Method and system for studying biological cells
11207684 · 2021-12-28
Assignee
Inventors
Cpc classification
B01L2200/0652
PERFORMING OPERATIONS; TRANSPORTING
B01L7/00
PERFORMING OPERATIONS; TRANSPORTING
G01N2291/0426
PHYSICS
B01L3/50273
PERFORMING OPERATIONS; TRANSPORTING
G01N2291/02809
PHYSICS
G01N29/348
PHYSICS
G01N2291/0256
PHYSICS
B01L2400/0436
PERFORMING OPERATIONS; TRANSPORTING
International classification
B01L3/00
PERFORMING OPERATIONS; TRANSPORTING
G01N21/17
PHYSICS
B01L7/00
PERFORMING OPERATIONS; TRANSPORTING
G01N29/22
PHYSICS
Abstract
A method of manipulating and/or investigating cellular bodies (9) is provided. The method comprises the steps of: providing a sample holder (3) comprising a holding space (5) for holding a fluid medium (11); providing a sample (7) comprising one or more cellular bodies (9) in a fluid medium (11) in the holding space (5); generating an acoustic wave in the holding space exerting a force (F) on the sample (7) in the holding space (5). The method further comprises providing the holding space (5) with a functionalised wall surface portion (17) to be contacted by the sample (7) and the sample (7) is in contact with the functionalised wall surface portion (17) during at least part of the step of application of the acoustic wave. A system and a sample holder (3) are also provided.
Claims
1. A method of manipulating and/or investigating cellular bodies, comprising the steps of: providing a sample holder comprising a holding space for holding a fluid medium; providing a sample comprising one or more cellular bodies in a fluid medium in the holding space; wherein the method comprises providing the holding space with a functionalised wall surface portion to be contacted by the sample and wherein the sample is in contact with the functionalised wall surface portion during at least part of a step of generating an acoustic wave in the holding space; wherein the method comprises generating the acoustic wave in the holding space exerting a force on the one or more cellular bodies of the sample in the holding space in a direction away from the functionalised wall surface portion, and urging the one or more cellular bodies of the sample in the holding space in a direction away from the functionalised wall surface portion by the force, and wherein the method further comprises determining a relation between the force and an adhesion strength of one or more of the cellular bodies to the functionalised wall surface portion.
2. The method of claim 1, comprising at least one of introducing sample fluid into the holding space and/or removing sample fluid from the holding space, wherein in particular the introduced sample fluid may comprise one or more of the cellular bodies.
3. The method of claim 1, wherein the functionalised wall surface portion is provided with one or more primers.
4. The method of claim 1, comprising varying at least one of one of frequency and amplitude of the acoustic wave in the holding space.
5. The method of claim 1, comprising the step of detecting and/or monitoring at least one property of at least one of the cellular bodies wherein the at least one property comprises, or is, at least one of: cell integrity, adhesion of a cellular body to at least part of the functionalised wall surface portion, motion of at least one of the cellular bodies, fluorescence emission, viability signs of at least one of the cellular bodies, and wherein the step of detecting and/or monitoring comprises at least one of: optical detection, e.g. a light intensity detection and/or optical imaging, by one or more of photographing, filming, microscopy; and acoustic detection, e.g. surface acoustic detection.
6. The method of claim 1, comprising at least one of: cell sorting; tracking motion of one or more cellular bodies as a function of at least one of acoustic force, flow of sample fluid and composition of sample fluid; monitoring an optical activity of one or more of the cellular bodies; varying a temperature and/or a temperature profile of the sample holder; varying an illumination and/or illumination profile of the sample holder; and varying a composition of the sample fluid.
7. The method of claim 1, wherein the method comprises the step of quantifying the adhesion strength between at least one of the cellular bodies and the functionalized surface portion.
8. A manipulation system for investigating cellular bodies, comprising: a sample holder comprising a holding space for holding a sample comprising one or more cellular bodies in a fluid medium, an acoustic wave generator connectable or connected with the sample holder to generate an acoustic wave in the holding space exerting a force on the one or more cellular bodies of the sample, when log acted in the holding space, in a direction away from the functionalised wall surface portion and a controller; wherein the sample holder comprises a wall providing the holding space with a functionalised wall surface portion to be contacted, in use, by at least part of the sample; wherein the acoustic wave generator is configured to exert the force on the one or more cellular bodies of the sample in the holding space, when comprised in the holding space, in the direction away from the functionalised wall surface portion; wherein the controller is configured to determine as a function of the force in the direction away from the functionalised wall surface portion, one or both of an amount of cellular bodices adhered to the functionalised wall surface portion, and an adhesion strength of one or more of the cellular bodies to the functionalised wall surface portion.
9. The manipulation system of claim 8, wherein the functionalised wall surface portion is provided with one or more primers.
10. The manipulation system of claim 8, wherein the functionalised wall surface portion comprises plural mutually differently functionalised wall surface portions to be contacted by the sample.
