (B cell-deficient) mice, MCMV infected 6 months before the adoptive transfer. Splenocytes from three donors per group were pooled and number of MCMV-specific CD8.sup.+ T cells was assessed by combined staining with pp98, m164, m83, m84 and m04 MHC class I tetramers. Unfractionated splenocytes containing 10.sup.5 naïve CD8.sup.+ T cells or graded numbers of MCMV-specific CD8.sup.+ T cells were i.v. transferred to recipient BALB/c mice immunocompromised with a single dose of 6 Gy γ-irradiation 12 h prior to adoptive transfer. Recipients were f.p. injected with 10.sup.5 PFU of WT-MCMV 6 h after the adoptive transfer. Viral titers in the spleen were determined 12 days p.i. by plaque assay.
Flow Cytometry and Intracellular Staining.
[0542] After 4 h incubation, samples from IFNγ test were pooled to get 2×10.sup.6 of cells per sample. Plates were centrifuged at 1500 rpm for 5 min. Cells were washed with 200 μl of FACS medium and centrifuged at 1500 rpm for 5 min Supernatant was decanted, Fc block was added in volume of 25 μl and incubated 15 min on ice. αCD8 antibody was added in volume of 25 μl and incubated 20 min on ice. 150 μl FACS medium as added and centrifuged 5 min at 1500 rpm. Supernatant was decanted and 150 μl of PBS was added. Plates were centrifuged 5 min at 4000 rpm. Supernatant was discarded and 100 μl of 2% PFA in PBS was added. Plates were incubated 25 min at room temperature and washed two times in 100 μl PBS afterwards. Intracellular antibody was diluted in 0.1% saponin in FACS medium and incubated for 20 min at room temperature. Cells were washed 2× in 150 μl of 0.05% saponin in PBS and resuspended in 200 μl of FACS medium.
[0543] Cells were put on 96 well and washed with 200 μl of FACS medium and centrifuged at 1500 rpm for 5 min Supernatant was decanted, Fc block was added in volume of 25 μl and incubated 15 min on ice. Primary antibody was added in volume of 25 μl and incubated 20 min on ice. 150 μl FACS medium as added and centrifuged 5 min at 1500 rpm. Supernatant was decanted and secondary antibody was added in volume of 50 μl and incubated for 20 min on ice. Cells were washed in FACS medium and centrifuged at 1500 rpm for 5 min Supernatant was discarded and cells were resuspended in 200 μl of FACS medium.
[0544] The H2.sup.b-restricted SIINFEKL pentamer was purchased from Proimmune. SIINFEKL peptides were synthesized to a purity of >95% by Jerini Peptide Technologies.Custom MCMV-specific H-2.sup.d and H-2.sup.b class I restricted antigenic peptide synthesis to a purity of >80% was performed by Jerini Peptide Technologies. Tetramers were synthesized by the NIH tetramer core facility (http://www.niaid.nih.gov/reposit/tetramer/overview.html). Various fluorescently conjugated antibodies were used (CD8α (53-6.7), CD27 (LG.7F9), CD62L (MEL-14), CD122 (5H4), CD127 (A7R34), KLRG-1 (2F1), NKG2A/C/E (20D5), NKG2D (M1-6), CTLA-4 (UC10-4B9), PD-1 (J43), IL-2 (JES6-SH4), IFN-γ (XMG1.2), TNF-α (MP6-XT22), CD3r3 (H57-597), CD11c (N418), NKp46 (29A1.4), PDCA-1 (eBio927), RAE-1γ (CX1), RAE-1αβδε (199205), MULT-1 (237104), H60 (205326). An in vitro assay to detect cytokine production and degranulation was performed as previously described (Cicin-Sain, L. et al., 2007, supra). In short, splenocytes were resuspended in complete RPMI 1640 supplemented with 10% FCS and stimulated with 1 μg of peptides IE1/m123 (.sup.168YPHFMPTNL.sup.176; SEQ.ID.NO: 1), also known as a pp89 derived , m164 (167AGPPRYSRL75; SEQ.ID.NO:2), IE3 (.sup.416RALEYKNL.sup.423; SEQ.ID.NO:29), m139 (.sup.419TVYGFCLL.sup.426; SEQ.ID.NO:30), M45 (.sup.985HGIRNASFI.sup.993; SEQ.ID.NO:31) or M38 (.sup.316SSPPMFRV.sup.323; SEQ.ID.NO:32) for 6 h at 37° C. with brefeldin A (eBioscience) added for the last 4 hours of stimulation. For degranulation assay, CD107a monoclonal antibody (D4B) and monensin (eBioscience) were added to the cultured cells during peptide stimulation. For DC population analysis, splenocytes were digested by collagenase D (Roche) as described previously (Robbins, S. H. et al., 2007, supra). All samples were acquired by FACSAria (BD) and analyzed with FlowJo software (Tree Star).
In Vivo Cytotoxicity Assay.
[0545] Splenocytes were isolated from the spleens of uninfected BALB/c mice and loaded with 1 μg/mL of listeriolysin peptide .sup.91GYKDGNEYI.sup.99 per 6×10.sup.7 cells for 1 hat 37° C. before labeling with CFSE. LLO peptide-pulsed splenocyte targets were labeled with a low concentration (0.5 μM) of CFSE (Invitrogen), whereas control targets, not pulsed with a peptide, were labeled with a high concentration (5 μM) of CFSE for 10 minutes at 37° C., followed by being washed and incubated for an additional 30 min at 37° C. Differentially CFSE-labeled cells were washed, mixed in equal ratios and a total of 1×10.sup.7 cells per mouse was transferred intravenously into MCMVList or RAE1γMCMVList-infected or uninfected mice. Spleens were harvested 6 h later and the survival of the transferred splenocytes was analyzed by flow cytometry. Percentage-specific lysis of CFSE-labeled target cells was calculated as follows:
(1−[r uninfected control mouse/r infected test mouse])×100 where r=(frequency of unpulsed targets/frequency of peptide-pulsed targets).
Sequence Analysis of RAE-1γ.
[0546] Organ homogenates from γMT/γMT B cell-deficient mice with recurrent infection were serially diluted 2-fold across 96-well trays and added to MEF cultures in 96-well trays. Wells showing viral cytopathic effect derived from a single plaque were harvested for preparation of virus stocks. The RAE-1γ ORF was PCR amplified by using purified viral DNA. MEFs were infected with the recovered viruses and whole genomic DNA was extracted using a DNeasy blood and tissue kit (Qiagen). The region of interest was amplified by PCR with primers m152fw GTGTATGTGGCCCGACGGGCGG (SEQ.ID.NO: 33) and m152rv CGCGGGCTACTCCCGAAAGAGTAACATC (SEQ.ID.NO: 34). The amplificate was sequenced (3130 genetic analyzer, Applied Bioscience) using the primers m152fw GTGTATGTGGCCCGACGGGCGG (SEQ.ID.NO: 33, m152rv CGCGGGCTACTCCCGAAAGAGTAACATC (SEQ.ID.NO: 34), RAEfw ATGGCCAAGGCAGCAGTGAC (SEQ.ID.NO: 35) and RAErv TGCTCGACCTGAGGTAATTATAACCC (SEQ.ID.NO: 36). Sequences were aligned to the RAE-1γ ORF of the input virus using Vector NTI 11 (Invitrogen).
Quantification of MCMV-Specific Antibody and Serum IFN-α Level By ELISA.
[0547] Serum MCMV-specific IgG titers were determined by ELISA as previously described (Jonjic, S. et al., 1990, J Virol 64(11):5457-64). Serum levels of IFN-α were determined by ELISA KIT for IFN-α (PBL Biomedical Laboratories) according to the manufacturer's instructions.
Histological Methods
[0548] Hematoxylin-Eosin (HE) staining on paraffin sections was performed as described in the following:
[0549] Paraffin sections were deparaffined by washing slides 2×5 min in xylene, 2×3 min in 100% ethanol, 2×3 min in 95% ethanol and 2×5 min in PBS. Slides were stained with hematoxylin lmin and washed for 5 min in distilled water. Eosin staining was performed for 30 sec and slides were washed as follows: 5 min 70% ethanol, 5 min 80% ethanol, 5 min 90% ethanol, 5 min 100% ethanol, 2×5 min xylene. Slides were mounted using Aquatex.
[0550] Anti-CD3 staining on paraffin sections was performed as described in the following:
[0551] Paraffin sections were deparaffined by washing slides 2×5 min in xylene, 2×3 min in 100% ethanol, 2×3 min in 95% ethanol and 2×5 min in PBS. Endogenous peroxidase was blocked for 30 min in hydrogen peroxide solution. Slides were washed 2×5 min in PBS. Antigen retrival was performed in citrate buffer at 800w for 4 min and at 400 W at 15 min Slides were cooled at room temperature for 20 min and then washed 2×3 min in distilled water and 2×5 min in PBS. Unspecific staining was blocked by incubation in serum for 20 min Biotin was blocked by 15 min incubation in avidin block solution following 15 min biotin block solution. Primary antibody was diluted in 1% BSA-TBS and incubated for 1 h. Slides were washed 2×5 min in PBS. Secondary antibody biotin labeled was diluted in 1% BSA-TBS and incubated for 30 min Slides were washed 2×5 min in PBS, incubated with streptavidin-peroxidase for 30 min and washed 3×5 min in PBS. AEC was incubated for 10 min, slides were washed 3×1 min in distilled water, 10 sec in hematoxylin, 10 min under tap water, 1 min in distilled water and mounted using Aquatex.
Histopathology and Immunohistochemistry.
[0552] Sections from formalin-fixed, paraffin-embedded spleens were stained with hematoxylin and eosin (both Thermo Scientific). CD3-expressing lymphocytes on paraffin sections were visualized by anti-CD3 (SP7) (Abcam), followed by biotinylated goat anti-mouse immunoglobulin G (IgG) antibody (BD Pharmingen, San Diego, Calif.) and avidin-biotin-peroxidase complex (Roche Applied Science, Manheim, Germany) staining. Counterstaining was performed with hematoxylin. Slides were analyzed on an Olympus BX40 microscope, and images were acquired by Olympus digital camera (C-3030).
Statistics.
[0553] Statistical significance was calculated by unpaired two-tailed Student's t test using Prisma 4 software and/or GraphPad Prism 5 software (GraphPad Software). The significant differences between tested groups are indicated with star symbols as follows: p<0.05 (*), p<0.01 (**) and p<0.001(***). Statistical analyses of the virus titers were done by Mann-Whitney U test. Flow cytometry analysis was performed using BD FACSDiva software.
