Composition for clearing spheroids, method for clearing spheroids using same, and kit comprising same
11365213 · 2022-06-21
Assignee
Inventors
Cpc classification
G01N1/30
PHYSICS
C07J41/0066
CHEMISTRY; METALLURGY
International classification
C07J41/00
CHEMISTRY; METALLURGY
Abstract
Disclosed are a composition for clearing spheroids, a method for clearing spheroids using same, and a kit comprising same. The composition for clearing spheroids can clear the spheroids in a convenient and rapid manner and thus may be usefully used for imaging of spheroids and in identifying the causes of various diseases, treating the diseases, and predicting the therapeutic effects and toxicity of drugs. In addition, the composition may be used in combination with various medical devices, and in particular, can be prepared as a kit and usefully used as an in vitro medical diagnostic device.
Claims
1. A composition for clearing of a spheroid comprising 2 to 60 w/v % of a compound represented by formula 1 below, an optical isomer thereof, a hydrate thereof, or a salt thereof; and 20 to 60 w/v % of urea: ##STR00004##
2. The composition according to claim 1, wherein the composition comprises 40 w/v % of a compound represented by formula 1 below, an optical isomer thereof, a hydrate thereof, or a salt thereof; and 40 w/v % of urea.
3. The composition according to claim 1, wherein the spheroid is prepared using cells derived from brain, blood vessel, liver, lung, kidney, pancreas, heart, or intestines.
4. A method for clearing of a spheroid comprising contacting a fixed spheroid with the composition of claim 1.
5. The method of claim 4, further comprising fixing the spheroid using one or more of paraformaldehyde, ethylene glycol diglycidyl ether, dipropylene glycol diglycidyl ether, 1,4-butanediol diglycidyl ether, glycerol polyglycidyl ether, glutaraldehyde and polyacrylamide.
6. The method of claim 4, wherein the spheroid is prepared using cells derived from brain, blood vessel, liver, lung, kidney, pancreas, heart, or intestines.
7. The method of claim 4, wherein the method is conducted in a temperature range of 4° C.˜50° C.
8. A method for clearing of a spheroid comprising the following steps: pretreating a fixed spheroid with a solution containing saccharide (step 1); and clearing the spheroid pretreated in step 1 by contacting the pretreated spheroid with the composition of claim 1 (step 2).
9. The method of claim 8, further comprising fixing the spheroid using one or more of paraformaldehyde, ethylene glycol diglycidyl ether, dipropylene glycol diglycidyl ether, 1,4-butanediol diglycidyl ether, glycerol polyglycidyl ether, glutaraldehyde and polyacrylamide.
10. The method of claim 8, wherein the spheroid is prepared using cells derived from brain, blood vessel, liver, lung, kidney, pancreas, heart, or intestines.
11. The method of claim 8, wherein the method is conducted in a temperature range of 4° C.˜50° C.
12. The method of claim 8, wherein the solution containing saccharide comprises one or more of monosaccharide, disaccharide, and polysaccharide.
13. The method of claim 12, wherein the monosaccharide is fructose, galactose, glucose or mannose; the disaccharide is sucrose, lactose, maltose, trehalose, turanose or cellobiose; and the polysaccharide is dextran, diethylamino ethyl-dextran, dextrin, cellulose or β-glucan.
14. The method of claim 8, wherein the solution containing saccharide is an aqueous solution containing saccharide.
15. The method of claim 8, wherein the saccharide concentration of the solution containing saccharide is 10˜70 w/v %.
16. A kit for clearing of a spheroid comprising a spheroid clearing pretreatment composition containing a saccharide solution; and the composition for clearing spheroid of claim 1.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
(1) The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.
(2)
(3)
(4)
(5)
DESCRIPTION OF THE PREFERRED EMBODIMENTS
(6) As shown in
(7) Hereinafter, the present invention is described in detail.
