COMPOSITION FOR USE IN TREATMENT OF ALLERGIC DISEASES
20220153806 · 2022-05-19
Assignee
Inventors
Cpc classification
A61P1/04
HUMAN NECESSITIES
A61K35/17
HUMAN NECESSITIES
C07K2319/30
CHEMISTRY; METALLURGY
C12N15/86
CHEMISTRY; METALLURGY
International classification
C07K14/705
CHEMISTRY; METALLURGY
A61K35/17
HUMAN NECESSITIES
Abstract
The present invention provides a composition and method for treating an allergic disease. The composition comprises a ligand for asialoglycoprotein receptor 1 (Asgr1). The allergic disease may be atopic dermatitis, allergic rhinitis, urticaria, allergic asthma, allergic conjunctivitis, allergic gastrointestinal inflammation, or anaphylactic shock. The allergic disease may be caused by house dust mites. The present invention also provides a method for determining if a test compound activates human Asgr1.
Claims
1. A composition for use in treatment of an allergic disease, the composition comprising a ligand for asialoglycoprotein receptor 1 (Asgr1).
2. The composition of claim 1, wherein the allergic disease is one or more selected from the group consisting of atopic dermatitis, allergic rhinitis, urticaria, allergic asthma, allergic conjunctivitis, allergic gastrointestinal inflammation., and anaphylactic shock.
3. The composition of claim 1, wherein the allergic disease is caused by a house dust mite.
4. The composition of claim 1, wherein the ligand comprises at least one glycan selected from the group consisting of a T antigen, a Tn antigen, LeA, and Lex.
5. The composition of claim 1, wherein the ligand comprises a polymeric scaffold presenting at least one glycan selected from the group consisting of a T antigen, a Tn antigen, LeA, and Lex.
6. The composition of claim 1, wherein the ligand is a mucin-like protein or mucin.
7. The composition of claim 1, wherein the ligand is a ligand for human asialoglycoprotein receptor 1.
8. An animal cell expressing a fusion protein comprising: an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ, wherein the animal cell has a gene encoding a reporter operably linked to a promoter activated by a CD3ζ signal.
9. A method of testing that a test compound activates human asialoglycoprotein receptor 1, the method comprising: contacting the animal cell of claim 8 with a test compound; and determining if the test compound binds to human asialoglycoprotein receptor 1 when a reporter expression level is enhanced.
10. A method of treating an allergic disease, comprising administering the compound of claim 1 to a subject.
11. The method of claim 10, wherein the allergic disease is one or more selected from the group consisting of atopic dermatitis, allergic rhinitis, urticaria, allergic asthma, allergic conjunctivitis, allergic gastrointestinal inflammation, and anaphylactic shock.
12. The method of claim 10, wherein the allergic disease is caused by a house dust mite.
13. The method of claim 10, wherein the subject is a human.
Description
BRIEF DESCRIPTION OF DRAWINGS
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DETAILED DESCRIPTION OF THE INVENTION
[0041] Herein, “subject” may be a mammal, including, for example, pets such as dogs, cats, rabbits, hamsters, guinea pigs, and squirrels; livestock such as cows, pigs, horses, sheep, and goats; and primates such as monkeys, chimpanzees, orangutans, gorillas, bonobos, and humans.
[0042] “Treatment” is used herein in the sense including therapeutic and prophylactic treatments. Treatment may be used herein in the sense including suppressing a disease or deterioration of a condition, delaying a disease or deterioration of a condition, improving a disease or a condition, or healing of a disease or a condition. Prevention may be used herein in the sense suppressing onset of a disease or a condition or delaying onset of a disease or a condition.
[0043] Herein, “allergy” means a systemic or local disorder with respect to a living organism based on an immune response. Allergies are broadly divided into allergies (type I, type II, and type HD based on humoral immune response by blood antibodies and allergies (type IV) based on cellular immunity by sensitized lymphocytes.
[0044] Type I allergies are allergies also called immediate allergies or anaphylactic types. IgE is involved in type I allergies, and, when IgE binds with IgE receptors (FcεRI) located on the cell surface of mast cells or basophils in the blood or tissue, and an allergen binds thereto, a chemical mediator such as histamine is released from the mast cells or basophils, thereby causing allergic reactions (e.g., smooth muscle contraction, vascular hyperpermeability, and glandular hypersecretion). Type I allergies include atopic bronchial asthma, allergic rhinitis, urticaria, allergic conjunctivitis, atopic dermatitis, and anaphylactic shock. It is known that, in type I allergies, housing dust, mites, and the like enter the body and cause an allergic reaction (which may enter via routes such as oral route, inhalation route, transdermal route, and transvenous route).
[0045] Type II allergies are based on cytotoxicity caused by reaction of IgG or IgM with cells, tissue antigens, and the like and binding of a complement thereto. Antibody-dependent cellular cytotoxicity (ADCC) in which macrophages, killer cells and the like having IgG Fc receptors bind to IgG bound to an antigen of the cell membrane and damage the cells are also included in type II allergies. Type II allergies include hemolytic anemia due to incompatible blood transfusion, autoimmune hemolytic anemia, idiopathic thrombocytopenic purpura, drug-induced hemolytic anemia, granulocytopenia, thrombocytopenia, and Goodpasture's syndrome. Type III allergies are also called immunocomplex type or Arthus type, and are based on tissue damage by the immunocomplex of a soluble antigen with IgG or IgM. Type III allergies include serum disease, autoimmune diseases such as systemic lupus erythematosus and rheumatoid arthritis, glomerulonephritis, hypersensitivity pneumonia, allergic bronchopulmonary aspergillosis. Type IV allergies are also called delayed allergies, and are based on reaction of sensitized T cells with an antigen to release cytokines from the sensitized T cells, resulting in cytotoxicity. Type IV allergies are also based on virus-infected cells by killer T cells, tumor cells, and impairment to grafts. Type IV allergies include allergic contact dermatitis, atopic dermatitis, hypersensitivity pneumonia, tuberculous cavities, leprosy, epithelioid cell granuloma lesions of sarcoidosis, smallpox rash, and measles rash.
[0046] Herein, “asialoglycoprotein receptor” is a receptor that binds to a glycoprotein wherein sialic acid at a terminal end of a glycan of a protein is removed and the inner galactose residue is exposed as a terminal group, i.e., an asialoglycoprotein (AGP). The asialoglycoprotein receptor is present on a surface of hepatocytes and binds to AGP in the blood to remove the AGP from the blood. Asialoglycoprotein receptor 1 (ASGR1) is also called C-type lectin domain family member H1 or CLEC4H1. A representative example of human ASGR1 protein can be a protein having an amino acid sequence registered with GenBank under registration number CAG46849.1. “ASGR1”, as used herein, is used in the sense including an ortholog of human ASGR1.
[0047] Herein, “Clec10a” is also called C-type lectin domain family 10, member A, which is a molecule that recognizes glycans and functions as a host's biological defense system. Clec10a can specifically bind to galactose or N-acetylgalactosamine.
[0048] In the present specification, “house dust mite” is a mite belonging to the genus Dermatophagoides. Main species of house dust mites are Dermatophagoides farinae, Dermatophagoides microceras, Dermatophagoides pteronyssinus, and Euroglyphus maynei.
[0049] “Antigen”, as used herein, means a substance that provides an epitope with which a lectin may be reacted in the case of antibodies or sugars. In the context of glycans, “antigen” means a glycan that provides an epitope with which a lectin may be reacted, in accordance with its ordinary word meaning. Thus, when used in the context of glycans, “antigen” means providing a glycan to a skin surface of the glycan as an epitope with which a lectin may be reacted, as is found in natural glycans and glycoproteins.
[0050] Herein, “ligand” refers to a counterpart substance to which the receptor binds. The ligand may control a downstream signal of a receptor by binding to the receptor. Herein, substances that positively regulate downstream signals of receptors are called “agonists.” Herein, substances that negatively regulate downstream signals of receptors are called “antagonists.”
[0051] Herein, “GalNAc” means N-acetylgalactosamine, and “GlcNAc” means N-acetylglucosamine.
[0052] The present inventors discovered that Clec10a is involved in the onset and exacerbation of dermatitis due to house dust mites in mice and that Asgr1 is involved therein in humans. From the results of functional analysis and homology analysis, the present inventors also discovered that human Asgr1 is an original structural and functional counterpart of mouse Clec10a. The present inventors also discovered that the house dust mites include a substance that binds to and activates mouse Clec10a and human Asgr1 and suppresses development of an allergy (e.g., Clec10a ligand or Asgr1 ligand). The present inventors further discovered that the Clec10a ligand includes an O-linked glycan, in particular, a T antigen (Galβ(1-3)GalNAc) or a Tn antigen (αGalNAc), and that ASGR1 binds to both of them. The present inventors also discovered that the Clec10a ligand suppresses TLR4 signals.
[0053] The T antigen (Galβ(1-3)GalNAc) and the Tn antigen (αGalNAc) are each a glycan having a structure as shown in a schematic diagram shown below in Formula (I). Binding of Asgr1 to a T antigen and a Tn antigen is consistent with Asgr1 having affinity for galactose or N-acetylgalactosamine.
[0054] The glycans may be presented on the polymeric scaffold. For example, the glycans may be linked on side chains of polymeric scaffolds having, as their backbone, biocompatible polymers such as polylactic acid, polyacrylamide, polyvinyl, polyvinyl alcohol, polymethyl methacrylate, polyacrylonitrile, polystyrene, polypropylene, polyethylene terephthalate, nylon, collagen, hydroxyethyl methacrylate, chitosan, chitin, polyethylene oxide, polyethylene glycol, polyamino acid, polylactide, polyglycolide, polycaprolactone, and copolymers thereof, and presented to Clec10a. Whether or not the glycan presented on the polymeric scaffold activates Clec10a or Asgr1 can be confirmed using CD3 reporter cells which will be described below. In the above, the respective polymers are not particularly limited as long as they have administrable physical properties (e.g., viscosity, osmotic pressure, etc.). For example, biocompatible polymers having a weight average molecular weight from 1 kDa to 100 kDa, from 5 kDa to 50 kDa, from 10 kDa to 40 kDa, or from 20 to 40 kD can be used as their backbone.
