IMPROVEMENTS IN OR RELATING TO A METHOD OF MAINTAINING A MICRODROPLET
20230302452 · 2023-09-28
Assignee
Inventors
- Nele DIECKMANN (Cambridge, Cambridgeshire, GB)
- Gianmarco MASTROGIOVANNI (Cambridge, Cambridgeshire, GB)
- Emma Louise TALBOT (Cambridge, Cambridgeshire, GB)
- William Michael DEACON (Cambridge, Cambridgeshire, GB)
Cpc classification
B01L2200/0673
PERFORMING OPERATIONS; TRANSPORTING
International classification
Abstract
A method of maintaining at least one component in an aqueous microdroplet dispersed in conditioned oil to form an emulsion is provided. The method comprising the steps of supplementing an unconditioned oil with at least one component to form a conditioned oil; and providing the aqueous microdroplet comprising at least one component, wherein the microdroplet is dispersed in the conditioned oil to form an emulsion, such that the partitioning of the component from the microdroplet into the conditioned oil is reduced, wherein the maintenance of the component within the microdroplet is based on the partition coefficient value of the component being equal to or more than zero; or equilibrating the unconditioned oil with a media or a buffer containing at least one component to form the conditioned oil, such that the partitioning of the component from the aqueous microdroplet into the conditioned oil is reduced, wherein the maintenance of the component within the microdroplet is based on the concentration of the component in the conditioned oil being equivalent to or in excess of the product of the partition coefficient and the concentration of the component in the microdroplet. A method of method of making conditioned oil is also provided.
Claims
1. A method of maintaining at least one component in an aqueous microdroplet, the method comprising the steps of supplementing an unconditioned oil with at least one component to form a conditioned oil; and providing the aqueous microdroplet comprising at least one component, wherein the microdroplet is dispersed in the conditioned oil to form an emulsion, such that the partitioning of the component from the microdroplet into the conditioned oil is reduced, wherein the maintenance of the component within the microdroplet is based on the partition coefficient value of the component being equal to or more than zero; or equilibrating the unconditioned oil with a media or a buffer containing at least one component to form the conditioned oil, such that the partitioning of the component from the aqueous microdroplet into the conditioned oil is reduced, wherein the maintenance of the component within the microdroplet is based on the concentration of the component in the conditioned oil being equivalent to or in excess of the product of the partition coefficient and the concentration of the component in the microdroplet.
2. The method according to claim 1, wherein the at least one component in the media to unconditioned oil ratio is 1:1 v/v when formulating the conditioned oil.
3. The method according to claim 1, wherein the at least one component in the media to unconditioned oil ratio is 2:1 v/v or above when formulating the conditioned oil.
4. (canceled)
5. The method according to claim 1, wherein the conditioned oil is equilibrated with O.sub.2 and CO.sub.2.
6. The method according to claim 1, wherein the microdroplets further comprises at least one biological cell.
7. The method according to claim 1, wherein the media is cell growth media.
8. The method according to claim 7, wherein the cell growth media is selected from one or more of the following; RPMI 1640, EMEM, DMEM, Ham's F12, Ham's F10, F12-K, HAT Medium.
9. The method according to claim 1, further comprising the step of loading one or more microdroplets dispersed in the conditioned oil into a EWOD or oEWOD device.
10. (canceled)
11. The method according to claim 1, further comprises the step of introducing a replacement carrier fluid into the device, wherein the replacement carrier fluid is conditioned oil.
12-13. (canceled)
14. The method according to claim 1, wherein the method further comprises the step of incubating the microdroplets.
15. The method according to claim 1, further comprising the step of monitoring the microdroplet for cell growth.
16. The method according to claim 1, further comprising the step of performing a cell assay.
17. The method according to claim 1, further comprising one or more of the following steps: merging the microdroplets, splitting the microdroplets and/or dispensing the microdroplets.
18. The method according to claim 1, wherein the conditioned oil is selected from a mineral oil, a silicone oil or a fluorocarbon oil.
