AUTOMATED MICROSCOPIC CELL ANALYSIS
20230294089 · 2023-09-21
Inventors
- Ronald Jones (Newton, NH, US)
- Adrian Gropper (Watertown, MA)
- Robert Hagopian (Belmont, MA, US)
- Charles Rogers (Halifax, MA, US)
- Thomas Vitella (Sandown, NH, US)
- Donald Barry, Jr. (Groton, MA, US)
- Dirk Osterloh (Arlington, MA, US)
- Chen Yi (Boxborough, MA, US)
- Tyler Cote (Chelmsford, MA, US)
Cpc classification
B01L2300/0627
PERFORMING OPERATIONS; TRANSPORTING
B01L2200/16
PERFORMING OPERATIONS; TRANSPORTING
B01L3/502738
PERFORMING OPERATIONS; TRANSPORTING
B01L2200/0647
PERFORMING OPERATIONS; TRANSPORTING
B01L3/502715
PERFORMING OPERATIONS; TRANSPORTING
Y10T436/101666
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
G01N1/30
PHYSICS
G01N2035/00148
PHYSICS
International classification
B01L3/00
PERFORMING OPERATIONS; TRANSPORTING
G06V20/69
PHYSICS
G01N33/50
PHYSICS
Abstract
This disclosure describes single-use test cartridges, cell analyzer apparatus, and methods for automatically performing microscopic cell analysis tasks, such as counting blood cells in biological samples. A small unmeasured quantity of a biological sample such as whole blood is placed in the disposable test cartridge which is then inserted into the cell analyzer. The analyzer isolates a precise volume of the biological sample, mixes it with self-contained reagents and transfers the entire volume to an imaging chamber. The geometry of the imaging chamber is chosen to maintain the uniformity of the mixture, and to prevent cells from crowding or clumping, when it is transferred into the imaging chamber. Images of essentially all of the cellular components within the imaging chamber are analyzed to obtain counts per unit volume. The devices, apparatus and methods described may be used to analyze a small quantity of whole blood to obtain counts per unit volume of red blood cells, white blood cells, including sub-groups of white cells, platelets and measurements related to these bodies.
Claims
1. A single-use cartridge for use with an apparatus that includes an automated microscope for analyzing cells in a biological sample, comprising: a) a sample collection port for receiving the sample, b) a metering chamber for holding a predetermined volume of the sample, c) a diluent channel configured to be in fluid communication with a liquid reagent, d) a mixing chamber, e) an imaging chamber adapted to allow images of the cells from the biological sample to be acquired by the automated microscope, and f) at least one movable valve mechanism configured to (1) create fluid communication in a first position between the sample collection port and the metering chamber, and (2) in a second position to create fluid communication between the sample contained in the metering chamber and the diluent channel, the imaging chamber and the mixing chamber; wherein the imaging chamber has sufficient volume to contain all of the predetermined volume of sample from the metering chamber when mixed with an unknown portion of the liquid reagent and has a depth such that the cells are substantially separated and are not overlapping in images acquired by the automated microscope.
2. The single-use cartridge of claim 1 wherein the movable valve mechanism is a rotary valve having a cylindrical stem.
3. The single-use cartridge of claim 2 wherein the metering chamber is a pass-through conduit within the cylindrical stem.
4. The single-use cartridge of claim 2 wherein the metering chamber is a recessed volume on the face of the cylindrical stem.
5. The single-use cartridge of claim 1 wherein the liquid reagent is prepackaged in a vessel on the cartridge.
6. The single-use cartridge of claim 1 wherein the liquid reagent is contained in a vessel external to the cartridge and the diluent channel is adapted to provide fluid communication between the cartridge and the external vessel.
7. The single-use cartridge of claim 1 where the liquid reagent includes a sphering agent such a zwitterionic detergent to provide isovolumetric reshaping of the red blood cells.
8. The single-use cartridge of claim 1 where the liquid reagent includes an antibody conjugated to a detectable label that targets specific cells or specific antigens associated with cells.
9. The single-use cartridge of claim 1 further comprising a photometric measuring chamber in fluid communication with the sample collection port.
