NMDA RECEPTOR CONSTRUCTS TO DETECT AND ISOLATE NMDAR AUTOANTIBODIES
20230280340 · 2023-09-07
Inventors
- Hans-Christian Kornau (Berlin, DE)
- Harald Prüss (Berlin, DE)
- Craig Curtis Garner (Berlin, DE)
- Tanita Frey (Tokyo, JP)
Cpc classification
C07K2319/40
CHEMISTRY; METALLURGY
G01N33/564
PHYSICS
C07K2319/30
CHEMISTRY; METALLURGY
G01N2333/70571
PHYSICS
G01N2800/52
PHYSICS
International classification
G01N33/564
PHYSICS
Abstract
A soluble N-methyl-D-aspartate receptor (NMDAR) protein construct includes one or more NMDAR autoantibody epitopes. The construct includes an extracellular domain (ECD) of the NMDAR subunit GluN1 or a fragment of the subunit and an ECD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment of these subunits. An in vitro method for the detection of NMDAR autoantibodies in a sample includes providing a sample suspected of including NMDAR autoantibodies, providing the NMDAR protein construct as a capture molecule, contacting the sample with the NMDAR protein construct, thereby binding NMDAR autoantibodies from the sample to the NMDAR protein construct, and determining the presence and optionally the amount of bound NMDAR autoantibodies. The method is applied for the diagnosis, prognosis, disease monitoring, patient stratification and/or therapy monitoring of a medical condition associated with autoantibodies against the NMDAR, preferably anti-NMDAR encephalitis.
Claims
1. An N-methyl-D-aspartate receptor (NMDAR) protein construct comprising one or more NMDAR autoantibody epitopes, wherein the construct comprises an extracellular domain (ECD) of the NMDAR subunit GluN1 or a fragment thereof and an ECD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment thereof, wherein the protein construct lacks a NMDAR transmembrane domain.
2. (canceled)
3. The NMDAR protein construct according to claim 1, wherein the construct comprises a dimerization domain and/or a capture domain.
4. The NMDAR protein construct according to claim 3, wherein the dimerization domain is the capture domain, preferably formed by an antibody Fc-fragment.
5. The NMDAR protein construct according to claim 1, wherein the ECD of GluN1 or fragment thereof comprises or consists of the amino terminal domain (ATD) of GluN1 or a fragment thereof, and/or wherein the ECD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment thereof comprises or consists of the ATD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment thereof, respectively.
6. The NMDAR protein construct according to claim 1, wherein the ECD of GluN1 and the ECD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment thereof, are covalently linked, preferably as a fusion protein.
7. The NMDAR protein construct according to claim 1, wherein the construct is a protein dimer of non-covalently bound monomers, wherein the construct can be a homodimer or a heterodimer.
8. The NMDAR protein construct according to claim 7, wherein the construct is a heterodimer formed from the ECD of GluN1 or fragment thereof (as one monomer) and the ECD of at least one of the NMDAR subunits GluN2A, GluN2B, GluN2C or GluN2D, or fragment thereof (as one monomer).
9. An in vitro method for the detection of NMDAR autoantibodies in a sample, the method comprising, a. providing a sample suspected of comprising NMDAR autoantibodies, b. providing a NMDA protein construct according to claim 1 comprising a capture domain as a capture molecule, c. contacting said sample with said NMDAR protein construct, thereby binding NMDAR autoantibodies from said sample to said NMDAR protein construct, and d. determining the presence of bound NMDAR autoantibodies.
10. The method according to claim 9, wherein the NMDAR autoantibodies in said sample are present in solution or on a cell-membrane.
11. The method according to claim 9, wherein the method is carried out with multiple and different of the NMDAR protein constructs.
12. The method according to claim 9, wherein the method is applied for the diagnosis, prognosis, disease monitoring, patient stratification and/or therapy monitoring of a medical condition associated with autoantibodies against the NMDAR, preferably anti-NMDAR encephalitis, and the sample suspected of comprising NMDAR autoantibodies is a sample of a human subject exhibiting symptoms of having said medical disorder.
13. The method according to claim 9, wherein the method is applied for therapy guidance of a subject suspected of having and/or developing a medical condition associated with NMDAR autoantibodies, the method comprising selecting one or more corresponding NMDAR protein construct(s) for subsequent treatment of said subject.
