Flow-valve diagnostic microfluidic system
09739718 · 2017-08-22
Assignee
Inventors
- Adam T. WOOLLEY (Orem, UT, US)
- Debolina Chatterjee (Provo, UT, US)
- Danielle Scarlet Mansfield (Mapleton, UT, US)
Cpc classification
B01L2400/084
PERFORMING OPERATIONS; TRANSPORTING
B01L3/502746
PERFORMING OPERATIONS; TRANSPORTING
International classification
G01N33/543
PHYSICS
Abstract
A system for detecting concentration of a target in a solution where sample fluid is passed into a microchannel with wall coated with the receptor that reacts and crosslinks with the target to constrict the channel and slow or stop sample flow through the microchannel. Concentration of the target is determined by measuring length of the sample filled channel.
Claims
1. A fluidic device for measuring concentration of a target in solution comprising: a microchannel in a material, the microchannel having an inlet at a first end; at least the portion of the walls of the microchannel near the first end coated with a receptor, the receptor reactive with the target to form a cross-linked coating; the material at at least the first end of a deformable material, and the microchannel at at least the first end having a geometric cross-section, the cross-section and the deformable material such that the microchannel is deformable and constrictable by a progressing crosslinking between opposing wall surfaces where crosslinking between opposing wall surfaces deforms the microchannel to constrict the microchannel until closure of the microchannel to provide a concentration flow valve effect where flow distance of the solution in the microchannel until closure depends on concentration of the target; the microchannel and material having properties to show visual contrast between a portion of the microchannel filled with solution, and a portions of the microchannel not filled with solution.
2. A fluidic device for measuring concentration of a target in solution comprising: a microchannel in a material, the microchannel having an inlet at a first end; at least the portion of the walls of the microchannel near the first end coated with a receptor, the receptor reactive with the target to form a cross-linked coating; the material at at least the first end of a deformable material, and the microchannel at at least the first end having a geometric cross-section, the cross-section and the deformable material such that target-mediated crosslinking of receptors on opposing surfaces of the microchannel deform the cross-section to make capillary flow distance of solution in the microchannel dependent on target concentration; the microchannel and material having properties to show visual contrast between a portion of the microchannel filled with solution, and a portions of the microchannel not filled with solution.
3. The device of claim 2 wherein the cross-section of the microchannel at the first end is a geometric shape with at least two acute angles.
4. The device of claim 2 wherein the cross-section of the microchannel at the first end is semicircular.
5. The device of claim 2 wherein the device comprises one or more micropattern calibration markings for measuring length of the microchannel filled with solution.
6. The device of claim 2 wherein the deformable material comprises an elastomer.
7. The device of claim 2 wherein the deformable material comprises polydimethylsiloxane.
8. The device of claim 7 wherein the polydimethylsiloxane above the channel has a thickness between 0.4-1.0 mm.
9. The device of claim 2 wherein the deformable material comprises a fluoroelastomer.
10. The device of claim 2 wherein channel height is between 1 and 50 microns.
11. The device of claim 2 wherein channel height is between 5 and 20 microns.
12. The device of claim 2 wherein the channel length is between 10 and 1000 mm.
13. The device of claim 2 wherein the channel length is between 20 and 200 mm.
14. The device of claim 1 wherein receptor can react with at least two sites on the target.
15. A method of detecting the concentration of a target in a solution comprising: directing a solution containing the target into the inlet of a microchannel, at least the portion of the walls of the microchannel near the first end coated with a receptor, the receptor reactive with the target to form a cross-linked coating; the microchannel cross-section at at least the first end having a geometric cross-section and of a deformable material such that the microchannel is deformable and constrictable by product of target-mediated crosslinking of the receptor and target on adjacent surfaces; continuing flow of the solution into the microchannel as the crosslinked product of the receptor and product forms in the channel and deforms and constricts the channel to provide a concentration flow valve effect where capillary flow distance of solution in the microchannel depends on target concentration; measuring the concentration of the target in the solution by visually observing and measuring length of the portion of the microchannel filled with solution.
