PH-RESPONSIVE LIPIDOID NANOPARTICLES FOR INTRACELLULAR MRNA DELIVERY
20230321036 · 2023-10-12
Inventors
Cpc classification
A61K31/7048
HUMAN NECESSITIES
A61K31/357
HUMAN NECESSITIES
A61K31/4025
HUMAN NECESSITIES
A61K45/06
HUMAN NECESSITIES
A61K47/28
HUMAN NECESSITIES
A61K31/357
HUMAN NECESSITIES
A61K31/4025
HUMAN NECESSITIES
A61K31/704
HUMAN NECESSITIES
A61K47/6809
HUMAN NECESSITIES
A61K31/704
HUMAN NECESSITIES
A61K2300/00
HUMAN NECESSITIES
A61K2300/00
HUMAN NECESSITIES
A61K31/095
HUMAN NECESSITIES
A61K9/14
HUMAN NECESSITIES
International classification
A61K31/4025
HUMAN NECESSITIES
A61K31/357
HUMAN NECESSITIES
A61K31/7048
HUMAN NECESSITIES
A61K31/095
HUMAN NECESSITIES
A61K9/14
HUMAN NECESSITIES
A61K47/28
HUMAN NECESSITIES
Abstract
Disclosed are lipidoid compounds as well as lipidoid nanoparticles comprising such compounds.
Claims
1. A compound of formula I: ##STR00069## or a pharmaceutically acceptable salt thereof, wherein R.sup.Head is ##STR00070## R.sup.a, R.sup.a′, R.sup.a″, and R.sup.a‴ independently are R.sup.Lipid, H, C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, C.sub.2-C.sub.20 alkynyl, C.sub.3-C.sub.20 cycloalkyl, C.sub.1-C.sub.20 heteroalkyl, C.sub.1-C.sub.20 heterocycloalkyl, aryl, or heteroaryl, wherein R.sup.a and R.sup.a′or R.sup.a″and R.sup.a‴ are not both R.sup.Lipid; Z is a C.sub.1-C.sub.20 bivalent aliphatic radical, a C.sub.1-C.sub.20 bivalent heteroaliphatic radical, a bivalent aryl radical, or a bivalent heteroaryl radical; Linker is an acid labile moiety that is cleavable under aqueous acidic conditions; each instance of R.sup.Lipid independently is C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, C.sub.2-C.sub.20 alkynyl or ##STR00071## wherein: R.sup.1 and R.sup.2 independently are H, OH, NHR.sup.30, or SH; R.sup.3 and R.sup.4 are both H; or R.sup.3 and R.sup.4 are taken together to form an oxo (═O) group; X is CH.sub.2, O, NR.sup.30, or S; R.sup.30 is H, C.sub.1-6 alkyl, C.sub.1-6 alkenyl, or C.sub.1-6 alkynyl; U and V independently are S, Se, O, or CH.sub.2; m is an integer selected from 1 to 3; n is an integer selected from 1 to 14; p is 0 or 1; q is an integer selected from 1 to 10; and t is 0, 1, or 2.
2. The compound of claim 1, wherein R.sup.Head is ##STR00072## .
3. The compound of claim 2, wherein R.sup.a and R.sup.a′ independently are R.sup.Lipid, H, or C.sub.1-C.sub.20 alkyl.
4. The compound of claim 1, wherein R.sup.Head is derived from a compound selected from the group consisting of ##STR00073## ##STR00074## ##STR00075## ##STR00076## ##STR00077## ##STR00078## ##STR00079## ##STR00080## ##STR00081## ##STR00082## ##STR00083## .
5. The compound of claim 4, wherein R.sup.Head is derived from a compound selected from the group consisting of ##STR00084## ##STR00085## ##STR00086## .
6. The compound of any one of claims 1-5, wherein each instance of R.sup.Lipid independently is C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, or C.sub.2-C.sub.20 alkynyl.
7. The compound of any one of claims 1-5, wherein each instance of R.sup.Lipid independently is ##STR00087## .
8. The compound of claim 7, wherein R.sup.1 and R.sup.2 are H.
9. The compound of claim 7, wherein R.sup.1 is H; and R.sup.2 is OH.
10. The compound of any one of claims 7-9, wherein R.sup.3 and R.sup.4 are H.
11. The compound of any one of claims 7-9, wherein R.sup.3 and R.sup.4 taken together form an oxo (═O) group.
12. The compound of any one of claims 7-11, wherein Z is CH.sub.2, O, or NR.sup.30.
13. The compound of any one of claims 7-11, wherein Z is CH.sub.2.
14. The compound of any one of claims 7-11, wherein Z is O.
15. The compound of any one of claims 7-11, wherein Z is NR.sup.30.
16. The compound of any one of claims 7-15, wherein U and V are independently —CH.sub.2— or —O—.
17. The compound of any one of claims 7-15, wherein U and V are independently —CH.sub.2— or —O—, wherein U and V are not the same.
