SALMONELLA STRAIN FOR TREATING CANCER AND USE THEREOF
20230346851 · 2023-11-02
Inventors
- Jung Joon Min (Gwangju, KR)
- Mi Ryung Song (Gyeonggi-do, KR)
- Sung Hwan YOU (Gwangju, KR)
- Yeong Jin Hong (Gwangju, KR)
- Nguyen Dinh Huy (Jeollanam-do, KR)
Cpc classification
C07K14/4748
CHEMISTRY; METALLURGY
C07K14/70596
CHEMISTRY; METALLURGY
C07K14/24
CHEMISTRY; METALLURGY
A61P35/00
HUMAN NECESSITIES
International classification
C07K14/24
CHEMISTRY; METALLURGY
C07K14/705
CHEMISTRY; METALLURGY
A61P35/00
HUMAN NECESSITIES
Abstract
The present invention relates to a Salmonella strain that selectively acts on cancer for the treatment of cancer, and a composition for preventing or treating cancer containing the same. In particular, the Salmonella strain according to the present invention has a tumor-suppressing effect, but has a significantly low viability in normal organs, and thus may have a significant anticancer effect compared to conventional inventions.
Claims
1. A Salmonella sp. mutant strain in which Salmonella pathogenicity island-1 (SPI-1) and Salmonella pathogenicity island-2 (SPI-2) are deleted.
2. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella pathogenicity island-1 (SPI-1) consists of the nucleotide sequence set forth in SEQ ID NO: 1.
3. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella pathogenicity island-2 (SPI-2) consists of the nucleotide sequence set forth in SEQ ID NO: 2.
4. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella sp. mutant strain is one into which a gene encoding an anticancer protein has been additionally introduced.
5. The Salmonella sp. mutant strain according to claim 4, wherein the anticancer protein is at least one selected from the group consisting of a toxin protein, an antibody specific for a cancer antigen or a fragment of the antibody, a tumor suppressor protein, an angiogenesis inhibitor, a cancer antigen, a prodrug-converting enzyme, and a pro-apoptotic protein.
6. The Salmonella sp. mutant strain according to claim 5, wherein the toxin protein is at least one selected from the group consisting of ricin, saporin, gelonin, momordin, debouganin, diphtheria toxin, Pseudomonas toxin, hemolysin (HlyA), FAS ligand (FASL), tumor necrosis factor-α (TNF-α), TNF-related apoptosis-inducing ligand (TRAIL), and cytolysin A (ClyA).
7. The Salmonella sp. mutant strain according to claim 6, wherein the cytolysin A consists of the nucleotide sequence set forth in SEQ ID NO: 15.
8. The Salmonella sp. mutant strain according to claim 5, wherein the tumor suppressor protein is at least one selected from the group consisting of retinoblastoma (RB) protein, p53 protein, adenomatous polyposis coli (APC) protein, phosphatase and tensin homologue (PTEN) protein, and cyclin dependent kinase inhibitor 2A (CDKN2A) protein.
9. The Salmonella sp. mutant strain according to claim 5, wherein the angiogenesis inhibitor is at least one selected from the group consisting of angiostatin, endostatin, thrombospondin, and protease inhibitory proteins.
10. The Salmonella sp. mutant strain according to claim 5, wherein the cancer antigen is at least one selected from the group consisting of α-fetoprotein (AFP), vascular endothelial growth factor receptor 2 (VEGFR2), Survivin, Legumain, and prostate cancer-specific antigen (PCSA).
11. The Salmonella sp. mutant strain according to claim 5, wherein the prodrug-converting enzyme is at least one selected from the group consisting of thymidine kinase, cytosine deaminase, nitroreductase, purine nucleoside phosphorylase, carboxypeptidase G2, chromate reductase YieF, herpes simplex virus type I thymidine kinase/ganciclovir (HSV1-TK/GCV), and β-glucuronidase.
12. The Salmonella sp. mutant strain according to claim 5, wherein the pro-apoptotic protein is L-ASNase or RNA-binding motif protein 5 (RBM5).
13. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella sp. mutant strain is derived from at least one selected from the group consisting of Salmonella typhimurium, Salmonella choleraesuis, Salmonella enteritidis, Salmonella infantis, Salmonella paratyphi, and Salmonella typhi.
14. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella sp. mutant strain is a mutant strain lacking ability to synthesize guanosine polyphosphate.