(8) The present invention provides a composition for clearing spheroid comprising a compound represented by formula 1 below, an optical isomer thereof, a hydrate thereof, or a salt thereof:
(9) ##STR00002##
(10) Hereinafter, the composition for clearing spheroid is described in detail.
(11) The compound represented by formula 1 can be a compound represented by formula A below.
(12) ##STR00003##
In the formula A,
(13) R.sup.1 and R.sup.2 are independently C.sub.1-10 straight or branched alkyl; and
(14) p, q and r are independently integers of 0˜10.
(15) R.sup.1 and R.sup.2 are independently C.sub.1-5 straight or branched alky; and
(16) p, q and r are independently integers of 0˜5.
(17) R.sup.1 and R.sup.2 are methyl; and
(18) p, q and r are the integer 1.
(19) The composition for clearing spheroid of the present invention removes the lipid components that block the penetration of light and other molecules from the spheroid, does not cause structural denaturation of proteins, and hardens the tissue.
(20) In the composition for clearing spheroid, the concentration of the compound represented by formula 1 can be included in the concentration of 2-55 w/v % (weight/volume %), and can be used in the concentration of 40 w/v % for the application to a sample. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto.
(21) When the concentration of the compound represented by formula 1 is included less than 2 w/v %, the clearing rate of spheroid may be remarkably slowed, and when the concentration of the compound represented by formula 1 is included more than 60 w/v %, the compound represented by formula 1 may not be dissolved completely.
(22) The composition for clearing spheroid can further include a material that controls the osmotic pressure to accelerate the spheroid clarification. At this time, as the material for rapidly accelerating the spheroid clarification, urea, CHAPSO (3-([3-Cholamidopropyl] dimethylammonio)-2-hydroxy-1-propanesulfonate), sucrose, fructose (fructose), glycerol, diatrizoic acid, Triton X-100, Tween-20, 2,2′-thioethanol, iohexol, chloral hydrate, or a combination thereof can be used, but not always limited thereto.
(23) The material for rapidly accelerating the spheroid clarification can be included at the concentration of 5˜80 w/v %, 5˜75 w/v %, 10˜70 w/v %, 5˜50 w/v %, or 35˜60 w/v %. At this time, when the concentration is less than 5 w/v %, the rate of clearing the tissue is slowed, and when the concentration is more than 80 w/v %, crystals can be formed or cannot be dissolved in the solution. In one specific example, if urea is used as the material for rapidly accelerating the spheroid clarification, the concentration of urea can be 10˜70 w/v %, and preferably 20˜60 w/v %. In addition, the concentration of the material for rapidly accelerating the spheroid clarification can be appropriately adjusted with the preferred concentration range of the compound represented by formula 1.
(24) The said spheroid can be prepared using the cells derived from the tissues separated from the living body, specifically brain, blood vessel, liver, lung, kidney, pancreas, heart, and intestines, but not always limited thereto.
(25) That is, the composition for clearing spheroid of the present invention can be applied to the spheroid made of various cells, in particular, the spheroid and organoid prepared using the cells derived from brain, blood vessel, liver, lung, kidney, pancreas, intestine, heart, etc. The clearing can occur in whole or in part of the spheroid or organoid.
(26) After the spheroid was clarified by using the composition for clearing spheroid, before and after clarification were compared. After being clarified, the number of recognized cells was significantly increased, the brightness of the fluorescence was significantly increased, and the resolution of the shape of each cell and the shape of the nucleus was clearly confirmed in three dimensions (see Experimental Example 2 and
(27) The composition for clearing spheroid does not require expensive electrophoresis devices and expensive solutions, and improves spheroid transparency without tissue swelling, bubble formation, discoloration, and black sediment.
(28) The composition for clearing spheroid can clear spheroid conveniently and quickly, so it can be useful for imaging spheroid, and can be effectively used for identifying the causes of various diseases, treating them, and predicting the effectiveness and toxicity of drugs. In addition, the composition can be used by applying to various medical devices, and in particular, it can be used as an in vitro diagnostic device by making it as a kit.