18. The compound of any one of claims 7-15, wherein U and V are independently —CH.sub.2— or —S—.
19. The compound of any one of claims 7-15, wherein U and V are both —CH.sub.2—.
20. The compound of any one of claims 7-15, wherein U and V are both —S—.
21. The compound of any one of claims 7-20, wherein m is 1 or 2.
22. The compound of any one of claims 7-21, wherein n is an integer selected from 4-12.
23. The compound of any one of claims 7-21, wherein n is an integer selected from 6-10.
24. The compound of any one of claims 7-23, wherein p is 0.
25. The compound of any one of claims 7-23, wherein p is 1.
26. The compound of any one of claims 7-25, wherein q is an integer selected from 2-8.
27. The compound of any one of claims 7-25, wherein q is an integer selected from 4-8.
28. The compound of any one of claims 7-27, wherein t is 0.
29. The compound of any one of claims 7-27, wherein t is 1.
30. The compound of any one of claims 1-29, wherein Linker is represented by formula II: ##STR00088## wherein: W is O or NH; each of R.sup.5 independently is hydrogen, halogen, nitro, cyano, amino, hydroxyl, alkoxy, alkylthio, alkyl, alkenyl, alkynyl, aralkyl, heteroaralkyl, carbocyclyl, heterocyclyl, aryl, or heteroaryl; r is an integer selected from 0 to 4; A is a 5- to 8-membered heterocycle; and R.sup.6 is absent; or R.sup.6 is alkylene or alkenylene.
31. The compound of claim 30, wherein W is O.
32. The compound of claim 30, wherein W is NH.
33. The compound of any one of claims 30-32, wherein R.sup.5 is alkoxy, e.g., methoxy.
34. The compound of claim 33, wherein r is 2.
35. The compound of any one of claims 30-34, wherein R.sup.6 is absent.
36. The compound of any one of claims 30-34, wherein R.sup.6 is methylene.
37. The compound of any one of claims 30-36, wherein A is a 6-membered heterocycle.
38. The compound of any one of claims 30-37, wherein A is unsubstituted.
39. The compound of any one of claims 30-37, wherein A is substituted with halogen, nitro, cyano, amino, hydroxyl, alkoxy, alkylthio, alkyl, alkenyl, alkynyl, aralkyl, heteroaralkyl, carbocyclyl, heterocyclyl, aryl, or heteroaryl.
40. The compound of claim 1, wherein each instance of R.sup.Lipid independently is selected from the group consisting of n-pentyl, n-hexyl, n-heptyl, n-octyl, ##STR00089## ##STR00090## ##STR00091## ##STR00092## ##STR00093## ##STR00094## ##STR00095## ##STR00096## ##STR00097## ##STR00098## ##STR00099## ##STR00100## ##STR00101## ##STR00102## ##STR00103## ##STR00104## ##STR00105## ##STR00106## ##STR00107## ##STR00108## .
41. The compound of claim 1, wherein the compound is a compound of formula III: ##STR00109## wherein R′ is derived from a compound selected from the group consisting of ##STR00110## ##STR00111## ##STR00112## ##STR00113## ##STR00114## ##STR00115## ##STR00116## ##STR00117## ##STR00118## ##STR00119## ##STR00120## and s is an integer selected from 1 to 4, as valency permits.
42. A lipidoid nanoparticle, comprising a compound of any one of claims 1-41.
43. The lipidoid nanoparticle of claim 42, wherein the lipidoid nanoparticle further comprises cholesterol.
44. The lipidoid nanoparticle of claim 43, wherein the weight ratio of the compound to the cholesterol is about 2:1 to about 8:1.
45. The lipidoid nanoparticle of claim 43, wherein the weight ratio of the compound to the cholesterol is about 4:1.
46. The lipidoid nanoparticle of any one of claims 42-45, further comprising DOPE, DSPC, DOPC; or DMG-PEG2K; wherein DSPC has the structure: ##STR00121## DOPE has the structure: ##STR00122## DOPC has the structure: ##STR00123## DMG-PEG2K has the structure: ##STR00124## .