Example 2
Generation and In Vitro Characterization of a Recombinant MCMV Expressing the NKG2D Ligand RAE-1γ
[0554] To study how the expression of NKG2D ligand by MCMV influences immunobiology of this virus infection, the present inventor designed a recombinant virus, referred to herein as RAE-1γMCMV that expresses RAE-1γ. RAE-1γMCMV was constructed by replacing the m152 ORF in the (BAC-cloned) MCMV genome with a cassette comprising the RAE-1γ ORF under control of the HCMV immediate-early promoter (
[0555] More particulary,
[0556] RAE-1γMCMV replication was assessed in a multistep growth kinetics assay and was compared to WT-MCMV replication. The results are shown in
[0557] More particularly,
[0558] It may be taken therefrom that RAE-1γMCMV replication was comparable to replication of WT-MCMV
[0559] Infection of SVEC4-10 cells, an endothelial cell line that does not express RAE-1γ, with the recombinant MCMV resulted in cell surface RAE-1γ expression, which may be taken from
[0560] More particularly,
[0561] It may also be taken from
[0562]
[0563] As may be taken from Fig.8B RAE-1γMCMV infection did not change the pattern of cell surface expression of other NKG2D ligands compared to Δm152-MCMV.
[0564] Altogether, these data indicate that RAE-1γ insertion into the MCMV genome had no effect on virus replication in vitro and resulted in the expression of RAE-1γ on the surface of infected cells. Furthermore it may be taken from the above that RAE-1γMCMV is attenuated in vivo in an NKG2D-dependent manner.
Example 3
RAE-1γMCMV is Strongly Attenuated In Vivo and Fails to Establish Persistent Infection in Salivary Gland
[0565] Adult BALB/c mice were injected with RAE-1γMCMV, WT-MCMV or Δm152-MCMV to study whether expression of the NKG2D ligand by the MCMV influences virus control in vivo. In agreement with previous results (Krmpotic, A. et al., 2002, Nat Immunol 3:529-535), at day 3 post infection replication of Δm152-MCMV was attenuated in an NKG2D-dependent manner as compared to WT-MCMV. Introduction of RAE-1γ to the Δm152-MCMV genome further attenuated viral replication and resulted in significantly lower viral titers in all tested organs as compared to Δm152-MCMV and WT-MCMV as may be taken from
[0566] More particularly,
[0567] The observed attenuation was NKG2D-dependent and was abolished by administration of anti-NKG2D blocking antibodies that restored RAE-1γMCMV titers almost to the WT-MCMV level.
[0568]
[0569] It may be taken therefrom that the salivary glands remain persistently infected with MCMV long after productive virus replication is terminated in other tissues (Reddehase, M. J. et al., 1994, J Exp Med 179(1):185-93; Jonjic, S. et al., 1989, J Exp Med 169(4):1199-212). NK cells and CD4+T cells are essential for virus clearance in the salivary glands and prevention of horizontal virus spread (Jonjic, S. et al., 1989, supra; Campbell, A. E. et al., 2008, Med Microbiol Immunol 197(2):205-13). The present inventor therefore compared the virus titers in salivary glands 15, 60 and 150 days after RAE-1γMCMV, WT-MCMV and Δm152-MCMV infection. In contrast to a high-titer persistent virus replication in WT-MCMV infected mice, no infectious virus was detected in salivary glands following RAE-1γMCMV infection (
[0570] Although Δm152-MCMV reached slightly lower virus titers compared to WT-MCMV, replication kinetics of these two viruses in salivary glands were similar. The present inventor next determined whether marked differences between RAE-1γMCMV and WT-MCMV replication are reflected in the kinetics of viral clearance from blood and viral genome load in tissue during latency.
[0571]
[0572] It may be taken therefrom that unlike WT-MCMV infection in which viral DNA was maintained in the blood for prolonged period of time (Balthesen, M. et al., 1993, J Virol 67(9):5360-6), viral DNA was cleared from the blood of RAE-1γ MCMV infected mice by day 45. At that time, RAE-1γMCMV DNA remained in organs, but the viral load was reduced to a barely detectable level or in some cases, to below the limit of detection. Viral DNA load in Δm152-MCMV infected mice corresponded to infectious virus titers (
[0573] To study how the expression of NKG2D ligand by the MCMV affects virus control in mice with constitutively more efficient NK cell response, the present inventor injected C57BL/6 with RAE-1γMCMV, WT-MCMV or Δm152 MCMV. MCMV resistance of C57BL/6 mice is due to the expression of Ly49H activating receptor on NK cells, which recognizes virally encoded protein m157 (Arase, H. et al.,2002, Science 296(5571):1323-6; Smith, H. R. et al.,2002, Proc Natl Acad Sci USA 99(13):8826-31).
[0574]
[0575] It may be taken therefrom that, similarly to results in MCMV-sensitive BALB/c mice, RAE-1γMCMV reached significantly lower titers compared to WT-MCMV and Δm152 MCMV, hence RAE-1γMCMV is attenuated in Ly49H.sup.+ C57BL/6 mice.
[0576] Thus, NKG2D-mediated control of RAE-1γMCMV was not covered by NK cell activation via Ly49H as in the case following infection with MCMV mutant lacking m152 only, which may be taken from Fig.9 A. Taken together, expression of RAE-1γ by MCMV resulted in a dramatic attenuation of virus replication in different organs and a lower latent viral DNA load.
Example 4
RAE-1γMCMV is attenuated even in neonatal mice.
[0577] Neonatal mice are highly sensitive to MCMV infection and intraperitoneal (i.p) injection even with low dose of cell culture-derived virus results in significant morbidity and mortality. Mice that survive MCMV infection establish a disseminated, high-titer virus replication and long-lasting persistent infection in salivary glands (Reddehase, M. J. et al., 1994, supra). To test RAE-1γMCMV replication in neonatal mice, newborn animals were injected i.p. with 500 PFU of RAE-1γMCMV or WT-MCMV.
[0578] The results may be taken from
[0579] More particularly,
[0580] It may be taken therefrom that during the first 5 days of infection both viruses replicated to comparable titers, but starting from day 7 RAE-1γMCMV replication was significantly reduced in all tested organs (
[0581] Productive RAE-1γMCMV infection was cleared by day 11 in spleen and liver and by day 19 in lungs and even in salivary glands. By contrast, around that time WT-MCMV replication in salivary glands and lungs were plateau levels (
[0582] Accordingly, RAE-1γMCMV is attenuated in neonatal mice.
[0583] Similarly to results obtained in adult mice, Δm152-MCMV replication was attenuated compared to WT-MCMV but not to the level of RAE-1γMCMV attenuation. Furthermore ca. 3 weeks after infection, Δm152-MCMV still replicated to high titers in salivary glands, which may be taken from
[0584]
[0585] It may be taken therefrom that RAE-1γMCMV is attenuated compared to MCMV lacking the m152 gene only , namely Δm152-MCMV, in new-born mice.
[0586] Attenuated RAE-1γMCMV replication in neonates led to a lower load of viral DNA in various organs, while prolonged, high-level WT-MCMV replication resulted in higher load of viral DNA in organs, which may be taken from
[0587] More particularly,
[0588] As may be taken from the above, RAE-1γMCMV infection in neonates is characterized by attenuated virus replication, shorter duration of the productive infection and subsequent lower virus DNA load as compared to the WT-MCMV.
Example 5
Efficient Priming and Maintenance of Adaptive Immune Response After RAE-1γMCMV Infection
[0589] To test whether the RAE-1γMCMV attenuation impacts on the adaptive antiviral immune response, adult BALB/c mice were footpad injected with 2×10.sup.5 PFU of RAE-1γMCMV, WT-MCMV or Δm152 MCMV. The kinetics of the virus specific T cell response was followed by use of MHC class I tetramers loaded with MCMV peptides (Holtappels, R. et al., 2008, Med Microbiol Immunol 197(2):125-34).
[0590] The results are shown in
[0591] More particularly,
[0592] The CD8.sup.+ T cell response was dominated by IE1/m123-specific and m164-specific cells, while the response to the 4 other studied epitopes (m04, M83, M84, M45) was low or below the level of detection (
[0593] Following infection with either of three viruses the m164-specific CD8.sup.+ T cells displayed comparable stable memory kinetics. By contrast, immunoinflation of IE1/m123-specific T cells in spleen at 9 months p.i. was less prominent following RAE-1γMCMV and Δm152-MCMV than after WT-MCMV infection (Holtappels, R. et al., 2000, J Virol 74(24):11495-503). The kinetics of the antiviral CD8.sup.+ T cell response in the blood closely reflected that in spleen (data not shown). The phenotypic and functional properties of virus-specific CD8.sup.+ T cells were similar following RAE-1γMCMV, WT-MCMV and Δm152-MCMV infection, which may be taken from
[0594] More particularly,
[0595] Between 60 and 75% of IE1/m123-specific and m164-specific CD8.sup.+ T cells in spleen and blood retained effector memory phenotype (TEM) up to 9 months after the infection. It is important to note that the expression of NKG2D, a CD8.sup.+ T cell costimulatory receptor, was essentially identical following both RAE-1γMCMV and WT-MCMV infection, which may be taken from
[0596] More particularly,
[0597] Also, the inhibitory receptors PD-1 and CTLA-4, described to be associated with T cell exhaustion during persistent infections (Wherry, E. J., and Ahmed, R., 2004, J Virol 78(11):5535-45) were not upregulated on memory CD8.sup.+ T cells and the T cells remained fully functional throughout latent RAE-1γMCMV and WT-MCMV infection, which may be taken from
[0598] More, particularly,
[0599]
[0600] It may be taken therefrom that at each time point analyzed, the percentage of CD8.sup.+ T cells detected by tetramer staining was similar to the percentage of CD8.sup.+ T cells secreting IFN-γ upon stimulation with a viral antigenic peptide in vitro (see
[0601] It may be also taken from the above that kinetics and phenotype of MCMV-specific memory CD8.sup.+ T cells in RAE-1γMCMV, WT-MCMV and Δm152-MCMV infected mice are comparable.
[0602] Interestingly, in C57BL/6 mice frequency of MCMV-specific CD8.sup.+ T cells at early time point after RAE-1γMCMV infection was even higher compared to WT-MCMV, which may be taken from
[0603] More particularly,
[0604] Similar priming capacity and the frequency of virus specific CD8.sup.+ T cells after infection with RAE-1γMCMV or WT-MCMV in spite of dramatic differences in the load of infectious virus in their tissues, prompted the present inventor to test whether this can be explained by differential effect of RAE-1γMCMV and WT-MCMV on dendritic cells (DC) in vivo. MCMV infection results in a reduction of conventional DCs (cDC) in BALB/c mice which can be prevented by efficient antiviral NK cell response in C57BL/6 strain (Robbins, S. H. et al.,2007, supra; Andrews, D. M. et al.,2010, J Exp Med 207(6):1333-43).