14. A kit for the diagnosis of an autoimmune disease associated with NMDAR autoantibodies in a subject by detection of NMDAR autoantibodies, comprising: a. an NMDAR protein construct according to claim 1 or an NMDAR protein construct according to claim 1 immobilized on a solid surface, and a labelled secondary affinity reagent directed to human NMDAR autoantibodies and a detector for detecting the signal emitted from said label, or b. a labelled NMDAR protein construct according to claim 1.
15. A blood treatment device configured to remove NMDAR autoantibodies from the blood or blood plasma of a person in need thereof in an extracorporeal blood circuit, wherein the device comprises a matrix having one or more NMDAR protein constructs according to claim 1 immobilized thereon.
16. The method according to claim 11, further comprising additionally determining against which NMDAR protein construct of said multiple constructs the NMDAR autoantibodies bind.
17. The method according to claim 11, further comprising additionally determining against which NMDAR protein construct of said multiple constructs the NMDAR autoantibodies bind in the largest amounts and/or most efficiently bind.
18. The kit according to claim 14, wherein the disease associated with NMDAR autoantibodies is-NMDAR encephalitis.
Description
BRIEF DESCRIPTION OF THE FIGURES
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DETAILED DESCRIPTION OF THE FIGURES
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[0224] Concerning the
Examples
[0225] The invention is further described by the following examples. These are not intended to limit the scope of the invention but represent preferred embodiments of aspects of the invention provided for greater illustration of the invention described herein.
[0226] Technical Question
[0227] Is it possible to generate recombinant soluble fusion proteins for labelling, detection and isolation of NMDA receptor autoantibodies against NMDA receptors of different subunit compositions within the serum and CSF of patients?
Solution
[0228] The amino terminal domain (ATD) of the NMDA receptor subunit GluN1, with or without additional extracellular domains of GluN1, alone or combined with extracellular domains of the NMDA receptor subunits GluN2A or GluN2B were fused to the constant region of rabbit IgG1 heavy chain (rbFc).
[0229] Fc mediated dimerization of expressed proteins may lead to epitopes highly similar to native NMDA receptors and may lend unprecedented stability to the fusion proteins. These soluble recombinant NMDA receptor Fc (srNR-Fc) fusion proteins/antigens are able to detect NMDA receptor autoantibodies against different NMDA receptor subunit compositions present in the serum of NMDAR encephalitis patients and therefore represent the core subject matter of this invention.
[0230] The ELISA method used to detect NMDA receptor autoantibodies with srNR-Fc fusion proteins/antigens may be used as a companion diagnostic.
Detailed Examples
Example 1: Exemplary Protein Constructs of the Invention Generated for Experiments
[0231] We have generated constructs encompassing extracellular parts of GluN1 and GluN2 subunits (
[0232] Constructs #1, 2, 3, 5, 6 and 9 (Table 3) are Fc fusion proteins of either GluN1 or GluN2 domains, whereas in constructs #4, 7 and 8 domains of both GluN1 and GluN2B, separated by an artificial linker, are fused to Fc in a single molecule. The Fc domain will likely lead to dimerization of all the fusion proteins, leading to GluN1/GluN2 heterodimers upon co-expression of construct #1 or 2 with #5, 6, 9 or 3, respectively, or dimers of GluN1/GluN2 heterodimers upon expression of constructs #4, 7 and/or 8 (
TABLE-US-00003 TABLE 3 Soluble recombinant NMDA receptor rbFc fusion proteins that are comprised by and/or represent NMDAR protein constructs of the invention. NMDA receptor part: amino acids in GenBank entry Fusion Protein No of amino acids in NMDA receptor # Designation Composition part/whole protein 1 N1-ATD-Fc hsGluN1-ATD-rbFc 1-400 (NM_007327) 400/631 2 N1ecd-Fc hsGluN1-ATD-S1-GT- 1-544-GT-663-800 (NM_007327) S2-rbFc 684/915 3 N2Becd-Fc hsGluN2B-ATD-S1-GT- 1-540-GT-662-803 (NM_000834) S2-rbFc 684/915 4 N1ecd-N2Becd- hsGluN1-ATD-S1-GT- 1-544-GT-663-800 (NM_007327)-GST- Fc S2-linker-hsGluN2B- 3xGGGGS-GAA-SR- ATD-S1-GT-S2-rbFc 29-540-GT-662-803 (NM_000834) 1363/1594 5 N2A-ATD-Fc hsGluN2A-ATD-rbFc 1-408 (NM_001134407) 408/639 6 N2B-ATD-Fc hsGluN2B-ATD-rbFc 1-408 (NM_000834) 408/639a 7 N1-ATD-N2A- hsGluN1-ATD-linker- 1-400(NM_007327)-GST-3xGGGGS-GAA-SR- ATD-Fc hsGluN2A-ATD-rbFc 28-408 (NM_001134407) 804/1035 8 N1-ATD-N2B- hsGluN1-ATD-linker- 1-400(NM_007327)-GST-3xGGGGS-GAA-SR- ATD-Fc hsGluN2B-ATD-rbFc 29-408(NM_000834) 803/1034 9 N2C-ATD-Fc hsGluN2C-ATD-rbFc 1-405 (NM_000835) 405/636a hs, human. rb, rabbit. Ecd, extracellular domain. ATD, amino terminal domain. No, number. Fc, constant region of rabbit IgG1 heavy chain.