47. The compound of any one of claims 42-45, wherein the lipidoid nanoparticle further comprises DOPE.
48. The compound of claim 47, wherein the weight ratio of the compound to the DOPE is about 4:1 to about 1:1.
49. The compound of claim 47, wherein the weight ratio of the compound to the DOPE is about 4:1 or about 1:1.
50. The lipidoid nanoparticle of any one of claims 40-49, further comprising an mRNA.
51. The lipidoid nanoparticle of claim 50, wherein the mRNA is green fluorescence protein (GFP) mRNA.
52. The lipidoid nanoparticle of any one of claims 40-51, further comprising a small molecule.
53. The lipidoid nanoparticle of claim 52, wherein the small molecule is an antifungal agent or a chemotherapeutic agent.
54. The lipidoid nanoparticle of claim 53, wherein the small molecule is selected from the group consisting of bortezomib, imatinib, gefitinib, erlotinib, afatinib, osimertinib, dacomitinib, daunorubicin hydrochloride, cytarabine, fluorouracil, irinotecan hydrochloride, vincristine sulfate, methotrexate, paclitaxel, vincristine sulfate, epirubicin, docetaxel, cyclophosphamide, carboplatin, lenalidomide, ibrutinib, abiraterone acetate, enzalutamide, pemetrexed, palbociclib, nilotinib, everolimus, ruxolitinib, epirubicin, pirirubicin, idarubicin, valrubicin, amrubicin, bleomycin, phleomycin, dactinomycin, mithramycin, streptozotecin, pentostatin, mitosanes mitomycin C, enediynes calicheamycin, glycosides rebeccamycin, macrolide lactones epotihilones, ixabepilone, pentostatin, salinosporamide A, vinblastine, vincristine, etoposide, teniposide, vinorelbine, docetaxel, camptothecin, hycamtin, pederin, theopederins, annamides, trabectedin, aplidine, and ecteinascidin 743 (ET743).
55. The lipidoid nanoparticle of claim 54, wherein the small molecule is Amphotericin B or Doxorubicin.
56. The lipidoid nanoparticle of any one of claims 42-55, wherein the lipidoid nanoparticle has a particle size of about 25 nm to about 1000 nm.
57. The lipidoid nanoparticle of any one of claims 42-55, wherein the lipidoid nanoparticle has a particle size of about 50 nm to about 750 nm.
58. The lipidoid nanoparticle of any one of claims 42-55, wherein the lipidoid nanoparticle has a particle size of about 200 nm to about 500 nm.
59. A pharmaceutical composition, comprising a lipidoid nanoparticle of any one of claims 42-58, and one or more pharmaceutically acceptable carriers or excipients.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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DETAILED DESCRIPTION
[0047] In certain aspects, provided herein are compounds of formula I:
##STR00008##
and pharmaceutically acceptable salts thereof, wherein [0048] R.sup.Head is [0049] R.sup.a, R.sup.a′, R.sup.a″, and R.sup.a‴independently are R.sup.Lipid, H, C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, C.sub.2-C.sub.20 alkynyl, C.sub.3-C.sub.20 cycloalkyl, C.sub.1-C.sub.20 heteroalkyl, C.sub.1-C.sub.20 heterocycloalkyl, aryl, or heteroaryl, wherein R.sup.a and R.sup.a′ or R.sup.a″ and R.sup.a‴ are not both R.sup.Lipid; [0050] Z is a C.sub.1-C.sub.20 bivalent aliphatic radical, a C.sub.1-C.sub.20 bivalent heteroaliphatic radical, a bivalent aryl radical, or a bivalent heteroaryl radical; [0051] Linker is an acid labile moiety that is cleavable under aqueous acidic conditions; [0052] each instance of R.sup.Lipid independently is C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, C.sub.2-C.sub.20 alkynyl or wherein: [0053] R.sup.1 and R.sup.2 independently are H, OH, NHR.sup.30, or SH; [0054] R.sup.3 and R.sup.4 are both H; or R.sup.3 and R.sup.4 are taken together to form an oxo (═O) group; [0055] X is CH.sub.2, O, NR.sup.30, or S; [0056] R.sup.30 is H, C.sub.1-6 alkyl, C.sub.1-6 alkenyl, or C.sub.1-6 alkynyl; [0057] U and V independently are S, Se, O, or CH.sub.2; [0058] m is an integer selected from 1 to 3; [0059] n is an integer selected from 1 to 14; [0060] p is 0 or 1; [0061] q is an integer selected from 1 to 10; and [0062] t is 0, 1, or 2.