[0605] To test how the vaccine virus affects DCs in vivo the present inventor compared DC subsets following RAE-1γMCMV and WT-MCMV injection in BALB/c mice.
[0606] The results are shown in
[0607] More particularly,
[0608] It may be taken therefrom that while a marked reduction of cDCs occurred at early time after WT-MCMV infection, both CD11b and CD8a subsets of cDC were preserved following RAE-1γMCMV infection (see
[0609] As reported by others (Robbins, S. H. et al.,2007, supra) the frequency of cDC in spleen of infected mice inversely correlated with type I interferons levels in sera of infected mice. At day 2 post infection the average level of IFN-α in sera was significantly higher after WT-MCMV (5212±1266 pg/ml) as compared to RAE-1γMCMV infection (1459±840 pg/ml). Thus, an efficient early control of RAE-1γMCMV resulted in preservation of cDCs, possibly by preventing an overwhelming production of type I IFNs, providing optimal conditions for priming of MCMV-specific T cells.
[0610] In vivo antiviral effector activity of MCMV-specific memory CD8.sup.+ T cells generated following RAE-1γMCMV and WT-MCMV infection was compared by prophylactic adoptive transfer into immunodepleted MCMV-infected recipient mice. The result is shown in
[0611] More particularly,
[0612] Donors of memory CD8.sup.+ T cells were taken from μMT/μMT B cell-deficient mice either naïve (grey circles) or latently infected with RAE-1γMCMV (black circles) or WT-MCMV (white circles) at least 6 mo p.i. Splenocytes from three donors per group were pooled and the number of MCMV specific CD8.sup.+ T cells was assessed by combined staining with pp98, m164, m83, m84 and m04 MHC class I tetramers. 10.sup.4 naïve CD8.sup.+ T cells or graded numbers of MCMV-specific CD8.sup.+ T cells, as indicated on the x-axis, were i.v. transferred to recipient BALB/c mice immunocompromised by 6 Gy γ-irradiation. Recipients were f.p. injected with 10.sup.5 PFU of WT-MCMV 6 h after the cell transfer.
[0613] Viral titers in spleen were determined 12 d p.i. by plaque assay and are shown on the y-axis as log.sub.10 PFU per spleen. Titers of individual mice (circles) and median values (horizontal bars) are shown. Ø means no transfer. DL means detection limit and is indicated by the dashed line.
[0614]
[0615] It may be taken therefrom that adoptive transfer of only 10.sup.3 MCMV-specific cells markedly limited virus multiplication while 10.sup.4 MCMV-specific cells nearly abolished virus replication in spleen. No differences in protective capacity of CD8.sup.+ T cells generated following RAE-1γMCMV and WT-MCMV infection were observed (see
Example 6
RAE-1γMCMV Immunization Protects Mice from Challenge Infection
[0616] To test whether the immune response induced by the RAE-1γMCMV infection is sufficient to protect the host from challenge infection, adult BALB/c mice were footpad injected with 2×10.sup.5 PFU of RAE-1γMCMV or WT-MCMV 6 months prior to lethal challenge with salivary gland derived MCMV (SGV).
[0617] The result is shown in
[0618] More particularly,
[0619] It may be taken from
Example 7
Strong Attenuation In Vivo Does Not Prevent RAE-1γMCMV to Establish Latent Infection and to Reactivate Upon Immunosuppression
[0620] The burden of latent viral DNA in a tissue predetermines the risk of recurrent CMV infection (Reddehase, M. J. et al., 2002, J Clin Virol 25 Suppl 2:S23-36). The barely detectable DNA load of RAE-1γMCMV during latent infection could limit viral reactivation and subsequent recurrent virus infection. However kinetics and phenotype of MCMV-specific T cells observed during latent infection were indicative of repeated antigen exposure. Therefore, the present inventor investigated the potential of RAE-1γMCMV to reactivate from latency by combined depletion of NK cells and T cell subsets in latently infected B-cell deficient μMT/μMT mice.
[0621] In this experimental system, the absence of antibodies facilitates virus multiplication and dissemination after recurrence, which increases the sensitivity of virus detection (Jonjic, S. et al., 1994, supra). Following immunosuppression, recurrent infection occurred independently in different organs in 4 out of 6 (66%) RAE-1γMCMV infected mice and in all of the WT-MCMV infected mice , which may be taken from
[0622] More particularly,
[0623] It may be also taken therefrom that while in WT-MCMV infected mice recurrent infection first occurred in salivary glands favoring virus shedding, recurrence was not detected in salivary glands of any RAE-1γMCMV infected mice. Thus, tight immune control of the RAE-1γMCMV during primary infection did not prevent viral recurrence after immunosuppressive treatment altogether but altered incidence and sites of recurrence.
Example 8
RAE-1γ remains intact during latent RAE-1γMCMV infection.
[0624] Selective pressure from the immune system can result in emergence of virus mutants that escape from the immune control, even in herpes viruses with highly accurate mechanisms of genome replication (French, A. R. et al., 2004, Immunity 20(6):747-56; Voigt, V. et al., 2003, Proc Natl Acad Sci USA 100(23):13483-8). To address whether a strong immune response can drive emergence of RAE-1γMCMV mutants that escape from NKG2D-mediated immunesurveillance the present inventor prepared plaque-purified viruses from spleen and lung homogenates of B-cell deficient μMT/μMT mice with recurrent RAE-1γMCMV infection (see above).
[0625] The result is shown in
[0626] More particularly,
[0627] A total of 73 recurrent, plaque purified virus isolates (termed RAE-1γMCMVr1 to RAE-1γMCMVr73) were isolated from organ homogenates of B-cell deficient μMT/μMT mice with recurrent RAE-1γMCMV infection. In connection therewith it will be understood that WTr as used herein is a WT-MCMV which was isolated as recurrent, plaque purified virus. The white histogram indicates the surface expression of RAE-1γ after WTr-MCMV infection.
[0628]
[0629] The 73 μlaque purified isolates (termed RAE-1γMCMVr1 to RAE-1γMCMVr73) were tested for the expression of RAE-1γ and some of them were tested for sensitivity to the NKG2D-mediated immune control in vivo. Infection of SVEC4-10 cells with plaque purified isolates resulted in cell surface expression of RAE-1γ detected by FACS analysis as may be taken from
Example 9
Control of RAE-1γMCMV in Mice Lacking the Receptor for Type I Interferons and After Haemoablative Irradiation
[0630] Type I interferons, also referred to herein as IFNs, play an important role in limiting MCMV replication during the early stage of infection. Consequently, mice lacking the receptor for type I IFNs, also referred to herein as IFNα/βR.sup.−/−, are 1,000-fold more susceptible to MCMV infection than the parental mouse strain (Presti, R. M. et al.,1998, J Exp Med 188(3):577-88). To test whether RAE-1γMCMV is efficiently controlled even in the severely immunodeficient host, IFNα/βR.sup.−/− mice were i.p. injected with RAE-1γMCMV, WT-MCMV or Δm152 MCMV.
[0631] The result is shown in
[0632] More particularly,
[0633] It may be taken therefrom that while most of the WT-MCMV and Δm152-MCMV infected mice succumbed to the infection, i.e. 85% and 60%, respectively, the mortality rate of the RAE-1γMCMV infected animals was significantly lower (30%) (see
[0634] NK cells are more resistant to irradiation than other lymphoid cells (Ogasawara, K. et al., 2005, Nat Immunol 6(9):938-45; Erlach, K. C. et al.,2008, Med Microbiol Immunol 197(2):167-78) and RAE-1γMCMV is extremely sensitive to the NK cell control. The present inventor assessed whether residual NK cells, after hematoablative treatment, are sufficient to control RAE-1γMCMV infection. BALB/c mice were hematoablated using a sublethal dose (6 Gy) of total body γ-irradiation 6 hours prior to footpad injection with 10.sup.5 PFU of RAE-1γMCMV or WT-MCMV and viral titers were compared on day 7 after infection.
[0635] The result is shown in
[0636] More specifically,
[0637] Were indicated mice were depleted for NK cells by anti-asialoGM1 antibody (αGM1). Viral titers were determined 7 d p.i. by plaque assay. Titers of individual mice (circles) and median values (horizontal bars) are shown as log.sub.10 PFU per organ on the y-axis. DL means detection limit and is indicated by the dashed line.
[0638] It may be taken therefrom that RAE-1γMCMV infection in hematoablated mice resulted in significantly lower viral titers as compared to the WT-MCMV suggesting that residual NK cells are sufficient to restrain RAE-1γMCMV infection (see
[0639] Together these data argue that infection with the RAE-1γMCMV presents a low risk for disease, even in severely immunodeficient hosts.
Example 10
Maternal RAE-1γMCMV Immunization Protects Neonatal Mice From MCMV Infection
[0640] Maternal preconception immunity to CMV provides substantial protection against congenital infection (Fowler, K. B. et al., 2003, Jama 289(8):1008-11; Boppana, S. B., and Britt, W. J., 1995, J Infect Dis 171(5):1115-21; Boppana, S. B. et al., 2001, N Engl J Med 344(18):1366-71). The presence of maternal antiviral antibodies is associated with a decreased incidence of intrauterine transmission and better neurological outcomes in the setting of congenital infection. The role of antibodies in the prevention of congenital infection has also been emphasized in the guinea-pig CMV model (Schleiss, M. R., 2008, J Clin Virol 41(3):224-30). Since the mouse hemoplacental barrier does not support MCMV transfer the present inventor established a model of i.p. neonatal MCMV infection whose pathogenesis closely resembles congenital HCMV infection (Koontz, T. et al., 2008, J Exp Med 205(2):423-35). To test whether the maternal antibody response induced by the RAE-1γMCMV immunization can protect neonatal mice from MCMV infection, female BALB/c mice were injected with RAE-1γMCMV, WT-MCMV or mock infected two weeks before mating. A number of neonates were sacrificed on the day of birth and tested for the presence of antiviral antibodies in serum, while the others were i.p. injected with 500 PFU of WT-MCMV and tested for replicating virus in the tissue.
[0641] The results are shown in
[0642] More specifically,
[0643]
[0644] It may be take therefrom that no antiviral antibodies were detected in the serum of neonates of naive females. By contrast, antiviral antibodies were detected in serum of RAE-1γMCMV and WT-MCMV immunized females and in serum of their neonates confirming passive placental transfer of antiviral antibodies (see
[0645] Whereas, MCMV infection in infected neonates of naive females resulted in disseminated virus replication, no replicating virus was detected in various tissues at day 9 after the infection in neonates of RAE-1γMCMV immunized females or in neonates of WT-MCMV immunized females (see
[0646] Thus, immunization with recombinant RAE-1γMCMV induced a maternal antibody response that, upon placental transfer, limited virus dissemination and protected neonatal mice from MCMV infection.