16. The method of claim 15 wherein the concentration is measured after the flow of the solution has stopped or is insignificant.
17. The method of claim 15 wherein the concentration is measured after a predetermined time of flow.
18. The method of claim 15 where viscosity of the sample is between 1 and 4 cP.
19. The method of claim 15 wherein receptor can react with at least two sites on the target.
Description
BRIEF DESCRIPTION OF DRAWINGS
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DETAILED DESCRIPTION
Example I
(7) Immediately after plasma bonding and oxidation, the microchannels of the flow valve devices were filled with biotinylated-bovine serum album (biotinylated-BSA, Thermo Scientific, Rockford, Ill., 2 mg/mL in 0.14 mM citrate buffer, pH 6.8) by capillary action. The biotinylated-BSA was allowed to adsorb to the channel walls for 15 min. After that time period, unadsorbed biotinylated-BSA was flushed from the channel using phosphate buffered saline (PBS, 10 mM, pH 7.2). Last, PBS was removed from the channel and 1 μL of streptavidin solution (New England Biolabs, Ipswich, Mass.) of known concentration in PBS was pipetted into the reservoir. Flow distance was recorded with a ruler and images were obtained with a digital camera.
(8) Results indicated that log.sub.10 [streptavidin] and flow distance share a linear relationship. Therefore, for a given device design, one is able to create a standard curve and subsequently determine the concentration of unknown samples by measuring flow distance.
(9) An aspect is a method that involves the capillary flow of target solution through a receptor-coated microchannel in a deformable material, which leads to channel constriction and flow stoppage due to target-receptor interaction. Importantly, in this “flow-valve” method, the distance of capillary flow is correlated with the target's concentration, and the ability to differentiate between filled and empty channels visually enables detectorless determination of flow distance, and hence target concentration. Polydimethylsiloxane (PDMS) devices have been fabricated and tested them with the model target-receptor system of streptavidin and biotin. Furthermore, three factors were studied that affect assay performance: solution viscosity, device material thickness and channel height. The concentration dependence of flow distance and assayed streptavidin solutions as dilute as 1 ng/mL has been measured. Finally, the mechanism of channel closure in these assays was evaluated. Notably, the “flow valve” approach should be adaptable to various target-receptor pairs, offering a very broadly applicable analysis method.
(10) Experimental Section
(11) Mold Design and Preparation.
(12) Molds were prepared using a 500 μm thickness, 10 cm diameter glass wafer (
(13) PDMS Device Fabrication.
(14) Devices were fabricated by casting PDMS against the positive relief mold. PDMS (Dow Corning, Centennial, Colo.) was prepared by mixing the base and curing agent in a 10:1 ratio, pouring it on the mold to a thickness of 0.45-1.1 mm (
(15) Procedure for Experimentation.
(16) Experiments were carried out on a biotin-streptavidin model system using the general protocols given here. The water-filled microchannel was first aspirated and then filled with biotinylated bovine serum albumin (b-BSA, Thermo Scientific, Rockford, Ill., 2 mg/mL in 0.14 mM citrate, pH 6.8) or a control solution of BSA (Sigma-Aldrich, St. Louis, Mo., 2 mg/mL in phosphate buffered saline) via capillary action. The b-BSA was allowed to adsorb to the PDMS channel walls for 15 min, leaving exposed biotin groups. Then, the b-BSA solution was removed and the channel was flushed with phosphate buffered saline (PBS, 10 mM, pH 7.2) to remove unadsorbed material. Finally, PBS was aspirated from the channel and a 1 μL streptavidin solution (New England Biolabs, Ipswich, Mass.) of specified concentration in PBS was pipetted into the reservoir (see
(17) Flow Restriction Mechanism.