[0055] According to the present invention, when a nonsense mutation or a frameshift mutation was introduced into Clec10a, which is a mouse counterpart of asialoglycoprotein receptor 1 (Asgr1), the response to HDM became excessive. When extracts (purified) containing a Clec10a ligand were also prepared and contacted with human Asgr1-CD3 reporter cells, Asgr1 responded to the Clec10a ligand in a concentration dependent manner This activation was also offset, in a concentration dependent manner, by the addition of galactose to the system. From this, it can be concluded that the ligand for asialoglycoprotein receptor 1 (Asgr1) can be used to treat a TLR4 signal-induced disease or symptom (e.g., inflammation and an allergic disease) such as a house dust mite-induced allergy.
[0056] Accordingly, the present invention provides a composition for use in treatment of an allergic disease, including a ligand for asialoglycoprotein receptor 1 (Asgr1). The present invention provides a composition for use in treatment of a disease or symptom (e.g., inflammation and an allergic disease) induced by activation of a TLR4 signal, including a ligand for asialoglycoprotein receptor 1 (Asgr1). The TLR signal can be activated by a TLR4 ligand. TLR4 ligand includes lipopolysaccharide (LPS) and lipoteichoic acid, and agonists that are analogs thereof. Thus, the ligand for asialoglycoprotein receptor 1 (Asgr1) can be used to treat diseases or conditions (e.g., inflammation and allergic diseases) induced by an allergen including these TLR4 ligands. Accordingly, the present invention provides a composition for use in treatment of a disease or symptom induced by an allergen including a TLR4 ligand, wherein the composition contains a ligand for asialoglycoprotein receptor 1 (Asgr1).
[0057] The ligand for asialoglycoprotein receptor 1 (Asgr1) include a glycan from which sialic acid is released and which has Lewis X at its terminal, and a protein having the glycan. The ligand for asialoglycoprotein receptor 1 (Asgr1) include a glycan from which sialic acid is released and which has a T antigen or a Tn antigen at its terminal, and a protein having the glycan. T antigen means Galβ(1-3)GalNAc, and Tn antigen means αGalNAc. The ligand for asialoglycoprotein receptor 1 (Asgr1) may be one, two or all O-linked glycans from which sialic acid is released and which is/are selected from the group consisting of a Lewis X antigen, a T antigen, and a Tn antigen at the terminal, or a protein having the glycan. The mucin-like protein has the O-linked glycan and has a glycan selected from the group consisting of a Lewis X antigen, a T antigen, and a Tn antigen. Thus, the ligand for asialoglycoprotein receptor 1 may be a mucin-like protein or mucin. The protein as the ligand for asialoglycoprotein receptor 1 (Asgr1) can be a mucin-like protein or mucin.
[0058] Asgr1 is highly expressed in hepatocytes in vivo, and aged protein (asialoglycoprotein) desialylated in vivo is taken into hepatocytes and removed from the blood. Thus, such desialylated glycoproteins may all be used as the ligand for asialoglycoprotein receptor 1. Asgr1 binds to and reacts with a glycan having at least one or both of a T antigen and a Tn antigen. Thus, a glycan having at least one or both of a T antigen and a Tn antigen or a protein having this glycan can all be used as the ligand for asialoglycoprotein receptor 1. Also, all the ligands for asialoglycoprotein receptor 1 can be obtained by affinity purification of allergen-containing substances (e.g., HDM extracts) based on binding affinity with Clec10a (e.g., mouse Clec10a or human Asgr1). Elution of the Clec10a ligand from Clec10a can be performed, for example, using galactose. A Clec10a ligand eluate may be dialyzed with saline.
[0059] Fusion proteins including an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ transmitted a CD3t signal to the downstream in the presence of the ligand for asialoglycoprotein receptor 1. Therefore, with a fusion protein including the extracellular region and the transmembrane region of human asialoglycoprotein receptor 1 and the intracellular region of CD3ζ, a substance for use in treatment of an allergic disease can be confirmed. For example, it can be confirmed that a test compound is a compound that binds to human asialoglycoprotein receptor 1 by contacting the compound with an animal cell expressing a fusion protein including the extracellular region and the transmembrane region of human asialoglycoprotein receptor 1 and the intracellular region of CD3ζ, the animal cell having a gene encoding a reporter operably linked to a promoter (for example, an NFAT promoter) that activated by a CD3ζ signal. In addition, it is possible to confirm that the obtained substance is a substance for use in treatment of an allergic disease using control signaling via inhibitory ITAM as an index.
[0060] Also, for the allergy suppressive effect of compounds (candidate compounds for the ligand for human Asgr1), for example, compounds can be applied to LPS-induced dermatitis to confirm the effect of suppressing dermatitis.
[0061] Thus, in an embodiment of the present invention, there are provided a fusion protein including an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ, and an animal cell that expresses the fusion protein. Also in an embodiment of the present invention, the animal cell may have a gene encoding a reporter operably linked to a promoter activated by a CD3ζ signal. In an embodiment of the present invention, there is provided a method of confirming that a test compound is a compound that binds to human asialoglycoprotein receptor 1 by contacting the compound with an animal cell expressing a fusion protein including an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ, the animal cell having a gene encoding a reporter operably linked to a promoter that activated by a CD3ζ signal.
[0062] In an aspect of the invention, the test compound may contain a ligand for asialoglycoprotein receptor 1 (Asgr1). In a certain aspect of the invention, a ligand of the test compound may be at least one glycan selected from the group consisting of a T antigen and a Tn antigen. In a certain aspect of the invention, the ligand may be a mucin-like protein or mucin. In a certain aspect of the invention, the ligand may be a ligand for human asialoglycoprotein receptor 1.
[0063] The animal cell expressing a fusion protein including an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ, the animal cell having a gene encoding a reporter operably linked to a promoter that activated by a CD3ζ signal can also be used in compound screening. Therefore, the present invention provides a method for screening for a human Asgr1 ligand or agonist, the method including contacting a test compound with an animal cell expressing a fusion protein including an extracellular region and a transmembrane region of human asialoglycoprotein receptor 1, and an intracellular region of CD3ζ, the animal cell having a gene encoding a reporter operably linked to a promoter that activated by a CD3 signal. When the reporter activity is observed, it indicates the test compound is a candidate for the human Asgr1 ligand or agonist.
[0064] The animal cell may preferably be a human cell.
[0065] The compositions of the present invention may be compositions such as personal care compositions and pharmaceutical compositions.
[0066] Pharmaceutical compositions include, for example, pharmaceutical compositions for topical administration and can be used in the present invention. The pharmaceutical composition for topical administration may be a pharmaceutical composition for mucosal or body surface application, and examples thereof include eye drops, eye ointments, sublingual tablets, buccal tablets, troches, gargling agents, sprays, aerosols, and inhalants; solution formulations such as solutions, irrigation agents, glycerin formulations, tartar formulations, aqueous formulations, and coating agents; dispersion formulations such as emulsions, suspensions, liniments, lotions, sprays, and liposomes; semi-solid formulations such as ointments, plasters, patches, adhesive tapes, pastas, cataplasms, cream, oil agents, and sticks; and leaching formulations such as extracts (soft extract, dry extract) and tinctures.
[0067] According to the invention, the pharmaceutical composition may contain a pharmaceutically acceptable additive. The pharmaceutically acceptable additive includes solvents, bases, diluents, volume fillers, fillers, and auxiliaries; dissolution aids, solubilizers, buffers, isotonizing agents, emulsifiers, suspending agents, dispersants, thickeners, gelling agents, curing agents, absorbents, adhesives, elastic agents, plasticizers, sustained release agents, and propellants; antioxidants, preservatives, humectants, light blocking agents, antistatic agents, fragrances, flavoring agents, coloring agents, and mitigating agents.
[0068] Personal care compositions include, for example, skin care, antiperspirant, deodorant, cosmetic, cosmetic, and hair care products. Personal care compositions include moisturizers, conditioners, anti-aging agents, whitening agents, sunscreens, antiperspirants, shaving compositions, post-shave compositions, foundations, lipsticks, lipsticks, styling compositions, shampoos, cleansers, and lubricants. The personal care composition may be used in personal care products. Personal care products include undergarments, diapers, tissues, wipes, masks, and patches. The composition may contain an additive in addition to the active ingredient. The composition can be in dosage form suitable for administration, such as intravenous administration, transdermal administration, oral administration, enteral administration, and intraperitoneal administration. For the prevention and/or treatment of dermatitis, the composition of the present invention may be administered by transdermal administration, and may be, for example, in the form of a gel, an emulsion, a cream, a liquid, a paste, a lotion, a liposome cream, or the like (for example, a dermatological composition). In an aspect, the composition may be an ointment. In the case of transdermal administration, a dermatologically acceptable additive may be used, and a dosage form suitable therefor can be used. In the case of transmucosal administration, the additive that can be used may be an additive acceptable for mucosal application, and a dosage form suitable therefor may be used.
[0069] The present invention provides use of an Asgr1 ligand in the manufacture of a composition for use in treatment of an allergic disease.
[0070] The present invention provides a method of treating an allergic disease in a subject in need thereof, including administering to the subject an effective amount of an Asgr1 ligand.
[0071] The present invention provides a method of preventing an allergic disease or suppressing development of the allergic disease, including administering to a subject an effective amount of an Asgr1 ligand.
EXAMPLES
[0072] Method
[0073] (1) Preparation of Skin Cell
[0074] Skin cells were minced by pinching the thin-sculpted dorsal skin samples and incubated for 60 minutes in an RPMI-1640 medium containing 200 U/mL collagenase II, 50 U/mL DNase and 10% fetal bovine serum (FBS). Additional dissociation and homogenization were performed using gentleMACS Disociator (Miltenyi Biotec). The resulting cells were filtered through a 55-μm nylon mesh to obtain a single cell suspension.
[0075] (2) Flow Cytometry
[0076] Flow cytometry and cell sorting were performed using FACS LSRFortessa and FACS Aria (BD Biosciences), respectively. FlowJo software (Tree Star) was used for analysis of data. Dead cells were stained with propidium iodide solution (Sigma-Aldrich, P4864) and removed.
[0077] (3) Histology and Immunohistochemical Staining
[0078] For histological analysis, dorsal skin samples harvested from mice were formalin-fixed and paraffin-embedded to create 4 μm thick sections. Sections were stained with hematoxylin-eosin and analyzed by optical microscopy. Epithelial thickness was measured in five regions per mouse and at five sites per region.
