MEANS AND METHODS FOR DETECTING SOY ALLERGENS
20210382028 · 2021-12-09
Inventors
- Heide HAVENITH (Köln, DE)
- Holger Spiegel (Aachen, DE)
- Stefan SCHILBERG (Aachen, DE)
- Elke UEBERHAM (Leipzig, DE)
- Jörg LEHMANN (Borsdorf, DE)
Cpc classification
International classification
Abstract
The present invention relates to the field of antibodies and their application in food and feedstuff quality control. In particular, the invention relates to a method for the manufacture of an antibody that specifically binds to soy Gly m 8 protein wherein said method comprises immunising an animal with the purified soy Glym8 protein, wherein said soy Glym8 protein has been obtained by expressing soy Glym8 protein in plants, and preferably, tobacco plants and purifying the soy Glym8 protein from said plants and, preferably, tobacco plants and obtaining an antibody from the animal which specifically bind to soy Gly m8 protein, wherein the animal will be sacrificed. Moreover, the invention contemplates an antibody obtained by said method as well as the use of said antibody for detecting soy material in a food preparation or feedstuff preparation. Further, a method for detecting soy material in a food preparation or feedstuff preparation and a kit for carrying out said method are provided.
Claims
1. A method for the manufacture of an antibody that specifically binds to soy Gly m 8 protein wherein said method comprises: a) immunizing an animal with purified soy Gly m8 protein, wherein said soy Gly m8 protein has been obtained by i) expressing soy Gly m8 protein in plants; and ii) purifying the soy Gly m8 protein from said plants; and b) obtaining an antibody from the animal which specifically binds to soy Gly m8 protein.
2. The method of claim 1, wherein said soy Gly m8 comprises a signal peptide and a pro-peptide of soy Gly m8.
3. The method of claim 1, wherein said soy Gly m8 protein further comprises a purification tag.
4. The method of claim 16, wherein said soy Gly m8 protein is expressed from an expression construct that has been introduced into the tobacco plants and wherein the coding nucleic acid sequence for the soy Gly m8 protein has been codon-optimized for tobacco plants.
5. The method of claim 1, to wherein said purifying comprises at least one step of affinity purification of the soy Gly m8 protein and/or at least one step of size-exclusion purification of the soy Gly m8 protein.
6. The method of claim 1, wherein said obtaining an antibody from the animal comprises generating hybridomas from the animal and selecting and cultivating a hybridoma clone which produces an antibody which specifically binds to soy Gly m8 protein.
7. The method of claim 1, wherein said antibody has a KD of at least 1.57×10.sup.10 for the soy Gly m8 protein.
8. The method of claim 1, wherein said antibody exhibits no cross reactivity for proteins from wheat, celery, mustard, peanut, black beans, mungo beans, white beans, quail beans, lupines, field bean and pea.
9. An antibody which specifically binds to soy Gly m8 protein wherein said antibody has been obtained by the method of claim 1.
10. The antibody of claim 9, wherein said antibody is a monoclonal antibody.
11. (canceled)
12. A method for detecting soy material in a food preparation or feedstuff preparation comprising the steps of: a) contacting a sample of the food preparation or feedstuff preparation with the antibody of claim 9 under conditions and for a time sufficient to allow specific binding of said antibody to soy Gly m8 protein comprised in the soy material; and b) determining the antibody-soy Gly m8 protein complex formed upon specific binding of the antibody to the soy Gly m8 protein in step a); and c) detecting soy material in the food preparation or feedstuff preparation if the presence of the antibody-soy Gly m8 protein complex was determined in step b).
13. The method of claim 12, wherein said determining the antibody-soy Gly m8 protein complex comprises contacting the sample with a further antibody which specifically binds to the antibody which specifically binds to soy Gly m8 protein.
14. The method of claim 13, wherein said further antibody has been linked to a detectable label or tag.
15. A kit for carrying out a method for detecting soy material in a food preparation or feedstuff preparation, comprising the antibody of claim 9 and means for determining the presence or absence of antibody-soy Gly m8 protein complex.