11. The manipulation system of claim 8, wherein the sample holder is connected or connectable to a flow system for introducing a fluid and/or a gas into the holding space and/or for removing a fluid and/or a gas from the holding space, e.g. for flowing fluid through the holding space, in particular wherein in particular the fluid and/or the gas comprises sample material, e.g. sample fluid and/or one or more cellular bodies.
12. The manipulation system of claim 8, wherein the acoustic wave generator is controllable to adjust at least one of frequency and amplitude for generating adjustable acoustic waves in the holding space, preferably time-dependent, wherein in particular the acoustic wave is a standing wave.
13. The manipulation system of claim 8, wherein the system comprises a detector for detecting a response of the one or more cellular bodies to the acoustic wave, wherein the detector may comprise one or more of an acoustical detector, e.g. a piezo-element, and an optical detector, e.g. a photodiode, an array of photodiodes a camera and/or a microscope.
14. The manipulation system of claim 8, wherein the system comprises one or more of a light source; a memory for storing data indicative of operation of the system and/or signals from the detector; a tracking system for tracking one or more of the cellular bodies, a controller connected or connectable with the detector for performing microscopy calculations and/or analysis associated with microscopy; a sensor and a controller connected or connectable with the acoustic wave generator for controlling operation of the acoustic wave generator in response to a signal from the sensor; and a thermal element, e.g. a Peltier element, for adjusting a temperature and/or a temperature profile of the sample holder.
15. The manipulation system of claim 8, comprising a detector to produce a digital image of a focal plane and wherein the system is provided with a calculation device to calculate a position of one or more of the cellular bodies in a direction perpendicular to the focal plane by processing of an interference pattern caused by one or more of the cellular bodies which are not in focus.
16. A sample holder for use in the method according to claim 1, comprising a holding space for holding a sample comprising one or more cellular bodies in a fluid medium, and an acoustic wave generator connected with the sample holder to generate an acoustic wave in the holding space exerting a force on the sample, wherein the sample holder comprises a wall providing the holding space with a functionalised wall surface portion to be contacted, in use, by at least part of the sample.
17. The method of claim 2, comprising flowing sample fluid through the holding space during at least part of the step of application of the acoustic wave.
18. The method of claim 3, wherein the one or more primers comprise one or more types of interaction moieties types selected from the group consisting of antibodies, peptides, biological tissue factors, biological tissue portions, bacteria, antigens, proteins, ligands, cells, tissues, viruses, (synthetic) drug compounds, lipid (bi)layers, fibronectin, cellulose, nucleic acids, RNA, small molecules, allosteric modulators, (bacterial) biofilms, “organ-on-a-chip”, and specific atomic or molecular surface portions (e.g. a gold surface) to which at least part of the sample tends to adhere with preference relative to other surface portions.
19. The method of claim 4, wherein the varying of at least one of one of frequency and amplitude of the acoustic wave in the holding space is time dependent.
20. The system of claim 9, wherein the one or more primers comprise one or more types of interaction moieties types selected from the group consisting of antibodies, peptides, biological tissue factors, biological tissue portions, bacteria, antigens, proteins, ligands, cells, tissues, viruses, (synthetic) drug compounds, lipid (bi)layers, fibronectin, cellulose, nucleic acids, RNA, small molecules, allosteric modulators, (bacterial) biofilms, “organ-on-a-chip”, and specific atomic or molecular surface portions (e.g. a gold surface) to which at least part of the sample tends to adhere with preference relative to other surface portions.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
(1) The above-described aspects will hereafter be more explained with further details and benefits with reference to the drawings showing a number of embodiments by way of example.
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DETAILED DESCRIPTION OF EMBODIMENTS
(12) It is noted that the drawings are schematic, not necessarily to scale and that details that are not required for understanding the present invention may have been omitted. The terms “upward”, “downward”, “below”, “above”, and the like relate to the embodiments as oriented in the drawings, unless otherwise specified. Further, elements that are at least substantially identical or that perform an at least substantially identical function are denoted by the same numeral, where helpful individualised with alphabetic suffixes.
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(14) The system 1 comprises a sample holder 3 comprising a holding space 5 for holding a sample 7 comprising one or more biological cellular bodies 9 in a fluid medium 11. The fluid preferably is a liquid or a gel. The system 1 further comprises an acoustic wave generator 13, e.g. a piezo element, connected with the sample holder 3 to generate an acoustic wave in the holding space 5 exerting a force on the sample 7 and cellular bodies 9 in the sample 7. The acoustic wave generator 13 is connected with an optional controller 14 and power supply, here being integrated.
(15) The sample holder 3 comprises a wall 15 providing the holding space 5 with a functionalised wall surface portion 17 to be contacted, in use, by part of the sample 7.