[0079] For immunohistochemical staining, skin samples harvested from mice were embedded in TissueTek Optimal Cutting Temperature Compound (Sakura Finetek Japan) and stored at −80° C. Four (4) μm-thick sections were also used in immunohistochemical staining. The sections were washed with PBS containing 0.05% Tween-20 (PBS-T, pH 7.4), stained and incubated for 10 min at room temperature using Blocking One Histo (Nacalai). The sections were then washed with PBS-T, incubated overnight at 4° C. using anti-Clec10a mAb, washed with PBS-T and incubated using Alexa Fluor 546 labeled anti-rat IgG polyclonal antibody for 1 hour. After washing with PBS-T, the sections were subjected to nuclear staining with DAPI.
[0080] Human healthy skin tissue was harvested from the periphery of the patient's tumor region, formalin-fixed, paraffin-embedded into 4 μm-thick sections. The sections were deparaffinized with xylene, and rehydrated with ethanol, and endogenous peroxidase was blocked with methanol. The sections were stained with anti-CD69 antibodies and anti-Asgr1 antibodies according to the manufacturer's manual for Opal 4-Color Automation IHc Kit (PerkinElmer, NEL820001KT). Briefly, the sections were incubated at 95° C. for 15 minutes, washed with TBS (TBS-T) (Takara Bio, T9142) containing 0.05% Tween-20 and treated with a blocking solution at room temperature for 10 minutes. The sections were incubated overnight at 4° C. with anti CD68 antibodies or mouse IgG1 antibodies, washed with TBS-T and treated with Opalpolymer HRP in a wet chamber at room temperature for 30 minutes. After washing with TBS-T, the sections were incubated using Opal Fluorophore Working Solution in a wet chamber at room temperature for 10 minutes and washed with TBS-T. The antibodies for the first staining were removed from the sections by heating at 95° C. The sections were then stained with anti-CD9 antibodies or rabbit IgG antibodies as in the first staining. The sections were subjected to nuclear-staining with a spectral DAPI solution.
[0081] (4) House Dust Mite (HDM)-Induced Dermatitis
[0082] In the first induction (Day 0), the hair on the skin in the back of anesthetized mice was removed using an electronic clipper, and the remaining hair was epilated using hair removal cream. One hundred (100) mg of HDM (Dermatophagoides farinae) ointment (Biostir, Japan) was administered topically to the skin in the shaved back. From the second induction, the skin bather function was disrupted by applying 150 μL 4% sodium dodecyl sulfate to the dorsal skin 2 hours prior to the HDM ointment administration. These procedures were repeated twice weekly. Several factors (erythema/hemorrhage and scar/dryness) were scored on Days 3, 6, 14, and 21 according to an evaluation criterion of 0 (none), 1 (mild), 2 (moderate) or 3 (severe) according to the manufacturer's instructions (Biostir). The sum of the scores was taken as overall dermatitis score.
[0083] (5) Establishment of RAW264.7 Transformant
[0084] Clec10a cDNA was made from C57BL/6J mice or NC/Nga mice and labeled with a sequence encoding a Flag tag and subcloned into a pMXs-IRES-GFP retroviral vector. A RAW264.7 transformant stably expressing C57BL/6J type or NC/Nga type Clec10a was established based on a routine method.
[0085] (6) ELISA Assay
[0086] Serum IgE antibodies were measured using capturing antibodies against mouse IgE (R35-72) and biotinylated anti-mouse IgE (R35-118) followed by HRP-labeled streptavidin (Ge Healthcare, RPN1231V). Purified mouse IgE (C38-2, BD Biosciences) was used as a standard. Serum IgG1 was measured using capturing antibodies against mouse IgG1 (A85-3) and HRP-labeled antibodies against mouse IgG1. Purified mouse IgG1 (107.3, BD Biosciences) was used as a standard. Serum IgG2c was detected by mouse ELISA Quantitation Set (Bethyl, E90-136).
[0087] (7) Preparation of Bone Marrow Macrophage (BMMP)
[0088] Bone marrow cells were cultured on a culture dish (Corning, 430166 or 430167) in an RPMI1640 complete medium containing 10% FBS in the presence of 10 ng/ml GM-CSF (Rd Systems) and 7 ng/mL IL-4 (Wako). On Day 2, 70% of non-adherent cells were removed and a fresh medium containing GM-CSF and IL-4 was added. On Day 5, 100% of non-adherent cells were removed by washing with PBS and a fresh medium containing GM-CSF and IL-4 was added. On Day 7, all non-adherent cells were removed by PBS wash and adherent cells were used in later experiments. For the analysis of cytokine secretion and Syk phosphorylation, CD115.sup.+ BMMP was concentrated using anti CD115 antibodies (BioLegend) and anti-rat IgG microbeads (Miltenyi Biotec).
[0089] (8) Analysis of Cytokine Secretion
[0090] CD115.sup.+BMMP was stimulated with 100 μg/mL HDM extract (Dermatophagoides farinae) (COSMO BIO), 1 ng/mL lipopolysaccharide, or 200 pg/mL Pam7CSK4 in the presence or absence of 0.5 μM TAK-242 (Merck) for 15 minutes. After 6-hour stimulation, culture supernatants were collected and the concentration of each cytokine was determined using cytometric bead array analysis (BD Biosciences).
[0091] (9) Synthesis of cDNA and Real-Time PCR (RT-PCR)
[0092] Total RNA was extracted from skin tissue or cells sorted by flow cytometry using Isogen reagent (Nippon Gene). Skin MP was sorted by CD45.sup.+MHCII.sup.+CD3.sup.−CD19.sup.−NK1.1.sup.−Ly-6G.sup.−EpCAM.sup.−CD64.sup.+and DC was sorted by CD45.sup.+MHCII.sup.+CD3.sup.−CD19.sup.−NK1.1.sup.−Ly-6G.sup.−EpCAM.sup.−CD64.sup.−). CD3.sup.+CD4.sup.+ cells were also obtained. cDNA was synthesized using High Capacity RNA-to-cDNA Kit (Applied Biosystems). Gene expression of Clec10a and inflammatory cytokines was measured by quantitative RT-PCR using SYBR Gree Master Mix (Applied Biosystems) and specific primers. An expression level of Gapdh was used as an internal reference for standardized data. The primer sequences used were as shown in Table 1 below.
TABLE-US-00001 TABLE 1 Gene name Forward Reverse Clec10a 5′-ACCCAAGAGCCTGGTAAAGC-3′ 5′-GATCCAATCACGGAGACGAC-3′ Tnf 5′-GGGCCACCACGCTCTTC-3′ 5′-GGTCTGGGCCATAGAACTGATG-3′ Il6 5′-GAGGATACCACTCCCAACAGACC-3′ 5′-AAGTGCATCATCGTTGTTCATACA-3′ Cxc;1 5′-ACTCAAGAATGGTCGCGAGG-3′ 5′-GTGCCATCAGAGCAGTCTGT-3′ Cxcl2 5′-AAGTTTGCCTTGACCCTGAA-3′ 5′-AGGCACATCAGGTACGATCC-3′ Ifng 5′-ACAGCAAGGCGAAAAAGGATG-3′ 5′-TGGTGGACCACTCGGATGA-3′ Il4 5′-ATCATCGGCATTTTGAACGAGG-3′ 5′-TGCAGCTCCATGAGAACACTA-3′ Il17 5′-TTTAACTCCCTTGGCGCAAAA-3′ 5′-CTTTCCCTCCGCATTGACAC-3′ Il10 5′-GCTGGACAACATACTGCTAACC-3′ 5′-ATTTCCGATAAGGCTTGGCAA-3′ Tbx21 5′-AGCAAGGACGGCGAATGTT-3′ 5′-CGGTGGACATATAAGCGGTTC-3′ Gata3 5′-TTATCAAGCCCAAGCGAAGG-3′ 5′-CATTAGCGTTCCTCCTCCAGAG-3′ Rcrc 5′-GGAGGACAGGGAGCCAAGTT-3′ 5′-CCGTAGTGGATCCCAGATGACT-3′ Foxp3 5′-CCCATCCCCAGGAGTCTTG-3′ 5′-ACCATGACTAGGGGCACTGTA-3′ Gapdh 5′-TGGTGAAGGTCCGTGTGAAC-3′ 5′-ATGAAGGGGTCGTTGATGGC-3′
[0093] (10) Retroviral Gene Transfer
[0094] Wild-type Clec10a cDNA was subcloned into a pMXs-puro retroviral vector (Cell Biolabs). To create site-specific Clec10a mutants, the PCR primers of the sense strands were designed so as to contain phenylalanine (TTC) instead of tyrosine (TAC). The resulting mutant cDNA was confirmed by sequencing. Retroviruses were obtained by transfecting 293GP packaging cells with wild-type or mutant Y3F cDNA or VSV-G expression vector pCMV-VSV-G. BMMP was infected with viral supernatants added with polybrene (8 μg/ml, Sigma-Aldrich) on Days 2 and 4. After centrifugation, the supernatants containing viruses were removed and the medium was replaced with a fresh BMMP medium. On Day 5, the medium was replaced with a fresh BMMP medium and non-adherent cells were removed by washing with PBS wash on Day 7 and adherent cells were used in the experiment.
[0095] (11) Preparation of Clec10a-Fc Chimera
[0096] A mouse Clec10a chimeric construct (Clec10a-Fc) was made by cloning the extracellular region of mouse Clec10a into a pME18S expression vector containing the Fc region of human IgG1. Clec10a-Fc was transfected into HEK293T cells using Lipofectamine 2000 (Thermo Fisher Scientific) and the medium was then replaced with GIT medium (KOHJIN BIO). Clec10a-Fc was purified from the culture supernatants using protein a agarose (Bio-Rad Laboratories).
[0097] (12) Isolation of Clec10a Ligand
[0098] An HDM extract dissolved in a buffer containing 150 mM NaCl, 50 mM Tris, 1 mM CaCl.sub.2, and 0.01% Tween 20 was subjected to a pull-down assay using Clec10a-Fc. The ligand bound to Clec10a-Fc was eluted using 30 mM EDTA or 200 mM galactose. The eluate was dialyzed with a centrifugal filter unit (Merck, UFC503024) using PBS as an external fluid, named Clec10a-L, and used as one of Clec10a ligands.