Example 11
Generation and Characterization of Recombinant MCMV Expressing NKG2D Ligand RAE-1γ and Immunodominant CD8.SUP.+ T Cell Epitope of Listeria monocytogenes
[0647] Listeria monocytogenes is a Gram-positive facultative intracellular pathogen which replicates in the cytoplasm and can spread from cell to cell without being exposed to extracellular environment Immune response to Listeria monocytogenes includes a complex network of cytokines and cells of innate and adaptive immunity (Unanue, E R, 1997, Immunol Rev.158:11-25). For the clearance of Listeria monocytogenes, interferon γ, also referred to herein as IFNγ, secreton during early days of infection is required. IFNγ is provided by NK cells as well as by CD8.sup.+ T, therewith contributing to innate immune system in response to Listeria monocytogenes.
[0648] RAE-1γMCMV expressing immunodominant CD8.sup.+ T cell epitope of Listeria monocytogenes, also referred to herein as RAE-1γMCMVList, was constructed using orthotopic peptide swap method as described by Lemmermann et al. (Lemmermann et al., 2010, supra) on RAE-1γMCMV backbone where Dd-restricted antigenic m164 peptide .sub.167AGPPRYSRI.sub.175 (SEQ.ID.NO:2) was swapped with the Kd-restricted listeriolysin O (LLO)-derived peptide .sub.91GYKDGNEYI.sub.99 (SEQ. ID. NO: 3) (see
[0649]
[0650] The HindIII cleavage map of the RAE-1γMCMV genome is shown (RAE-1γMCMV) with the genomic region encoding the m164 ORF below. In RAE-1γMCMVList the immunidominant m164 epitope (.sub.167AGPPRYSRL.sub.75; SEQ. ID. NO: 2) was swapped with listeriolysin epitope (GYKDGNEYI ; SEQ. ID. NO: 3).
[0651] RAE-1γMCMV backbone was constructed as described herein. In addition, MCMVList virus was constructed where where Dd-restricted antigenic m164 peptide 167AGPPRYSRL75 (SEQ.ID.NO:2) was swapped with the Kd-restricted listeriolysin O (LLO)-derived peptide 91GYKDGNEYI99 (SEQ. ID. NO: 3) in BAC-derived MCMV as a backbone.
[0652]
[0653] It may be taken therefrom that listeriolysin epitope expression did not interfere with growth of neither the WT-MCMV nor RAE-1γMCMV and both MCMVList and RAE-1γMCMVList had replication kinetics comprable with the one of the WT-MCMV.
[0654]
Example 12
Expression of NKG2D Ligand Enhances CD8.SUP.+ T Cell Response against Immunodominant Epitope Derived from Listeria monocytogenes
[0655] To test the effect of NKG2D ligand expression in response to listeriolysin epitope, BALB/c mice were injected footpad (f.p) with 2×10.sup.5 PFU of RAE-1γMCMV expressing listeriolysin epitope, also referred to herein as RAE-1γMCMVList, or WT-MCMV expressing listeriolysin epitope, also referred to herein as MCMVList. As already mentioned in Example 3 herein, MCMV expressing RAE-1γ was highly attenuated in vivo, which may also be taken from
[0656] More particularly,
[0657] The kinetics of listeriolysin specific CD8.sup.+ T cell response was followed up to three months post infection. The results are shown in
[0658] As may be taken therefrom the frequency of listeriolysin specific CD8.sup.+ T cells was higher in mice immunized with RAE-1γMCMV expressing listeriolysin compared with mice immunized with the virus expressing listeriolysin epitope only. Moreover, listeriolysin specific CD8.sup.+ T cells derived from both MCMVList and RAE-1γMCMVList infection retained effector memory phenotype. Altogether, this finding indicated that NKG2D ligand expressed in the context of MCMV enhances CD8.sup.+ T cell response to foreign epitope.
Example 13
Expression of NKG2D Ligand Dramatically Improves Protective Capacity of MCMV Vector
[0659] The above results demonstrate that RAE-1γ expressed in MCMV vector considerably improves listeriolysin specific CD8.sup.+ T cell response. Next the present inventor tested how this correlates with protection of vaccinated mice against challenge infection with Listeria monocytogenes. For that reason BALB/c mice were vaccinated with 10.sup.5 PFU f.p. of WT-MCMV, MCMVList or RAE-1γMCMVList, or left unvaccinated. Three weeks post vaccination mice were challenged with 2×10.sup.5 CFU/mouse of Listeria monocytogenes EGD.
[0660] The result is shown in
[0661] More particularly,
[0662] It may be taken therefrom that injection of Listeria monocytogenes into naive mice resulted in high bacterial load in both spleen and liver (see
[0663] Additionally, four days post challenge paraffin embeded spleen sections were stained with aCD3 antibody.
[0664] The results are shown in
[0665] More particularly,
[0666] It may be taken therefrom that RAE-1γMCMVList immunization preserves a periartheriolar lymphoid sheath (PALS) in L. monocytogenes challenge.
[0667] In addition, the efficacy of the RAE-1γMCMVList vaccine was also illustrated by the preservation of T cells in the periarteriolar lymphoid sheath of infected spleens, which are known to be depleted after L. monocytogenes infection (Merrick, J. C., et al. 1997, Am J Pathol 151(3): 785-92; Carrero, J. A. et al. 2004 J Immunol 172(8): 4866-74)
[0668] Altogether, the herpesviral vector engineered to express the NKG2D ligand RAE-1γ generated a highly protective LLO-specific response that was able to efficiently cope with a L. monocytogenes challenge infection. In vivo protective capacity correlated well with the frequency of listeriolysin specific CD8.sup.+ T cells directed against listeriolysin epitope, as measured four days post challenge, which may be taken from
[0669] More particularly,
Example 14
Protective Capacity Against Listeria monocytogenes Challenge in RAE-1γMCMVList Immunized Mice is CD8.SUP.+ T Cell Dependant
[0670] In the light of the above described Examples, a person skilled in the art would expect that CD8.sup.+ T cells were responsible for protection against challenge infection with Listeria monocytogenes. However, mice vaccinated with either RAE-1γMCMVList or MCMVList were exposed to although immunodominant yet single epitope of this pathogen.
[0671] In connection therewith it is important to know that in the prior art it was shown so far that previous infection with herpes viruses may increase the resistance of the host against unrelated bacterial or viral pathogens (Barton E S et al. 2007, Nature; 447(7142):326-9).
[0672] Therefore, four weeks after infection with RAE-1γMCMVList, MCMVList or WT-MCMV mice were challenged with 3000 CFU of Listeria monocytogenes with and without depletion of CD8.sup.+ T cells.
[0673] The result is shown in
[0674] More particularly,
[0675] It may be taken therefrom that the protective capacity of RAE-1γMCMVList is CD8.sup.+ T cell dependent. More particularly, RAE-1γMCMVList immunized mice showed much lower bacterial load in spleen and liver, compared to groups of mice immunized with MCMVList, mice immunized with WT-MCMV or naïve mice. These differences were practically abolished after depletion of CD8.sup.+ T cells confirming that these cells present dominant protective principle.
[0676] Pathohistological lesions in liver of infected mice were in accordance with these results, which may be taken from
[0677] More particularly,
[0678] It may be taken therefrom that infection of naïve mice with Listeria monocytogenes resulted in lesions throughout the liver. The lesions were characterized by multifocal inflammatory infiltrates with necrosis as well as microvesicular vacuolation of the hepatocytes. Similar pathohistological lesions were observed in mice previously infected with WT-MCMV. Interestingly, massive multifocal lesions were also observed in mice immunized with MCMVList, despite the lower bacterial load in livers and spleens as compared to nonimmunised control groups. In contrast, the liver of mice immunized with RAE-1γMCMVList was practically of normal histological appearance and only rare inflammatory foci were observed. Depletion of CD8.sup.+ T cells not only abolished protection but also resulted in multifocal inflammation and necrosis, similar to those observed in naïve Listeria monocytogenes infected mice.
[0679] Altogether, these results showed that RAE-1γMCMV is a potent vector for CD8.sup.+ T cell based vaccine approach.
[0680] In Listeria monocytogenes infection, NK cells produce IFNγ as a result of contact with infected bone marrow derived dendritic cells, also referred to herein as BMDCs, as well as in a response to different cytokines (Humann, J. and Lenz, L. L. 2010, J Immunol 184(9):5172-8).
[0681] As may be taken from
[0682] More particularly,
[0683] Listeria monocytogenes challenge of naive and wt MCMV vaccinated mice resulted in dramatic reduction of splenic NK cells γ (
Example 15
Enhanced CD8.SUP.+ T Cell Response in Mice Infected with RAE-1γMCMVList Correlates with Preserved DCs
[0684] It is well established that systemic MCMV infection results in depletion of splenic conventional dendritic cells (cDCs). Here the present inventor tested the impact of WT-MCMV and RAE-1γMCMVList on the frequency of cDC subsets in spleen.
[0685] The result is shown in
[0686] More particularly,
[0687] More precisely, mice were infected i.v. with indicated viruses or left uninfected and splenic cDCs were isolated using collagenase D digestion and analyzed for CD3.sup.− CD19.sup.− MHCII.sup.+ CD11c.sup.hi CD8α.sup.+ expression. It may be taken from
[0688] Yet, the loss of CD11b DC subset was less pronounced in RAE-1γMCMVList infected mice when compared to WT-MCMV infected (see
[0689] Next the present inventor tested frequency of plasmacytoid dendritic cells (pDCs) and serum level of interferon alfa (IFNα). IFNα is known to promote NK cell cytotoxicity (Biron, C A. et al., 1999, Annu Rev Immunol. 17:189-220), but can also act immunosuppressive when produced in high concentrations.
[0690] The result is shown in
[0691] More particularly,
[0692] It may be taken therefrom that there was no significant difference in the frequency of pDCs during infection with both WT-MCMV and RAE-1γMCMVList. Interestingly, however, the serum level of IFNα at day 1.5 was significantly higher in mice infected with WT-MCMV as compared to RAE-1γMCMVList infected mice (see
[0693] The above results indicate that early events after infection might be decisive for the differences observed in protective capacity of RAE-1γMCMVList. Therefore the present inventor also tested early CD8.sup.+ T cell response upon infection with either WT-MCMV, MCMVList or RAE-1γMCMVList.