[0063] In certain embodiments, R.sup.Head is
##STR00015##
##STR00016##
[0064] In certain embodiments, R.sup.a and R.sup.a′ independently are R.sup.Lipid, H, or C.sub.1-C.sub.20 alkyl.
[0065] In certain embodiments, R.sup.Head is derived from a compound selected from the group consisting of
##STR00017##
##STR00018##
##STR00019##
##STR00020##
##STR00021##
##STR00022##
##STR00023##
##STR00024##
##STR00025##
##STR00026##
##STR00027##
[0066] In certain embodiments, R.sup.Head is derived from a compound selected from the group consisting of
##STR00028##
##STR00029##
##STR00030##
[0067] In certain embodiments, each instance of R.sup.Lipid independently is C.sub.1-C.sub.20 alkyl, C.sub.2-C.sub.20 alkenyl, or C.sub.2-C.sub.20 alkynyl.
[0068] In certain embodiments, each instance of R.sup.Lipid independently is
##STR00031##
[0069] In certain embodiments, R.sup.1 and R.sup.2 are H. In certain embodiments, R.sup.1 is H; and R.sup.2 is OH.
[0070] In certain embodiments, R.sup.3 and R.sup.4 are H. In certain embodiments, R.sup.3 and R.sup.4 taken together form an oxo (═O) group.
[0071] In certain embodiments, Z is CH.sub.2, O, or NR.sup.30. In certain embodiments, Z is CH.sub.2. In certain embodiments, Z is O. In certain embodiments, Z is NR.sup.30.
[0072] In certain embodiments, U and V are independently —CH.sub.2— or —O—. In certain embodiments, U and V are independently —CH.sub.2— or —O—, wherein U and V are not the same. In certain embodiments, U and V are independently —CH.sub.2— or —S—. In certain embodiments, U and V are both —CH.sub.2—. In certain embodiments, U and V are both —S—.
[0073] In certain embodiments, m is 1 or 2.
[0074] In certain embodiments, n is an integer selected from 4-12. In certain embodiments, n is an integer selected from 6-10.
[0075] In certain embodiments, p is 0. In certain embodiments, p is 1.
[0076] In certain embodiments, q is an integer selected from 2-8. In certain embodiments, q is an integer selected from 4-8.
[0077] In certain embodiments, t is 0. In certain embodiments, t is 1.
[0078] In certain embodiments, Linker is represented by formula II:
##STR00032##
wherein: [0079] W is O or NH; [0080] each of R.sup.5 independently is hydrogen, halogen, nitro, cyano, amino, hydroxyl, alkoxy, alkylthio, alkyl, alkenyl, alkynyl, aralkyl, heteroaralkyl, carbocyclyl, heterocyclyl, aryl, or heteroaryl; [0081] r is an integer selected from 0 to 4; [0082] A is a 5- to 8-membered heterocycle; and [0083] R.sup.6 is absent; or R.sup.6 is alkylene or alkenylene;
[0084] In certain embodiments, W is O. In certain embodiments, W is NH.
[0085] In certain embodiments, R.sup.5 is alkoxy, e.g., methoxy.
[0086] In certain embodiments, r is 2.
[0087] In certain embodiments, R.sup.6 is absent. In certain embodiments, R.sup.6 is methylene. In certain embodiments, A is a 6-membered heterocycle.
[0088] In certain embodiments, A is unsubstituted.
[0089] In certain embodiments, A is substituted with halogen, nitro, cyano, amino, hydroxyl, alkoxy, alkylthio, alkyl, alkenyl, alkynyl, aralkyl, heteroaralkyl, carbocyclyl, heterocyclyl, aryl, or heteroaryl.
[0090] In certain embodiments, each instance of R.sup.Lipid independently is selected from the group consisting of n-pentyl, n-hexyl, n-heptyl, n-octyl,
##STR00033##
##STR00034##
##STR00035##
##STR00036##
##STR00037##
##STR00038##
##STR00039##
##STR00040##
##STR00041##
##STR00042##
##STR00043##
##STR00044##
##STR00045##
##STR00046##
##STR00047##
##STR00048##
##STR00049##
##STR00050##
##STR00051##
##STR00052##
[0091] In certain embodiments, the compound is a compound of formula III:
##STR00053##
wherein [0092] R′ is derived from a compound selected from the group consisting of [0093] ; and s is an integer selected from 1 to 4, as valency permits.