[0099] (13) Alcian Blue Staining and Silver Staining
[0100] The Clec10a ligand was developed by SDS-PAGE. Immediately after electrophoresis, the gel was washed with deionized water and 10% acetate buffer (deionized water with 10% acetic acid and 30% ethanol) and stained for 2 hours at room temperature with or without an alcian blue solution (pH 2.5) (Wako, 013-13801) and then destained with 3% acetate buffer and 10% acetate buffer. The gel was silver-stained according to the manufacturer's instructions (Pierce Silver Stain Kit, Thermo Fisher Scientific).
[0101] (14) Fractionation of Clec10a Ligand
[0102] The Clec10a ligand was developed by SDS-PAGE and the gel was cut out in a manner of separating according to size. The cut gels were mechanically milled and incubated overnight in PBS with agitation. The supernatant was collected after centrifugation at 17400 g for 10 minutes and dialyzed with a centrifugal filter unit (Merck, UFC503024) using PBS as an external fluid.
[0103] (15) Immunoblotting
[0104] To analyze phosphorylation of Syk, BMMP was stimulated with an HDM extract (100 μg/mL) at 37° C. for 0, 10, or 30 minutes. The stimulated BMMP was lysed with a 1% NP-40 lysis buffer and separated by SDS-PAGE. It was transferred onto a PVDF membrane by electroblotting, immunoblotted with anti-phosphorylated Syk antibodies and anti-Syk antibodies, and detected using HRP-labeled anti-rabbit IgG antibodies.
[0105] To analyze tyrosine phosphorylation of Clec10a, BMMP was stimulated with an HDM extract (100 μg/mL) at 37° C. for 0 min, 10 min, or 30 min. The stimulated BMMP was lysed with a 1% NP-40 lysis buffer and subjected to Immunoprecipitation with anti-Clec10a mAb. An immune precipitate was developed by SDS-PAGE and transferred onto a PVDF membrane and immunoblotted with HRP-labeled anti-phosphorylated tyrosine antibodies or anti-Clec10a antibodies and BRP-labeled anti-rabbit IgG antibodies.
[0106] To analyze association of Clec10a with Syk or SHP-1, BMMP was pretreated in the presence or absence of 5 mM Syk inhibitor IV (Merck, 574714) at 37° C. for 30 minutes and stimulated with an HDM extract (100 μg/mL) at 37° C. for 0 min, 10 min, or 30 min. BMMP was lysed with a 0.2% digitonin buffer and immunoprecipitated with anti-Clec10a mAb. An immune precipitate was transferred onto a PVDF membrane as described above and immunoblotted using anti-Syk antibodies, anti-SHP-1 antibodies, or anti-Clec10a antibodies, and then detected with HRP-labeled anti-rabbit IgG antibodies or goat IgG antibodies. All proteins were detected using enhanced chemiluminescence (Thermo Fisher Scientific).
[0107] After pretreatment at 37° C. for 16 hours in the presence or absence of peptide N-glycosidase F (PNGase F PRIM™, NZS1, N-Zyme Scientific) and thermal metamorphism at 95° C. for 5 minutes, a Clec10a ligand was pretreated at 40° C. for 16 hours in the presence or absence of 0.05 M NaOH, separated by SDS-PAGE, transferred into a PVDF membrane, and immunoblotted with biotinylated Clec10a-Fc and HRP-labeled streptavidin.
[0108] (16) Establishment and Stimulation of Reporter Cell
[0109] The intracellular region of human CD3ζ was obtained from a vector provided by LL Lanier (University of California, San Francisco). The extracellular region of mouse or human Clec10a or the extracellular region of human Asgr1 was subcloned into a pMXs-puro retroviral vector. 2B4-NFAT-GFP reporter cells were provided from H. Arase (University of Osaka). 2B4-NFAT-GFP reporter cells stably expressing mouse or human Clec10a were made as described previously. The reporter cells were incubated for 18 hours in the presence or absence of anti-Clec10a mAb, Lewis X (GlycoTech), Lewes Y (GlycoTech), galactose (Sigma-Aldrich), glucose (Sigma-Aldrich) or mannose (Sigma-Aldrich). The reporter cells were also cultured on a galactosidase (R & D Systems, 5704 GH or 5549 GH) or glucosidase (R & D Systems, 8329-GII), or Clec10 ligand-coated plate, or an HDM extract-coated plate treated with size-fractionated Clec10a ligand or untreated. Activation of NFAT-GFP was monitored by flow cytometry.
[0110] (17) Lectin Microarray Analysis
[0111] Lectin microarrays were made using a non-contact microarray printing robot (MicroSys4000; Genomic Solutions) according to the previous method. Samples were fluorescently labeled with Cy3 Mono-Reactive dye (Ge) and excess Cy3 was removed using a Sephadex g-25 desalting column (Ge). After 10 fold dilution with a probe solution (25 mM Tris-HCl, pH 7.5, 140 mM NaCl) (TBS) containing 2.7 mM KCl, 1 mM CaCl.sub.2, 1 mM MnCl.sub.2, and 1% Triton X-100, a Cy3-labeled sample was applied to a lectin microarray and incubated at 20° C. overnight. The sample was washed with a probe solution, and a fluorescence image was obtained using an evanescent-field activated fluorescence scanner (Bio-Rad scan 200, Rexxam Co. Ltd.). Lectin signals in triplicate spots were averaged for each protein sample and normalized to an average value of 96 lectins. The list of lectins was as shown in Table 2.
TABLE-US-00002 TABLE 2 Lectin used in lectin microarray Name Species
Origin Source.sup.3 Rough specificity.sup.2
1 LFA Unissex lavus Natural EYLab Sia 2 WGA Triticum vulgaris Natural EYLab (GlcNAc)n, polySia 3 PVL Psathyrella velutina Natural Wako Sia GlcNAc 4 MAL Maackia amurensis Natural Seikagaku α2-3Sia 5 MAH Maackia amurensis Natural Vector α2-3Sia 6 ACG Agrocybe cylindracea Natural JOM α2-3Sia 7 tACG Agrocybe cylindracea E. coli AIST α2-3Sia 8 tGalgN Homosapiens E. coli AIST α2-3Sia 9 SNA Sambucia nigra Natural Seikagaku α2-3Sia 10 SS4 Sambucus sieboldene Natural Vector α2-3Sia 11 TJAI Trichosanthes japorica Natural Vector α2-3Sia 12 rPSL1a Polypourus squamous E. coli AIST α2-3Sia 13 PHAL Phospoha vulgris Natural Seikagaku GlcNAc β1-6Men(Tetradenna) 14 DSA Datura stramorium Natural Seikagaku GlcNAc β1-6Men(Tetradenna) 15 Talci Tulipa generiea Natural JOM Galactosylated N-glycans up to irlantenna 16 ECA Erythrina cristagali Natural Seikagaku βGal 17 RCA120 Ridnus communis Natural Vector βGal 18 rGal7 Homosapiens E. coli AIST Type1 LacNAc, chondrolian polymer 19 rGal9N Homosapiens E. coli AIST GlcNAc α1-4GAL(A), PolyLacNAc 20 rGal9C Homosapiens E. coli AIST PolyLacNAc, BranchedLacNAc 21 tC14 Gallus grillus domesticus E. coli AIST BranchedLacNAc 22 rDiscoidin II Diclyostellura dicodues E. coli AIST LacNAc, Gal β1-3GalNAclT, GALNAc(Tn) 23 BPL Buchinta pur puraealbe Natural Vector Gal β1-3GlcNAc(GalNAc), α/βGalHAc 24 rCGL2 Homosapiens E. coli AIST GlcNAc α1-3Gal(a), PolyLacNAc 25 PHAE Phaseolus vulgaris Natural Vector bisecting GlcNAc 26 GSLI Griffonia shamplicifola Natural Vector GlcNAc β1-cNan 27 rSRL Sclerctium rolfado E. coli AIST Core1,3, agalacto N-glycan 28 UDA Urika dioica Natural Vector (GlcNAc)n 29 PWM Phytolacca americana Natural Vector (GlcNAc)n 30 rF17AG Escherichia coli E. coli AIST GlcNAc 31 rGRFT Griffithia sp. E. coli AIST Man 32 NPA Narcissus pseudonardssus Natural Seikagaku Mana1-3Man 33 ConA Canvaldia onsiloimia Natural Vector M3,Man α1-2Mana1-3(Manα1-0)Man, GlcNAc β1-2Mana1-3(Manα1-0)Man 34 GNA Galanthius rivalis Natural Vector Mana1-3Man, Man α1-αMan 35 HHL Hippestrums hybrid Natural Vector Mana1-3Man, Man α1-αMan 36 ASA Allium sativum Natural JOM Gal β1-4GlcNAc β1-2Man 37 DBN Dioscora batates Natural JOM High-man 38 CCA Castarea crenata Natural JOM Galactoxylated N-glycans upto trianbarna 39 Hultuba Helianthus tubercaus Natural JOM Mana1-3Man 40 tHeltuba Helianthus tubercaus E. coli AIST Mana1-3Man 41 ADA Allonyrira dichloma Natural JOM α2-6Sia Forsman A, B 42 WAII Yicia villosa Natural JOM Man, Agalacto 43 rOrysata Oryza sativa E. coli AIST Manα1-3Man, Highman, blantenna 44 rPALa Milebodium aureum E. coli AIST Man5, biantennas 45 rBanana Muso acumbriata E. coli AIST Manα1-2Man α1-3(0)Man 46 rCelsepa Calystegia septum E. coli AIST Brantenna with bisectiong GlcNAc 47 rRSL Raistonia solanaconum E. coli AIST αMan, α1-2Fuc(H), α1-3Fuc(Lex), α1-Fuc(Lex) 48 iBC2LA Burkholderia canocepada E. coli AIST αMan, High-man 49 AOL Aspergillus cryzau Natural Vector α1-2Fuc(H), α1-3Fuc(Lex), α1-3Fuc(Lex) 50 AAL Alaria aurantia Natural Vector α1-2Fuc(H), α1-3Fuc(Lex), α1-4Fuc(Lex) 51 rAAL Aleura aurantia E. coli AIST α1-2Fuc(H), α1-3Fuc(Lex), α1-3Fuc(Lex) 52 rPAML Pseudomonas aeruginosa E. coli AIST