19. The method according to claim 1, wherein the component is a biological component, a small molecule or a compound.
20. A method of making conditioned oil, the method comprising the step of mixing an unconditioned oil together with aqueous media containing at least one component to form an emulsion comprising the conditioned oil at a desired temperature for use of the conditioned oil in a droplet formation, wherein the mixing enables the partitioning of at least one component to occur into the unconditioned oil to form the conditioned oil; and recovering and/or separating the conditioned oil following partitioning of the component, wherein the concentration of the media is determined by the desired concentration based on the coefficient value of the component to maintain the partitioning co-efficient value of the component in a subsequent droplet formation.
21. The method according to claim 20, wherein the at least one component in the media to unconditioned oil ratio is 1:1 v/v.
22. The method according to claim 20, wherein the at least one component in the media to unconditioned oil ratio is 2:1 v/v or above.
23. A method of droplet formation comprising a conditioned oil according to claim 20, wherein the conditioned oil mixed together with aqueous media forms an emulsion at a desired temperature of use of conditioned oil in droplet formation, recovering/separating the conditioned oil following partitioning, wherein the concentration of the media is determined by the desired concentration to maintain the partition co-efficient of at least one component during and after droplet formation.
24. A conditioned oil obtainable by the process according to claim 20.
Description
BRIEF DESCRIPTION OF THE FIGURES
[0087] The invention will now be further and more particularly described, by way of example only, and with reference to the accompanying drawings, in which:
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[0099] The present invention herein discloses a method of maintaining at least one component in an aqueous microdroplet dispersed in conditioned oil to form an emulsion. The method may comprise the step of supplementing an unconditioned oil with at least one component having a partition coefficient value that is equal to or more than zero to form the conditioned oil.
[0100] Alternatively, the conditioned oil may be prepared by equilibrating the unconditioned oil with a media containing at least one component, such that the partitioning of at least one component from the media into the unconditioned oil forms the conditioned oil. The concentration ratio of at least one component in the conditioned oil is equivalent to or in excess to the product of the partition coefficient and the concentration of at least one component in the microdroplet.
[0101] Additionally, the temperature can be controlled during the equilibration process, i.e. equilibrating the unconditioned oil with media containing at least one component, such that the rate of partitioning or transfer of components from the microdroplets into the conditioned oil can, to a certain extent, be controlled. In one example, controlling the temperature during the equilibration process can be advantageous as it can improve the efficiency of cell growth within the microdroplets. As another example, the temperature can be increased and/or decreased during the equilibration process to influence the yield of cell growth within the microdroplet.
[0102] In some embodiments, the conditioned oil can be stored long-term following equilibration at room temperature or below −20° C. In some embodiments, the recovery yield of the conditioned oil following the equilibration process as described herein can depend on the amount of emulsion formed during the equilibration process.
[0103] In some instances, at least one component in the media to unconditioned oil ratio is 1:1 v/v during conditioned oil formulation. Alternatively, at least one component in the media to unconditioned oil ratio is 2:1 v/v or above during conditioned oil formation. In some instances, the component in the media to unconditioned oil ratio may be 3:1, 4:1, 5:1, 6:1, 7:1; 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 60:1, 70:1, 80:1, 90:1 or 100:1. The ratio between the media to unconditioned oil may be determined by a volume ratio or it may be determined by a mass ratio. Subsequently, the ratio of one component in the media to conditioned oil can be 1:1 or 2:1 or it may be 3:1, 4:1, 5:1, 6:1, 7:1; 8:1, 9:1, 10:1, 15:1, 20:1, 25:1, 30:1, 35:1, 40:1, 45:1, 50:1, 60:1, 70:1, 80:1, 90:1 or 100:1 v/v.
[0104] The concentration ratio of media to unconditioned oil may be determined using the equation below
[0105] Equation to calculate initial media concentration needed:
Balanced media x=[1+V.sub.c/V.sub.w]P [0106] Where 1× will be the microdroplet media concentration.
P=partition coefficient=C.sub.c/C.sub.w [0107] V.sub.o, V.sub.w=volume oil, water phase [0108] C.sub.o, C.sub.w=concentration of component in oil, water phase
[0109] As an example only, a partition coefficient of 1 in 1:1 oil:water mixture needs 2× media for balancing conditioned oil.