15. The Salmonella sp. mutant strain according to claim 1, wherein the Salmonella sp. mutant strain is at least one in which ppGpp synthase-encoding Salmonella-relA gene is inactivated, or Salmonella-spoT gene is inactivated.
16. A method for producing a Salmonella sp. mutant strain, the method comprising a step of removing Salmonella pathogenicity island-1 (SPI-1) and Salmonella pathogenicity island-2 (SPI-2) genes from a Salmonella sp. strain to obtain a transformed strain.
17-27. (canceled)
28. pharmaceutical composition for preventing or treating cancer, the pharmaceutical composition containing, as an active ingredient, the Salmonella sp. mutant strain according to claim 1.
29. (canceled)
30. A composition for diagnosing cancer, the composition containing, as an active ingredient, the Salmonella sp. mutant strain according to claim 1.
31. A method for providing information for diagnosing cancer, the method comprising a step of treating a biological sample, isolated from a subject of interest, with the strain according to claim 1.
32. The method according to claim 31, further comprising a step of diagnosing cancer when a reporter protein is expressed from the strain.
33. A method for preventing or treating cancer, the method comprising a step of administering to a subject an effective amount of the Salmonella sp. mutant strain according to claim 1.
34. The method according to claim 33, wherein the cancer is selected from the group consisting of melanoma, fallopian tube cancer, brain cancer, small intestine cancer, esophageal cancer, lymph adenocarcinoma, gallbladder cancer, blood cancer, thyroid cancer, endocrine adenocarcinoma, oral cancer, liver cancer, biliary tract cancer, colorectal cancer, rectal cancer, cervical cancer, ovarian cancer, kidney cancer, stomach cancer, duodenal cancer, prostate cancer, breast cancer, brain tumor, lung cancer, undifferentiated thyroid cancer, uterine cancer, colon cancer, bladder cancer, ureter cancer, pancreatic cancer, bone/soft tissue sarcoma, skin cancer, non-Hodgkin's lymphoma, Hodgkin's lymphoma, multiple myeloma, leukemia, myelodysplastic syndrome, acute lymphoblastic leukemia, acute myeloid leukemia, chronic lymphocytic leukemia, chronic myelogenous leukemia, and solitary myeloma.
Description
BRIEF DESCRIPTION OF DRAWINGS
[0113]
[0114]
[0115]
[0116]
[0117]
[0118]
[0119]
[0120]
[0121]
[0122]
[0123]
[0124]
[0125]
[0126]
[0127]
[0128]
[0129]
[0130]
[0131]
[0132]
[0133]
[0134]
[0135]
[0136]
[0137]
[0138]
[0139]
[0140]
[0141]
BEST MODE
[0142] According to an embodiment of the present invention, the present invention is directed to a Salmonella sp. mutant strain in which Salmonella pathogenicity island-1 (SPI-1) and Salmonella pathogenicity island-2 (SPI-2) are deleted.
Mode for Invention
[0143] Hereinafter, the present invention will be described in more detail with respect to examples. These examples are only for explaining the present invention in more detail, and it will be obvious to those of ordinary skill in the art that the scope of the present invention according to the subject matter of the present invention is not limited by these examples.
PREPARATION EXAMPLE 1
Construction of Attenuated Salmonella
[0144] An attenuated Salmonella strain of the present invention was constructed by using the SHJ2037 strain as a template and deleting a pathogenicity-related gene or gene cluster by homologous recombination using lambda (λ) phage.
[0145] Specifically, a DNA fragment having a Kan cassette at the position of the open reading frame of each gene was amplified by PCR using the pKD13 plasmid. The PCR primer sequences used for removal of a total of three genes (clusters) are shown in Table 1 below. The PCR product pKD46 was introduced into a Salmonella typhimurium SMR2130 (SHJ2037, DrelA, DspoT) suspension containing cells by an electroporation method, and colonies were selected by culturing in a kanamycin medium. Then, a pCP20 plasmid (Datsenko K A, et al., Proc Natl Acad Sci USA. 2000, June; 97(12):6640-5) was introduced into the transformed strains by electroporation, and the kan cassette was removed by FLP recombinase, thereby constructing strains.