(29) In addition, by using the above composition, it is possible to conveniently prepare and clarify spheroid at the same time, and through this, the three-dimensional distribution of cells and molecules can be imaged and observed. Therefore, observational studies can be performed with a size of several hundred micrometers or more in one complete structure for various spheroids having complex structures. So, the composition can be effectively used to identify the causes of various diseases and to predict the treatment method, and further, the effectiveness and toxicity of drugs.
(30) In another aspect of the present invention, the present invention provides a clarity method for spheroid comprising a step of clearing the immobilized spheroid by contacting it with the composition for clearing spheroid.
(31) The clarity method for spheroid includes a step of clearing the immobilized spheroid by contacting it with the composition for clearing spheroid.
(32) Particularly, in the clarity method for spheroid according to the present invention, the physicochemical properties of the spheroid are modified and made transparent to make light penetrate deeper and make it transparent by contacting the immobilized spheroid with a composition containing the compound represented by formula 1.
(33) The clarity method for spheroid according to the present invention improves spheroid transparency without bubble formation, discoloration, and black sediment, and does not lose or distort information in a desired tissue due to protein denaturation or the like. Therefore, various fluorophores such as GFP protein can be used to detect information in the tissues.
(34) In the clarity method for spheroid according to the present invention, the spheroid can be immobilized without any particular limitation, as long as it is a method of immobilizing the spheroid without causing loss of antigenicity prior to clarification.
(35) More particularly, the immobilization of the spheroid can be performed by the conventional method using paraformaldehyde, ethylene glycol diglycidyl ether, dipropylene glycol diglycidyl ether, 1,4-butanediol diglycidyl ether, glycerol polyglycidyl ether, glutaraldehyde, polyacrylamide or a combination thereof, but not always limited thereto.
(36) In the clarity method for spheroid according to the present invention, when a mixture of the compound represented by formula 1 and urea is treated, the structural binding force of the protein is increased, denaturation does not occur, the tissue is hardened, the swelling that appears in the spheroid clearing process is prevented, and the cracking of the tissue occurring in the processes of antibody treatment and washing can be prevented. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto. The reaction can be performed in a temperature range of 10° C.˜50° C., 12° C.˜48° C., 14° C.˜46° C., 16° C.˜44° C., 18° C.˜42° C., 20° C.˜40° C., 24° C.˜39° C., 28° C.˜38° C., 30° C.˜37° C., and 33° C.˜34° C.
(37) In the composition for clearing spheroid, the concentration of the compound represented by formula 1 can be included in the concentration of 2-55 w/v % (weight/volume %), and can be used in the concentration of 40 w/v % for the application to a sample. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto.
(38) When the concentration of the compound represented by formula 1 is included less than 2 w/v %, the clearing rate of spheroid may be remarkably slowed, and when the concentration of the compound represented by formula 1 is included more than 60 w/v %, the compound represented by formula 1 may not be dissolved completely.
(39) The said spheroid can be prepared using the cells derived from the tissues separated from the living body, specifically brain, blood vessel, liver, lung, kidney, pancreas, heart, and intestines, but not always limited thereto.
(40) The method can be conducted in a temperature range of 4° C.˜50° C.
(41) The composition for clearing spheroid of the present invention can include the compound represented by formula 1 or the hydrate thereof at the concentration of 2˜55 w/v % (weight/volume %), and preferably at the concentration of 4˜50 w/v %. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto. When the concentration of the compound represented by formula 1 is included less than 2 w/v %, the clearing rate of spheroid may be remarkably slowed, and when the concentration of the compound represented by formula 1 is included more than 55 w/v %, the compound represented by formula 1 may not be dissolved in the composition for clearing spheroid completely.