[0110] The method of preparing conditioned oil may comprise the following steps of mixing an unconditioned oil together with aqueous media containing at least one component to form an emulsion comprising the conditioned oil at a desired temperature for use of the conditioned oil in a droplet formation, wherein the mixing enables the partitioning of at least one component to occur into the unconditioned oil to form the conditioned oil. Mixing can further aid partitioning by increasing interfacial surface area.
[0111] In a further step of the present invention, a step of mixing an unconditioned oil such as mineral oil, silicone oil or fluorocarbon oil together with aqueous media or water and media powder containing at least one component can occur, where the unconditioned oil may contain a surfactant.
[0112] In some embodiments, the character of the interface between the oil and aqueous phases may help reduce the partitioning of the components from the microdroplets into the oil. For example, the surfactant type and concentration, or protein arrangement at the interface influences transport and transport rate from the aqueous phase into the oil.
[0113] Other surface-active components for example BSA, can also influence the transport of one or more components out of the microdroplet's aqueous phase and into the oil phase. BSA is present in e.g. fetal bovine serum in the cell media. As long as the oil is equilibrated with the same media that is to be subsequently used, the balance can be maintained.
[0114] In some embodiments, during the droplet generation process, the droplets can be placed in a high concentration of a surfactant oil followed by transfer into another lower concentration surfactant equilibrated oil. Exchange of various components can happen so long as the oil has been equilibrated with the correct surfactant concentration. Mixing two conditioned oils of different surfactant concentrations can help maintain balance of components exchanging between the microdroplets and the oil.
[0115] The transfer of microdroplets into a lower surfactant concentration can increase retention within the microdroplets. This means that fewer components within the microdroplets partition out.
[0116] As referred to herein and unless otherwise specified, a low surfactant concentration is referred to as a concentration below or close to the critical micelle concentration. A high surfactant concentration means a concentration that is equal to or exceeding twice the critical micelle concentration.
[0117] The critical micelle concentration (CMC) can be defined as the concentration of surfactants above which micelles form and all additional surfactants added to the system will form micelles.
[0118] A component may be, but is not limited to, vitamins, salts, amino acids, nutrients and buffer components, such as pH buffer, suitable to balance reagents inside droplets. The oil can also be equilibrated with O.sub.2 or CO.sub.2 to balance pH and facilitate cell respiration. In some embodiments, the component may be FBS (fetal bovine serum) component such as growth factors.
[0119] Within the context of the present invention as disclosed herein and unless otherwise specified, the term “mixing” refers to fluids such as oil and water being in contact.
[0120] This can be achieved by either supplementing the unconditioned oil with key components such as amino acids, proteins, nutrients or gases which have a high partition coefficient. A high partition coefficient is considered to be any component with a partition coefficient equal to or more than zero, which will distribute between the oil and aqueous phase.
[0121] In some embodiments, the partition coefficient value of zero would indicate that there is little or no partitioning of components. Hence, there may be no or little loss of components moving out from the microdroplet and into the unconditioned oil. In some embodiments, a partition coefficient value of between 0 to 1 for example, 2, 3, 4, 5, 6, 7, 8 or 9 indicates medium to high partitioning of a component. Hence, there may be some medium activity of movement of components moving out of the microdroplet and into the unconditioned oil. In some embodiments, a partition coefficient value of more than 1 may indicate a high partitioning of components. Hence, there may be a substantial loss of components within the microdroplets, since a substantial amount of components can move out from the microdroplet and into the unconditioned oil.
[0122] Alternatively, the conditioned oil can be made by making use of the partition effect itself, by adding media containing components to the unconditioned oil sufficient to balance those in the emulsion droplets or an excess of said components. This technique uses the partitioning effect to transfer components into the oil from the media containing components. Additional components can also be added at this stage if desirable e.g. Fetal Bovine Serum (FBS).
[0123] The result of mixing the unconditioned oil with aqueous media or water and media powder is an emulsion comprising the conditioned oil at a desired temperature for use of the conditioned oil in a droplet formation. The mixing enables the partitioning of at least one component to occur into the unconditioned oil to form the conditioned oil. Mixing can refer to combining the unconditioned oil and the aqueous phase, and leaving the components to partition. Alternatively, mixing can refer to forcibly combining the two phases together through agitating to disperse them into each other, and increase the boundary surface area between the two phases, which in turn will speed up the partitioning process.