10. The single-use cartridge of claim 1 wherein a portion of the imaging chamber is a photometric measuring chamber.
11. A single-use cartridge for use with an apparatus that includes an automated microscope for analyzing cells in a biological sample, and an apparatus that prepares a mixed sample by mechanically mixing a measured volume of the biological sample with a diluent/reagent comprising: a) an input port for receiving the mixed sample, b) an imaging chamber having sufficient volume to contain all of the mixed sample comprising a length that is at least ten times its width and a depth such that the cells are substantially separated and are not overlapping in images acquired by the automated microscope, and c) a vent in fluid communication with the input port and the imaging chamber.
12. The single-use cartridge of claim 11 wherein the shape of the imaging chamber in planar view is serpentine.
13. The single-use cartridge of claim 12 wherein the total volume of the imaging chamber is less than 100 microliters and the depth is less than 200 μm.
14. A system that includes an automated microscope for analyzing cells in a biological sample, comprising: a single-use cartridge with a body that defines: a) a sample collection port for receiving the sample, b) a metering chamber for holding a predetermined volume of the sample, c) a diluent channel configured to be in fluid communication with a liquid reagent, d) a mixing chamber, e) an imaging chamber adapted to allow images of the cells from the biological sample to be acquired by the automated microscope, and f) at least one movable valve mechanism configured to create fluid communication in a first position between the sample collection port and the metering chamber, and in a second position to create fluid communication between the sample contained in the metering chamber and the diluent channel, the imaging chamber and the mixing chamber; a fluid control system comprising at least one fluid moving device and a mechanism configured to operate the at least one movable valve to sequentially (i) transfer a portion of the biological sample to fill the metering chamber, (ii) to isolate all of the volume of the biological sample contained within the metering chamber from the remaining sample, (iii) dilute the entire volume of sample contained within the metering chamber with a portion of the liquid reagent, (iv) mix the sample volume with the portion of the liquid reagent, and (v) transfer all of the mixed volume to the imaging chamber for analysis by the automated microscope.
15. The system of claim 14 wherein the portion of the liquid reagent is a pre-determined metered volume and the dimensions of the imaging chamber are pre-determined and known.
16. The system of claim 14 wherein the volume of the portion of the liquid reagent is approximate and unknown and the dimensions of the imaging chamber are approximate and unknown.
17. The system of claim 14 wherein the mixing chamber is combined with the imaging chamber such that the step of mixing the sample with the portion of the liquid reagent occurs at the same time as the step of transferring all of the mixed volume to the imaging chamber.
18. The system of claim 14 wherein the shape of the imaging chamber in planar view is serpentine.
19. The system of claim 14 wherein the total volume of the imaging chamber is less than 100 microliters and the depth is less than 200 μm.
20. A method for determining the number of red blood cells, and/or white blood cells and/or platelets per unit volume in a blood sample comprising: a) transferring a portion of the blood sample to fill a metering chamber having a predetermined volume of less than 5 microliters, (b) isolating all of the volume of the blood sample contained within the metering chamber from the remaining sample, (c) diluting and mixing the entire volume of sample contained within the metering chamber with an unknown volume of a liquid reagent to create a mixed sample, (d) transferring all of the mixed sample to an imaging chamber configured to allow images of all the cells in the mixed sample to be acquired by a digital camera, (e) analyzing the images to determine the total number of red blood cells, and/or white blood cells, and/or platelets in the mixed sample, and (f) mathematically dividing the total number of each type of cell by the predetermined volume of the metering chamber and reporting the number of red blood cells, and/or white blood cells and/or platelets per unit volume in the blood sample.
21. The method of claim 20 wherein the metering chamber and the imaging chamber are both contained within a single disposable test cartridge.
22. The method of claim 20 wherein the step of analyzing the images includes identification of all items in all images across the entire imaging chamber.
23. The method of claim 20 wherein the step of analyzing the images includes identification of all items in a statistical sampling of images across the entire imaging chamber such that the statistical sample produces the same results within accepted error percentages as would be obtained by analyzing all images across the entire imaging chamber.
24. The method of claim 20 wherein the steps (a), (b), and (c) are performed in apparatus adapted to create the mixed sample and the total volume of the mixed sample is transferred to additional apparatus to perform steps (d), (e) and (f).
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0038] The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided by the Office upon request and payment of the necessary fee.