(42) The composition for clearing spheroid can further include a material that controls the osmotic pressure to accelerate the spheroid clarification. At this time, as the material for rapidly accelerating the spheroid clarification, urea, CHAPSO (3-([3-Cholamidopropyl] dimethylammonio)-2-hydroxy-1-propanesulfonate), sucrose, fructose (fructose), glycerol, diatrizoic acid, Triton X-100, Tween-20, 2,2′-thioethanol, iohexol, chloral hydrate, or a combination thereof can be used, but not always limited thereto.
(43) The material for rapidly accelerating the spheroid clarification can be included at the concentration of 5˜80 w/v %, 5˜75 w/v %, 10˜70 w/v %, 5˜50 w/v %, or 35˜60 w/v %. At this time, when the concentration is less than 5 w/v %, the rate of clearing the tissue is slowed, and when the concentration is more than 80 w/v %, crystals can be formed or cannot be dissolved in the solution. In one specific example, if urea is used as the material for rapidly accelerating the spheroid clarification, the concentration of urea can be 10˜70 w/v %, and preferably 20˜60 w/v %. In addition, the concentration of the material for rapidly accelerating the spheroid clarification can be appropriately adjusted with the preferred concentration range of the compound represented by formula 1.
(44) In another aspect of the present invention, the present invention provides a clarity method for spheroid comprising the following steps: pretreating a solution containing saccharide to the immobilized spheroid (step 1); and
(45) clearing the spheroid pretreated in step 1 by contacting it with the composition for clearing spheroid (step 2).
(46) In the clarity method for spheroid, step 1 is a pre-treatment step of treating a solution containing saccharide to the immobilized spheroid.
(47) The said spheroid can be prepared using the cells derived from the tissues separated from the living body, specifically brain, blood vessel, liver, lung, kidney, pancreas, heart, and intestines, but not always limited thereto.
(48) The immobilization of the spheroid can be performed by the conventional method using paraformaldehyde, ethylene glycol diglycidyl ether, dipropylene glycol diglycidyl ether, 1,4-butanediol diglycidyl ether, glycerol polyglycidyl ether, glutaraldehyde, polyacrylamide or a combination thereof, but not always limited thereto.
(49) The saccharide can be monosaccharide, disaccharide, polysaccharide, etc., and more specifically, the monosaccharide is fructose, galactose, glucose or mannose; the disaccharide is sucrose, lactose, maltose, trehalose, turanose or cellobiose; and the polysaccharide is dextran, diethylamino ethyl-dextran, dextrin, cellulose or β-glucan. Preferably, sucrose can be used as the saccharide. In addition, the solution containing saccharide is preferably an aqueous solution containing saccharide.
(50) The saccharide concentration of the solution containing (comprising) saccharide can be in the range of 10˜70 w/v %, 20˜60 w/v %, 25˜50 w/v %, and 30˜40 w/v %.
(51) When the saccharide solution is treated to the spheroid, the lipid components that block the penetration of light and other molecules are removed from the spheroid in advance and dehydration is induced, and consequently the structural binding force of the reagent that immobilizes the tissue and the spheroid is increased, which does not cause denaturation. In addition, it is possible to make the tissue harder, to prevent the tissue swelling that appears in the spheroid clearing process, and to prevent the cracking of the tissue occurring in the processes of antibody treatment and washing. However, when the saccharide concentration of the solution containing saccharide is less than 10 w/v %, there is a problem that the effect does not occur, and when the saccharide concentration of the solution containing saccharide is more than 70 w/v %, there is a problem that is not economical.
(52) In the clarity method for spheroid, step 2 is a step of clearing the spheroid pretreated in step 1 by contacting it with a composition for clearing spheroid comprising a CHAPS compound represented by formula 1 or a hydrate thereof.
(53) The step 2 includes a step of clearing the spheroid immobilized and pretreated by contacting it with a composition for clearing spheroid. Particularly, in the clarity method for spheroid according to the present invention, the physicochemical properties of the spheroid are modified and made transparent to make light penetrate deeper and make it transparent by contacting the immobilized spheroid with a composition comprising the compound represented by formula 1.