16. The method of claim 1, wherein the soy Gly m8 protein is expressed in tobacco plants.
17. The method of claim 13, wherein said further antibody specifically binds to the antibody which specifically binds to soy Gly m8 protein when said antibody which specifically binds to soy Gly m8 protein is present in said complex.
Description
FIGURES
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EXAMPLES
Example 1: Production of Recombinant Soy Gly m 8 Protein in Tobacco Plants
[0082] Recombinant Gly m 8, which represents a soy storage molecule with a complex maturation cycle, was successfully produced in N. benthamiana by Agrobacterium-mediated transient expression. The native Gly m 8 sequence including the N-terminal signal peptide and pre-propeptide and a C-terminal His6 sequence was codon-optimised for expression in N. benthamiana and cloned into an expression cassette in the context of a binary plant expression vector (
[0083] Plant Expression Construct
[0084] A synthetic gene coding for the precursor of Gly m 8 of Glycine max (UniProt ID: P19594) amino acids M1 to D158 including the signal peptide, the pro-peptide, and an additional his6-tag sequence at the 3′-terminus, was codon optimized for Nicotiana benthamiana from Geneart (Invitrogen, Carlsbad, Calif.). The synthetic gene was introduced through the NcoI/BamHI sites of the binary plant expression vector pTRAkt-ER (Sack et al. 2007, FASEB Journal 21(8): 1655-1664). The final construct pTRAkt_Gly m 8 was verified by sequencing.
[0085] Transient Gly m 8 Expression in Plants
[0086] The pTRAkt_Gly m 8 vector was propagated in E. coli DH5□ cells (NEB, Frankfurt/Main, Germany), purified, introduced into electrocompetent Agrobacterium tumefaciens cells and used for transient expression in N. benthamiana plants as previously described (Feller et al. 2013PloS one 8(11), e79920).
[0087] Purification of Plant-Produced Gly m 8
[0088] Extraction and immobilised metal affinity chromatography (IMAC) purification of plant-derived Gly m 8 was performed as previously described using standard procedures (Feller et al., 2013, loc. cit.). Afterwards, the Gly m 8 was further purified by size exclusion chromatography (SEC) using a Superdex75 16/60 (GE Healthcare, Freiburg, Germany). Integrity and purity of the recombinant Gly m 8 was verified by SDS-PAGE and LC/MS-MS analysis).
Example 2: Generation and Characteristics of Monoclonal Antibodies Against Soy Gly m 8 Protein
[0089] Immunisation of mice with recombinant Gly m 8 protein revealed antibodies which display high-affinity binding to both recombinant and native protein. The latter was captured as whole aqueous soy extract in indirect ELISA (
[0090] Generation of Monoclonal Antibodies
[0091] Mouse anti-Gly m 8 mAbs were generated by immunising female BALB/c mice (Janvier Labs, Le Genest-Saint-Isl, France) with plant-produced and IMAC/SEC-purified recombinant Gly m 8 protein. The immunisation experiments were approved by the State Animal Care and Use Committee (Landesdirektion Sachsen, Leipzig, Germany, V 07/14) and were carried out in accordance with the European Communities Council Directive (86/609/EEC) for the Care and Use of Laboratory Animals. The mouse with the highest Gly m 8-specific antibody titer was used as donor of spleenocytes, which were fused to X63.Ag8.653 myeloma cells (ACC 43, DSMZ, Braunschweig, Germany). Hybridoma supernatants were screened by indirect ELISA on flat-bottom high protein-binding capacity 96-well ELISA plates (Nunc MaxiSorp™, Thermo Fisher Scientific Life Technologies, Darmstadt, Germany) coated with either recombinant protein (2 μg/ml) or whole soy extract (10 μg/ml). Cross-reactivity of generated IgG antibodies to other legumes (lupine, pea nut and pea) was identified by ELISA using total protein extracts (total protein concentration=10 μg/ml) from the corresponding plant seeds.
[0092] Surface Plasmon Resonance (SPR) Spectroscopy
[0093] Ten IgG-positive clones were selected for SPR analysis on covalently coupled purified recombinant Gly m 8 protein using a Biacore T200 SPR biosensor instrument (GE Healthcare, Freiburg, Germany) previously described based on an Fc-specific antibody capture system.