TABLE-US-00001 TABLE 1 Primer sequence Primer sequence Mutant strain Gene (forward: 5′ .fwdarw. 3′) (reverse: 5′ .fwdarw. 3′) CNC16 hilD SEQ ID NO: 3 SEQ ID NO: 4 CNC17 SPI 1 SEQ ID NO: 5 SEQ ID NO: 6 CNC18 SPI 1 and 2 SEQ ID NO: 7 SEQ ID NO: 8
PREPARATION EXAMPLE 2
Construction of Recombinant Salmonella for Gene Expression
[0146]
[0147] Thereafter, through PvuII and HindIII fragments of the pJL39 plasmid, a divergent promoter region containing a multiple cloning site was introduced into the pBAD-TetR plasmid, thereby constructing a pTetR-BAD plasmid. Using NheI and Pcil restriction enzymes, the araC and araBAD promoters were removed from the pTetR-BAD plasmid, thereby constructing a pTetII plasmid.
[0148] In addition, the constitutive promoter OXB1, obtained by amplification using pSF-OXB1 (Oxford Genetics, England) as a template and a forward primer (5′-CTACTCCGTCAAGCCGTCAAGCTGTTGTGACCGCTTGCT-3; SEQ ID NO: 11) and a reverse primer (5′-TGAATTCCTCCTGCTAGCTAGTTGGTAACGAATCAGACGCCGGGTAATACCG GATAG-3′; SEQ ID NO: 12), was introduced into the pTetII plasmid by the Gibson assembly method, thereby constructing a pJH18 plasmid comprising the OXB1, tetA and tetR promoters.
[0149] Using the pJH18 plasmid as a template, the genes encoding Rluc8 and cytolysin A (ClyA) were introduced downstream of the promoters in the combination shown in
PREPARATION EXAMPLE 3
Construction of Transformed Salmonella sp. Mutant Strain
[0150] The plasmid constructed in Preparation Example 2 was transformed by electroporation into the Salmonella strains constructed in Preparation Example 1, and then each of the transformed strains was cultured overnight using a lysogeny broth (LB) solid medium containing 100 μg/ml of ampicillin. Thereafter, the resulting colonies were cultured in LB liquid media containing ampicillin and used in the experiment. Table 2 below summarizes the transformed contents in the Salmonella sp. mutant strains constructed as described above.
TABLE-US-00002 TABLE 2 Mutant Inserted strain Deleted genes genes Comparative Example 1 SHJ2037 relA, spoT ClyA, Rluc8 Comparative Example 2 CNC16 relA, spoT, hilD ClyA, Rluc8 Comparative Example 3 CNC17 relA, spoT, SPI 1 ClyA, Rluc8 Preparation Example CNC18 relA, spoT, SPI 1, 2 ClyA, Rluc8
EXPERIMENTAL EXAMPLE 1
Evaluation of Protein Expression and Activity of Recombinant Salmonella
[1-1] Comparison of Growth Between of Salmonella Mutant Strains and Existing Strains
[0151] Each of the recombinant SHJ2037 and CNC18 colonies prepared in Comparative Example 1 and the Preparation Example was grown overnight in an LB liquid medium containing ampicillin, and then diluted at a ratio of 1:100 with a fresh LB medium and further cultured. When the OD.sub.600 value reached 0.5 to 0.7, doxycycline diluted with ethanol to a final concentration of 200 ng/ml was added to the cultures which were then cultured in a shaking incubator under conditions of 200 rpm and 37° C. The growth patterns of the strains were analyzed by measuring the OD.sub.600 value at different culture time points, and the results are shown in
[0152] Meanwhile, the non-recombinant existing Salmonella colonies were treated in the same way as described above, and the results are shown in
[0153] As shown in
[1-2] Comparison of Protein Expression Levels by Western Blot Analysis
[0154] In order to compare the expression level of the cytolysin A (ClyA) gene between the recombinant Salmonella strains SHJ2037 and CNC18 constructed in Comparative Example 1 and the Preparation Example, expression of Rluc8 protein in the strains cultured as described in Experimental Example [1-1] was analyzed by Western blot analysis using an antibody specific to the protein.