(16) The shown manipulation system 1 comprises a microscope 19 with an adjustable objective 21 and a camera 23 connected with a computer 25 comprising a controller and a memory. The computer 25 may also be programmed for tracking one or more of the cellular bodies based on signals from the camera 23 and/or for performing microscopy calculations and/or for performing analysis associated with superresolution microscopy and/or video tracking, which may be sub-pixel video tracking. The computer or another controller (not shown) may be connected with other parts of the system 1 (not shown) for controlling at least part of the microscope 19 and/or another detector (not shown). In particular, the computer 25 may be connected with one or more of the acoustic wave generator 13, the power supply thereof and the controller 14 thereof, as shown in
(17) The system further comprises a light source 27. The light source 27 may illuminate the sample 7 using any suitable optics (not shown) to provide a desired illumination intensity and intensity pattern, e.g. plane wave illumination, Köhler illumination, etc., known per se. Here, in the system light 31 emitted from the light source 27 is directed through the acoustic wave generator 13 to (the sample 7 in) the sample holder 3 and sample light 33 from the sample 7 is transmitted through the objective 21 and through an optional ocular 22 and/or further optics (not shown) to the camera 23. The objective 21 and the camera 23 may be integrated. In an embodiment, two or more optical detection tools, e.g. with different magnifications, may be used simultaneously for detection of sample light 33, e.g. using a beam splitter.
(18) In another embodiment, not shown but discussed in detail in WO 2014/200341, the system comprises a partially reflective reflector and light emitted from the light source is directed via the reflector through the objective and through the sample, and light from the sample is reflected back into the objective, passing through the partially reflective reflector and directed into a camera via optional intervening optics. Further embodiments may be apparent to the reader.
(19) The sample light 33 may comprise light 31 affected by the sample (e.g. scattered and/or absorbed) and/or light emitted by one or more portions of the sample 7 itself e.g. by chromophores attached to the cellular bodies 9.
(20) Some optical elements in the system 1 may be at least one of partly reflective, dichroic (having a wavelength specific reflectivity, e.g. having a high reflectivity for one wavelength and high transmissivity for another wavelength), polarisation selective and otherwise suitable for the shown setup. Further optical elements e.g. lenses, prisms, polarizers, diaphragms, reflectors etc. may be provided, e.g. to configure the system 1 for specific types of microscopy.
(21) The sample holder 3 may be formed by a single piece of material with a channel inside, e.g. glass, injection moulded polymer, etc. (not shown) or by fixing different layers of suitable materials together more or less permanently, e.g. by welding, glass bond, gluing, taping, clamping, etc., such that a holding space 5 is formed in which the fluid sample 7 is contained, at least during the duration of an experiment. As shown in
(22) As shown in
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(26) In each case, the functionalised wall surface portion 17 is provided with one or more primers. The primers may comprise one or more types of interaction moieties.
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(29) In the sample of
(30) In the sample of
(31) Hence, by observing a response of the cellular bodies to the application of a force by an acoustic wave to the sample, binding interactions may become detectable. E.g., this enables distinguishing (properties of) different cellular bodies 9A, 9B. In an embodiment wherein a fluid flow is applied to the sample parallel to the wall 15, detached cellular bodies 9B may be moved, e.g. washed away, whereas cellular bodies 9A remaining adhered to the wall 15 may stay in place. This enables separation of cellular bodies 9A, 9B.
(32) Note that instead of having (had) no particular coating or treatment as in
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(34) Consequently, by observing a response of the cellular bodies 9C, 9D to a variation in the force of the acoustic wave to the sample, strengths of binding interactions may become detectable which enable quantification of target moieties on cellular bodies.
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(36) Also, or in addition to varying the amplitude of the acoustic wave, the frequency of the acoustic wave may be varied, to affect and study interaction moiety—target moiety binding parameters. Results may be obtained in a similar way as indicated in
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(39) It will be clear to the reader that other imaging methods can be used concurrent with acoustic manipulation of cellular bodies.
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(41) Note that complex acoustic force fields with plural nodes may also be generated by plural acoustic wave generators connected with the sample holder to generate acoustic waves in the holding space from perpendicular directions, which generators may be separately controllable and may provide non-stationary force fields, e.g. inducing movement of (groups of) cells in moving acoustic nodes.
(42) In a subsequent step, gentle flushing of the sample space, e.g. by flowing sample fluid through it, removed the unbound cells causing a relative enrichment of the specific T-cell population in the sample space, see
(43) Repeating such protocol (incubation, application of acoustic wave, flushing; optional further incubation, application of acoustic wave, flushing; repeat as desired) at increasing levels of applied acoustic forces allows to screen and collect T-cells based on their tumor cell avidity. This sorting process is illustrated in cartoon-style in
(44) In a therapeutic setting, one or more of the thus isolated T-cell fractions may then be selected for administration to a recipient for treatment, in particular for treatment of the patient from whom the studied target tumor cells were harvested. The same principles of avidity based cell screening and/or selection for therapy and/or research can also be applied to fundamental research in immunology and/or cell biology, to study other forms of avidity based cell applications, and use therein, such as immune therapies which may include immune suppression therapies for patients having received a donor organ.
(45) The disclosure is not restricted to the above described embodiments which can be varied in a number of ways within the scope of the claims as explained supra.
(46) Elements and aspects discussed for or in relation with a particular embodiment of the method or system may be suitably combined with elements and aspects of other embodiments of the system or method, unless explicitly stated otherwise.