(18) Fluorescein sodium salt (80 ng/mL, Spectrum, Gardena, Calif.) in PBS was mixed with unlabeled streptavidin or BSA as a control (both 500 μg/mL in PBS) and allowed to flow in 13 μm tall biotin-modified microchannels. Fluorescence signal was monitored using a CCD camera (CoolSNAP HQ2, Photometrics, Tucson, Ariz.) attached to an upright microscope (Axio Scope, A1, Zeiss, Thornwood, N.Y.). Illumination was provided by a 625 mW LED (MBLED, Thorlabs, Newton, N.J.) that passed through a filter cube (FITC-LP01-Clinical-OMF, Semrock, Rochester, N.Y.). Images were acquired using a 400 ms exposure time. Image acquisition and data analysis were performed using Image J software. The fluorescence signal from fluorescein in these images, integrated across the channel at different flow distances, was obtained. From these traces, background subtracted, normalized channel fluorescence signal peak areas (proportional to channel cross sectional areas) were obtained for flow solutions containing either streptavidin or BSA (control).
(19) Contact angles of streptavidin solution droplets of different concentrations on biotinylated PDMS substrates were measured using a contact angle goniometer (Rame-Hart, Succasunna, N.J.).
(20) Results and Discussion
(21) Experiments on a model system, biotin-streptavidin, were conducted to test the devices and enable their optimization. Studied were the effects on flow distance of channel height and shape, PDMS cover layer thickness, and solution viscosity. The mechanism through which channel closure affects flow was also probed.
(22) Initial experiments were conducted on 35 mm long, 58 μm wide channels with a 1.1 mm thick PDMS cover layer. Channels with a height <5 μM usually became blocked by the flow of only water or during coating with b-BSA, either because of channel deformation due to capillary forces or due to surface crosslinking during BSA adsorption. In a revised device design with slightly taller microchannels (5.2 μm) and a PDMS cover layer thickness of 0.7 mm, a 1.0 mg/mL streptavidin solution traveled 10 mm, and a 0.88 mg/mL streptavidin solution traveled 15 mm, while solutions lacking streptavidin flowed the full length (35 mm) of the b-BSA coated channel. When glycerol was added to a 28% concentration, a solution with a streptavidin concentration of 60 μg/mL flowed 30 mm in a 5.2 μm tall channel with a 0.7 mm PDMS cover layer thickness. These experiments identified three assay parameters (channel height, cover layer thickness and solution viscosity) that could be altered to affect the dynamic range and limit of detection for “flow valve” experiments. Reproducible results for these initial device designs were still somewhat difficult to obtain, which was attributed to the above-noted blockage issues associated with relatively shallow channels.
(23) A curved channel cross-section (
(24) Building on these initial studies, Further characterization was made of the three factors that affected channel closure: solution viscosity, PDMS cover layer thickness and channel height. One parameter was varied while holding others constant and observed any effects on the flow distance. Also, taller (13-17 μm) channels were used to avoid some of the issues previously seen with shallower ones. When a higher streptavidin concentration (10 μg/mL) was introduced into a biotin-modified channel (
(25) The effect of solution viscosity on the flow distance was studied with other variables held constant. Added glycerol adjusted the solution viscosity, and control solutions containing glycerol but lacking streptavidin flowed the entire length of the microchannels.
(26) The effect of PDMS cover layer thickness on the flow distance was also studied with all other parameters held constant.
(27) The correlation was explored between flow distance and streptavidin concentration for two different channel heights. A plot of flow distance for various streptavidin solution concentrations in biotin-modified 13 μm tall channels is given in
(28) Several plausible explanations were evaluated and eliminated for the observed flow behaviors that do not involve channel constriction. Measured were contact angles of solutions of different streptavidin concentrations (1 ng/mL-100 μg/mL) on b-BSA coated PDMS to be 25-26°. Thus, the mechanism of flow stoppage is clearly not linked to concentration-dependent changes in surface wettability or tension. In addition, flow experiments on buffer solutions lacking streptavidin were performed in 13 μm tall b-BSA coated PDMS microchannels with 0.45 and 0.5 mm cover layers. These solutions flowed the entire channel length, indicating that the flow stoppage was not due to any pressure drop or channel constriction caused by capillary action. In addition, flow is unaffected by non-specific adsorption, as streptavidin solutions from 1 ng/mL-100 μg/mL) in 13 μm tall channels coated with BSA (lacking biotin) flowed the entire channel distance. Thus non-specific adsorption, which is a significant problem for conventional immunoassays, appears not to play a major role in the flow valve devices, showing promising potential for extension to other assay systems.