[0094] In certain aspects, provided are lipidoid nanoparticles, comprising a compound disclosed herein.
[0095] In certain embodiments, the lipidoid nanoparticle further comprises cholesterol.
[0096] In certain embodiments, the weight ratio of the compound to the cholesterol is about 2:1 to about 8:1.
[0097] In certain embodiments, the weight ratio of the compound to the cholesterol is about 4:1.
[0098] In certain embodiments, the lipidoid nanoparticle further comprises DOPE, DSPC, DOPC; or DMG-PEG2K; wherein [0099] DSPC has the structure: [0100] DOPE has the structure: [0101] DOPC has the structure: [0102] DMG-PEG2K has the structure:
[0103] In certain embodiments, the lipidoid nanoparticle further comprises DOPE.
[0104] In certain embodiments, the weight ratio of the compound to the DOPE is about 4:1 to about 1:1. In certain embodiments, the weight ratio of the compound to the DOPE is about 4:1 or about 1:1.
[0105] In certain embodiments, the lipidoid nanoparticle disclosed herein further comprises an mRNA. In certain embodiments, the mRNA is green fluorescence protein (GFP) mRNA.
[0106] In certain embodiments, further comprising a small molecule. In certain embodiments, the small molecule is an antifungal agent or a chemotherapeutic agent. In certain embodiments, the small molecule is selected from the group consisting of bortezomib, imatinib, gefitinib, erlotinib, afatinib, osimertinib, dacomitinib, daunorubicin hydrochloride, cytarabine, fluorouracil, irinotecan hydrochloride, vincristine sulfate, methotrexate, paclitaxel, vincristine sulfate, epirubicin, docetaxel, cyclophosphamide, carboplatin, lenalidomide, ibrutinib, abiraterone acetate, enzalutamide, pemetrexed, palbociclib, nilotinib, everolimus, ruxolitinib, epirubicin, pirirubicin, idarubicin, valrubicin, amrubicin, bleomycin, phleomycin, dactinomycin, mithramycin, streptozotecin, pentostatin, mitosanes mitomycin C, enediynes calicheamycin, glycosides rebeccamycin, macrolide lactones epotihilones, ixabepilone, pentostatin, salinosporamide A, vinblastine, vincristine, etoposide, teniposide, vinorelbine, docetaxel, camptothecin, hycamtin, pederin, theopederins, annamides, trabectedin, aplidine, and ecteinascidin 743 (ET743).
[0107] In certain embodiments, the small molecule is Amphotericin B or Doxorubicin.
[0108] In certain embodiments, the lipidoid nanoparticle has a particle size of about 25 nm to about 1000 nm. In certain embodiments, the lipidoid nanoparticle has a particle size of about 50 nm to about 750 nm. In certain embodiments, the lipidoid nanoparticle has a particle size of about 200 nm to about 500 nm.
[0109] In another aspect, provided herein are pharmaceutical compositions, comprising a lipidoid nanoparticle disclosed herein, and one or more pharmaceutically acceptable carriers or excipients.
EXAMPLES
[0110] In order that the invention described herein may be more fully understood, the following examples are set forth. The examples described in this application are offered to illustrate the compounds, compositions, materials, device, and methods provided herein and are not to be construed in any way as limiting their scope.
Materials and Methods
Materials and Instruments.
[0111] All chemicals and solvents used for lipidoid synthesis were purchased from Millipore-Sigma and used without purification unless otherwise noted. .sup.1H and .sup.13C NMR spectra were collected on a Bruker AVIII 500 MHz NMR spectrometer. ESI-MS spectra were collected on a Finnigan LTQ Mass Spectrometer using methanol as a solvent (0.5% acetic acid; v/v). Hydrodynamic sizes of nanoparticles were measured by a Brookhaven Zeta-PALS particle size analyzer. TEM images were taken on a FEI Technai Transmission Electron Microscope. GFP mRNA transfected cells were analyzed with an Invitrogen Attune NxT Flow Cytometer, and data was analyzed using FlowJo software.
Synthesis of O16CBA.