[0124] The conditioned oil can be recovered and/or separated following partitioning of the component, wherein the concentration of the media is determined by the desired concentration based on the coefficient value of the component to maintain the partitioning co-efficient value of the component in a subsequent droplet formation. Depending on the densities of the aqueous and oil phases, an upper phase and a lower phase will form, with the conditioned oil forming either the upper or lower phase depending on the densities of the aqueous fluid and the oil used. The separation of the two phases can take place spontaneously, or the process can be sped up by centrifuging at 1000 g for 10 seconds.
[0125] An emulsion can be formed. The emulsion may comprise the conditioned oil and the aqueous microdroplet. The microdroplet may be of any suitable shape but preferably, the microdroplet may be spherical. The microdroplet may comprise one or more cells or it may comprise proteins, nucleic acids, polysaccharides, small biologics, beads, small molecules or compounds.
[0126] The present invention as disclosed herein also discloses use of the conditioned oil for droplet formation or a method of droplet formation. An emulsion of droplets is prepared comprising the conditioned oil mixed with water or aqueous media at a desired temperature of use of conditioned oil in droplet formation. The droplets can optionally contain cells, and the media used can be cell growth media and can be one or more of the following: RPMI 1640, EMEM, DMEM, Ham's F12, Ham's F10, F12-K, HAT Medium. The desired temperature for use with droplets containing cells is 37° C. Droplets can contain other biological components, small molecules or compounds. The droplets can also optionally contain reagents, or optionally may contain a release agent. The emulsion droplets can be formed using a microfluidic device such as a flow focusing junction or step emulsifier. Media and any additional components including cells and/or beads can be flowed through an emulsifying apparatus to form droplets. Cells or any other components will be dispersed throughout the droplets.
[0127] The emulsion droplets are dispersed in the conditioned oil and loaded into an electrowetting (EWOD) or an opto-electrowetting (oEWOD) device. The conditioning of the oil means no further partitioning of the media in the emulsion droplets with the conditioned oil occurs. Droplets can be incubated and/or monitored for cell growth. Droplets can optionally be sorted by the oEWOD device depending on the desired parameters such as cell content or size. Optionally, droplets can be sorted into an array. Droplets can also be merged together or spilt. Another option enables the droplets and their content to be dispensed from the device.
[0128] A replacement carrier fluid such as the conditioned oil can be introduced to the device to replenish gas and media. Additionally, since some waste components partition out of the droplets into the oil, the toxic environment built up around any cells which may be contained within droplets held in the device, can be mitigated.
[0129] If the replacement carrier fluid were an unconditioned oil partitioning of components from the microdroplets into the oil phase would occur towards reaching thermodynamic equilibrium. In this case, replacement of the carrier fluid to replenish gas would transport components partitioned into the oil out of the device. Further partitioning of components would then occur into the fresh unconditioned oil exacerbating losses. Replacement of a conditioned carrier fluid negates losses of balanced components but still enables transport of unbalanced waste products out of the device.
[0130] Referring to
[0131] Referring to
[0132] Referring to
[0133] Referring to
[0134] The solution is sterile filtered and 10-20 vol. % FBS is added, before filtering again through a 0.2 μm sterile filter. The 6 growth media compositions are as detailed in Table 1.
[0135] Table 1 shows the composition of the prepared growth media preparations
TABLE-US-00001 Growth media RPMI + HEPES preparation conc. RPMI type FBS volume 1 1× liquid 10% 2 1× powder 10% 3 2× powder 10% 4 2× powder 20% 5 3× powder 10% 6 5× powder (saturated) 10%
[0136] The prepared growth media preparations were used to produce conditioned oils by combining two volumes of the prepared growth media with one volume of HFE7500-2% surfactant oil, and rotated overnight. The emulsion was then spun in a centrifuge at 1000 g for 10 s and filtered.
[0137] Jurkat WT cells were counted and re-suspended at a concentration of 3M in 1 mL RPMI with added HEPES.
