PRODUCTION OF SALIPRO PARTICLES
20220192982 · 2022-06-23
Assignee
Inventors
Cpc classification
A61K9/1275
HUMAN NECESSITIES
A61K47/42
HUMAN NECESSITIES
A61K9/1274
HUMAN NECESSITIES
International classification
A61K9/127
HUMAN NECESSITIES
Abstract
The invention relates to a process for preparing saposin lipoprotein particles, comprising a saposin-like protein, lipids and optionally a hydrophobic agent wherein the saposin-like protein or the hydrophobic agent is selectively bound to a support to allow the self-assembly of the saposin lipoprotein particles. The process of the invention comprises the step of a.) providing the hydrophobic agent and lipids, b. 1)/b.2 contacting the hydrophobic agent or the saposin-like protein with a support that is capable of selectively binding either of the two molecules to the support, c.1)/c.2) contacting the support-bound particle components with the remaining particle components, either the saposin-like protein or the hydrophobic agent, to allow for the self-assembly of the saposin lipoprotein particle on the support and d.) optionally eluting the support-bound saposin lipoprotein particles.
Claims
1. Process for producing a saposin lipoprotein particle, wherein the produced saposin lipoprotein particle comprises a saposin-like protein, lipids, and optionally, a hydrophobic agent, wherein the hydrophobic agent is different from the lipids and (I) wherein the process comprises the following steps: a) providing the lipids, and optionally the hydrophobic agent; b.1) contacting the saposin-like protein with a support that is capable of selectively binding the saposin-like protein to the support in a liquid environment; c.1) contacting the support-bound saposin-like protein with the lipids and, optionally, the hydrophobic agent, to allow for the self-assembly of the saposin lipoprotein particle on the support; d) optionally eluting the support-bound saposin lipoprotein particle; or (II) wherein alternatively the process comprises the following steps: a) providing the hydrophobic agent and the lipids; b.2) contacting the hydrophobic agent with a support that is capable of selectively binding the hydrophobic agent to the support; c.2) contacting the support-bound hydrophobic agent with the saposin-like protein to allow for the self-assembly of the saposin lipoprotein particle on the support; d) optionally eluting the support-bound saposin lipoprotein particle.
2. Process according to claim 1, alternative (I), wherein the support comprises a capture moiety, and the saposin-like protein comprises a binding moiety, wherein the capture moiety is capable of selectively binding the binding moiety in the saposin-like protein.
3. Process according to claim 1, alternative (II), wherein the support comprises a capture moiety, and the hydrophobic agent comprises a binding moiety, wherein the capture moiety is capable of selectively binding the binding moiety in the hydrophobic agent.
4. Process according to any one of the preceding claims, wherein the support is in the form of i. beads, ii. a bed, iii. a membrane, and/or iv. a solid support, in particular a solid support with a planar surface.
5. Process according to any one of the preceding claims, wherein the lipids are selected from, the group consisting of viral, archaeal, eukaryotic and prokaryotic lipids, and mixtures thereof.
6. Process according to any one of the preceding claims, wherein in step a) the hydrophobic agent and the lipids are provided in form of a viral, archaeal, eukaryotic or prokaryotic membrane, which comprises the hydrophobic agent and the lipids that are to be incorporated into the saposin lipoprotein particles.
7. Process according to claim 6 in so far as it relates to claim 1, alternative (I), wherein in step c.1) the support-bound saposin-like protein is contacted with the viral, archaeal, eukaryotic or prokaryotic membrane provided in step a) to allow formation of a library of saposin like particles wherein the library comprises a heterogenic mixture of saposin lipoprotein particles with different membrane lipid and optionally membrane protein compositions.
8. Process according to any one of the preceding claims, wherein the saposin-like protein is saposin A, saposin B, saposin C, saposin D or a derivative or truncated form thereof, which is capable of forming saposin lipoprotein particles in the process of claim 1.