[0694] The result is shown in
[0695] More particularly,
[0696] It may be taken therefrom that a higher frequency of effector memory as well as virus specific CD8.sup.+ T cells is detected upon RAE-1γ infection.
Example 16
Generation of HA-Containing Recombinant Viruses
[0697] The further test vector capacity of MCMV expressing NKG2D ligand Rae1γ, the present inventor inserted influenza virus PR8 hemagglutinin, also referred to herein as HA, in WT-MCMV and RAE-1γMCMV genome, resulting in MCMV-HA and RAE-1γMCMV-HA, respectively.
[0698] The construction of recombinant plasmids comprising HA expression cassette, and recombinant HA-full (RAE-1γMCMVHA) or HA-headless (RAE-1γMCMVHAheadless) RAE-1γMCMV is schematically shown in
[0699] More particularly,
[0700]
[0701]
[0702]
[0703] I. PCR amplification of expression plasmid with HCMV MIEP and KanR; pGL3 plasmid provided by Invitrogen (left panel) and PCR amplification of PR8 HA-ORF provided by Peter Staheli, Universitätsklinikum Freiburg, Germany;
[0704] II. Clone PR8 HA-ORF into expression plasmid (blunt-end ligation)
[0705] III. BgIII restriction of plasmid with HA-expression cassette
[0706] IV. Homologous recombination with MCMV-BAC, replacing the m157 ORF, whereby the KanR cassette will subsequently be removed using Sce-I endonuclease.
[0707]
[0708] I. PCR amplification of plasmid with HCMV MIEP, KanR and PR8 HA full-ORF;
[0709] II. Ligation of PCR amplified DNA fragment;
[0710] III. BgIII restriction of plasmid with HA-headless-expression cassette; and IV. Homologous recombination with MCMV-BAC, replacing the m157 ORF, whereby the KanR cassette will subsequently be removed using Sce-I endonuclease.
[0711]
[0712] It will also be understood that hmIEP referres to the major immediate early promoter of HCMV; HA1 refers to the H-2Kd-Balb/c restricted peptide HA533-541; HA2 refers to the H-2Kd-Balb/c restricted peptide HA533-541; In connection therewith it will be understood that HA1 is a subunit of HA. One domain of HA1 is a globular head that is deleted in the case of headless construct; HA2 is stalk subunit of HA, which is highly conserved among different influenza strains. Accordingly, both HAI as well as HA2 contain peptide HA533-541. SV40pA refers to the SV40 polyadenylation signal sequence and AmpR refers to an ampicillin resistence gene.
[0713] It may be taken from the above that Hemagglutinin was inserted in a place of m157, a gene coding for protein which is directly recognized by NK cell receptor Ly49H (Arase et al., 2002, supra). The generated viruses were designated as MCMV-Δm157-HA, also referred to herein as MCMV-HA. and RAE-1γMCMV-Δm157-HA, also referred to herein as Rae1γMCMV-HA, respectively.
[0714] In connection therewith it is important to note that previous studies showed that engagement of Ly49H with m157 upon MCMV infection leads to activation of NK cells and subsequently better control of infection in Ly49H positive mice. When m157 deletion mutant MCMV is used, C57BL/6 mice lost the ability to control the virus and infection results in high virus titers in visceral organs and salivary glands (Bubic, I. et al., 2004, J Virol. 78(14):7536-44).
[0715] The major problem in designing efficient influenza vaccine is mutation of viral genes encoding immunodominant proteins. The stalk region of hemagglutinin is conserved among different strains and therefore is potentially a good candidate for generation of cross-protective immune response (Steel J. et al., 2010, supra). Therefore, in addition to recombinant MCMV expressing entire HA, the present inventor has also generated above mentioned viruses expressing headless hemagglutinin inserted in a place of m157, namely RAE-1γMCMVHA, RAE-1γMCMVHAheadless, MCMV HA, MCMV HA. Since H2b restricted immunodominant epitope .sub.114YPYDVPDYA.sub.122 (SEQ.ID.NO:38) is positioned in a head of hemagglutinin, the present inventor has additionally inserted ovalbumin immunodominant H2b restricted peptide .sub.257SIINFEKL.sub.264(SEQ.ID.NO:10) in the stalk region of hemagglutinin to allow the present inventor following CD8.sup.+ T cell response to well described foreign epitope.
[0716] It is important to understand that the H2b-B6 mouse restricted peptide HA114-122 (YPYDVPDYA)- (SEQ.ID.NO:38) is not present in case of HA-“headless” mutant.
[0717] The H-2Kd-Balb/c restricted peptide HA533-541 (N-IYSTVASSL-C) (SEQ.ID.NO:37) is present in both headless and full length forms of HA PR8.;
[0718] Recombinant plasmids were constructed according to established procedures, and enzyme reactions were performed as recommended by the manufacturers. Throughout, the fidelity of PCR-based cloning steps was verified by sequencing (GATC, Freiburg, Germany).
[0719] Growth kinetics of MCMVAm157-HA and REA- lyMCMVAm157-HA were compared to WT-MCMV.
[0720] The result is shown in
[0721] More particularly,
[0722] It can be taken therefrom that insertion of hemagglutinin into the MCMV genome had no effect on the replication kinetics of the recombinant viruses (see
Example 17
Efficient CD8.SUP.+ T Cell Response to Influenza HA After Infection with RAE-1γMCMV-HA
[0723] Recombinant WT-MCMV and RAE-1γMCMV with IE1; m123/SIINFEKL or m164/SIINFEKL-peptide swap were constructed as described in Example 1 above.
[0724]
[0725] I. PCR amplification of KanR cassette and introduction of SIINFEKL (light grey block) and BAC homology regions, here homology to m123, (black blocks); and
[0726] II. Homologous recombination with WT MCMV-BAC, replacing the respective position of the BAC according to homology regions, here m123 ORF, whereby the KanR cassette will subsequently be removed using Flp recombinase;
[0727] III. Optionally PCR amplification of RAE-1γ expression cassette, comprising major immediate early promoter of HCMV (MIEP), RAE-1γ ORF and Kanamycin Resistence gene (KanR), thereby introduction of BAC homology regions (dark grey blocks);
[0728] IV. Homologous recombination with MCMV-SIINFEKL BAC as provided by steps I. and II. according to Lemmermann et al. (Lemmermann et al., 2010, supra), thereby replacing the respective position of the BAC according to the homology regions, here the m152 ORF, whereby KanR cassette will subsequently be removed using Flp recombinase;
[0729]
[0730]
[0731] To test whether hemagglutinin inserted in MCMV genome induces specific CD8.sup.+ T cell response, and how the NKG2D ligand expression influences this response, the present inventor has infected C57BL6 mice with MCMV-Δm157-HA or RAE-1γMCMV-Δm157-HA.
[0732] The result is shown in
[0733] More particularly,
[0734]
[0735] It may be taken therefrom that the hemagglutinin and SIINFEKL (SEQ.ID.NO:10)-specific CD8.sup.+ T cell response was followed up to 60 days post infection (see
[0736] It was further assessed whether RAE-1γMCMV-Δm157-HA is attenuated in C57BL/6 mice.
[0737] The result is shown in
[0738] More particularly,
[0739] Virus titers were determined in depicted organs at 4 days post infection (upper panels), and 8 day post infection (lower panels).
[0740] Virus titers for individual animals (circles and triangles) and median values (bars) are shown as log.sub.10 PFU per organ on the y-axis. Detection limit is indicated by the horizontal line.
[0741] It may be taken therefrom that virus expressing NKG2D ligand are attenuated in C57BL/6 mice (see
[0742] Gazit et al. (Gazit, R. et al., 2006, Nat Immunol. 7(5):517-23) demonstrated that Ncr1 receptor expressed on NK cells is essential for elimination of influenza virus infected cells in vivo by direct recognition of viral HA protein. Therefore, the present inventor has tested whether Ncr1 would have effect on generation of hemagglutinin specific CD8.sup.+ T cell response in MCMV-Δm157-HAor RAE-1γ-MCMV-Δm157-HAinfecion.
[0743] The result is shown in
[0744] More particularly,
[0745] It may be taken therefrom that RAE-1γMCMV-Δm157-HA generates efficient CD8.sup.+ T cell response regardless of the role of Ncr1 in vivo. No difference in HA specific CD8.sup.+ T cell response was observed at day 8 p.i. in C57BL/6 mice when compared to MCMV-Δm157-HA or RAE-1γMCMV-Δm157-HA infection in NCR.sup.−/− mice (see
Example 18
ULBP2 Expressing HCMV Recombinant
[0746] To test NKG2D impact on virus attenuation in human MCMV model, the same principle as in RAE-1γMCMV was applied and recombinant HCMV mutants were generated expressing UL16 binding protein 2 (ULBP2, also known as RAET1 H), an NKG2D ligand, in place of UL16 gene which codes for the protein downregulating ULBP2.
[0747]
[0748] More particularly,
[0749]
[0750] I. PCR amplification of ULBP2-ORF from ULBP2-encoding plasmid provided by Open Biosystems, subsequently subjected to enzyme restriction with Kpnl and BamHI;
[0751] II. Clone into expression plasmid with MCMV MIEP and KanR applying restriction enzyme digestion and ligation;
[0752] III. Generation of PCR fragment for recombination, wherein homology regions to target site of recombination, here to UL16, is depicted as dark grey boxes; and
[0753] IV. Homologous recombination with HCMV TB40E-BAC, thereby replacing the UL16 ORF, whereby KanR cassette will subsequently be removed using Flp recombinase.
[0754]
[0755] Next ULBP2 expression was detected in TB40E-infected fibroblasts by immunoblotting.
[0756] DNA of two BAC clones (#39, #41) generated as described above were transfected into human fibroblasts as described by Borst et al. (Borst, E. M. et al., 2007, supra). For comparison DNA of the parental BAC of the TB40E strain (Sinzger, C. et al., 2008, J Gen Virol.,89(Pt 2):359-68) was transfected. Infectious virus was reconstituted and fibroblasts were incubated until complete cytopathic effect occurred. Cells were harvested, lysed and proteins of the lysates were separated by SDS-PAGE, blotted and probed with an ULBP-2 specific antibody (R&D Cat. No. AF1298, 1:1000) followed by incubation with an HRP-anti-goat antibody (1:1000) and visualization of the signal with ECL substrate.
[0757] The results are shown in
[0758] More particularly,
[0759] As may be taken therefrom substantial amounts of ULBP2 were detected in TB40-ULBP2 #39 and #41 infected cells, whereas basically no ULBP2 expression were detected in noninfected human fibroblasts and small amounts of ULBP2 expression were detected in RVHB15 and TB40E-infected fibroblasts.