[0039] In the drawings, like reference characters generally refer to the same parts throughout the different views. The drawings are not necessarily to scale, emphasis instead being placed upon illustrating the principles of the invention. In the following description, various embodiments of the present invention are described with reference to the following drawings, in which:
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DETAILED DESCRIPTION
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[0062] A valve driver 235 can be positioned to operate a rotary valve on the test cartridge. A vacuum/pressure pump 240 supplies negative or positive pressure to a manifold 245, which interfaces with the test cartridge 100 when it is placed in the cell analyzer as described below. The cell analyzer 200 further includes system controller 250 to control movement of the fluids in the test cartridge by activating the vacuum/pressure pump 240, moving the mechanical presser foot 230, or operating the valve driver 235 according to pre-programmed sequences. Monitoring camera 255, positioned to acquire digital images of the fluids in the cartridge, provides feedback for the system controller 250. Monitoring light source 256 may be a ring illuminator that surrounds the lens of the monitoring camera 255. Information from the monitoring camera 255 is used to provide feedback for controlling movement of liquids, for positioning the rotary valve, and for confirming critical steps.
[0063] Also shown in
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[0067] In one embodiment, the size of the vessel within reagent supply module 470 is of sufficient capacity to provide diluent/reagents to dilute and/or stain from ten to about one-hundred samples with a diluent/reagent to sample ratio of 10:1 to about 250:1. The reagent supply module 470 further can include a self-priming mechanism for priming the liquid reagent and eliminating air bubbles. In such an embodiment, the reagent supply module 470 may include a chamber for collecting waste reagent from the priming process. Once the test cartridge 402 is docked with the reagent supply module 470 the combined pieces perform the same functions as test cartridge 401 except that the reagent supply module 470 replaces the blister pack 417. Inside cell analyzer 200 the vacuum/pressure pump 240 makes connections through manifold 245 to sample driver port 411 and mixture driver port 429. The interfaces between the manifold 245 and these ports are constructed with a suitable shape and/or elastomeric material to ensure an airtight connection so that system controller 250 can control movement of the fluids in the test cartridge (see
[0068] The only volume that is measured precisely is the metered volume of the original biological sample. Various means for metering a small volume of liquid are well known in the art. Two devices that are well suited for low cost, single use applications according to the present invention are shown in
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[0070] When assembled in the rotary valve 415 (
[0071] Now turning our attention to
[0072] By illustration and with reference to
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[0074] In
[0075] In
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[0079] Turning our attention to
[0080] If the pass-through conduit 413 is correctly filled the diluent/reagent channel is primed at box 540 as described above with reference to
[0081] Once a sufficient volume of diluent/reagent is transferred, rotary valve 415 is positioned as shown in
[0082] If test cartridge 400 is used, it is inserted into cell analyzer 200 and analysis begins at step 560. Analysis of test cartridge 401 or 402 continues at step 560 when the x-y stage 225 moves the test cartridge 401 to obtain bright-field and fluorescent images of the entire imaging chamber 403 at box 560. In an alternate embodiment, objective lens 265 and/or digital camera 280 are moved and test cartridge 401 remains stationary. In yet another embodiment objective lens 265 has sufficient field of view to capture the entire imaging chamber 403 without movement. Two digital images of each physical frame of the imaging chamber are transferred to image processor/computer 290 at box 565. One image, taken with bright-field optics, can be compared to the other image taken with fluorescent optics to identify red blood cells, white blood cells and platelets. Further analysis of the white cell sizes and internal structure can identify sub-types of white cells using pattern recognition.
[0083] At box 570 comparison of the bright-field and fluorescent images can differentiate mature red cells from reticulocytes and nucleated red blood cells. By dividing each cell count by the known volume of the metering chamber 483, the concentration (cells per unit volume) can be determined. By using a sphering agent the planar sizes of red cells can be transformed into mean corpuscular volume (MCV). Combining the red blood cell count with MCV and the volume of the metering chamber 483 allows the calculation of hematocrit (HCT) and red cell distribution width (RDW). Further calculations using the separately measured HGB from box 525, combined with the RBC count gives mean corpuscular hemoglobin (MCH), and mean corpuscular hemoglobin content (MCHC).
[0084] At box 575 the measured results are compared with previously defined limits and ranges for the particular patient population and determination is made whether the results are within or outside normal expected ranges. According to this determination results within normal ranges are reported in box 580 and results that are outside the normal ranges are reported in box 585.