9. Process according to claim 8, wherein the derivative or truncated form is selected from i. a protein having at least 20% sequence identity to the full length sequence of SEQ ID NO. 1, 2, 3, 4, 5 or 6; in particular wherein said protein is amphipathic, forms at least one alpha helix, and is capable of self-assembling together with lipids into lipoprotein particles when employed in the process of claim 1; and ii. a protein comprising the sequence of SEQ ID NO. 1, 2, 3, 4, 5 or 6 in which 1 to 40 amino acids have been deleted, added, inserted and/or substituted.
10. Process according to any one of the preceding claims, wherein the hydrophobic agent is selected from the group consisting of a hydrophobic organic compound and a hydrophobic biomolecule.
11. Process according to claim 10, wherein the hydrophobic organic compound and/or the hydrophobic biomolecule is selected from the group consisting of a biologically active agent, a drug, an active ingredient of a drug, an active ingredient of a cosmetic product, an active ingredient of a plant protective product, a dietary and/or nutritional supplement, a diagnostic probe, a contrast agent, a label and an indicator.
12. Process according to any one of claim 10 or 11, wherein the hydrophobic biomolecule is a protein comprising a hydrophobic moiety, in particular a protein selected from the group consisting of a membrane protein, an integral transmembrane protein, an integral monotopic membrane protein, a peripheral membrane protein, an amphitropic protein in a lipid-bound state, a lipid-anchored protein and a chimeric protein with a fused hydrophobic and/or transmembrane domain.
13. Process according to any one of the preceding claims, wherein the hydrophobic agent, the lipids and/or the saposin-like protein is in a detergent-solubilized state and wherein optionally the detergent is selected from the group consisting of alkylbenzenesulfonates or bile acids, cationic detergents and non-ionic or zwitterionic detergents such as lauryl-dimethyl amine-oxides (LDAO), Fos-Cholines, CHAPS/CHAPSO, saponins such as Digitonin and structurally related synthetic detergents such as glycol-diosgenin, alkyl glycosides such as short, medium or longer chain alkyl maltosides, in particular n-Dodecyl β-D-maltoside, glucosides, maltose-neopentyl glycol (MNG) amphiphiles, amphiphilic polymers (amphipols), styrene maleic acid co-polymer (SMA), macrocycle or cyclic oligomers based on a hydroxyalkylation product of a phenol and an aldehyde (Calixarene), and mixtures thereof.
14. Process according to any one of the preceding claims, wherein i. the particles obtained in step c.2) and/or c.1) are disc-shaped, in particular wherein they are disc-shaped and do not comprise a hydrophilic or aqueous core; ii. the particles of step c.2) and/or c.1) have an average maximum diameter of from 2 nm to 200 nm, in particular from 3 nm to 150, preferably from 3 nm to 100 nm; iii. the self-assembly of the particle in step c.2) and/or c.1) is carried out at a pH from 2.0 to 10.0, in particular 6.0 to 10.0, preferably from 6.0 to 9.0, particularly preferred from 7.0 to 9.0, and most preferred from 7.0 to 8.0.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0273] The invention will hereinafter be described with reference to the Figures, which depict certain embodiments of the invention. The invention, however, is as defined in the claims and generally described herein. It should not be limited to the embodiments shown for illustrative purposes in the Figures below.
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[0287]
[0288] The sequences are provided as SEQ ID Nos 7-46 as indicated in table 1 above.
[0289] FIG. 1 depicts a prior art Apolipoprotein A-1 containing nanosdisc particle (10) (see, EP 1 596 828 B1 discussed above) comprising lipids (3) and Apolipoprotein A-1 as lipid binding polypeptide (11). Contrary to the apolipoprotein-derived nanodiscs of the prior art, the lipid binding polypeptide of the present invention, i.e. the saposin-like protein, does not enclose the lipids in a double belt-like fashion (cf.
[0290]
[0291] The particles of
[0292]
[0293] The particle depicted in
[0294]
[0295]
[0296]
[0297]
[0298]
[0299]
[0300]
[0301]
[0302] Contacting crude membrane vesicles (exemplified as vesicles (7,7′) in
[0303] Of course, the number of hydrophobic compounds incorporated into a single particle can be tuned by adjusting the molar ratio of hydrophobic compounds to lipids employed in the self-assembly reaction of step c.1). The hydrophobic compound of
EXAMPLES
[0304] The following example serves to further explain the invention in more detail, specifically with reference to certain embodiments and Figures which, however, are not intended to limit the present disclosure.