αMan, α1-2Fuc(H), α1-3Fuc(Lex), α1-Fuc(Lex) 53 rPSML Ralstoria solarusuorcum E. coli AIST α1-2Fuc(H), α1-3Fuc(Lex), α1-3Fuc(Lex) 54 rPTL Pholiota lerresiria E. coli AIST α1-6Fuc 55 PSA Pisum sativum Natural Seikagaku α1-6Fuc up to biantenna 56 LCA Lens culinaris Natural Vector α1-6Fuc up to biantenna 57 rAOL Aspergillus cryzae E. coli AIST α1-2Fuc(H), α1-3Fuc(Lex), α1-3Fuc(Lex) 58 rBC2LCN Burkholderia conocepacia E. coli AIST Fuc α1-2Gal β1-3GlcNAc(GalNAc) 59 LTL Lotus teiragonoiobus Natural Seikagaku Lex, Ley 60 UEAI Olex europacus Natural Vector α1-2Fuc 61 TJAII Trichosanthes japonica Natural Vector α1-2Fuc 62 MCA Monosorelica charantia Natural JOM α1-2Fuc 63 GSU Griffonta simplicofolia Natural Seikagaku αGalNAc(A, Tn), αGal(B) 64 PTU Psophocarpus tetragonolobus Natural Tokyo Kasai αGalNAc(A, Tn) 65 GSUA4 Griffonta simplicofolia Natural EYLab αGalNAc(A, Tn) 66 rGC2 Geodia cyclonium E. coli AIST α1-2Fuc(H), αGalNAc(A), αGal(B) 67 GSUB4 Griffonia simplecifolta Natural Vector αGal(B) 68 rMOA Marasralus orgades E. coli AIST αGal(B) 69 EEL Euonymus europecus Natural Vector αGal(B) 70 rPAIL Pseudomona auruginosa E. coli AIST α,βGal, αGalNAc(Tn) 71 LEE Lycopersicon asculentum Natural Vector Polyactosamine, (GlcNAc)n 72 STL Solanum tuberosum Natural Seikagaku Polyactosamine, (GlcNAc)n 73 rGal3C Homosapiens E. coli AIST LacNAc, polyactosamine 74 rLSLN Lactiporus sulphureus E. coli AIST LacNAc, polyactosamine 75 rCGL3 Coprinopsis cinerea E. coli AIST LacDiNAc 76 PNA Arachis hypogaea Natural Vector Gal β1-3GalNAc(T) 77 ACA Amaranthus caudaius Natural Vector Gal β1-3GalNAc(T) 78 HEA Hericum orinacem Natural JOM Gal β1-3GalNAc(T) 79 ABA Agarics bisporus Natural Vector Gal β1-3GalNAc(T), GlcNAc 80 Jacalin Arlocarpus integrifolia Natural Seikagaku Gal β1-3GalNAc(T), GlcNAc α(Tn) 81 MPA Maclura pomilera Natural Seikagaku Gal β1-3GalNAc(T), GlcNAc α(Tn) 82 HPA Helix pomatia Natural Seikagaku αGalNAc(A, Tn) 83 WA Vicia villosa Natural Vector α,βGalNAc (A, Tn, LacDiNAc) 84 DBA Dolichos billorus Natural Vector α,βGalNAc (A, Tn, LacDiNAc) 85 SBA Glycine ruex Natural EYLab α,βGalNAc (A, Tn, LacDiNAc) 86 rPPL Pieurocybella porrigens E. coli AIST α,βGalNAc (A, Tn, LacDiNAc) 87 rCNL Clitacybe nebularis E. coli AIST α,βGalNAc (A, Tn, LacDiNAc) 88 rXCL Xerocomus chrysenieron E. coli AIST Core1,3 agalacto N-glycan 89 WA I Vicia villosa Natural JOM GalNAc β1-3(4)Gal 90 WFA Wisteria loribunda Natural Vector Teraninal GalNac, LacDiNAc 91 rABA Agerics bisporus E. coli AIST Gal β1-3GalNac(T), GlcNAc 92 rDiscoidinl Dictyostellums Discodeum E. coli AIST Gel 93 DBAIII Diescoreabatatas Natural JOM Maltosa 94 rMalectin Homosapiens E. coli AIST Glcα1-2Glc 95 CSA Oncerhyenchus leta Natural JOM Ruminose,Gal α1-4Gal 96 FLAG-FW29Ch-E20K Lumbilicus terrestris E. coli AIST G-sulfo-Gal Abbreviations: Gal (D-galactose), GalNAc (N-acetyl-galactosamine), GlcNAc (N-acetyl-glucosamine), Fuc (L-fucose), Sia (Sialic acid), and LacNAc (N-acetyl-lactosamine). .sup.2Specific data was obtained by frontal affinity chromatography and sugar conjugate microarrays. .sup.3Abbreviations: JOM (J-OIL MILLS, INC), Vector (VECTOR LABORATORIES), Seikagaku (SEIKAGAKU CORPORATION), EY (EY LABORATORIES, INC), and AIST (Nationα1 Institute of Advanced Industriα1 Science and Technology)
indicates data missing or illegible when filed
[0112] (18) Sugar Conjugate Microarray Analysis
[0113] A sugar conjugate microarray containing 98 sugar conjugates (Table 3) was prepared according to a known method using a non-contact microarray printing robot (MicroSys 4000; Genomic Solutions). Clec10a-Fc (10 μg/mL) was pre-complexed with Cy3-labeled goat anti-human IgG, Fc (Jackson, 109-165-098) (1 μg/mL) in advance and incubated with sugar conjugate microarrays (80 μL/well) overnight at 20° C.
TABLE-US-00003 TABLE 3 Glycan used in sugar conjugate microarray Trivial name Presentation Glycans Source Cat# αFuc PAA Fuc α1-PAA Glycotech 01-007 Fuc α2Gal PAA Fuc α1-2Gal β1-PAA Glycotech 01-019 Fuc α3GlcNAc PAA Fuc α1-3GlcNAc β1-PAA Glycotech 01-024 Fuc α4GlcNAc PAA Fuc α1-4GlcNAc β1-PAA Glycotech 01-025 H type1 PAA Fuc α1-2Gal β1-3GlcNAc β1-PAA Glycotech 01-037 H type2 PAA Fuc α1-2Gal β1-4GlcNAc β1-PAA Glycotech 08-034 H type3 PAA Fuc α1-2Gal β1-3GalNAc α1-PAA Glycotech 08-060 A PAA GalNAc α1-3(Fuc α1-2)Gal β1-4GlcNAc β1-PAA Glycotech 08-091 B PAA Gal α1-3(Fuc α1-2)Gal β1-4GlcNAc β1-PAA Glycotech 08-092 Le.sup.a PAA Gal β1-3(Fuc α1-4)GlcNAc β1-PAA Glycotech 01-035 (3S)Le .sup.a PAA (3OSO .sub.3)Gal β1-3(Fuc α1-4)GlcNAc β1-PAA Glycotech 01-040 Le.sup.b PAA Fuc α1-2Gal β1-3(Fuc α1-4)GlcNAc β1-PAA Glycotech 08-042 Le.sup.x PAA Gal β1-4(Fuc α1-3)GlcNAc β1-PAA Glycotech 01-036 Le.sup.y PAA Fuc α1-2Gal β1-4(Fuc α1-3)GlcNAc β1-PAA Glycotech 08-043 αNeu5Ac PAA Neu5Ac α2-PAA Glycotech 01-012 αNeu5Gc PAA Neu5Gc α2-PAA Glycotech 01-051 Sia2 PAA Neu5Ac α2-8Neu5Ac α2-PAA Glycotech 08-064 Sia3 PAA Neu5Ac α2-8Neu5Ac α2-8Neu5Ac α2-PAA Glycotech 01-081 3'SiaLe .sup.c PAA Neu5Ac α2-3Gal β1-3GlcNAc β1-PAA Glycotech 01-078 3'SL PAA Neu5Ac α2,3Gal β1-4Glc β1-PAA Glycotech 01-038 3'SLN PAA Neu5Ac α2-3Gal β1-4GlcNAc β1-PAA Glycotech 01-077 sLe .sup.a PAA Neu5Ac α2-3Gal β1-3(Fuc α1-4)GlcNAc β1-PAA Glycotech 08-044 sLe .sup.a PAA Neu5Ac α2-3Gal β1-4(Fuc α1-3)GlcNAc β1-PAA Glycotech 01-045 6'SL PAA Neu5Ac α2-6Gal β1-4Glc β1-PAA Glycotech 01-039 βGal PAA Gal β1-PAA Glycotech 01-004 [3S] βGal PAA (3OSO .sub.3)Gal β1-PAA Glycotech 01-015 A-dl PAA GalNAc α1-3Gal β1-PAA Glycotech 01-017 Lac PAA Gal β1-4Glc β1-PAA Glycotech 01-021 Le.sup.c PAA Gal β1-3GlcNAc β1-PAA Glycotech 01-020 [3'S]Le .sup.c PAA (3OSO .sub.3)Gal β1-3GlcNAc β1-PAA Glycotech 01-062 LN PAA Gal B1-4GlcNAc β1-PAA Glycotech 01-022 [3'S]LN PAA (3OSO .sub.3)Gal β1-4GlcNAc β1-PAA Glycotech 01-061 [6S]LN PAA Gal β1-4(6OSO .sub.3)GlcNAc β1-PAA Glycotech 01-066 [6'S]LN PAA (6OSO .sub.3)Gal β1-4GlcNAc β1-PAA Glycotech 01-068 βGalNAc PAA Gal NAc β1-PAA Glycotech 01-011 di-GalNAc β PAA GalNAc β1-3GalNAc β1-PAA Glycotech 01-070 LDN PAA GalNAc β1-4GlcNAc β1-PAA Glycotech 01-057 GA2 PAA GalNAc β1-4Gal β1-4Glc β1-PAA Glycotech 08-074 βGlcNAc PAA GlcNAc β1-PAA Glycotech 01-009 [6S] βGlcNAc PAA (6OSO .sub.3)GlcNAc β1-PAA Glycotech 01-016 αMan PAA Manα1-PAA Glycotech 01-005 βMan PAA Manβ1-PAA Glycotech 01-050 [6P]Man PAA (6OPO .sub.4)Manα1-PAA Glycotech 01-006 Tn PAA GalNAc α1-PAA Glycotech 01-010 Core1 PAA Gal β1-3GalNAc α1-PAA Glycotech 08-023 Core2 PAA Gal β1-3(GlcNAc β1-6)GalNAc α1-PAA Glycotech 01-083 Core3 PAA GlcNAc β1-3GalNAc α1-PAA Glycotech 01-071 Core4 PAA GlcNAc β1-3(GlcNAc β1-6)GalNAc α1-PAA Glycotech 01-089 Forssman PAA GalNAc α1-3GalNAc β1-PAA Glycotech 01-026 Core6 PAA GlcNAc β1-6GalNAc α1-PAA Glycotech 01-072 Core8 PAA Gal α1-3GalNAc α1-PAA Glycotech 01-028 [3'S]Core1 PAA (3OSO .sub.3)Gal β1-3GalNAc α1-PAA Glycotech 08-069 Gal β-Core3 PAA Gal β1-4GlcNAc β1-3GalNAc α1-PAA Glycotech 01-116 STn PAA Neu5Ac α2-6GalNAc α1-PAA Glycotech 01-059 STn (Gc) PAA Neu5Gc α2-6GalNAc α1-PAA Glycotech 01-107 ST PAA Neu5Ac α2-3Gal β1-3GalNAc α1-PAA Glycotech 01-088 Sla α2-6Core1 PAA Gal β1-3(Neu5Ac α2-6)GalNAc α1-PAA Glycotech 01-113 αGal PAA Gal α1-PAA Glycotech 01-003 Gal α1-2Gal PAA Gal α1-2Gal β1-PAA Glycotech 01-056 Gal α1-3Gal PAA Gal α1-3Gal β1-PAA Glycotech 01-018 Gal α1-3Lac PAA Gal α1-3Gal β1-4Glc β1-PAA Glycotech 01-075 Gal α1-LN PAA Gal α1-3Gal β1-4GlcNAc β1-PAA Glycotech 01-079 Gal α1-4LN PAA Gal α1-4Gal β1-4GlcNAc β1-PAA Glycotech 01-110 Melibiose PAA Gal α1-6Glc β1-PAA Glycotech 01-063 αGlc PAA Glc α1-PAA Glycotech 01-001 βGlc PAA Glc β1-PAA Glycotech 01-002 Maltose PAA Glc α1-4Glc β1-PAA Glycotech 01-054 αRha PAA Rhamnose α1-PAA Glycotech 01-008 Chitobiose PAA GlcNAc β1-4GlcNAc β1-PAA Glycotech 08-057 Negative PAA PAA — Glycotech 01-000
[0114] (19) Knock Down of Human Asgr1
[0115] CD14.sup.+ monocytes were concentrated from peripheral blood mononuclear cells using anti CD14 microbeads (Miltenyi Biotec, 130-050-201) and cultured in the presence of GM-CSF for 2 days. The monocytes were treated with siRNA specific for ASGR1 (SMARTpool Accell siRNA, Dharmacon) or a mixture of control siRNA and siRNA delivery agents. The monocytes were then stimulated with 100 μg/mL HDM extract for 6 hours. Concentrations of various cytokines in culture supernatants were determined using cytometric bead array analysis (BD Biosciences).