[0094] Calibration Free Concentration Analysis (CFCA)
[0095] CFCA, a method described elsewhere, was performed to determine the active concentration of recombinantly produced and purified Gly m 8 using a Biacore T200 instrument (GE Healthcare) and a CM5-S-Series sensor chip with recombinant Protein A prepared as described previously (Boes et al., 2011). These measurements were performed at 25° C. using HBS-EP (10 mM (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), 150 mM NaCl, 3 mM EDTA, 0.005% (w/v) polysorbat-20) as running buffer. A 1-min pulse with 30 mM HCl regenerated surfaces.
[0096] To ensure a sufficiently fast initial binding rate, 2500 response units (RU) of the Gly m 8 specific murine mAb3 were captured in each assay step. Purified recombinant Gly m 8 was used at three different dilutions (1/3000, 1/4500 and 1/6000) to ensure an initial binding rate (IBR) between 0.5 and 5 RU/s at a flow rate of 5 μl/min. IBR was measured at 5 and 100 μl/min using double referencing. Antigen-specific antibody concentration was determined using the CFCA module of the Biacore T200 Evaluation Software (GE Healthcare). A molecular weight of 16,000 kDa and a diffusion coefficient of 9.16×10-11 m2/s were used in the binding model.
[0097] Kinetic Analysis
[0098] Kinetic analysis of the Gly m 8-specific mouse anti-Gly m 8-3 (mAb3) and mouse anti-Gly m 8-8 (mAb8) were carried out using the Biacore T200 instrument. Therefore, ca. 500 RU of mAb8 were captured onto an anti-mouse-coated CM5 chip prepared with a mouse antibody capture kit (GE Healthcare). Mab3 were captured on a Protein A surface prepared as described elsewhere. To determine the kinetic binding constants purified recombinant Gly m 8 was injected at a flow rate of 30 μl/min for 150 s (mAb8) or 180 s (mAb3), respectively. Then, dissociation followed for 900 s (mAb8) or 400 s (mAb3), respectively. Gly m 8 was used at the following CFCA-based concentrations (5 nM, 2.5 nM, 1.25 nM, 0.625 nM, 0.3125 nM, or 0.15625 nM). Between measurements the surface was regenerated by pulsing for 1 min with 10 mM glycine/HCl. Buffer injections were used for double referencing. Binding curves were evaluated using Biacore T200 Evaluation Software (GE Healthcare) applying a 1:1 binding model.
[0099] Sandwich Assay
[0100] To confirm simultaneous binding of mAb3 and mAb8 a sandwich assay was performed. Anti-Gly m 8 mAb3 was captured on a Protein A-functionalised surface and saturated with recombinant Gly m 8. Afterwards mAb8 was injected to illustrate the binding of mAb8 to Gly m 8 captured by mAb3.
Example 3: ELISA for Soy Material Detection
[0101] Features of the developed Gly m 8 sandwich ELISA are lower limit of detection (LOD>10 pg/ml determined by the average values of 10 matrix-blanks plus three standard deviations) and LOQ=65 pg/ml, determined as lowest concentration of spiked Gly m 8 in three different matrices or buffer as well that is still reliably detectable. We determined the inter-assay variance (robustness) by analysing the same samples on three different days by two different operators (
[0102] Quantification of Gly m 8 was performed by sandwich ELISA using two out of the 10 pre-selected antibodies. Capture antibodies were immobilised onto 96-well plates (Nunc MaxiSorp™, Thermo Fisher Scientific Life Technologies) in 0.5 M carbonate buffer at 4° C. overnight. Plates were washed three times with phosphate-buffered saline 154 mM NaCl, 0.05% Tween (PBS-T) and blocked with Superblock™ blocking reagent (Thermo Fisher Scientific Life Technologies). Afterwards, a one-hour incubation at ambient temperature with liquid plate sealer (Candor BioScience, Wangen, Germany) followed and plates were air-dried and shrink-wrapped and stored at ambient temperature.