I Abbreviations
[0305] The following abbreviations will be used:
[0306] Asp Aspartic acid
[0307] CV column volume
[0308] daGFP This kind of green fluorescent protein can be used in the same way as normal
[0309] GFP using argon laser based or UV based excitation apparatus to allow the detection of fluorescence. The protein has a peak excitation of 510 nm and a peak emission of 521nm.
[0310] EB1 elution buffer (20 mM HEPES pH 7.5, 150 mM NaCl, 400 mM Imidazol)
[0311] EB2 elution buffer (50mM HEPES pH 7.5, 2% DDM, 0.4% CHS, 200mM NaCl, 1mM L-Asp, 1mM EDTA, 1mM TCEP and 5% Glycerol, 2.5mM desthiobiotin)
[0312] EB3 50 mM HEPES pH 7.5, 200 mM NaCl, 10% glycerol, 250 ug/mL FLAG-peptide
[0313] EB4 50 mM HEPES pH 7.5, 200 mM.NaCl, 10% glycerol supplemented with 2mM biotin
[0314] EDTA ethylenediaminetetraacetic acid
[0315] DDM n-dodecyl-β-D-maltopyranoside
[0316] GF gel filtration buffer (20 mM HEPES pH 7.5, 150 mM NaCl)
[0317] HEPES 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid
[0318] His Histidine
[0319] HNG buffer 50mM HEPES pH 7.5, 200mM NaCl and 5% glycerol
[0320] HNG buffer II 50mM HEPES pH 7.5, 200mM NaCl and 10% glycerol
[0321] IMAC immobilized metal affinity chromatography
[0322] IPTG isopropyl β-D-1-thiogalactopyranoside
[0323] LB1 20 mM HEPES pH 7.5, 150 mM NaCl, 20 mM Imidazol
[0324] LB2 50 mM HEPES/Tris-base, pH 7.4, 50 mM NaCl buffer supplemented with 1 mM L-Asp, 1 mM EDTA, 1 mM PMSF, 1 mM TCEP, and 1:200 (v/v) dilution of mammalian protease inhibitor cocktail (Sigma)
[0325] PEI poly-ethylenimine
[0326] PMSF phenylmethylsulfonyl fluoride
[0327] SB solubilization buffer
[0328] SEC size-exclusion chromatography
[0329] SLC solute carrier
[0330] TCEP tris(2-carboxyethyl)phosphine
[0331] TEV Tobacco etch virus
[0332] Tris tris(hydroxymethyl)aminomethane
[0333] TB medium terrific broth medium
[0334] WB working buffer (50mM HEPES pH 7.5, 2% DDM, 0.4% CHS, 200mM NaCl, 1mM L-Asp, 1mM EDTA, 1mM TCEP and 5% Glycerol)
II Purification of saposin A
[0335] Purified saposin A used in the below experiments was prepared as follows. Saposin A protein expression was carried out using a vector with the coding region for human saposin A (SEQ ID NO: 1) inserted into a pNIC-Bsa4 plasmid and transformed and expressed in E. coli Rosetta gami-2 (DE3) (Novagen) strains. Cells were grown at 37°0 C. in TB medium supplemented with Tetracycline, Chloramphenicol and Kanamycin and induced with 0.7 mM IPTG. Three hours after induction, the cells were collected by centrifugation at 12.000×g for 15 min. The supernatant was discarded, the cell pellet was resuspended using lysis buffer LB1 (20 mM HEPES pH 7.5, 150 mM NaCl, 20 mM Imidazol) and disrupted by sonication. Lysates were subjected to centrifugation at 26.000×g for 30 min, the supernatant heated to 85°0 C. for 10 min, followed by an additional centrifugation step at 26.000×g for 30 min. Preparative IMAC purification was performed by batch-adsorption of the supernatant by end-over-end rotation with Ni Sepharose™ 6 Fast Flow medium for 60 min. After binding of saposin A to the IMAC resin, the chromatography medium was packed in a 10-mm-(i.d.) open gravity flow column and unbound proteins were removed by washing with 15 bed volumes of lysis buffer LB1. The resin was washed with 15 bed volumes of wash buffer (20 mM HEPES pH 7.5, 150 mM NaC1, 40 mM Imidazol). Saposin A was eluted by addition of five bed volumes of elution buffer EB1 (20 mM HEPES pH 7.5, 150 mM NaCl, 400 mM Imidazol). The eluate was dialyzed overnight against gel filtration buffer GF pH 7.5 (20 mM HEPES pH 7.5, 150 mM NaCl) supplemented with recombinant TEV protease. TEV protease containing an un-cleavable His-tag was removed from the eluate by passing it over 2 ml IMAC resin. Cleaved target proteins were concentrated to a volume of 5 ml using centrifugal filter units and loaded onto a HiLoad Superdex™ 200 16/60 GL column using an AKTAexplorer™ 10 chromatography system (both GE Healthcare). Peak fractions were pooled and concentrated to 1.2 mg/ml protein. The protein sample was flash frozen in liquid nitrogen and stored at −80 C.