[0233] We established an ELISA to test the ability of srNR-Fc proteins to detect NMDA receptor antibodies in the serum of patients. Briefly, srNR-Fc proteins in cell culture supernatants were captured on 96-well plates via anti-rabbit Fc or anti-rabbit IgG antibodies. NMDAR encephalitis patient sera or human monoclonal antibodies were applied and bound antibody detected using either Biotin-conjugated anti-human IgG and horseradish peroxidase (HRP)-conjugated streptavidin or HRP-conjugated anti-human IgG antibody, and the HRP substrate ultraTMB.
Example 2: Soluble NMDA Receptor rbFc Fusion Proteins are Recognized by a Recombinant Human GluN1 Autoantibody
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Example 3: Soluble NMDA Receptor rbFc Fusion Proteins Detect NMDA Receptor Autoantibodies in Patients' Sera
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Example 4: Autoantibody Detection by Soluble NMDA Receptor rbFc Fusion Proteins in Sera with Known Anti-NMDA Receptor Titers
[0236] To test how the ELISA based on srNR-Fc proteins compares to the clinical standard assay, we went on to measure sera with a known titer from the Euroimmun CBA (
[0237] We used two srNR-Fc combinations expressing the ATDs of GluN1 and GluN2B in this assay (N1-ATD-Fc+N2B-ATD-Fc and N1-ATD-N2B-ATD-Fc). They contain the same amino acids of the NMDAR (Table 1), but in one case the antigen is reconstituted from two separate proteins, while the other construct contains the ATDs connected by an artificial linker as a single protein. These two antigens gave comparable signals with sera S10-S12, but differed considerably in sera S13 and S14. Antigen N1-ATD-Fc+N2B-ATD-Fc yielded small, comparable signals in S13 and S14. In contrast, N1-ATD-N2B-ATD-Fc did not detect any NMDAR antibody signal in S13 and a strong signal in S14. The molecular make-up of N1-ATD-N2B-ATD-Fc may have prevented access of the NMDAR autoantibodies present in S13 to their epitope. This finding emphasizes that several srNR-Fc combinations should be tested to detect as many antibodies as possible.
Example 5: Soluble NMDA Receptor rbFc Fusion Proteins Detect Subtype-Selective Recombinant Human NMDA Receptor Autoantibodies
[0238] Some autoantibodies were detected by soluble NMDA receptor Fc antigens encompassing the extracellular domains of two different NMDA receptor subunits, but not by soluble NMDA receptor Fc antigens containing the extracellular domains of a single NMDA receptor subunit (
[0239] The soluble NMDA receptor Fc antigens were used to determine if a specific subunit combination is targeted by recombinant human NMDA receptor autoantibodies. NMDA receptor autoantibody 008-218 was detected by soluble NMDA receptor Fc antigens either containing the ATDs of GluN1 and GluN2A or containing the ATDs of GluN1 and GluN2B with a comparable efficiency. However, anti-NR-Ab1 was detected by soluble NMDA receptor Fc antigens containing the ATDs of GluN1 and GluN2B, but not by soluble NMDA receptor Fc antigens containing the ATDs of GluN1 and GluN2A (
[0240] The soluble recombinant NMDA receptor Fc antigen N1-ATD-N2B-ATD-Fc yielded higher signals than the assembled antigen N1-ATD-Fc+N2B-ATD-Fc with the GluN1/GluN2B-subtype-selective antibody anti-NR-Ab1 (
Example 6: Detection of Recombinant Human NMDA Receptor Autoantibodies by Three Soluble NMDA Receptor rbFc Fusion Proteins
[0241] In a test of three soluble recombinant NMDA receptor Fc antigens, N1-ATD-N2B-ATD-Fc yielded the highest signals with several of the examined human recombinant NMDA receptor autoantibodies, while N1-ATD-Fc+N2B-ATD-Fc yielded a comparable or higher signal for others (
[0242] Discussion of the Examples
[0243] The results provided here serve as a proof of concept. We conclude (1) that soluble fusion proteins containing the amino terminal domain of GluN1 and rabbit Fc heterologously expressed in and secreted from HEK293 cells are able to bind NMDA receptor autoantibodies in patients' serum and (2) that efficient detection of NMDA receptor autoantibodies by soluble antigens benefits from the incorporation of extracellular domains of GluN2. Furthermore, use of the different srNR-Fc antigens may allow classifying patients' anti-NMDA receptor immune response.