[0116] (20) Human Skin Gene Expression Data
[0117] Published microarray data (GSE5667) was used to analyze the expression of human ASGR1 in the pathologic state of human skin and atopic dermatitis.
[0118] (21) Statistical Analysis
[0119] Statistical analysis was performed using two-sided Student's t-test (GraphPad Prism 5), post-hoc Tukey-Kramer test and ANOVA test (GraphPad Prism 5), or Pearson correlation test (two-sided, GraphPad Prism 5).
Example 1
Exome Analysis of Atopic Dermatitis Model Mouse
[0120] In this example, exome analysis of NC/Nga mice as model mice of atopic dermatitis was performed to identify causative genes of atopic dermatitis.
[0121] The NC/Nga mice were purchased from Charles River, Japan. DNA was extracted from blood from the NC/Nga mice under conditions suitable for extraction of mouse DNA using QIAamp DNA blood Mini Kit (Qiagen, Venlo, Netherlands). The exome analysis of the resulting DNA was performed as follows. DNA libraries were obtained using SureSelect Library prep kit (post-pool version 4; Agilent Technologies, Santa Clara, Calif.) and SureSelect Mouse All Exon Kit (Agilent Technologies) according to the manufacturer's manual. The resulting DNA libraries were subjected to emulsion PCR (SOLiD EZ Bead Emulsifier kit; Thermo Fisher Scientific, Waltham, Mass.) to generate clonal DNA fragments on beads, which were then subjected to bead enrichment (SOLiD EZ Bead Enrichment kit; Thermo Fisher Scientific, Waltham, Mass.). The resulting beads were sequenced on a SOLiD 5500xl sequencer as single end 60-bp reads. The resulting read were aligned with the mouse reference genome (NCBI37/mm9) using LifeScope version 2.5.1 (Life Sciences) to obtain a BAM file. Variant calls were performed using SAMtool according to the protocol described in Genome Analysis Toolkit, Picard (http://broadinstitute.github.io/picard), and only reads mapped to unique locations on the reference genome were used for analysis. Mutations were annotated using the ANNOVER software. Genetic variation in inbred mice other than NC/Nga was obtained from Release REL-1211 numbered according to the NCBIm 37 assembly (http://www.sanger.ac.uk/science/data/mouse-genomes-project) and Mouse Genome Informatics website (http://www.informatics.jax.org/). Sequencing was performed on an ABI 3130xl Genetic Analyzer (Thermo Fisher Scientific) using BigDye Terminator v1.1 Cycle Sequencing Kit (Thermo Fisher Scientific). The primers used were as shown in Table 4.
TABLE-US-00004 TABLE 4 Primer used for confirmation of nonsense mutation or frameshift mutation in NC/Nga mouse by Sanger sequencing Gene Primer sequence Cdh20 Forward TCGGACTCAGAGCAGAGCTT Reverse CTCTGCTGGGTOCACTCACT Tlr5 Forward GCCATTCTTCCTTGAACCAC Reverse ATGGCCGTGTGGGAGTATAA Tmem141 Forward GATCAGGGACTCCAAAACCA Reverse TGCTGAGGTAGGAGGGACTG Qsox2 Forward AGACTCAGCCACGTGAACCT Reverse TCGGGCTCAGACATTTCACT Hc Forward TCGTGTTTTTAAATATTTTGCTTCC Reverse CCCCACCCTCTTCTGGTACT Tdpoz2 Forward GGTGGAAGTCAATGGTGGAG Reverse TTGTCTCTGGGACTCAAAGGA Gm572 Forward GTTTCGGCGCTTTTGTTTTA Reverse CTTCAGAGGCCAGGACAAAG Cyp3a57 Forward TGATGTTCTTCTTTGACCTTCC Reverse TCCCTCTCTGAGTACCATCCA Try4 Forward GAGGGCTCCACCTAACAACA Reverse GTACAGACAGGGCCCATCAC Klri2 Forward TGATGAGCACTCATTTCACACA Reverse TCCCAGTGCCAACAGTTACA Kira7 Forward AAAGTTAAAGAGTTGCCCCTTG Reverse TGAATTATTGCAGGAAACAAATG Ttc23 Forward GAACTGCTCTAACGCTGTGG Reverse ACAGTGCCATCCAGGGTTC Olfml1 Forward GGGCATTCATGGAAGATAGC Reverse CATCCACAGCAAGGTCAATG Foxr1 Forward CGCAGTTTCCCCTTCTCAT Reverse TGGAGGTACAAGGTTCTGTGC Cilp Forward AAGAGCAATGTGGGAGTTGC Reverse AGCATCATGAGGCAGAGACA Slc22a21 Forward GCTTGTTTTGCAACTGATGG Reverse AGCACTGTTGTCGGTCACTG Clec10a Forward TGAGGGAGAGGTAACCATGC Reverse GGGCAAATGTACAGCACACA Serpina3i Forward GCTGTCAGGACTCAGCAGTG Reverse GGTCAGGGAGAATGAACAGG Zkscan4 Forward AATCCACACGGGTGAGAAAC Reverse CAGTGTGTATTGGCCACACC Zfp057 Forward TGCAGAGCAAAGTCAAGGTT Reverse CTTAGCGGCTGCGTTTTT Timm8a2 Forward CATCCACCACATGACAGAGC Reverse GTCCATTTCCCCACCTACCT Pdzd2 Forward ATGCATGCTCGCTTTTTCTT Reverse GAGGGATGGGGGAAGAGTTA Cyp2d11 Forward AGGCAGAGTCCAACAGGAAA Reverse CCTACCTTGGTGACGAGGAA Kcnk7 Forward CCCCAGCCTCAGTATCAGAA Reverse ATTTAGCCCAGAGTCGCTTG
[0122] In the exon region of the genome of the NC/Nga mice, 70772 mutations were identified relative to the reference genome. The mutations with low quality values obtained from the GATK output were removed and 64518 mutations were obtained. Loss of function mutations, including nonsense mutation and frameshift mutation, were selected using the ANNOVER software. Thirty five (35) nonsense mutations and 48 frameshift mutations (induction of stop codons) were then identified. For each of these 83 genes, 46 mutations in 43 genes were selected for further sequence validation.
[0123] Of the 46 mutations, 24 mutations were confirmed by sequencing. The results were as shown in Table 5.