[0103] Extracted samples were incubated for 10 min at ambient temperature (RT) in duplicate. After a further washing step (3×PBS-T), horseradish peroxidase (POD)-conjugated detection antibody was incubated for 10 min at RT. POD activity as an indicator for bound sample was determined following a third washing step (3×PBS-T) by incubating the plate with TMB-E substrate (3,3′,5,5′-tetramethybenzidine) (DUNN Labortechnik, Asbach, Germany). A yellow colour results after acidification using 0.5 M sulphuric acid. Colour intensity represents a signal for bound detection antibodies and was measured at 450 nm. Signal intensities were calculated by extrapolation to a calibration curve from purified recombinant protein consisting of eight known concentrations. ELISA was validated according to AOAC guidelines, Appendix M, referenced to Abbott et al (Abbott et al. 2010 Journal of AOAC International 93 (2), S. 442-450) and DIN 15011843-5.
[0104] Limit of Detection and Recovery
[0105] Limit of detection was determined measuring eight different concentrations of purified recombinant Gly m 8 in extraction buffer. Recovery was calculated by spiking five different concentrations of recombinant Gly m 8 into three different matrices relevant for processed soy, almond-wheat-muffin, rice cookie and minced boiled sausage. Lower limit of detection (LOD) and Lower Limit of Quantification (LOQ) were calculated by checking sensitivity and specificity using the methodology in the linear and non-linear calibration cases (ISO 11843-5:2008).
[0106] Precision and Robustness of the Test
[0107] The ability of the anti-Gly m 8 sandwich ELISA to resist changes in results due to minor deviations in experimental procedure were tested by deviations in time (two times+10% of recommended time of 10 min), volume (two volumes+10% of set volume 100 μl) and temperature (ambient temperature, 20° C., 28° C., and 37° C.), respectively. Furthermore, two different individuals performed the test on three different days.
[0108] Specificity and Selectivity
[0109] Specificity of the antibodies as the ability to bind the antigen in presence of components which may be present was tested by using recombinant Gly m 4 and recombinant Gly m TI and Gly m 6 and Gly m 5 (Sigma Aldrich, Deisenhofen, Germany). Selectivity of the antibodies as the extent to which they can bind the antigen in complex mixtures interference was tested using three different matrices.
[0110] Sample Extraction
[0111] Samples, listed in Table 1 (3.3 mg/ml) were extracted by homogenizing and mixing 30 min in PBS (300 mM NaCl) at ambient temperature. Samples listed in Table 1 were used.
[0112] Purification of Native Gly m 8 Antigen by Immunoprecipitation
[0113] Extracts of hexane defatted soy flakes (prepared as previously described by Meinlschmidt et al. 2016, Food science & nutrition 4 (1), S. 11-23) were pre-incubated with 0.5 ml protein G sepharose 4 Fast Flow (90-μm particle size, GE Healthcare) 1 h at room temperature. Afterwards, protein G sepharose was removed by filtration through a disposable polypropylene device with polyethylene filter (30 μm, Thermo Fisher Scientific Life Technologies). Pre-adsorbed protein extract was incubated with anti-Gly m 8 mAb3 antibody (ELISA capture antibody) for 1 h at room temperature on a tube rotator (Stuart Tube Rotator SB3, Cole-Parmer, Wertheim, Germany). After this incubation, 1 ml of protein G sepharose 4 Fast Flow (90-μm particle size, GE Healthcare) was added and mixed by rotating was continued 1 h at room temperature. The mixture was filtered through a disposable polypropylene device with polyethylene filter (30 μm, Thermo Fisher Scientific Life Technologies) forming a column matrix by gravity flow. This protein G sepharose—column was washed ten times with 10 ml PBS each and eluted with 0.5 ml glycin-HCl (0.1 M, pH 3.6). The column eluate was neutralised with 50 μl Tris (1 M, pH 9.0) and analysed by polyacrylamide gel electrophoresis (PAGE).
[0114] Proteins were separated in 16% (w/v) tricine gels and protein bands were analysed by LC-MS/MS analysis as described previously (Meinlschmidt et al. 2017, Innovative Food Science & Emerging Technologies 40, S. 58-67.).