[0112] The synthetic route for cyclic benzylidene acetal-containing hydrophobic tail, O16CBA, is shown in
[0113] HexDMBAH was synthesized using a similar procedure reported previously. Briefly, HexDMBA (5.2 g, 19.5 mmol) and 1,1,1-tris(hydroxymethyl)ethane (6.7 g, 55.9 mmol) were dissolved in anhydrous tetrahydrofuran (200 mL). 5 Å molecular sieves (30 g) and p-toluenesulfonic acid (0.44 g, 2.56 mmol) were then added. The reaction mixture was stirred at room temperature for 12 h, molecular sieves were filtered out, and solvent was removed via rotary evaporation. HexDMBAH was purified by silica gel column chromatography, with hexane and ethyl acetate as the mobile phase. HexDMBAH was recovered as a white solid (5.4 g; yield ~75 %), and its structure was confirmed by 1H NMR (
[0114] HexDMBAH (5.4 g, 14.7 mmol) was dissolved in dichloromethane (~150 mL) followed by triethylamine (2.2 g, 22.1 mmol). The solution was cooled in an ice bath for 15 minutes, and acryloyl chloride (2.00 g, 22.1 mmol) was slowly added dropwise. The reaction mixture was allowed to warm to room temperature and was stirred for 12 h. After silica gel column chromatography purification, with the same mobile phase as previously described, O16CBA was obtained as a white solid (4.5 g; yield ~73 %). Its structure was confirmed using .sup.1H and .sup.13C NMR (
Synthesis of O16CBA-Tailed Lipidoids.
[0115] Lipidoids were synthesized from the O16CBA tail and amine heads via the Michael addition reaction, using our previously reported procedure. To synthesize 75-O16CBA etc., amines (75, 76, 77, 78, 80, 81, 82, and 93) were mixed with O16CBA at a 1/2.2 molar ratio. To synthesize 113-O16CBA etc., amines (113, 306, and 400) were mixed with O16CBA at a 1/3.3 molar ratio. These mixtures were placed in Teflon-lined glass screw-top vials for 48 h at 70° C. with continuous stirring. The mixtures were cooled to room temperature and diluted with dichloromethane. The crude products were purified using a Teledyne ISCO Chromatography purification system, with dichloromethane and methanol as the mobile phase. The lipidoids were characterized by .sup.1H NMR, .sup.13C NMR (
Fabrication of Lipidoid Nanoparticles.
[0116] The lipidoid nanoparticles without helper lipids (i.e. cholesterol and DOPE) were prepared by dissolving pure O16CBA lipidoids (75-O16CBA etc.) in ethanol. Water was added as the selective solvent to trigger the self-assembly process with 10 min of sonication in an ultrasonic water bath. This was followed by dialysis (MWCO 3.5 kDa; Slide-A-Lyzer dialysis cassette; ThermoFisher Scientific) to remove the ethanol. The lipidoid nanoparticles with cholesterol and DOPE were prepared by dissolving a precalculated amount of O16CBA lipidoids, cholesterol, and DOPE (O16CBA lipidoid/cholesterol/DOPE = 4/1/1 or 4/1/4; weight ratio) in ethanol and then water. This was again followed by sonication and dialysis.
[0117] GFP mRNA- (purchased from TriLink) loaded lipidoid nanoparticles were fabricated by mixing lipidoid nanoparticles (with or without helper lipids) and mRNA in PBS with a weight ratio of 10/1 (O16CBA lipidoid/mRNA). The mixture was incubated at room temperature for 15 min before use.
Intracellular Delivery of mRNA.
[0118] 48-well plates were seeded with HeLa cells at an initial concentration of 20 k cells per well dispersed in 250 .Math.L of DMEM cell culture media and incubated for 24 h. 20 .Math.L of the mRNA-loaded lipidoid nanoparticles were then added into each well. The cells were incubated for another 24 h at 37° C. and 5% CO.sub.2 prior to flow cytometry analysis.
MTT Assay.
[0119] 96-well plates were seeded with HeLa cells at an initial concentration of 5000 cells per well dispersed in 100 .Math.L of DMEM cell culture media and incubated for 24 h. Lipidoid nanoparticles were then added into each well. The cells were incubated for another 24 h at 37° C. and 5% CO2 before MTT reagent (5 mg/mL; in 30 .Math.L PBS) was added. After 4 h incubation, the culture medium was carefully removed and 200 .Math.L of DMSO was added to each well. After dissolving the formazan with DMSO solution, the absorbance at 570 nm was determined using a microplate reader (Molecular Devices Spectra Max).
Statistical Analysis.