EXAMPLES
Example 1: Information from Bright-Field and Fluorescent Optics
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[0086] White blood cells have significant RNA and DNA and therefore can be seen in the fluorescent images having green and orange structures. The size and shape of the green nuclear structure and overall size of the white cells can be used to differentiate them into sub-groups identified by name in the first column. Notably the basophil and eosinophil sub-groups of white cells have characteristic features in the bright-field image due to the presence of large granules in the cytoplasm. Therefore embodiments of the present invention make use of both bright-field and fluorescent image analysis to differentiate sub-groups of white cells.
[0087] Platelets also take up the AO stain but the size of a platelet is significantly smaller than any white cell and can therefore be differentiated. Because red cells lose their nucleus as they mature, they do not have nuclear material to take up the AO stain. Consequently the red cells can be identified as the objects that appear in the bright-field and cannot be seen in the fluorescent field. The immature red cells, called reticulocytes and the nucleated red blood cells (nRBC) have attributes of red cells but also show small levels of fluorescence. Embodiments of the present invention make use of these combined attributes to identify and sub-group red blood cells.
Example 2. Statistical Sampling of the Imaging Chamber
[0088] Table 1 illustrates a comparison of CBC parameters obtained according to the present invention and from an automated hematology analyzer.
TABLE-US-00001 TABLE 1 Column1 # pairs RBCs WBCs ROI RBC/f RBC/f(%)- WBC/f WBC/f(%) RBC/WBC 100% 9916 2455492 5125 3818.7 643.02 100.0 1.342 100.0 479.12 50% 4958 1229669 2535 1913.7 642.56 99.9 1.325 98.7 485.08 25% 2479 623048 1285 968.5 643.28 100.0 1.327 98.9 484.86 10% 992 242197 519 373.5 648.48 100.8 1.390 103.5 466.66 5% 496 126186 262 197.2 639.82 99.5 1.328 99.0 481.63 1% 100 23683 63 35.6 664.61 103.4 1.768 131.7 375.92
indicates data missing or illegible when filed [0089] Sample: Low WBC count—approximately 2000/uL (normal is 3,000-10,000/uL). [0090] Magnification: 20× [0091] Number of images: approximately 10,000 bright-field and 10,000 fluorescent [0092] Variable: Column 1—Percentage of total cells use in the calculation [0093] Column #pairs—the number of pairs of images (bright-field plus fluorescent) [0094] Column RBCs— total number of Red Blood Cells counted [0095] Column WBCs— total number of White Blood Cells counted [0096] Column ROI— total Region of Interest. This is the ‘effective’ number of image frames occupied by actual sample. A frame totally filled with sample/cells is “1”. A partial frame (due to an edge or the curved ends of the serpentine shape), is a fraction of a frame (e.g. 0.567). [0097] Column RBC/f—Average number of Red Blood Cells per frame (Column RBCs divided by Column 5 ROI). [0098] Column RBC/f (%)— This is the RBC/frame value at a particular sampling percentage divided by the RBC/frame for the 100% sampling case (top line). This is an estimate of the accuracy of the particular sampling percentage compared to counting 100% of the cells. [0099] Column WBC/f—Average number of White Blood Cells per frame (Column WBCs divided by Column ROI). [0100] Column 9 WBC/f (%)— This is similar to Column 7 but estimates the accuracy of the sampling percentage for the White Blood Cells. [0101] Column RBC/WBC— This is the ratio of RBC/WBC for the particular sampling percentage. Results: A small percentage of the total frames can provide accurate results. As a smaller fraction of the total frames are counted, the accuracy is maintained down to 1% for Red Blood Cells and down to 5% for White Blood Cells. [0102] Discussion: In these experiments, it took approximately one second to capture an image pair. For this experiment, where almost 10,000 image pairs were needed to capture 100% of the sample, this means that image analysis took 10,000 seconds or approximately 2.8 hours. The experiment shows that the uniformity of the distribution of cells across the imaging chamber was good enough to provide accurate results by counting cells in only 5% of the frames. The goal of “counting every cell” is achieved because the entire sample size (the Region of Interest ROI) is measured, but only 5% of the images need to be analyzed to get accurate results. This reduces the image analysis time to approximately 8 minutes. It is expected that advances in camera and computer processing technology will further reduce this time.
[0103] The present invention has now been described in connection with a number of specific embodiments thereof. However, numerous modifications which are contemplated as falling within the scope of the present invention should now be apparent to those skilled in the art. Therefore, it is intended that the scope of the present invention be limited only by the scope of the claims appended hereto. In addition, the order of presentation of the claims should not be construed to limit the scope of any particular term in the claims.