(54) The clarity method for spheroid according to the present invention improves spheroid transparency without bubble formation, discoloration, and black sediment, and does not lose or distort information in a desired tissue due to protein denaturation or the like. Therefore, various fluorophores such as GFP protein can be used to detect information in the tissues.
(55) In the composition for clearing spheroid, the concentration of the compound represented by formula 1 can be included in the concentration of 2-55 w/v % (weight/volume %), and can be used in the concentration of 40 w/v % for the application to a sample. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto.
(56) When the concentration of the compound represented by formula 1 is included less than 2 w/v %, the clearing rate of spheroid may be remarkably slowed, and when the concentration of the compound represented by formula 1 is included more than 60 w/v %, the compound represented by formula 1 may not be dissolved completely.
(57) In the clarity method for spheroid according to the present invention, the spheroid can be immobilized without any particular limitation, as long as it is a method of immobilizing the spheroid without causing loss of antigenicity prior to clarification.
(58) More particularly, the immobilization of the spheroid can be performed by the conventional method using paraformaldehyde, ethylene glycol diglycidyl ether, dipropylene glycol diglycidyl ether, 1,4-butanediol diglycidyl ether, glycerol polyglycidyl ether, glutaraldehyde, polyacrylamide or a combination thereof, but not always limited thereto.
(59) In the clarity method for spheroid according to the present invention, when a mixture of the compound represented by formula 1 and urea is treated, the structural binding force of the protein is increased, denaturation does not occur, the tissue is hardened, the swelling that appears in the spheroid clearing process is prevented, and the cracking of the tissue occurring in the processes of antibody treatment and washing can be prevented. At this time, the solution for indicating the concentration can be the generally used simulated body fluid, more particularly, distilled water, PBS (phosphate buffer saline), TBS (tris buffer solution), etc., but not always limited thereto. The reaction can be performed in a temperature range of 10° C.˜50° C., 12° C.˜48° C., 14° C.˜46° C., 16° C.˜44° C., 18° C.˜42° C., 20° C.˜40° C., 24° C.˜39° C., 28° C.˜38° C., 30° C.˜37° C., and 33° C.˜34° C.
(60) The method can be conducted in a temperature range of 4° C.˜50° C.
(61) The composition for clearing spheroid can further include a material that controls the osmotic pressure to accelerate the spheroid clarification. At this time, as the material for rapidly accelerating the spheroid clarification, urea, CHAPSO (3-([3-Cholamidopropyl] dimethylammonio)-2-hydroxy-1-propanesulfonate), sucrose, fructose (fructose), glycerol, diatrizoic acid, Triton X-100, Tween-20, 2,2′-thioethanol, iohexol, chloral hydrate, or a combination thereof can be used, but not always limited thereto.
(62) At this time, the material for rapidly accelerating the spheroid clarification can be included at the concentration of 5˜80 w/v %, 5˜75 w/v %, 10˜70 w/v %, 5˜50 w/v %, or 35˜60 w/v %. At this time, when the concentration is less than 5 w/v %, the rate of clearing the tissue is slowed, and when the concentration is more than 80 w/v %, crystals can be formed or cannot be dissolved in the solution. In one specific example, if urea is used as the material for rapidly accelerating the spheroid clarification, the concentration of urea can be 10˜70 w/v %, and preferably 20˜60 w/v %. In addition, the concentration of the material for rapidly accelerating the spheroid clarification can be appropriately adjusted with the preferred concentration range of the compound represented by formula 1.
(63) In another aspect of the present invention, the present invention provides a kit for clearing spheroid comprising a spheroid clearing pretreatment composition containing a saccharide solution; and a composition for clearing spheroid of claim 1.
(64) The composition for clearing spheroid comprising the compound represented by formula 1 can clear spheroid conveniently and quickly, so the kit for clearing spheroid comprising the same can be useful for imaging spheroid, and can be effectively used for identifying the causes of various diseases, and predicting the therapeutic effect, effectiveness and toxicity of drugs.