[0115] Discussion
[0116] The main challenge for detecting allergens in food by ELISA is the reliable protein isolation during sample preparation from complex food matrices. Limited solubility, mainly of globulins in legume extracts, significantly influences the reliability of results as previously shown for the two main storage proteins Gly m 5 and Gly m 6 in soy. Therefore, for allergen tests targeting soluble proteins such as albumins, which remain stable against different proteases and heat exposition and maintain the solubility of the untreated native protein due to their unique three-dimensional structure is desirable. In addition, albumins exhibit less cross-reactivity between different legumes species whereas 115 globulins, which are often used as antigens in ELISA, do due to their high sequence homology finally leading to considerable constraints in ELISA detection which was already reported by other authors using a Gly m 6 ELISA derived from R-Biopharm (Darmstadt, Germany) (Lacorn et al. 2016, loc. cit.). According to the dendrogram of sequence homology among the 2S albumins only the 2S albumins of lupine (i.e. delta conGlytin) and peanut (i.e. Ara h6) are considered to be cross-reactive to Gly m 8. However, no cross-reactivity of Gly m 8-specific mAb3 and mAb8 to these legumes was determined. The other main storage protein Gly m 5 (7S globulin) displays less sequence homologies to equivalents in other legumes. However, the detection of Gly m 5 requires labour-intensive heat extraction for maximal recovery which represents a disadvantage of this approach (Pavlicevic et al. 2013, Hem Ind 67 (4), S. 687-694).
[0117] A key advantage of the Gly m 8 sandwich ELISA presented herein is the high affinity of the applied antibodies, which allow binding of the Gly m 8 antigen at very low concentrations and the particular high charcterization level of the antibodies by SPR analysis. The typical binding and stability characteristics of mAbs in SPR experiments enables a stringent quality control of produced antibody charges. Vice versa a systematic quality control of the recombinant Gly m 8 calibrator with antibodies of the same fusion, but not used in ELISA, is possible.
[0118] The utilization of Gly m 8 as marker antigen for detection and quantification of soy allergen in food exhibits a second important advantage. It has been shown being the most important predictor for severity of allergic reactions in children so far (Ebisawa et al. 2013, loc. cit.). However, in case of Gly m 8 a discrepancy in the assessment of its allergenicity in different studies exists, while only Ebisawa and colleagues used native Gly m 8 which was coupled to an immunocap device. Both other studies used either recombinant protein produced in E. coli (Lin et al. 2006, International archives of allergy and immunology 141 (2), S. 91-102) or microarrays with overlapping peptides representing solely linear epitopes being incapable of reflecting the three-dimensional structure of the protein.
[0119] Finally, the Gly m 8 ELISA is also advantageous to obtain information on the allergenic potential of processed soy proteins regarding this allergenic ingredient. In general the performance of a commercial ELISA in food analyses is evaluated as reliable if recovery rates in processed food are in the range between 50 and 150% (Abbott et al. 2010). Therefore, the newly presented Gly m 8 ELISA would be most suitable in applications intending detection of soy ingredients in chocolate or most texturized vegetable protein (TVP) detection besides native soy protein (Tab. 4). Keeping in mind that only 1.1 mg in 1 g soy protein are Gly m 8 compared to 300 to 600 mg Gly m 5 or Gly m 6 in 1 g soy, respectively, the sensitivity of the new Gly m 8 ELISA is amazingly high.
[0120] The test described herein was able to detect minimal soy amounts in both rice cookie and minced boiled sausages which were otherwise not detectable in native extractions using other test systems such as different Gly m TI ELISAs despite Gly m TI represents 60 mg of 1 g soy protein.
[0121] In summary, the Gly m 8 ELISA introduced in this study combines the advantages of monoclonal antibodies, which are nearly unlimited available, and a rugged highly purified recombinant standard, that could be utilized as reference material in uniform and stable quality.