III Generation of Salipro Particles on Support
Example 1
[0336] In this example, a large transmembrane transporter (SLC) is used as hydrophobic agent in alternative (II) of the process according to the invention. The lipids and the hydrophobic agent are provided in the form of a crude membrane fraction obtained from SLC-overexpressing HEK293F cells. The SLC transporter contains a Strep II-tag as binding moiety. Anti-Strep-II affinity purification beads, were used as support according to the invention. They contain anti-Strep-II capture moieties that are capable of binding the Strep II-binding moiety comprised in the SLC transporter protein. Addition of Saposin A to the support-bound SLC transporter-containing solubilized membranes allowed formation of SLC-transporter-containing saposin lipid particles that were still attached to the support via the Strep-II tag comprised in the SLC transporter protein. Thus, the assembly of the saposin lipid particles took place entirely on the support and with the endogenous lipids that were derived from the cellular membrane and still complexed with the support-bound SLC transporter protein.
[0337] 1.a. Over-Expression of Membrane Protein
[0338] The coding sequence of human SLC transporter was introduced into an expression vector encoding for an N-terminal Strep-tag II followed by daGFP and a PreScission protease cleavage site. Prior to transfection, HEK293F cells (ATCC cell line, myco-plasma test negative) were grown in Exce11293 medium (Sigma) supplemented with 4 mM L-glutamine (Sigma) and 5μg m1.sup.-1 Phenol red (Sigma-Aldrich) to densities of 2.5×10.sup.6 cells ml.sup.−1. Cells were transiently transfected with the expression vector in Freestyle293 medium (Invitrogen) using poly-ethylenimine (PEI) (Polysciences) at a density of 2.5×10.sup.6 cells m1.sup.-1, diluted with an equivalent volume of Exce11293 6 h after transfection, and treated with 2.2 mM valproic acid (Sigma) 12 h after dilution of the cultures. Transfected cells then overexpressed the fusion protein Strep II-daGFP-SLC. All cells were collected at around 48 h after transfection.
[0339] 1.b. Preparation of Crude Cell Membranes
[0340] Large-scale expression of the fusion protein Strep II-daGFP-SLC was performed in a 51 culture essentially as described in a. above. Cells were collected in lysis buffer (LB2) containing 50 mM HEPES/Tris-base, pH 7.4, 50 mM NaCl supplemented with 1 mM L-Asp, 1 mM EDTA, 1 mM PMSF, 1 mM TCEP, and 1:200 (v/v) dilution of mammalian protease inhibitor cocktail (Sigma), and disrupted in a cell homogenizer (EmulsiFlex-05, Avestin) via 3 runs at approximately 103,000 kPa. The resulting homogenate was clarified by centrifugation (4,500 g for 0.5 h) and the crude membranes were collected by ultracentrifugation (186,000 g for L5 h). Membranes were washed once with the LB2 buffer and finally homogenized with a douncer in a buffer containing 50 mM HEPES/Tris-base, pH 7.4, 200 mM NaCl, 1 mM L-Asp, 1 mM EDTA, 1 mM TCEP, and 10% glycerol, snap-frozen in liquid N.sub.2 and stored at −80°0 C. at 0.5 g membranes ml.sup.−1.