[0138] IncuCyte Caspase 3/7 was added at a final concentration of 1 μM (1:5 000 dilution) by first preparing 100 μL of 1:100 dilution in full medium HEPES, and then adding 20 μL of the diluted Caspase to the cells. Hoechst 33342 was added at a final concentration of 250 nM (1:80 000 dilution) by preparing 800 μL of a 1:800 dilution in full medium+HEPES and then by adding 10 μL of the diluted Hoechst to the cells (further 100× dilution). Emulsification followed. All 6 growth media preparations were prepared with a 1.5 mL tube with 50 μL emulsion and 150 μL of oil, and a second 1.5 mL tube with 50 μL of emulsion only. Tubes were sealed and incubated overnight at 37° C.
[0139] Analysis was carried out using the automated count followed by manual QC in which at least two field of views (FOV) per condition were checked by eye for quality of count markups. The automated count was found to have an issue with droplet edges fluorescing strongly in the 405/Hoechst channel in some FOVs which can cause false-positive counts in total cell count and thus can artificially reduce the apparent % cell death readout. Where necessary a manual count was performed to refine or even replace automated data.
[0140] Referring to
[0141] Referring to
[0142] Referring to
[0143] The emulsion comprising the conditioned oil and the microdroplet can be loaded into an electrowetting (EWOD) or an opto-electrowetting (oEWOD) device. An example of an electrowetting device can be further described as below.
[0144] The example oEWOD device as shown in
[0145] The oEWOD stack of the device comprises top 2a and bottom 2b glass plates each 500 μm thick coated with transparent layers of conductive Indium Tin Oxide (ITO) 3 having a thickness of 130 nm. Each of the layers of conductive Indium Tin Oxide (ITO) 3 is connected to an A/C source 4 with the ITO layer on bottom glass plate 2b being the ground. Bottom glass plate 2b is coated with a layer of amorphous silicon 5 which is 800 nm thick. Top glass plate 2a and the layer of amorphous silicon 5 are each coated with a 160 nm thick layer of high purity alumina or Hafnia 6 which are in turn coated with a monolayer of poly(3-(trimethoxysilyl)propyl methacrylate) 7 to render the surfaces of the layer of high purity alumina or Hafnia 6 hydrophobic.
[0146] Top glass plate 2a and the layer of amorphous silicon 5 are spaced 8 μm apart using spacers (not shown) so that the microdroplets undergo a degree of compression when introduced into the device cavity. An image of a reflective pixelated screen, illuminated by an LED light source 8 is disposed generally beneath bottom glass plate 2b and visible light (wavelength 660 or 830 nm) at a level of 0.01 Wcm2 is emitted from each light spot 9 and caused to impinge on the layer of amorphous silicon 5 by propagation in the direction of the multiple upward arrows through bottom glass plate 2b and the layer of conductive Indium Tin Oxide (ITO) 3.
[0147] At the various points of impingement, photoexcited regions of charge 10 are created in the layer of amorphous silicon 5 which induce modified liquid-solid contact angles on the layer of high purity alumina or Hafnia 6 at corresponding electrowetting locations 11. These modified properties provide the capillary force necessary to propel the microdroplets 1 from one electrowetting location 11 to another. LED light source 8 is controlled by a microprocessor 12 which determines which of the diodes 9 in the array are illuminated at any given time by pre-programmed algorithms.
[0148] Referring to
[0149] Referring to
[0150] Referring to
[0151] As disclosed in any aspect of the invention and/or in any of the embodiments herein, the partitioning of components out of droplets can effectively be controlled when droplets are placed in the conditioned oil as described in the present invention. As an example, the partitioning of components from the microdroplets can be reduced. This invention as described herein can be applicable to many biological and/or chemical workflows such as cell assays and/or chemical reaction assays, where no cells are involved.
[0152] Various further aspects and embodiments of the present invention will be apparent to those skilled in the art in view of the present disclosure.
[0153] “and/or” where used herein is to be taken as specific disclosure of each of the two specified features or components with or without the other. For example “A and/or B” is to be taken as specific disclosure of each of (i) A, (ii) B and (iii) A and B, just as if each is set out individually herein.
[0154] Unless context dictates otherwise, the descriptions and definitions of the features set out above are not limited to any particular aspect or embodiment of the invention and apply equally to all aspects and embodiments which are described.
[0155] It will further be appreciated by those skilled in the art that although the invention has been described by way of example with reference to several embodiments, it is not limited to the disclosed embodiments and that alternative embodiments could be constructed without departing from the scope of the invention as defined in the appended claims.