TABLE-US-00005 TABLE 5 Nonsense mutation and frameshift mutation in NC/Nga mouse confirmed by Sanger sequencing Mutations of 7 genes specifically present in NC/Nga mice are indicated in bold. “Last Exon” means that a mutation is located in the last exon of the corresponding transcript. Rs262301704 corresponds to c, 1157_1158insCCCA and a mouse with rs262301704 is indicated by*.
indicates data missing or illegible when filed
[0124] Mutations present in 17 inbred mouse lines and two Japanese pet mice were excluded, and seven mutations in seven genes were noted. (See the bold in Table 5). From the perspective of expression in hematopoietic cells, Clec10a was selected from the seven genes based on BioGPS database information (see panel a in
Example 2
Clec10a Expression Analysis and Functional Analysis
[0125] Clec10a is a member of the type II C-type lectin receptor family and detects galactose moieties at terminals of foreign and endogenous antigens. c.706C>T of Clec10a in the NC/Nga mice is present in the coding region of the C-type lectin-like domain (
[0126] The characteristics of Clec10a expression in the NC/Nga mice were further analyzed. Specifically, cDNA from Clec10a (from C57BL/6J and NC/Nga mice) with a Flag tag at the 3′end and a sequence encoding IRES-GFP was transfected into RAW264.7 macrophages. The Flag tag was expressed on the cell surface of the macrophages expressing Clec10a derived from the C57BL/6J mice, but not on the cell surface of macrophages expressing Clec10a from the NC/Nga mice. (See panel f in
[0127] This Clec10a mutation was then checked whether it is involved in dermatitis due to house dust mites (HDMs). Thus, instead of a native sequence (Clec10a.sup.c.706T), a mutant mouse with Clec10a.sup.c.706C (hereafter, sometimes referred to as “NC/Nga mouse Clec10a.sup.c.706T>C”) was made according to a routine method using a CRISPR/Cas9 system (see panel a in
[0128] To investigate the involvement of cell surface expression of Clec10a in HDM-induced dermatitis, Clec10a-deficient mice (Clec10a.sup.−/− mice) were made using C57BL/6J mice as a background. HDM was applied topically to the dorsal skin of the wild type C57BL/6J mice and the Clec10a-deficient mice (Clec10a.sup.−/−). As observed in the skin of the NC/Nga mice, the Clec10a−/− mice showed exacerbations of dermatitis, such as erythema, dryness and skin enhancement on Days 5 to 6 after the HDM treatment, as compared with the wild type mice (see panels a to d in
[0129] At two weeks after the HDM treatment, the serum IgG1 level was higher in the Clec10a−/− mice than in the wild type, and the IgE and IgG2c values were comparable between the wild type and the Clec10a−/− mice (see panel b in
[0130] Since Clec10a was expressed in MHCII.sup.+ macrophages (MPs) and dendritic cells (DCs) of the skin, these cells were sorted from skin cell samples of topically-HDM-treated wild type and Clec10a−/− mice (see panel a in
[0131] HDM stimulation caused activation of spleen tyrosine kinase (Syk) in the wild type BMMP, but no activation of Syk was observed in the Clec10a−/− BMMP (see panel j in
Example 3
Analysis of Clec10a Ligand
[0132] To test whether Clec10a recognized glycosylated proteins contained in HDM, NFAT-GFP reporter cells (Clec10a reporter cells) were made which expressed chimeric fusion proteins inch ling an extracellular and transmembrane portions of Clec10a fused to a cytoplasmic portion of CD3. Mouse Clec10a reporter cells expressed GFP in response to Lewis X (Clec10a oligosaccharide ligand) but did not respond to Lewis Y (see panels a and b in
[0133] For analysis of the Clec10a ligand (Clec10a-L) in HDM, chimeric fusion proteins including an extracellular portion (Clec10a-Fe) of mouse Clec10a fused to the Fc portion of human IgG1 were made, but the fusion proteins were not bound to Lewis Y but were bound to Lewis X (panel c in
TABLE-US-00006 TABLE 6 Lectin microarray analysis of Clec10a ligand in HDM Signal value Rank Latin Rough specificity Target.sup.1 Control1.sup.2 Control2.sup.3 1 MPA Galβ1-3GalNAc (T), αGalNAc (Tn) 20283 0 0 2 BPL Galβ1-3GalNAc (T), terminal GalNAc 19440 0 0 3 WFA Terminal GalNAc, LacDiNAc 18081 0 0 4 rSRL Galβ1-3GalNAc (T), GlcNAcβ1-3GalNAc, agalaoto N-glycan 17794 0 0 5 rABA Galβ1-3GalNAc (T), GlcNAc 17018 0 0 6 rXCL Galβ1-3GalNAc (T), GlcNAcβ1-36GalNAc, αGalacto N-glycan 16918 0 0 7 rCNL Terminal GalNAc (A, Tn, LacDiNAc) 16900 0 0 8 Jacalin Galβ1-3GalNAc (T), αGalNAc (Tn) 15697 0 0 9 UDA (GlcNAc)n 15228 0 0 10 rGC2 α1-2Fuc (H), αGalNAc (A), αGal (B) 15049 0 0 11 RCA120 βGal 14050 0 0 12 rPBL1a α2-6Sia 13311 0 0 13 SBA α,βGalNAc (A, Tn, LacDiNAc) 12337 0 0 14 ABA Galβ1-3GalNAc (T), GlcNAc 11636 0 0 15 rCGL2 GalNAcα1-3Gal (A) PolyLacNAc 10999 1370 0 16 PNA Galβ1-3GalNAc (T) 10699 0 0 17 TJAJI α1-2Fuc 10518 0 0 18 WA1 GalNAcβ1-3(4)Gal 10377 0 0 19 HEA Galβ1-3GalNAc (T) 9938 0 0 20 rGal9N GalNAcα1-4Gal (A), PolLacNAc 9093 0 0 21 rL8LN LacNAc, polylactosamine 8962 0 0 22 MCA α1-2Fuc 8239 0 0 23 ACA Galβ1-3GalNAc (T) 8057 0 0 24 rGal9C PolyLacNAc, Branched LacNAc 7990 0 0 25 rAAL α1-2Fuc (H), α1-3Fuc (Lex), α1-3Fuc (Lea) 7764 0 0 26 AAL α1-2Fuc (H), α1-3Fuc (Lex), α1-4Fuc (Lea) 7508 0 0 27 WA α,βGalNAc (A, Tn, LacDiNAc) 6765 0 0 28 rACG α2-3Sia 6442 0 0 29 rBC2LCN Fuc α1-2Galβ1-3GlcNAc (GalNAc) 5909 0 0 30 HPA αGalNAc (A, Tn) 5471 0 0 31 GNA Manα1-3Man, Manα1-6Man 4458 0 0 32 NPA Manα1-3Man 3993 0 0 33 ECA βGal 3871 0 0 34 DBAI High-man 3793 0 0 35 rBC2LA αMan, High-man 3766 0 0 36 PVL Sia, GlcNAc 3729 0 0 37 rRSIIL α1-2Fuc (H), α1-3Fuc (Lex), α1-3Fuc (Lea) 3678 0 0 38 rMOA αGal (B) 3658 0 0 39 rGRFT Man 3502 0 0 40 rAOL α1-2Fuc (H), α1-3Fuc (Lex), α1-3Fuc (Lea) 3194 0 0 41 CCA Galactosylated N-glycana up to trianianna 3093 0 0 42 LEL Polylactosamine, (GlcNAc)n 3054 0 0 43 STI. Polylactosamine, (GlcNAc)n 2611 0 0 44 rPPL α,βGalNAc (A, Tn, LacDiNAc) 2579 0 0 45 rPALa Man5, blantenna
2493 0 0 46 GSLIA4 αGalNAc (A, Tn) 2181 0 0 47 HHL Manα1-3Man, Manα1-7Man 1731 0 0 48 rDiscoidin H LacNAc, Galβ1-3GalNAc (T), GalNAc (Tn) 1306 0 0 49 DSA GlcNAcβ1-6Man (Tetraantenna)
1095 0 0 50 SSA α2-6Sia 1013 0 0 .sup.1Target: Pull-down assay sample from HDM using Clec10a-Fc .sup.2Control 1: Pull-down assay sample from buffer using Clec10a-Fc .sup.3Control 2: Pull-down assay sample from HDM using human IgG1
indicates data missing or illegible when filed
[0134] Clec10a was most strongly bound to the lectins of Maclura pomifera (MPA) recognizing high density of multivalent T and Tn antigens. On the other hand, analysis by glycan microarray revealed that Clec10a-Fc binds to T and Tn antigens (see Table 7) and suggested that Clec10a-L is a mucin-like protein (see panel k in