[0341] 1.c. Binding to Affinity Support and Elution
[0342] The following buffers were used: [0343] Solubilization buffer (SB): 50 mM HEPES pH 7.5, 2% DDM, 0.4% CHS, 200 mM NaCl, 1 mM L-Asp, 1 mM EDTA, 1 mM TCEP and 5% Glycerol. [0344] Working buffer (WB): 50 mM HEPES pH 7.5, 200 mM NaCl, 1 mM L-Asp, 1 mM TCEP and 5% glycerol. [0345] Elution buffer EB2: WB supplemented with 2.5 mM desthiobiotin (dBiotin). [0346] HNG buffer: 50 mM HEPES pH 7.5, 200 mM NaCl and 5% glycerol.
[0347] 800 μl crude membranes (0.5 g membranes m1.sup.-1) containing over-expressed SLC transporter were solubilized with 4.2 ml SB and incubated for 90 min at 4°0 C. using a rotating wheel. Membrane debris was removed by centrifugation at 30000 g for 30 min followed by the addition of 900 μl equilibrated anti-Strep-II affinity purification beads (StrepTactin Sepharose beads, GE healthcare) and the total volume was corrected to 5 ml using WB. The sample was then incubated at 4°0 C. for 1 h to allow binding of the Strep-II tagged SLC transporter to the affinity beads. The sample was then divided onto 5 separate columns allowing to remove non-bound material by gravity flow through. The affinity beads were not washed at this stage and contained the affinity bound SCL transporter in an environment (“dead volume” of the beads) partly containing native cell membrane lipids, detergent micelles and the WB components.
[0348] Different amounts (0-4 ml) of 3.6 mg/ml Saposin were added to the corresponding columns. The mixtures were then transferred to five new tubes and the total sample volumes were corrected to 5 ml using WB as follows: [0349] Sample 1: 0 ml Saposin A +4 ml WB [0350] Sample 2: 0.5 ml Saposin A +3.5 ml WB [0351] Sample 3: 1 ml Saposin A +3 ml WB [0352] Sample 4: 2 ml Saposin A +2 ml WB [0353] Sample 5: 4 ml Saposin A
[0354] Samples 1-5 were then incubated for 1 h at 4°0 C. using a rotating wheel, before being transferred back to columns. Non-bound material was removed from the column using gravity flow through, followed by 6 CV washes in WB and an elution step with 4 ml elution buffer EB2. 50 μI of each eluted sample was analyzed using SEC (protein detection at 280 nm) with a Superose 6 increase, 5/150 GL column running in detergent free WB as SEC buffer.
[0355] The results are depicted in
[0356] The results depicted in
[0357] 1.d. Analysis of Obtained Salipro Particles
[0358] The eluate obtained after incubation of the affinity beads with 4 ml SapA (see previous section c, sample 5) was concentrated using Amicon Ultra-2 centrifugal filter with a 100 kDa molecular size cut-off. 40 μl of the concentrated sample was further analyzed by SEC using a Superose 6 increase 5/150 GL column in a detergent-free HNG buffer supplemented with 1 mM L-Asp.
[0359] Analysis of the SEC fractions by SDS-PAGE indicates (
[0360] To further validate the homogeneity of the reconstituted Salipro particles, 20 μI from fraction 14 were further analyzed by SEC using a Superose 6 increase 5/150 GL column in detergent free-HNG buffer supplemented with 1 mM L-Asp. The corresponding SEC profile (
[0361] The data presented herein clearly demonstrate that it is possible to reconstitute hydrophobic agents into Saposin particles while one of the particle components is bound to an affinity support. The data also shows that crude membranes can be used in the process of the invention.