[0760] Furthermore the Surface expression of ULBP2 after infection of HFF with HCMV-ULBP2 and control virus was assessed.
[0761] The results are shown in
[0762] More particularly,
[0763] Furthermore the results of NK cell assay using HFF infected with HCMV-ULBP2, HCMV TB40 and uninfected HFF as targets are shown in
[0764]
Example 19
General Protocol for Vaccinating a Human Subject Using a Recombinant HCMV Expressing ULBP2
[0765] The recombinant HCMV used in accordance with this general protocol is a HCMV as described in Example 1 expressing ULBP2. The recombinant HCMV expressing ULBP2 is for use in a method of vaccinating the subject against HCMV and thus for use in a method for eliciting an immune response against HCMV.
Inclusion and Exclusion Criteria
[0766] A subject is admitted to participate in the vaccination trial if the human subject is a male or female human between 22 and 60 years of age at the time of enrollment into the trial, if the informed consent is obtained from the subject before vaccination, if the subject is healthy, as determined by a questionnaire concerning the medical history of the subject and clinical examination, and if the subject is tested to be seronegative for HCMV.
[0767] A subject is excluded from participation in the vaccination trial if the subject is tested to be seropositive for HCMV, if the subject is tested to be pregnant, if the subject is or has been undergoing drug therapy or vaccination within 30 days preceding the vaccination trial, if the subject was previously vaccinated against HCMV, if the subject has or had frequent recurrent herpes simplex infections, if the subject has or had any immunodeficiency, if the subject has or had a Hepatitis B infection or hepatitis C infection, if the subject has or had a medical history of allergic disease or reactions, if the subject has or had any major chronic illness including diabetes mellitus, if the subject has or had a medical history of any neurologic disease, if the subject is suffering from a malignancy, if the subject has an acute disease at the time of participation in the trial and/or if the subject has a medical history of administration of immunoglobulins or blood products within three months preceding the enrollment into the trial or if the subject has a history of chronic alcohol consumption or drug abuse.
Administration
[0768] HCMV expressing ULBP2 is used to inoculate the subject by a subcutaneous injection with 50 infectious units as determined by titration on permissive human fibroblast cells. Alternatively, the recombinant HCMV expressing ULBP2 is administered by oral inoculation with 250 infectious units. A placebo group is inoculated with the pharmaceutically acceptable carrier used in connection with the subcutaneous injection and oral inoculation of the HCMV expressing ULBP2.
[0769] A blood sample is taken from the patient before vaccination and a second blood sample is taken between day 28 and day 32 post vaccination.
[0770] Infection of the host is documented by comparison of the analysis of the blood sample taken before vaccination and the analysis of the blood sample taken between day 28 and day 32 post vaccination, whereby the blood samples are analyzed for [0771] (1) serological evidence of infection with HCMV, [0772] (2) serological evidence of antibody response to HCMV, and [0773] (3) evidence for the presence of specific CD8±T cells to HCMV.
Efficacy
[0774] To determine the efficacy of the recombinant HCMV expressing ULBP2 the kinetics and magnitude of the CMV-specific immune response is assessed in the healthy HCMV-sero-negative participants compared to the placebo group.
[0775] The efficacy of the HCMV-specific immune response is assessed as follows.
[0776] a) Determination of systemic HCMV infection is determined as follows: [0777] At day 0, as well as 1, 2, 6, 12 and 24 months post vaccination a urine sample, a blood sample and a saliva sample is taken from the participants and analyzed for HCMV using PCR.
[0778] b) Determination of antibody titers directed against HCMV. [0779] antibody titers directed against HCMV-specific proteins determined by neutralization and enzyme-linked immunosorbent assay (ELISA) and/or by Western blot assays in samples taken at 1, 6 and 12 months following vaccination. [0780] 2 months following vaccination, a 15 ml of blood sample is taken from the subjects and peripheral blood mononuclear cells (PBMC) are recovered by standard technologies. PBMC are stimulated in standard assays for detection of the proliferation of CD8.sup.+ T lymphocytes and CD4.sup.+ T lymphocytes in response to [0781] (1) HCMV antigens (viral lysate). [0782] In addition, in patients in which appropriate HLA haplotypes can be defined, CD8+ T lymphocyte responses are assayed using ELISPOT and flow cytometry following ex-vivo stimulation of mononuclear cells with the heterologous antigen and CMV antigens pp65, IE-1 and gB.
Protection
[0783] The vaccination is considered successful if positive serological responses to the HCMV-specific antigens are detected. More specifically, a serological response is considered positive if a more than 4-fold rise in antibody levels is detected and/or if viral nucleic acids are detected in the urine The emphasis is on assessment of HCMV-specific CD8 T cell priming and maintenance following vaccination with HCMV ULBP2. Regarding the CD8 T cell response the vaccination is considered successful if virus-specific CD8 T cell response against HLA haplotype matched HCMV infected human foreskin fibroblasts is similar to or exceeding the one in HCMV seropositive control subjects, as assessed by proliferation capacity and frequency of HCMV-specific CD8 T cells, as well as their capacity for IFNg production.
[0784] The results of these studies are quantified and compared to identical studies carried out at 6, 12, and 24 months following vaccination.
[0785] Surrogates of vaccine efficacy include antibody levels reactive with HCMV proteins and more importantly CD8.sup.+ T lymphocyte responses for HCMV antigens.
Example 20
Treatment of a Human Subject Using a Recombinant HCMV Expressing ULBP2
[0786] A 25 year old female human subject is treated in accordance with the general protocol of Example 19, whereby the recombinant HCMV expresses ULBP2. The recombinant HCMV expressing ULBP2, as described in Example 1 herein, is administered subcutaneously in a phosphate-buffered saline solution containing 50 infectious units of the recombinant HCMV.
[0787] A blood sample is taken from the subject at day 30 post vaccination and the titer of antibody against HCMV-specific protein is determined by ELISA. A significant antibody immune response against HCMV-specific protein is detected.
[0788] Furthermore, a blood sample is taken from the subject two months post vaccination and proliferation of both CD8.sup.+ T lymphocytes and CD4.sup.+ T lymphocytes is observed in response to (1) HCMV antigens after stimulation with lysate of HLA matched infected cells or (2) in response to virus-specific peptide epitopes, as indicated in the Example 19.
Example 21
General Protocol for Vaccinating a Human Subject Using a Recombinant HCMV Expressing a Heterologous Antigen
[0789] The recombinant HCMV used in accordance with this general protocol is a HCMV as described in Example 1 expressing ULBP2 and a heterologous antigen against which an immune response is to be elicited in a human subject. Such heterologous antigen is one as described in the instant specification and includes more specifically influenza hemagglutinin protein, antigen 85A or HIV-1 gag protein. The recombinant HCMV expressing influenza hemagglutinin protein is for use in a method of vaccinating the subject against influenza and thus for use in a method of eliciting an immune response against influenza. The recombinant HCMV expressing antigen 85A of mycobacterium tuberculosis is for use in a method of vaccinating the subject against mycobacterium tuberculosis and thus for use in a method of eliciting an immune response against mycobacterium tuberculosis. The recombinant HCMV expressing HIV-1 gag protein of HIV is for use in a method of vaccinating the subject against HIV and thus for use in a method of eliciting an immune response against HIV.
Inclusion and Exclusion Criteria
[0790] A subject is admitted to participate in the vaccination trial if the human subject is a male or female human between 22 and 60 years of age at the time of enrollment into the trial, if the informed consent is obtained from the subject before vaccination, if the subject is healthy, as determined by a questionnaire concerning the medical history of the subject and clinical examination, and if the subject is tested to be seronegative for HCMV.
[0791] A subject is excluded from participation in the vaccination trial if the subject is tested to be seropositive for HCMV, if the subject is tested to be pregnant, if the subject is or has been undergoing drug therapy or vaccination within 30 days preceding the vaccination trial, if the subject was previously vaccinated against HCMV, if the subject has or had frequent recurrent herpes simplex infections, if the subject has or had any immunodeficiency, if the subject has or had a Hepatitis B infection or hepatitis C infection, if the subject has or had a medical history of allergic disease or reactions, if the subject has or had any major chronic illness including diabetes mellitus, if the subject has or had a medical history of any neurologic disease, if the subject is suffering from a malignancy, if the subject has an acute disease at the time of participation in the trial and/or if the subject has a medical history of administration of immunoglobulins or blood products within three months preceding the enrollment into the trial or if the subject has a history of chronic alcohol consumption or drug abuse.
Administration
[0792] HCMV expressing ULBP2 and the heterologous antigen is used to inoculate the subject by a subcutaneous injection with 50 infectious units as determined by titration on permissive human fibroblast cells. Alternatively, the recombinant HCMV expressing ULBP2 and the heterologous antigen is administered by oral inoculation with 250 infectious units. A placebo group is inoculated with the pharmaceutically acceptable carrier used in connection with the subcutaneous injection and oral inoculation of the HCMV expressing ULBP2 and the heterologous antigen.
[0793] A blood sample is taken from the patient before vaccination and a second blood sample is taken between day 28 and day 32 post vaccination.
[0794] Infection of the host is documented by comparison of the analysis of the blood sample taken before vaccination and the analysis of the blood sample taken between day 28 and day 32 post vaccination, whereby theblood samples are analyzed for [0795] (1) serological evidence of infection with HCMV, [0796] (2) serological evidence of antibody response to the heterologous antigen, and [0797] (3) evidence for the presence of specific CD8±T cells to the heterologous antigen.
Efficacy
[0798] To determine the efficacy of the recombinant HCMV expressing ULBP2 and the heterologous antigen protein the kinetics and magnitude of the CMV-specific and antigen-specific immune response is assessed in the healthy HCMV-sero-negative participants compared to the placebo group.
[0799] The efficacy of the HCMV-specific immune response and the specific immune response against the heterologous antigen are assessed as follows.
[0800] a) Determination of systemic HCMV infection is determined as follows: [0801] At day 0, as well as 1, 2, 6, 12 and 24 months post vaccination a urine sample, a blood sample and a saliva sample is taken from the participants and analyzed for HCMV using PCR.
[0802] b) Determination of antibody titers directed against HCMV-specific proteins and of antibody titers against the heterologous antigen. [0803] 1, 6 and 12 months following vaccination antibody titers directed against HCMV-specific proteins and against the heterologous antigen determined by neutralization and enzyme-linked immunosorbent assay (ELISA) and/or by Western blot assays in samples taken at 1, 6 and 12 months following vaccination. [0804] 2 months following vaccination, a 15 ml of blood sample is taken from the subjects and peripheral blood mononuclear cells (PBMC) are recovered by standard technologies. PBMC are stimulated in standard assays for detection of the proliferation of CD8.sup.+ T lymphocytes and CD4+T lymphocytes in response to [0805] (1) HCMV antigens (viral lysate), and [0806] (2) the heterologous antigen. [0807] In addition, in patients in which appropriate HLA haplotypes can be defined, CD8+ T lymphocyte responses are assayed using flow cytometry following ex-vivo stimulation of mononuclear cells with the heterologous antigen and CMV antigens pp65, IE-1 and gB.