TABLE-US-00007 TABLE 7 Analysis of Clec10a-Fc by glycan microarray Signal value human Clec10a-Fc Rank Glycan Structure Clec10a-Fc IgG1 with EDTA 1 αGal Galα1 11934 0 0 2 Lea Galβ1-3(Fucα1-4)GlcNAcβ1 5532 0 0 3 Lao Galβ1-4Glcβ1 4850 0 0 4 Core2 Galβ1-3(GlcNAcβ1-6)GalNAcα1 4824 0 0 5 Galα1-3LN Galα1-3Galβ1-4GlcNAcβ1 4342 0 0 6 Lex Galβ1-4(Fucα1-3)GlcNAcβ1 2535 0 0 7 T (Core1) Galβ1-3GalNAcα1 2504 0 0 8 Leo Galβ1-3GlcNAcβ1 2414 0 0 9 βGal Galβ1 1867 0 0 10 Galα1-4LN Galα1-4Galβ1-4GlcNAcβ1 1679 0 0 11 A-di GalNAcα1-3Galβ1 1137 0 0 12 Tn GalNAcα1 682 0 0 13 Galα1-3Lac Galα1-3Galβ1-4Glcβ1 444 0 0 14 Galα1-3Gal Galα1-3Galβ1 144 0 0 15 dl-GalNAcβ GalNAcβ1-3GalNAcβ1 65 0 0 16 Melibiose Galα1-3Glcβ1 45 0 0 17 Sia3 Neu5Acα2-8Neu5Acα2-8Neu5Acα2 19 0 3 18 3'SLN Neu5Acα2-3Galβ1-4GlcNAcβ1 7 0 0 18 LN Galβ1-4GlcNAcβ1 7 0 0 20 βGalNAc GalNAcβ1 6 0 0 21 3'SL Neu5Acα2-Galβ1-4Glcβ1 5 0 0 22 3'SiaLec Neu5Acα2-3Galβ1-3GlcNAcβ1 4 0 0 23 αFuc Fucα1 3 0 0 23 [3S]βGal (3OSO3)Galβ1 3 0 0 23 Galα1-2Gal Galα1-2Galβ1 3 0 0 26 H type1 Fucα1-2Galβ1-3GlcNAcβ1 1 0 0 26 sLex Neu5Acα2-3Galβ1-4(Fucα1-3)GlcNAcβ1 1 0 0 26 6'SL Neu5Acα2-6Galβ1-4Glcβ1 1 0 0 26 STn Neu5Acα2-6GalNAcα1 1 0 0 30 Fucα2Gal Fucα1-2Galβ1 0 0 0 30 Fucα3GlcNAc Fucα1-3GlcNAcβ1 0 0 0 30 Fucα4GlcNAc Fucα1-4GlcNAcβ1 0 0 0 30 H type2 Fucα1-2Galβ1-4GlcNAcβ1 6 0 0 30 H type3 Fucα1-2Galβ1-3GalNAcα1 0 0 0 30 A GalNAcα1-3(Fucα1-2)Galβ1-4GlcNAcβ1 0 0 0 30 B Galα1-3(Fucα1-2)Galβ1-4GlcNAcβ1 0 0 0 30 (3S)Lea (3OSO3)Galβ1-3(Fucα1-4)GlcNAcβ1 0 0 0 30 Leb Fucα1-2Galβ1-3(Fucα1-4)GlcNAcβ1 0 0 0 30 Ley Fucα1-2Galβ1-4(Fucα1-3)GlcNAcβ1 0 0 0 30 αNeu5Ac Neu5Acα2 0 0 0 30 αNeu5Gc Neu5Gcα2 0 0 0 30 Sia2 Neu5Acα2-8Neu5Acα2 0 0 0 30 sLea Neu5Acα2-3Galβ1-3(Fucα1-4)GlcNAcβ1 0 0 0 30 (3'S)Lec (3OSO3)Galβ1-3GlcNAcβ1 0 0 0 30 (3'S)LN (3OSO3)Galβ1-4GlcNAcβ1 0 0 0 30 (6'S)LN Galβ1-4(6OSO3)GlcNAcβ1 0 0 0 30 (6'S)LN (6OSO3)Galβ1-4GlcNAcβ1 0 0 0 30 LON GalNAcβ1-4GlcNAcβ1 0 0 0 30 Ga2 GalNAcβ1-4Galβ1-4Glcβ1 0 0 0 30 βGlcNAc GlcNAcβ1 0 205 0 30 (6S)βGlcNAc (6OSO3)GlcNAcβ1 0 318 0 30 αMan Manα1 0 0 0 30 βMan Manβ1 0 0 0 30 (6P)Man (6OPO4)Manα1 0 0 0 30 Core3 GlcNAcβ1-3GalAcα1 0 0 0 30 Core4 GlcNAcβ1-3(GlcNAcβ1-6)GalNAcα1 0 0 0 30 Forssman disaccharide GalNAcα1-3GalNAcβ1 0 0 0 30 Core6 GlcNAcβ1-6GalNAcα1 0 0 0 30 Core8 Galα1-3GalNAcα1 0 0 0 30 (3'S)Core1 (3OSO3)Galβ1-3GalNAcα1 0 0 0 30 Galβ-Core3 Galβ1-GlcNAcβ1-3GalNAcα1 0 0 0 30 STn (Gc) Neu5Gcα2-6GalNAcα1 0 0 0 30 ST Neu5Acα2-3Galβ1-3GalNAcα1 0 0 0 30 Siaα2-6Core 1 Galβ1-3(Neu5Acα2-6)GalNAcα1 0 0 0 30 αGlc Glcα1 0 0 0 30 βGlc Glcβ1 0 0 0 30 Maltose Glcα1-4Glcβ1 0 0 1 30 αRha Rhamnoseα1 0 0 0 30 Chitobiose GlcNAcβ1-4GlcNAcβ1 0 0 0 30 Negative PAA — 0 0 0 51 TxLcl Galactosylated N-glycans up to triantenna 973 0 0 52 rDisoaidin I Gal 737 0 0 53 rCalsepa Biantenna with bisecting GlcNAc 651 0 0 54 rGal3C LacNAc, polylactosamine 630 0 0 55 WGA (GlcNAc)n, polySia 624 0 0 56 PSA α1-6Fuc up to biantenna 481 0 0 57 AOL α1-2Fuc (H), α1-3Fuc (Lex), α1-3Fuc (Lea) 309 0 0 58 LCA α1-6Fuc up to biantenna 228 0 0 59 rPAIIL αMan, α1-2Fuc (H), α1-3Fuc (Lex), α1-4Fuc (Lea) 131 0 0 60 TJAI α2-6Sia 113 0 0 61 rBanana Manα1-2Mana1-3(6)Man 10 0 0 62 ASA Galβ1-4GlcNAcβ1-2Man 2 0 0 62 rCGL3 LacDiNAc 2 0 0 64 LFA Sia 0 0 0 64 MAL α2-3Sia 0 0 0 64 MAH α2-3Sia 0 0 0 64 ACG α2-3Sia 0 0 0 64 rGal8N α2-3Sia 0 0 0 64 SNA α2-3Sia 0 0 0 64 ADA α2-6Sia, Forssman, A, B 0 0 0 64 PHAL GlcNAcβ1-6Man (Tetraantenna) 0 0 0 64 rGal7 Type 1 LacNAc, chondroitin
polymer 0 0 0 64 rC14 Branched LacNAc 0 0 0 64 PHAE bisecting GlcNAc 0 0 0 64 GSLII GlcNAcβ1-4Man 0 0 0 64 PWM (GlcNAc)n 0 0 0 64 rF17AG GlcNAc 0 0 0 64 ConA M3, Manα1-2Manα1-3(Manα1-6)Man, 0 0 0 GlcNAcβ1-2Manα1-3(Manα1-6)Man 64 Heltuba Manα1-3Man 0 0 0 64 rHeltuba Manα1-3Man 0 0 0 64 WAJI Man, agalacto 0 0 0 64 rOryaaia Manα1-3Man, Highman, biantenna 0 0 0 64 rRSL αMan, α1-2Fuc (H), α1-3Fuc (Lex), α1-4Fuc (Lea) 0 0 0 64 rPTL α1-6Fuc 0 0 0 64 LTL Lex, Ley 0 0 0 64 UEAJ
α1-2Fuc 0 0 0 64 FLAG-EW29Ch Gal 0 0 0 64 PTLI αGalNAc (A, Tn) 0 0 0 64 GSLIB4 αGal (B) 0 0 0 64 EEL αGal (B) 0 0 0 64 rPAIL α,βGal, αGalNAc (Tn) 0 0 0 64 DBA α,βGalNAc (A, Tn, LacDiNAc) 0 0 0 64 DBAJII
Maltose 0 0 0 64 rMalectin Glcα1-2Glc 0 0 0 64 CSA Rhamnose, Galα1-4Gal 0 0 0 64 FLAG-EW20Ch-E20K 6-sulfo-Gal 0 0 0
indicates data missing or illegible when filed
Example 4
Relationship Between Human Asgr1 and Mouse Clec10a
[0135] According to Basic Local Alignment Search Tool (BLAST), which is a tool for analyzing amino acid sequence homology and is provided by the National Center for Biotechnology Information (NCBI), in the amino acid sequences of mouse Clec10a and C-type lectin-like domain (CTLD), the human proteins with the highest homology were human Asgr1 and Clec10a (encoded by Gene ID: 432 and 10462, respectively) Human Asgr1 reporter cells and human Clec10a reporter cells expressed GFP in response to HDM stimulation (see panel a in
Example 5
Treatment of Allergic Symptom with Clec10a Ligand
[0136] The results of the previous Examples showed that Clec10a (Asgr1 in humans) is involved in control of HDM-induced allergic symptoms, indicating that ligand stimulation to Clec10a (Asgr1 in humans) is involved in suppression of allergic symptoms. In this Example, allergic symptoms were treated with ligands for Clec10a and the results were observed.
[0137] In the first induction (Day 0), the hairs of the dorsal skin of anesthetized mice (C57BL/6J WT) and Clec10a.sup.−/− mice) were removed using an electronic clipper, and the remaining hair was epilated using hair removal cream. After tape stripping to the skin in the shaved back, 50 μg LPS was topically administered in the presence or absence of Clec10a-L. The Clec10a ligand was obtained in the manner as described in the above (12) Isolation of Clec10a ligand. The procedures after tape stripping were repeated daily. This induced dermatitis. Epidermal thickness analysis was performed on Day 5 after administration and neutrophil infiltration analysis was performed 6 hours after administration. In this system, TLR4-induced dermatitis was induced.
[0138] To observe induced dermatitis, tissue sections were made by a routine method and hematocylin-Eosin staining was performed. Thereafter, the epidermal thickness and the number of neutrophils in the skin were counted.
[0139] The results were as shown in
[0140] HDM is known to contain a TLR4 ligand, which is believed to induce inflammatory and allergic symptoms, such as dermatitis. It is considered that, even in HDM stimulation, the Clec10a ligand binds to Clec10a (in humans, the Asgr1 ligand binds to its functional counterpart, Asgr1) and suppresses a TLR4 signal, resulting in an alleviation effect for inflammatory symptoms and allergic symptoms.
Example 6
Detection of Human Asgr1 Ligand
[0141]
[0142] An ELISA system with Clec10a applied to glycan-coated plates was constructed by a routine method to study the binding of each glycan with Clec10a. In the ELISA system, with the expectation that a multivalent effect is achieved by binding a plurality of glycans to the polymeric scaffold, the glycans were bound to the polymeric scaffold and presented to Clec10a. In this example, polyacrylamide (weight average molecular weight: 30 kDa) was used as the polymeric scaffold. Specifically, the glycans were modified with respect to the OH groups of the polyacrylamide side chains as follows, thereby presenting the glycans to Clec10a. This is as shown in the following formula:
##STR00001##
[0143] A PBS solution containing 1 μg/well, 0.1 ng/well, or 0.01 μg/well of the polymeric scaffold presenting the glycans at the location “Sugar” of the above formula as described above (the modification rate was 20% as per the above formula) was introduced into a 96 well plate, and incubation was performed overnight at room temperature so that the wells were coated with the glycans. Thereafter, unbound polymer was washed. Subsequently, a 10% fetal bovine serum-containing PBS solution (50 μL/well) containing 1 μg/μl Clec10a-Fc was added to the glycan-coated wells. After 1-hour incubation at room temperature, the unbound Clec10a-Fc was washed, and Clec10a-Fc bound to the plate surface was quantified with peroxidase-labeled anti-Fc antibodies. As a negative object, the polymer described above in which LeY was introduced was used.
[0144] The results were as shown in
[0145] It was confirmed whether these ligands activated Clec10a, using Clec10a-CD3c reporter cells. Then, as shown in
[0146] The above experiments revealed Clec10a-activating glycans. It was examined whether one of them, T antigen, could suppress skin inflammation against lipopolysaccharides (LPS). The polymeric scaffolds presenting 50 μg LPS and 20 μg T antigen were intradermally injected in the mouse back daily and the epidermal thickness was observed on Day 5. The results were as shown in
SEQUENCE LISTING
[0147] [Final] PT37-9002WO_ST25.txt