IV Generation of Salipro Particles from Whole Cells
Example 2
[0362] In this example, a membrane protein is used as hydrophobic agent in alternative (II) of the process according to the invention. The lipids and the hydrophobic agent are provided in the form of intact cells, i.e. human embryonic kidney (HEK) cells, overexpressing the membrane protein. Said HEK cells are only contacted with a detergent without performing a mechanical cell lysis step. The eukaryotic membrane protein contains a FLAG-tag as binding moiety. Anti-FLAG affinity purification beads are used as support according to the invention. They contain anti-FLAG capture moieties that are capable of binding the FLAG-binding moiety comprised in the eukaryotic membrane protein. Addition of Saposin A to the support-bound eukaryotic membrane protein comprised in the detergent-treated membranes allows formation of saposin lipid particles containing the eukaryotic membrane protein. Thus, in this example, the assembly of the saposin lipid particles takes place entirely on the support and with the endogenous lipids that are provided in the form of detergent-treated whole cells expressing the to-be-included eukaryotic membrane protein of interest.
[0363] 2.a. Over-Expression of Membrane Protein
[0364] The coding sequence of the eukaryotic membrane protein is introduced into an expression vector encoding for an N-terminal FLAG-tag. Prior to transfection, HEK 293F cells are grown in 293 Freestyle culture media and transfected using the PEI-Max reagent using the protocol provided by the manufacturers (ThermoFisher). Transfected cells then overexpress the membrane protein. All cells are collected at around 48 hours_post transfection.
[0365] 2.b. Preparation of Solubilized Membranes
[0366] The cells overexpressing the FLAG-tagged eukaryotic membrane protein are harvested to a cell pellet. The cell pellet is then dissolved in HNG buffer II, additionally comprising a 25× protein inhibitor cocktail at a final concentration of 2×. Subsequently, a solution comprising 10% GDN in water (w/v) is added to the resuspended cells to a final concentration of 1% GDN (w/v). The sample is then incubated on a rotating wheel in a cold cabinet for 5 min. Afterwards, the sample is centrifuged at 5000 g at 4°0 C. for 5 min. The supernatant comprising the solubilized material, including the detergent-treated membranes, is recovered and incubated for another 50 min on a rotating wheel in a cold cabinet. After this incubation step, the supernatant is centrifuged at 30000 g and 4°0 C. for 30 min to remove membrane debris and then used in the next step 2.c for binding to the affinity support.
[0367] 2.c. Binding to Affinity Support and Elution
[0368] The following buffers are used: [0369] HNG buffer II: 50 mM HEPES pH 7.5, 200 mM NaCl and 10% glycerol [0370] EB3: 50 mM HEPES pH 7.5, 200 mM NaCl, 10% glycerol, 250 μg/mL FLAG-peptide
[0371] 4 columns allowing to remove non-bound material by gravity flow through are prepared by loading each column with 100 μl of equilibrated M2 anti-FLAG affinity purification beads (SigmaAldrich. Afterwards 500 μl of solubilized membranes obtained in step 2.b are added to each column. The flow-through is then re-passed three times through the column to allow efficient binding of the FLAG-tagged eukaryotic membrane protein to the affinity beads. The affinity beads loaded with the FLAG-tagged eukaryoticmembrane protein are not washed at this stage and contain the affinity bound eukaryotic membrane protein in an environment (“dead volume” of the beads) partly containing native cell membrane lipids and detergent micelles and HNG buffer II components.
[0372] Different amounts (0-6 ml) of 1 mg/ml Saposin A are added to the corresponding columns. [0373] Sample 1: 1 ml HNG buffer II [0374] Sample 2: 1 ml Saposin A [0375] Sample 3: 3 ml Saposin A [0376] Sample 4: 6 ml Saposin A
[0377] The mixtures are then transferred to four new tubes and incubated for 25 min at 4°0 C. using a rotating wheel, before being transferred back to the columns. Non-bound material is removed from the column using gravity flow through, followed by 10 CV washes in HNG buffer II and an elution step with 500 μl elution buffer EB3.
[0378] 2.d. Analysis of Salipro Particles
[0379] The eluates obtained after incubation of the affinity beads with different amounts of SapA (see previous section 2.c, samples 1 to 4) are concentrated using Amicon Ultra-2 centrifugal filters (10 kDa NMWL) at 13000 g and 4°0 C. The concentrated samples are further analyzed by SEC using a Superose 6 increase 5/150 GL column in a detergent-free HNG buffer II to detect formed Salipro particles.