(29) Further explored was the mechanism of flow stoppage via channel closure using fluorescent imaging. After capillary flow of a solution containing streptavidin mixed with the unreactive small molecule marker fluorescein in a b-BSA-coated channel, the fluorescence in the first 10 mm of the microchannel was imaged to observe any differences due to constriction (
(30) Receptors must recognize at least two distinct sites on the target to crosslink channels. Streptavidin readily meets this criterion with four biotin binding sites. Polyclonal antibodies or two different monoclonal antibodies to a target would recognize different epitopes and should also cause receptor-mediated crosslinking of microchannels in response to an antigen target. Additionally, hybridization of a target nucleic acid sequence to complementary surface-attached single-stranded oligonucleotides should mediate microchannel closure. Are antigen-antibody or base pairing interactions strong enough to develop “flow valve” assays? The unbinding forces for target-receptor pairs have been studied by scanning probe microscopy, and were 200-300 pN.sup.25, 26 per biotin-streptavidin molecular pair. The measured unbinding force for a single antigen-antibody pair is 50-60 pN,.sup.27-29 which is less than biotin-streptavidin by a small factor of 3-6 that could likely be accommodated through adjusting device parameters. The unbinding force for hybridized DNA oligonucleotides, depending on the sequence and number of base pairs, ranges from 450 pN.sup.30 for 14-mer sequences to 2700 pN for 20-base-long hybridized pairs..sup.31 These published unbinding data affirm the likely feasibility of generalization of “flow valve” systems beyond biotin-streptavidin measurements to nucleic acid hybridization and antigen-antibody interactions.
(31) A key question regarding flow valve assays is the following: how can molecular-scale (˜10 nm) surface interactions translate into much larger, micrometer-dimension alterations in microchannel diameter that can affect flow? It is believed that the answer can be found in the data in
(32) Conclusions
(33) Demonstrated is a detectorless microfluidic approach for quantifying target analytes through simple visual inspection of capillary flow distance in a microchannel. Identified and characterized are three important parameters (solution viscosity, PDMS cover layer thickness and channel height) that affect the flow distance in these assays for the biotin-streptavidin model system. In addition, found was a linear relationship between flow distance in biotin-modified channels and logarithm of streptavidin concentration over a 100,000-fold range of concentrations. Moreover, identified and studied is a plausible mechanism of channel constriction and how this leads to concentration-dependent flow distances. Importantly, streptavidin concentrations were measured as low as 1 ng/mL using these microsystems, demonstrating low detection limits, with potential for future improvement. “Flow valve” microfluidic devices show great promise for simplified, low cost, but high performance chemical analysis that could be extended to antigen and nucleic acid determinations. “Flow valve” systems are especially promising for POC testing due to their portability, and detectorless and label-free quantitation.
Example II
(34) Microdevices were constructed essentially as in Example I, except the receptors were antibodies attached to the PDMS surface by a silanization technique where the PDMS was modified with 3-glycidoxytrimethoxypropylsilane (COPS), to which antibodies were attached by reacting the COPS epoxy end groups with amine groups on antibodies. The microdevices were tested, and concentration of the target was determined by measurement of the distance of sample flow along the channel after a predetermined time.
Example III
(35) Microdevices are constructed essentially as in Example II, except the receptors are amine-modified nucleic acids that are reacted with the GOPS-silanized PDMS surface.
(36) While this invention has been described with reference to certain specific embodiments and examples, it will be recognized by those skilled in the art that many variations are possible without departing from the scope and spirit of this invention, and that the invention, as described by the claims, is intended to cover all changes and modifications of the invention which do not depart from the spirit of the invention.
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