[0155] Specifically, the cultures of each strain cultured in Experimental Example [1-1] was diluted with PBS to a concentration of 4×10.sup.7 CFU/ml and centrifuged at 13,000 rpm for 5 minutes, and the pellet fraction was collected. The pellet fraction was washed with PBS and mixed with an SDS sample buffer containing 0.2% β-mercaptoethanol (Catalog No. EBA-1052. ELPIS BIOTECH) to obtain a strain lysate. Thereafter, the strain lysate was electrophoresed on 12% SDS-PAGE gel, and the protein on the gel was transferred to a nitrocellulose membrane and blocked with 5% skim milk at room temperature. Thereafter, the expression level of the Rluc8 protein was analyzed using Rluc8 antibody (Catalog No. AB3256, Millipore, USA), and the results are shown in
[0156] As shown in
[1-3] Comparison of Functional Expression Level of Protein by Activity Assay
[0157] In order to measure the luciferase activity in the strains cultured in Experimental Example 1, each of the strains was resuspended in 1 ml of PBS. Next, 1 μg/ml of the substrate coelenterazine diluted in ethanol was added to the resuspended strain, and then the luciferase activity value in the strain was measured for an exposure time of 1 second using NightOWL II LB 983 In Vivo imaging system (Berthold technologies, GmbH & Co. KG, Germany) or Biorad Imager ChemoDoc™ XRS+ system. The measured value was normalized by the CFU of each strain, and the normalized value was calculated as relative luminescence units (RLUs), and the results are shown in
[0158] As shown in
[0159] In addition, the PBS-diluted recombinant Salmonella strain selected in Preparation Example 3 was plated on a blood agar plate containing 0 or 20 ng/ml of doxycycline, and cultured overnight at 37° C., and the plates were imaged. The results are shown in
[0160] As shown in
[0161] From the above results, it is confirmed that the recombinant Salmonella strain CNC18 according to the present invention can regulate cytolysin A (ClyA) gene expression and functions as an anticancer gene vehicle.
EXPERIMENTAL EXAMPLE 2
Examination of Release of DAMP Signals from Tumor Cells by Recombinant Salmonella Treatment
[0162] In order to evaluate the effects of the recombinant Salmonella strains on tumor cells, changes in damage-associated molecular patterns (DAMP) that can cause an immune response in the tumor cells treated with each of the SHJ2037 and CNC18 strains were examined. Among the DAMPs, ATP that is released extracellularly was measured. Specifically, the mouse CT26 colon cancer cell lines CRL-2638 and HB-8064 (ATCC, USA) were cultured with high-glucose DMEM (Dulbecco's Modified Eagles Medium) medium (catalog number: #LM 001-05, Welgene, Korea) containing 10% fetal bovine serum (FBS) and 1% penicillin-streptomycin in a 5% CO.sub.2 incubator at 37° C., and then the tumor cells were treated and co-cultured with the recombinant Salmonella. The ATP from each of the cultures was measured using an assay kit at different time points, and the results are shown in
[0163] As shown in
EXPERIMENTAL EXAMPLE 3
Analysis of Distribution of Recombinant Salmonella in Small Animal Tumor Models
[0164] The attenuated Salmonella strain was injected into small animal mouse models, which are used in research on anticancer treatment, and the growth rate and distribution of the strain in the host were examined.
[0165] Specifically, four kinds of strains (SHJ2037, CNC16, CNC17, and CNC18) were each cultured in LB liquid medium, and then washed and diluted with PBS. Each of the strains was injected into the tail vein of each mouse to a final strain concentration is 2×10.sup.7 CFU/mouse, and 3 mice per strain were euthanized. Then, the organs of the host were extracted, minced, and diluted. Each dilution was plated and incubated on solid LB medium, and viable cells were counted. The results are shown in
[0166] As a result, as shown in
[0167] On the other hand, as shown in
[0168] In addition, CNC17 also showed higher viability than the strain SHJ2037 in the liver, indicating that the strain CNC17 also has non-specific targeting ability.
[0169] As shown in
EXPERIMENTAL EXAMPLE 4
Analysis (1) of Hyperinflammatory Response upon Salmonella Injection
[0170] First, in order to examine the hyperinflammatory response upon Salmonella injection, nine CT26 tumor model mice were injected with the strains SHJ2037 and CNC18 and PBS, respectively (three mice per strain or PBS), and the weight of the spleen of each mouse was measured at different time points and compared. As shown in
[0171] As shown in
EXPERIMENTAL EXAMPLE 5
Analysis (2) of Hyperinflammatory Response upon Salmonella Injection
[0172] In addition, in order to examine the hyperinflammatory response upon Salmonella injection, each of the strains SHJ2037, CNC16, CNC17 and CNC18 was injected to mouse in the same way as described in Experimental Example 4, and the weight of the spleen of each mouse was measured on days 1, 3, and 5 and compared.
[0173] As a result, as shown in
[0174] From the above results, it was confirmed that the attenuated Salmonella strain according to the present invention died rapidly with a significantly decreased viability in all the normal organs from the initial stage of infection while maintaining strong tumor targeting ability, indicating the minimized side effects of the strain on the host.