[0380] It is expected that with the aforementioned experimental workflow saposin lipoprotein particles can be obtained from intact cells as starting material, which have not been subjected to a mechanical cell lysing and while the eukaryotic membrane protein of interest is bound to an affinity support. As a negative control under these conditions, no Salipro particles should be obtained when Saposin A is excluded from the liquid environment.
V Generation of Salipro Particles on Support
Example 3
[0381] In this example, the reconstitution of Salipro particles was carried out according to alternative (I) of the process of the invention, i.e. Saposin was immobilized on an affinity support. To this end, Saposin was biotinylated and bound to an avidin affinity bead matrix. Contacting the support-bound Saposin with additional untagged Saposin, lipids and optionally a hydrophobic agent allowed formation of Salipro particles according to the invention. Thus, assembly of the saposin lipid particles took place on the support.
[0382] 3a. Preparation of Biotinylated Saposin A
[0383] Saposin A was biotinylated using EZ-Link®NHS-Biotin Reagents (Thermo Fisher, reference 21343) according to the manufacturer's protocol. Quantification of the biotin number per Saposin A was then performed with Quant*Tag Biotin Kit (Vector laboratory, BDK-2000) and showed that 1.1 biotins per Saposin A molecule were present.
[0384] 3.b. Binding to Affinity Support and Elution
[0385] Monomeric avidin matrix (Thermo Fisher 20228) was prepared and washed according to the manufacturer's protocol. The biotinylated Saposin A was bound to the prepared avidin affinity matrix.
[0386] For each sample, 100 μl of biotinylated Saposin A (1.2 mg/ml) were bound to 25 p.I of avidin affinity matrix by passing the biotinylated Saposin A three times over the matrix, which was contained in a column (BioRad, Polyprep Chromatography column, art.nr 7311550). The affinity matrix was then extensively washed with HNG buffer II to ensure removal of non-bound Saposin A.
[0387] With the Saposin A loaded avidin affinity matrix, two different particle assembly conditions were evaluated: In sample 1, brain lipids and untagged Sapsosin A were added to the affinity resin with pre-immobilized Saposin A. In sample 2, brain lipids, a membrane protein (bacterial ion channel membrane protein T2) and untagged Saposin A were added to affinity resin with pre-immobilized Saposin A.
[0388] The brain lipid solution was prepared by dissolving 5 mg/ml brain lipids (Sigma-Aldrich) in 0,5% DDM and pre-incubated 5 minutes at 37° C.
[0389] The bacterial ion channel membrane protein T2 was purified as previously described in F Guettou et al., Nature structural & Molecular Biology, 21; 728-731, 2014.
[0390] The particle assembly conditions for samples 1 to 2 were as follows: [0391] Sample 1: 16 μl brain lipid solution were added to the affinity resin with pre-immobilized Saposin A and incubated 5 min at room temperature before adding 100 μl non-tagged Saposin A (1.2 mg/ml). [0392] Sample 2: 16 μl brain lipid solution were mixed with 8 μl T2 (10 mg/m1) and incubated 5 min at 37°0 C., before adding the mixture to the affinity resin with pre-immobilized Saposin A. The sample was then incubated at room temperature for 5 min before adding 100 μl non-tagged Saposin A (1.2 mg/ml).
[0393] The two samples were then incubated simultaneously at room temperature on a rotating wheel for 25 min. Subsequently, the following buffers were used to treat the sample columns: [0394] HNG buffer II: 50 mM HEPES pH 7.5, 150 mM NaCl and 10% glycerol [0395] EB4: HNG buffer supplemented with 2mM biotin (Thermo Fisher 29129)
[0396] The affinity beads were washed extensively with detergent-free HNG buffer II (3 times using 10 CV) and immobilized samples were eluted using the elution buffer EB4.
[0397] 3.c. Analysis of the obtained Salipro particles
[0398] The eluted samples were subjected to analytic SEC, using a Superdex™ 200 5/150 GL analytical gel filtration column running in HNG buffer II.
[0399] The results are shown in
[0400] Altogether, the data presented herein clearly demonstrate that it is possible to reconstitute Salipro particles using different starting materials while one of the particle components is bound to an affinity support.