TABLE-US-00001 TABLE 1 Soy-containing foods and food-ingredients. Commercial soy products, samples of previous proficiency tests and in-house soy processed food were used as samples Sample Manufacturer/provider Soy flake In-house flakes prepared at Fraunhofer IVV from untoasted soybeans (Glycine max (L.) Merr.) from Naturkost Ernst Weber (Munich, Germany) Soy protein isolate Wilcon G100, Wilmar, Singapore Texturized vegetable different manufacturers, for example protein GutBio, (France) 43-49% protein TOFU different manufacturers, for example Alnatura (Bickenbach, Germany) and Tofu Life (Hillersheim, Germany), 12.5-16.7% protein Minced boiled sausage LVU Durchführung von Labor- vergleichsuntersuchungen (Herbolzheim, Germany) Rice cookies LVU Durchführung von Labor- vergleichsuntersuchungen (Herbolzheim, Germany) Roasted soy bean Seeberger (Ulm, Germany) Model chocolate containing Ifp Institut für Produktsicherheit, Berlin, 1% (w/v) soy Germany, in-house production Model cookie containing Ifp Institut für Produktsicherheit, Berlin, 1% (w/v) soy Germany, in-house production Soy milk Alpro soya light 2.1% (v/v) protein (Wevelgem, Belgium,)
TABLE-US-00002 TABLE 2 Kinetic parameters derived from SPR-based interaction analysis Kinetic parameters ka, kd, and KD were derived by analysis of binding curves at 6 concentrations of recombinant Gly m 8. Exemplary sensogramme shown in FIG. 4. k.sub.a SE(k.sub.a) k.sub.d SE(k.sub.di) KD Sample [M.sup.−1 s.sup.−1] [M.sup.−1 s.sup.−1] [s.sup.−1] [s.sup.−1] [M] mAb8 3.76 × 10.sup.7 1.6 × 10.sup.5 5.89 × 10.sup.−3 2.5 × 10.sup.−5 1.57 × 10.sup.−10 mAb3 1.74 × 10.sup.7 1.1 × 10.sup.5 6.7 × 10.sup.−3 2.5 × 10.sup.−5 3.92 × 10.sup.−10
TABLE-US-00003 TABLE 3 Recovery of recombinant Gly m 8 at five different concentration levels in three different matrices. Matrices produced by extraction of indicated processed food were spiked with recombinant Gly m 8 protein and the recovery rates in percent of the spiked amount were measured by Gly m 8 sandwich ELISA. Recovery in Spiked Recovery in minced boiled Recovery in Recovery in Gly m 8 almond muffin sausage rice cookie- extraction [pg/ml] matrix [%] matrix [%] matrix [%] buffer [%] 5000 104 +/− 4.5 108 +/− 4.6 110 +/− 12.2 101 +/− 5.9 2500 101 +/− 4.6 104 +/− 6.7 109 +/− 11.9 109 +/− 15.0 500 99 +/− 7.8 108 +/− 5.9 106 +/− 13.4 109 +/− 15.1 100 95 +/− 14.7 99 +/− 9.0 98 +/− 18.4 103 +/− 16.1 65 97 +/− 10.3 105 +/− 10.9 99 +/− 20.4 107 +/− 23.2
TABLE-US-00004 TABLE 4 Amount of Gly m 8 measured in processed food as indicated. Measured concentrations of Gly m 8 in ELISA using a four-parameter logistic analysis are given in pg/ml. Additional maximal level of dilution and amounts in pg in 300 mg sample are shown. Recovery rates were calculated illustrative, provided that 1 g soy protein contains 1 mg Gly m 8 and referred to protein content according to manufacturer's specification. Mean amount Recovery in Measured Maximal [pg] in 300 Protein relation to Food/Food concentration dilution mg original content total soy ingredient [pg/ml] factor sample weight [%] protein Soy flake 5,803 512,000 580 × 10.sup.6 45 429 Soy protein 34,426 5,120,000 342 × 10.sup.6 16.7 380 isolate Texturized 1,307 128,000 130 × 10.sup.6 43 100 vegetable protein TOFU 159 16,000− 9.3 × 10.sup.6 13.3 23.3 Minced boiled (11, <LQL) 5 sausage Rice cookies 126 5 632 0.002 23.5 Roasted soy 5,358 2,000 9.954 × 10.sup.6 45 7.3 bean Model 829 2,000 1.59 × 10.sup.6 1 100 chocolate containing 1% soy Model cookie 425 500 2.5 × 10.sup.6 1 177 containing 1% soy Soy milk 405 156,250