Protection
[0808] The vaccination is considered successful if positive serological responses to the heterologous antigen and optionally also the HCMV-specific antigens are detected. More specifically, a serological response is considered positive if a more than 4-fold rise in antibody levels is detected and/or if viral nucleic acids are detected in the urine.
[0809] The results of these studies are quantified and compared to identical studies carried out at 6, 12, and 24 months following vaccination.
[0810] Surrogates of vaccine efficacy include antibody levels reactive with the heterologous antigen and more importantly CD8+ T lymphocyte responses for the heterologous antigen.
Example 22
Treatment of a Human Subject Using a Rrecombinant HCMV Expressing Influenza Hemagglutinin Protein
[0811] A 25 year old female human subject is treated in accordance with the general protocol of Example 21, whereby the recombinant HCMV expresses influenza hemagglutinin protein. The recombinant HCMV expressing influenza hemagglutinin protein, as described in Example 1 herein, is administered subcutaneously in a phosphate-buffered saline solution containing 50 infectious units of the recombinant HCMV.
[0812] A blood sample is taken from the subject at day 30 post vaccination and the titer of antibody against HCMV-specific protein and against the influenza hemagglutinin protein is determined by ELISA. A significant antibody immune response against both HCMV-specific protein and against the influenza hemagglutinin protein is detected.
[0813] Furthermore, a blood sample is taken from the subject two months post vaccination and proliferation of both CD8.sup.+ T lymphocytes and CD4.sup.+ T lymphocytes in response to (1) HCMV antigens (viral lysate), (2) influenza hemagglutinin protein and (3) ULBP2 is observed.
[0814] The HCMV-ULBP2 HA vaccine elicits cross-reactive anti-HA2 antibodies and anti-HA2 CD8.sup.+ T cells superior than the response detected in human subjects during natural influenza infection or subjects vaccinated with conventional vaccines against seasonal influenza. Quality of T cell response is determined by ELISPOT and flow cytometry on PBMC isolated prior to vaccination and following vaccination during the outbreak of seasonal influenza epidemics or after vaccination with conventional seasonal influenza vaccine. T cell response induced by HCMV-ULBP2 expressing HA are considered successful if superior than specific T cell response in control subjects, i.e. individuals after vaccination with conventional seasonal influenza vaccine and subjects after natural influenza infection. The subjects vaccinated with HCMV-ULBP2 HA headless vaccine develop serum neutralizing anti-HA2 antibodies against the epitopes which are not induced neither by infection with HCMV-ULBP2 expressing full-length HA nor during the natural influenza infection. Such “unnatural” response to unmasked conserved HA epitope is beneficial over conventional vaccines with regard to cross-protective capacity against various influenza virus strains.
Example 23
Treatment of a Human Subject Using a Recombinant HCMV Expressing HIV-1 Gag
[0815] A 25 year old female human subject is treated in accordance with the general protocol of Example 21, whereby the recombinant HCMV expresses HIV-1 gag. The recombinant HCMV is administered subcutaneously in a phosphate-buffered saline solution containing 50 infectious units of the recombinant HCMV.
[0816] A blood sample is taken from the subject at day 30 post vaccination and the titer of antibody against HCMV-specific protein and against the HIV-1 gag is determined by ELISA. A significant antibody immune response against both HCMV-specific protein and against the HIV-1 gag is detected.
[0817] Furthermore, a blood sample is taken from the subject two months post vaccination and proliferation of both CD8.sup.+ T lymphocytes and CD4.sup.+ T lymphocytes in response to (1) HCMV antigens (viral lysate), (2) HIV-1 gag and (3) ULBP2 is observed.
[0818] For subjects vaccinated with HCMV-ULBP2 vaccine expressing HIV-1 gag antigen the successful T cell priming of gag-specific CD4+ and CD8+ T-cell responses is judged by ELISPOT and flow cytometry on PBMC isolated prior to vaccination and two months following vaccination. The obtained result is compared to the placebo group and the group of elite controllers of HIV infection. The vaccination is considered successful if the specific T cell responses are the same or exceeding the responses in the group of elite controllers of HIV infection.
Example 24
Treatment of a Human Subject Using a Recombinant HCMV Expressing Antigen 85A
[0819] A 25 year old female human subject is treated in accordance with the general protocol of Example 21, whereby the recombinant HCMV expresses Antigen 85A. The recombinant HCMV is administered subcutaneously in a phosphate-buffered saline solution containing 50 infectious units of the recombinant HCMV.
[0820] A blood sample is taken from the subject at day 30 post vaccination and the titer of antibody against HCMV-specific protein and against the Antigen 85A is determined by ELISA. A significant antibody immune response against both HCMV-specific protein and against the Antigen 85A is detected.
[0821] Furthermore, a blood sample is taken from the subject two months post vaccination and proliferation of both CD8.sup.+ T lymphocytes and CD4.sup.+ T lymphocytes in response to (1) HCMV antigens (viral lysate), (2) Antigen 85A and (3) ULBP2 is observed.
[0822] The vaccination with HCMV-ULBP2 expressing mTB Antigen 85 (Ag85) is considered successfull in the terms of eliciting similar or better immune response against M. Tuberculosis in the group vaccinated with HCMV-ULBP expressing Ag85 as compared to samples of patients with controlled mTB infections (i.e. patients exposed and infected but symptom free, without requirement for chemotherapy). Recall response in subjects receiving HCMV ULBP2 expressing Ag85 vaccine is considered successful if intradermal skin test response to mTB proteins is equal or better than in the unvaccinated group.
Example 25
RAE-1γMCMVList Provides Long-Term Protection Against Challenge Infection
[0823] The endurance of protective immunity is a prerequisite for an efficient protection against re-infection. To assess whether the vaccination with an MCMV vector expressing RAE-1γ provides a long-lasting protection against L. monocytogenes, BALB/c mice were f.p. infected with 1×10.sup.5 PFU of WT-MCMV, MCMVList, RAE-1γMCMVList, respectively, or left uninfected. 60 days post-vaccination groups of MCMVList or RAE-1γMCMVList infected, or uninfected BALB/c mice were challenged with 2×10.sup.4 CFU/mouse of L. monocytogenes.
[0824] The result is shown in
[0825] More particularly,
[0826] It may be taken therefrom that all unvaccinated mice succumbed to infection by day four, which was accompanied by a dramatic weight loss by day three post-challenge. Similar to this was the case of mice infected with wt MCMV, although few mice survived the infection by day four, confirming that persistent MCMV infection might have a protective effect against intracellular bacteria (Barton, E. S., 2007 supra.
[0827] Vaccination with MCMVList provided a substantial protection of the immunized mice, but these mice exhibited significant weight loss. All RAE-1γMCMVList-vaccinated mice survived the infection with minimal weight loss by day four post-challenge, once again suggesting that RAE-1γMCMVList vaccination retains a long-lived and protective memory CDS.sup.+ T cell response.
[0828] Mice that survived four days post challenge were sacrificed and the bacterial loads in liver and spleen were determined. Bacterial load in spleens of RAE-1γMCMVList vaccinated mice was below the limit of detection and significantly lower in livers when compared to WT-MCMV and MCMVList vaccinated mice.
[0829] In order to test whether RAE1γMCMVList-vaccinated mice could resist the challenge with higher doses of L. monocytogenes, vaccinated mice were challenged with 4×10.sup.4 CFU/mouse and monitored for survival.
[0830] The result is shown in
[0831] More particularly,
[0832] It may be taken therefrom that while all unvaccinated mice succumb to infection and MCMVList vaccinated mice began to die by day 4 post challenge, all RAE-1γMCMVList vaccinated mice survived the challenge.
[0833] The efficient and long-lasting protective capacity of the LLO-specific CD8.sup.+ T cell response in mice vaccinated with RAE-1γMCMVList was confirmed by assessing the LLO-specific CD8+ T cell-mediated cytotoxicity in vivo.
[0834] The result is shown in
[0835] More particularly,
[0836] It may be taken therefrom that listeriolysin-specific killing was significantly higher up to 11 months post-vaccination in mice vaccinated with RAE-1γMCMVList compared to those vaccinated with MCMVList.
Example 26
RAE-1γ Expression by MCMV is Crucial for its Vaccine Vector Capacity
[0837] To test the possibility that an enhanced LLO-specific CD8.sup.+ T cell response in RAE-1γMCMVList-infected mice is entirely a consequence of the deletion of the m152 gene, whose protein product (m152/gp40) not only down-regulates the expression of MHC I molecules but also RAE-1, a virus expressing the LLO epitope on the backbone of the m152-deficient virus (Δm152MCMVList) was constructed.
[0838] BALB/c mice were infected with 2×10.sup.5 PFU/mouse i.v. of the indicated viruses. On day 8 post infection viral titer in lungs was determined.
[0839] The result is shown in
[0840] More particularly, in
[0841] It may be taken therefrom, that Δm152MCMVList showed attenuated growth in vivo, but the attenuation was much stronger with RAE-1γMCMVList.
[0842] BALB/c mice were infected with 1×10.sup.5 f.p. of the indicated viruses. The frequency of LLO-specific CD8.sup.+ T cells was determined on day 7 p.i.
[0843] The result is shown in
[0844] More particularly, in
[0845] It may be taken therefrom that the LLO-specific CD8.sup.+ T cell response in mice infected with Δm152MCMVList was similar to that induced by MCMVList, confirming that an enhanced CD8.sup.+ T cell response in RAE-1γMCMVList-infected mice was predominantly a consequence of ectopic expression of RAE-1γ rather than the deletion of immune evasion gene m152.
[0846] In connection therewith it has to be acknowledged that co-stimulation via NKG2D plays an important role in shaping the CD8.sup.+ T cell response (Markiewicz, M. A., et a12005, “ J Immunol 175(5): 2825-33; Barber, A. and C. L. Sentman,2011, Blood 117(24): 6571-81). This function may be of central importance for the success of RAE-1γMCMV as a vaccine vector, since MCMV down-regulates co-stimulatory molecules on antigen-presenting cells similarly to HCMV (Loewendorf, A., et al. 2004 J Virol 78(23): 13062-71; Mintern, J. D., et al. 2006, J Immunol 177(12): 8422-31; Arens, R., et al. 2011, J Virol 85(1): 390-6) and RAE-1-NKG2D interaction may rescue the co-stimulation signals during T cell priming.