[0120] Data were reported as mean ± SD. Experiments were repeated at least three times. Student’s t-tests were performed to determine the significance of differences between groups. P values less than 0.05 were considered to be statistically significant.
Example 1. Lipoid Synthesis
[0121] The pH-responsive cyclic benzylidene acetal-containing hydrophobic tail, O16CBA, was first synthesized through a multistep reaction (
[0122] A combinatorial library of cationic lipidoids was then synthesized through the Michael addition reaction by reacting acrylate-containing O16CBA tails with commercially available amine-containing head groups (75, 76, 77 etc.;
[0123] The cyclic benzylidene acetal moiety in the lipidoid tail can be cleaved through a hydrolysis reaction facilitated by acid. It has been previously reported that 2,4,6-trimethoxyphenyl groups containing cyclic acetal groups can be readily degraded at pH 5.23, The R-O16CBA lipidoids synthesized in this study were thus expected to degrade in mild acidic conditions, dissociating the self-assembled nanoparticles (
Example 2 pH-Responsiveness of R-O16CBA Lipidoids
[0124] In this library, lipidoids containing two tails, such as 75-O16CBA and 76-O16CBA, have both their tails cleaved through acid degradation. During this process, the products R-O16CBA-1, R-O16CBA-0, and HexDMBA can form (
[0125] In comparison, only 1.9% and 3.3% acetal bond degradation occurred for 75-O16CBA lipidoids after 8 and 24 h incubated at pH 7.2. The characteristic proton signals indicated in
[0126] The acid-triggered lipidoid degradation was further confirmed by ESI-MS. 75-O16CBA, 76-O16CBA, and 77-O16CBA lipidoid nanoparticles were prepared and incubated at 37° C. in aqueous solutions with pH values of 7.2, 6.0, 5.0, and 4.5 respectively. After 24 h, the LNP aqueous solutions were diluted with methanol containing 0.5% acetic acid and examined by ESI-MS. As shown in
Example 2 Acid-Induced Degradation of O16CBA Lipidoid Nanoparticles
[0127] The morphological change of O16CBA LNPs under acid-induced degradation was studied using TEM and DLS. In this study, 75-O16CBA LNPs were fabricated using a self-assembly procedure. Through TEM examination, it was confirmed that spherical nanoparticles with average sizes of 315 nm formed in the pH 7.2 solution (
[0128] Due to the self-assembly packing parameters of the lipidoid molecules and the self-assembly procedures that were employed, almost all of our previsouly studied combinatorial lipidoid nanoparticles have the vescular/liposomal structures. The supramolecular structures of lipidoid nanoparticles (e.g. morphology, size, etc.) are supposed to be reliant on both of the chemical structures of lipidoid mlecules and assembly conditions. The size and distribution of lipidoid nanoparticles can also be further optimized using microfluidics, mechanical extrusion, and other techniques.
[0129] After 24 h incubation at pH 5.0, lipidoid nanoparticles were disrupted and amorphous aggregates around 130 nm resulted (
Example 4 R-O16CBA LNPs for mRNA Delivery
[0130] The possibility of using R-O16CBA molecules as the active lipidoids for intracellular mRNA delivery was explored. In this study, different formulations were prepared. As shown in Table 1, R-O16CBA LNPs contain R-O16CBA only; R-O16CBA-F1 LNPs contain R-O16CBA, cholesterol, and DOPE at a weight ratio of 4/1/1; R-O16CBA-F2 LNPs contain R-O16CBA, cholesterol, and DOPE at a weight ratio of 4/1/4. Cholesterol and DOPE were added because previous studies have shown that these helper lipids can increase the stabilization of nanoparticles, membrane infusion, and cellular internalization.