[0244] Detection of autoreactivity against select NMDA receptor subtypes may enable a differential diagnosis in anti-NMDA receptor encephalitis and in other medical conditions associated with antibodies to the NMDA receptor.
Further Examples of Experimental Applications of Constructs of the Invention
[0245] ELISA Screen for Recombinant LGI1 Antibodies Using an NMDA Receptor Fusion Protein as a Control.
[0246] For generating the mammalian expression constructs used in this experiment the cDNAs for amino acids 1-558 of human LGI1 (NM_005097.3) and for amino acids 1-400 of human GluN1 (NM_007327) were inserted into pFuse-rIgG-Fc1 (InvivoGen). The resulting plasmids encode hsLGI1 or the amino terminal domain (ATD) of hsGluN1 fused to the Fc region of rabbit IgG (amino acids SKP-PGK) linked by amino acids GSSTMVRS. The chimeric constructs LRR1-EPTP2 and LRR2-EPTP1 encode rabbit Fc fusions of amino acids 1-223 of LGI1 and amino acids 218-545 of LGI2 or amino acids 1-217 of LGI2 and amino acids 224-557 of LGI1, respectively.
[0247] Antibody binding to LGI1-Fc and to NMDA receptor subunit GluN1-ATD-Fc was compared in an ELISA. 96-well high-binding microplates (Greiner #655061) coated with donkey anti-rabbit IgG (10 μg/mL, Dianova, #711-005-152) were blocked and incubated with cell culture supernatants of HEK293 cells that expressed Fc fusion proteins. Cell culture supernatants containing monoclonal antibodies, CSF samples or purified antibodies and horseradish peroxidase (HRP)-conjugated donkey-anti-human IgG (1:5,000, Dianova, #709-035-149) were sequentially applied. After thorough washing, HRP activity was measured using 1-Step Ultra TMB-ELISA substrate (Thermo Fisher). The presence of immobilized antigens was confirmed by incubation with HRP-conjugated F(ab′)2 donkey-anti-rabbit IgG (1:50,000, Dianova, #711-036-152). Human recombinant anti-GluN1 antibody 003-102 (Kreye J, Wenke N K, Chayka M, et al. Human cerebrospinal fluid monoclonal N-methyl-D-aspartate receptor autoantibodies are sufficient for encephalitis pathogenesis. Brain 2016; 139:2641-2652) was used at 10 ng/ml. The results are displayed in
[0248] ELISA Quantification of Recombinant Human NR1(GluN1) AB in Mouse Brain Extracts Using an NMDA Receptor Fusion Protein.
[0249] Concentration of recombinant human NR1 AB #003-102 in brain extracts was determined in 96-well plates coated overnight at 4° C. with donkey-anti-rabbit IgG (20 μg/mL, Dianova, #711-005-152). After blocking with 2% BSA in PBS/0.05% Tween-20 (PBS/T) at RT, cell culture supernatants of HEK293 cells that expressed the amino terminal domain (amino acids 1-400) of human NR1 (GluN1) fused to rabbit Fc were applied. Mouse brain extracts were diluted 1:25/1:100 in 0.4% BSA-PBS/T and added in duplicates. Plates were washed with PBS/T and incubated with horseradish peroxidase (HRP)-conjugated donkey-anti-human IgG (1:5,000, Dianova, #709-035-149). After washing, HRP activity was measured using 1-Step Ultra TMB-ELISA substrate (Thermo Fisher). The concentrations of #003-102 in the extracts were deduced from a calibration curve generated with purified #003-102. The results are displayed in
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