[0847] BALB/c mice were infected with 2×10.sup.5 i.v. of WT-MCMV; MCMVList or RAE-1γMCMVList, respectively. One day before infection and on days 2 and 4 p.i. mice were treated with NKG2D blocking antibody
[0848] The result is shown in
[0849] More particularly,
[0850] It may be taken therefrom that NKG2D stimulation by MCMV is important for the listeriolysin-specific CD8+ T cells generation.
[0851] More particularly, blocking of NKG2D by specific monoclonal antibodies significantly reduced the control of RAE-1γMCMVList at day 3 post-infection (see
[0852] BALB/c mice were infected with 2×10.sup.5 i.v. of MCMVList, RAE-1γMCMVList or left untreated (naïve). On days 4 and 8 post infection mice were injected with 2 mg of BrdU/mouse and sacrified 2 h later.
[0853] The frequency of BrdU.sup.+ total CD8.sup.+ T cells, the frequency of LLO-specific CD8.sup.+ T cells and the frequency of BrdU.sup.+ LLO-specific CD8.sup.+ T cells was determined.
[0854] The result is shown in
[0855] More particularly,
[0856] It may be taken therefrom that RAE-1γ expression promotes listeriolysin-specific CD8.sup.+ T cells priming. The preserved frequency of DCs during the early days of infection corresponds to the enhanced priming of CD8.sup.+ T cells in RAE-1γMCMVList-infected mice, which is illustrated by the higher frequencies and proliferation capacity of LLO-specific CD8.sup.+ T cells.
[0857] Altogether, the above data demonstrates that the expression of the NKG2D ligand RAE-1γ by CMV vectors promotes the priming of an epitope-specific CD8.sup.+ T cell response.
Example 27
RAE-17MCMV is an Efficient Vaccine Vector in C57BL/6 Mice
[0858] To exclude the possibility that the robustness of the CD8.sup.+ T cell response after infection with RAE-1γMCMVList vector was restricted to a single MHC I haplotype, a recombinant RAE-1γMCMV and wt MCMV expressing the H-2K.sup.b restricted peptide SIINFEKL instead of m164 epitope were constructed as described in Example 1 above, referred to herein as RAE-1γMCMV-SIINFEKL and MCMV-SIINFEKL, respectively (Rotzschke, O., et al. 1991),Eur J Immunol 21(11): 2891-4).
[0859] Growth kinetics of MCMV-SIINFEKL and REA-1γMCMV-SIINFEKL were compared to WT-MCMV.
[0860] More particularly, MEF cells were infected with wt MCMV, MCMV-SIINFEKL or RAE-1γMCMV-SIINFEKL at 0.1 PFU per cell. Supernatants were harvested at indicated time p.i. and virus titers were determined by plaque assay.
[0861] The result is shown in
[0862] It may be taken therefrom that the expression of SIINFEKL peptide did not impair the virus growth in vitro.
[0863] C57BL/6 (H-2b) mice were infected with the viruses expressing SIINFEKL via footpad or intravenous route and kinetics of SIINNFEKL- and virus-specific CD8.sup.+ T cell response was followed up to three months post infection.
[0864] The results are shown in
[0865] More particularly,
[0866] SIINFEKL- and MCMV-specific CD8.sup.+ T cell response has been followed for 89 days. IFNγ.sup.+ CD8.sup.+ T cell response, as a result of indicated peptides stimulation, is shown for individual animals as triangles. Median values are shown as bars.
[0867]
[0868] It may be taken therefrom that in agreement with the results obtained in BALB/c mice, the infection of C57BL/6 mice with RAE-1γMCMV-SIINFEKL resulted in a stronger CD8.sup.+ T cell response to SIINFEKL compared to the virus expressing SIINFEKL only. The CD8.sup.+ T cell response to some MCMV immunodominant epitopes was also higher in RAE-1γMCMV-SIINFEKL infection, which confirms the previously published data (Slavuljica, I., et al. 2010, J Clin Invest 120(12): 4532-45).
[0869] To assess the protective capacity of RAE-1γ expressing MCMV vector in C57BL/6 mice, mice were immunized with 10.sup.5 PFU/mouse f.p. with viruses expressing SIINFEKL either with or without RAE-1γ co-expression and were challenged with low and high dose of Listeria expressing ovalbumin (OVA-Listeria) three weeks later.
[0870] Four days post challenge bacterial load in spleen and liver was determined.
[0871] The result is shown in
[0872] More particularly,
[0873] It may be taken therefrom that contrary to a modest protective capacity in BALB/c mice immunized with MCMVList, the protective response of C57BL/6 mice immunized with MCMV-SIINFEKL was much stronger, to the point that the beneficial effect of RAE-1γMCMV-SIINFEKL vaccination was hardly visible. However, the beneficial effect of RAE-1γ expression became evident after a challenge infection of mice with a higher dose of OVA-Listeria.
[0874] Previous studies showed that cross-presentation plays a dominant role in the priming of CD8.sup.+ T cells during MCMV infection. The present inventor proposes that MCMV expressing RAE-1γ favors direct priming due to dramatically lowered antigenic load which should reduce the cross-priming capacity of such a virus. To test the role of direct presentation in infection with the virus expressing RAE-1γ 3d mice which are defective in TLR3, TLR7 and TLR9 signaling and unable to cross-present foreign antigens (Tabeta, K., et al. 2006, Nat Immunol 7(2): 156-64).
[0875] C57BL/6 and 3d mice were infected with 2×10.sup.5 PFU/mouse i.p. of either MCMV-SIINFEKL or RAE-1γMCMV-SIINFEKL, or left uninfected. Seven days post infection the frequency of SIINFEKL-specific as well as MCMV-specific CD8.sup.+ T cells was determined 7 days later, and viral titer in lungs was determined.
[0876] The result is shown in
[0877] More particularly,
[0878]
[0879] It may be taken therefrom that RAE-1γ expression by MCMV vector promotes direct priming of vectored antigen-specific CD8+ T cells.
[0880] Although both viruses induced an epitope-specific CD8.sup.+ T cell response, the response induced by RAE-1γMCMV-SIINFEKL was slightly better than the one in mice infected with MCMV-SIINFEKL. Thus, the absence of cross-presentation does not compromise the robust CD8.sup.+ T cell response to the viruses expressing RAE-1. In addition, RAE-1γMCMV-SIINFEKL was readily controled in MCMV sensitive 3d mice when compared to MCMV-SIINFEKL.
Example 28
Influenza Challenge Experiments
[0881] C57BL/6 mice were immunized with 2×10.sup.5 PFU/mouse f.p. of the Δm157 MCMV, MCMV-HA or RAE-1γMCMV-HA, or left non-immunized. Three weeks post immunization mice were intranasally challenged with either high or low dose (100 HU) of human influenza virus A/Puerto Rico/8/34 H1N1, also referred to herein as A/PR8. A/PR8 was generated as previously described (Achdout, H., et al. 2003 J Immunol 171(2): 915-23). For the low dose, 40 hemagglutinin units (HU) of PR8 virus were used. Mice were monitored daily for survival and weight loss.
[0882] The result is shown in
[0883] More particularly, in
[0884] In
Example 29
Vector Capacity of RAE-1γMCMV-CD8 Epitope of RSV
[0885] BALB/c mice were infected with 10.sup.5 PFU/mouse f.p. of MCMV-SYI or RAE-1y-MCMV-SYI or left uninfected and SYIGSINNI-specific CD8.sup.+ T cell response has been followed.
Generation of Recombinant Viruses Expressing Respiratory Syncytial Virus (RSV) M2-Derived Peptide SYIGSINNI.
[0886] Recombinant plasmids were constructed according to established procedures, and enzyme reactions were performed as recommended by the manufacturers. Throughout, the fidelity of PCR-based cloning steps was verified by sequencing (GATC, Freiburg, Germany). [0887] Design of insert containing peptide swap.
[0888] Primers were constructed in a way to replace the Dd-restricted antigenic m164 peptide 167-AGPPRYSRI-175 with the Kd-restricted M2-derived peptide 82-SYIGSINNI-90.
[0889] The primers were m164 SYI fw (5′-cgcccgctgccacgatggcctggttgttgacggcccagaagatgttgttgatcgagccgatgtagctgtcagcgccccaGCCAGT GTTACAACCAATTAACC-3′) (lower case letters represent homology region to m164 ORF in MCMV genome, bold underline letters represent introduced epitope SYIGSINNI, bold italic letters homology regions between primers and capital letters represent homology to Tischer kanamycin cassette) and m164 SYI rv (5′-gccgttcggaaaggactactgtcggacgtggggcgctgacagctacatcggctcgatcaacaacatcTAGGGATAACAG GGTAATCGAT-3′) (lower case letters represent homology region to m164 ORF in MCMV genome, bold underline letters represent introduced epitope SYIGSINNI, bold italic letters homology regions between primers and capital letters represent homology to Tischer kanamycin cassette). PCR was performed with the following cycler conditions: an initial step for 2 min at 98° C. for activation of HighFidelity Phusion DNA polymerase (New England BioLabs) was followed by 30 cycles of 10 s at 98° C., 10 s at 60° C., and 60 s at 72° C. As DNA template plasmid pEP-SaphAI, a kind gift from K. Tischer was used. (ii) BAC mutagenesis.
[0890] For the construction of recombinant mutants en passant mutagenesis; a two step markerless red recombination system was utilized, as described by Tischer, B. K. et al, 2010, supra. Mutagenesis of full-length mCMV bacterial artificial chromosome (BAC) and dm152-RAE1γ mCMV BAC was performed in Escherichia coli strain DH10B, whereas excision of the selection marker was performed in Escherichia coli strain GS1783.
[0891] The result is shown in
[0892] More particularly,
[0893] It may be taken therefrom that the frequency of SYIGSINNI-specific CD8.sup.+ T cells is higher in mice infected with MCMV-SYI or RAE-1γ-MCMV-SYI compared to uninfected mice.
[0894] The frequency of SYIGSINNI-specific CD8.sup.+ T cells increases from day 7 to day 14 p.i. in mice infected with MCMV-SYI or RAE-1γ-MCMV-SYI.
[0895] The frequency of SYIGSINNI-specific CD8.sup.+ T cells in RAE-1γ-MCMV-SYI infected mice is higher compared to MCMV-SYI infected mice.
[0896] The features of the present invention disclosed in the specification, the claims, the sequence listing and/or the drawings may both separately and in any combination thereof be material for realizing the invention in various forms thereof.