TABLE-US-00001 Codes and parameters of lipidoid nanoparticle formulations used in this study Code Weight ratio Lipidoid Cholesterol DOPE R-O16CBA 4 0 0 R-O16CBA-F1 4 1 1 R-O16CBA-F2 4 1 4
[0131] GFP mRNA was loaded into different nanoparticle formulations by mixing mRNA and LNPs in PBS buffer (R-O16CBA/mRNA = 10/1; weight ratio). Most of the combinatial LNPs showed great stability during storage. Furthermore, the stability of LNPs can be further improved by adding small- and macromolecular excipients (cholesterol, DOPE, PEG-DSPE etc.) into the formulations. It should be noted that in all of the following studies, freshly prepared LNPs were used unless otherwise noted. The mRNA and LNPs were added to HeLa cells, and the delivery efficiencies were determined using flow cytometry after 24 h of incubation ([R-O16CBA] = 7.4 .Math.g/mL;[GFP mRNA] = 0.74 .Math.g/mL;exposure duration = 24 h). Intracellular mRNA delivery efficiency was represented by the percentage of GFP+ cells. Commercially available cationic transfection reagent, Lpf2k, was used as a positive control. Untreated HeLa cells and HeLa cells treated with naked GFP mRNA were used as negative controls. As shown in
[0132] It was discovered that the neutral helper lipids (cholesterol and DOPE) in R-O16CBA formulations played an essential role in mRNA delivery. Without helper lipids, the delivery efficiencies were rather low, as eight of the LNP formulations (75-O16CBA and 76-O16CBA etc.) had efficiencies below 15%. Two lipidoid nanoparticles, 113-O16CBA and 306-O16CBA, induced 29% and 44% GFP+ cells respectively, while the most active 400-O16CBA induced 68% GFP+ cells. The outperformance of lipidoids with more than two tails (113-, 306-, and 400-O16CBA) compared to lipidoids with two tails (75-O16CBA etc.) for nucleic acid delivery is consistent with previous reports and merits further study.
[0133] The addition of helper lipids greatly improved LNP delivery efficacy, with multiple LNPs achieving GFP expression comparable to that of Lpf2k. In the library of R-O16CBA-F1 formulations, all LNPs, except for 93-O16CBA-F1 (~2% GFP+ cells), showed higher efficacies than their corresponding R-O16CBA formulations. Nine of the R-O16CBA-F1 formulations had >50% delivery efficiency, with 81-O16CBA-F1 being the highest in producing ∼93% GFP+ cells. Other top formulations such as 76-, 77-, 113-, 306-, and 400-O16CBA-F1 induced delivery efficacies of 78-83%.
[0134] The effects of increasing the amount of helper lipids on mRNA delivery was then investigated. Formulations with R-O16CBA/cholesterol/DOPE at a weight ratio of 4/1/4 were fabricated and tested (R-O16CBA-F2). As shown in
[0135] Compared to the R-O16CBA-F1 LNPs, the delivery efficacies of R-O16CBA-F2 were slightly lower (except for 75- and 78-O16CBA-F2). 81-O16CBA-F2 was determined to be the most efficient in this formulated library as ~78% GFP+ cells were recorded. Once again, 113-, 306-, and 400-O16CBA-F2 were still among the top LNPs, as their delivery efficacies were determined to be 57-73%.
[0136] Overall, the addition of helper lipids can improve most LNP delivery efficacies. R-O16CBA-F2 LNPs, which had higher DOPE content, had comparable or slightly lower efficacies than R-O16CBA-F1 LNPs. In addition, 81-O16CBA-F1 and -F2 were determined to be the most efficient in the two formulation libraries, and three-tailed LNPs performed well both with and without helper lipids.
Example 5 Cytotoxicity Test
[0137] As discussed above, some of the R-O16CBA formulations achieved comparable mRNA delivery efficacies to that of the commercial reagent Lpf2k. Besides efficacy, the biocompatibility of carriers was also examined. Although Lpf2k is highly efficient, previous research indicated it is also toxic. In this context, the cytotoxicities of four successful R-O16CBA LNPs, namely one two-tailed lipidoid (81-O16CBA) and three multiple-tailed lipidoids (113-, 306-, and 400-O16CBA), were tested using the MTT assay ([lipidoid] = 7.4 .Math.g/mL; exposure duration = 24 h). The addition of helper lipids like cholesterol and DOPE would result in very similar to slightly lower cytotoxicity of the formulations, which is reasonable considering the excellent cell compatibility of cholesterol and DOPE etc. As shown in
INCORPORATION BY REFERENCE
[0138] All of the U.S. patents, and U.S. and PCT published patent applications cited herein are hereby incorporated by reference.
EQUIVALENTS
[0139] The foregoing written specification is considered to be sufficient to enable one skilled in the art to practice the invention. The present invention is not to be limited in scope by examples provided, since the examples are intended as a single illustration of one aspect of the invention and other functionally equivalent embodiments are within the scope of the invention. Various modifications of the invention in addition to those shown and described herein will become apparent to those skilled in the art from the foregoing description and fall within the scope of the appended claims. The advantages and objects of the invention are not necessarily encompassed by each embodiment of the invention.