EXPERIMENTAL EXAMPLE 6
Analysis (1) of Anticancer Effect of Attenuated Salmonella in Small Animal Tumor Models
[0175] The tumor cells (CT26 1×10.sup.6 cell/mice) cultured as in Experimental Example 2 were injected subcutaneously into the flanks of mice (BALB/C, n=7), thereby constructing tumor animal models. Each of the Salmonella strains SHJ2037 and CNC18 was injected into the tail vein of each of the tumor animal models. To evaluate the anticancer effect of each strain in the tumor animal models, the mice were anesthetized with 2% isoflurane, and then the tumor volume (mm.sup.3) was measured using the formula (length×height×width)/2. The results are shown in
[0176] As shown in
[0177] Therefore, it was confirmed that the strain CNC18, which dies rapidly with a significantly decreased viability in all normal organs from the initial stage of infection while maintaining strong tumor targeting ability, has excellent tumor treatment efficacy while minimizing side effects caused by infection in the host.
EXPERIMENTAL EXAMPLE 7
Analysis (2) of Anticancer Effect of Attenuated Salmonella in Small Animal Tumor Models
[0178] Cultured tumor cells (MC38, murine colon adenocarcinoma cells, 1×10.sup.6 cell/mice) were injected subcutaneously into the flanks of mice (C57BL/6, n=6), thereby constructing tumor animal models. Each of the Salmonella strains SHJ2037 and CNC18 was injected into the tail vein of each of the tumor animal models. To evaluate the anticancer effect of each strain in the tumor animal models, the mice were anesthetized with 2% isoflurane, and then the tumor volume (mm.sup.3) was measured using the formula (length×height×width)/2. The results are shown in
[0179] As shown in
EXPERIMENTAL EXAMPLE 8
Evaluation of Immune Activation Effect of Salmonella Injection
[0180] To evaluate the immune activation effect of Salmonella injection, immune cells were measured and compared. Each of the Salmonella strains SHJ2037 and CNC18 was injected into the tumor animal models constructed described in Experimental Example 6, and immune cells were collected on day 3. The immune cells were collected from a tumor and peri-tumor lymph nodes. The amount of the collected immune cells was measured and the results are shown in
[0181] As shown in
[0182] From the above results, it was confirmed that the attenuated Salmonella strain CNC18 according to the present invention had the effect of significantly increasing the immune function compared to the PBS control group and the SHJ2037 control group.
EXPERIMENTAL EXAMPLE 9
Analysis (1) of Tumor Imaging by Salmonella
[0183] The tumor cells cultured as described in Experimental Example 2 were injected subcutaneously into the flanks of mice, thereby constructing tumor animal models. Each of the Salmonella strains SHJ2037lux and CNC18lux was injected into these models. Here, the strains SHJ2037lux and CNC18lux were strains into which a luminescence gene has been introduced into the strain SHJ2037 and the strain CNC18. As the luminescence gene, a bacterial luciferase gene (lux) was used.
[0184] In order to evaluate the imaging effect of each strain in the tumor animal models, organs and tumors were extracted at each time points and then imaged using in vivo imaging system (IVIS). The results are shown in
[0185] As shown in
EXPERIMENTAL EXAMPLE 10
Analysis (2) of Tumor Imaging by Salmonella
[0186] Multiple myeloma models were constructed by injecting cultured MOPC cells into the shinbones of mice, and then each of the Salmonella strains SHJ2037lux and CNC18lux was injected into the models in the same manner as described in Experimental Example 9. Next, the mice were imaged at each time points using an in vivo imaging system (IVIS), and the results are shown in
[0187] As shown in
[0188] As can be seen in Experimental Examples 1 to 10, it was confirmed that the CNC18 strain dies rapidly with a significantly decreased viability in all normal organs from the initial stage of infection while maintaining strong tumor-targeting ability, and exhibits excellent tumor treatment efficacy while minimizing side effects caused by infection in the host.
[0189] Although the present invention has been described in detail with reference to the specific features, it will be apparent to those skilled in the art that this description is only of a preferred embodiment thereof, and does not limit the scope of the present invention. Thus, the substantial scope of the present invention will be defined by the appended claims and equivalents thereto.
INDUSTRIAL APPLICABILITY
[0190] The present invention is directed to a Salmonella strain selectively acting on cancer and a composition for preventing or treating cancer containing the same.