(65) Hereinafter, the present invention will be described in detail by the following examples and experimental examples.
(66) However, the following examples and experimental examples are only for illustrating the present invention, and the contents of the present invention are not limited thereto.
Experimental Example 1
Confirmation of Change in Size of Clarified Tissue
(67) In order to evaluate the ability to clarify the spheroid of the composition for clearing the stem cell aggregate (spheroid) according to the present invention, specifically, to confirm that the clearing is well performed without damaging the spheroid, the following experiment was performed.
(68) All the animal tests described in this statement were performed according to the guidance (Approval No. RS17003) of Committee for Animal Resources, Korea Institute of Toxicology.
(69) Step 1: Formation and Immobilization of Spheroid
(70) First, mother mice were anesthetized with isoflurane (1 cc/min), an inhalation anesthetic, and the hearts of 15 fetuses were extracted. The extracted fetal hearts were placed in 0.2% trypsin solution, followed by chopping. The chopped heart tissues were placed in an enzyme solution and incubated for 20 minutes. The heart cells were well separated and sprayed on the SpheroidFilm. Then, a spheroid was allowed to form in the cell incubator. After formation of the spheroid, molecular probes qtracker 525 labeling kit (Cat #Q25049) for cytoplasm staining and DAPI (sigma Cat #D 9542) for nuclear staining were treated for 2 hours. When the cytoplasm and nucleus were stained, washing was performed with PBS and the spheroid was fixed with paraformaldehyde for 12 hours.
(71) Step 2: Clarification of Spheroid Using Composition
(72) To prevent spheroid damage, SpheroidFilm was added to 1% low melting agarose in a 45° C. aqueous solution. The SpheroidFilm was sufficiently moistened with agarose and then hardened at room temperature. In the case of bubbling, the bubbles were removed using an insulin syringe needle and then the film was hardened at room temperature. The SpheroidFilm fixed with agarose was incubated in a mixed solution containing CHAPS (40 w/v %) and urea (40 w/v %) at 37° C., at 100 rpm for 24˜48 hours. The clarified spheroid was washed with distilled water for 4 hours. Finally, the sample was placed in a mounting solution and incubated for 24 hours.
(73)
(74) As shown in
(75) As shown in the above results, it was confirmed that the spheroid could be conveniently prepared and clarified simultaneously by using the composition for clearing spheroid of the present invention.
Experimental Example 2
Analysis of Clarified Spheroid
(76) To confirm the degree of clarification of the spheroid clarified in Experimental Example 1, the number of recognizable cells in the spheroid and the fluorescence brightness before and after clarification were measured.
(77) 2-1. Measurement of Number of Recognized Cells in Spheroid Before and After Clarification
(78) The changes in the number of cells before and after clarification were observed, and the results were analyzed with a JuLI live cell movie analyzer and shown in
(79) The left diagram of
(80) As shown in the left diagram of
(81) 2-2. Measurement of Fluorescence Brightness of Spheroid Before and After Clarification with General Microscope
(82) The fluorescence brightness before and after clarification was compared using a general microscope, and the results are shown in
(83) As shown in the right diagram of
(84) In addition, it was visually confirmed from the DIC results that the spheroid was clarified.
(85) 2-3. Measurement of Fluorescence Brightness of Spheroid After Clarification with Microscope
(86) To obtain three-dimensional bioimages, green fluorescence and DAPI signals were confirmed using 5× objective lens under a macro laser light-sheet illumination imaging system confocal microscope. The results are shown in
(87)
(88) As shown in
(89) The composition for clearing spheroid comprising the compound of formula 1 of the present invention can clear spheroid conveniently and quickly, so it can be useful for imaging spheroid, and can be effectively used for identifying the causes of various diseases, treating them, and predicting the effectiveness and toxicity of drugs. In addition, the composition can be used by applying to various medical devices, and in particular, it can be used as an in vitro diagnostic device by making it as a kit.