MODULAR AND RAPID PCR DEVICE
20230372941 ยท 2023-11-23
Assignee
- BAHCESEHIR UNIVERSITESI (Istanbul, TR)
- MARMARA UNIVERSITESI REKTORLUGU OZEL KALEM BIRIMI (Istanbul, TR)
Inventors
- Mehmet Can ALPHAN (Istanbul, TR)
- Ibrahim Ertugrul YALCIN (Istanbul, TR)
- Lutfi ARDA (Istanbul, TR)
- Ibrahim Ilker OZYIGIT (Istanbul, TR)
Cpc classification
B01L2300/1805
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/0609
PERFORMING OPERATIONS; TRANSPORTING
B01L3/50851
PERFORMING OPERATIONS; TRANSPORTING
International classification
Abstract
A PCR device having a heating mechanism to subject samples to denaturation, annealing and extension processes is disclosed. The PCR device has a heating unit carrier having at least one first heating unit which provides heating of a first heating region at a first temperature for the denaturation process, at least one second heating unit which provides heating of a second heating region at a second temperature for the annealing process, at least one third heating unit which provides heating of a third heating region at a third temperature for the extension process; where the first heating unit, the second heating unit and the third heating unit are arranged in a first circular axis
Claims
1. A PCR device comprising a heating mechanism for subjecting samples to denaturation, annealing and extension processes, wherein the subject matter PCR device comprises: a heating unit carrier comprising: at least one first heating unit which provides heating of a first heating region at a first temperature for the denaturation process, at least one second heating unit which provides heating of a second heating region at a second temperature for the annealing process, at least one third heating unit which provides heating of a third heating region at a third temperature for the extension process; wherein said first heating unit, said second heating unit and said third heating unit are arranged in a first circular axis; and the PCR device comprises a sample carrier comprising at least one sample chamber placed in at least one point at a second circular axis which is parallel to said first circular axis; and the PCR device further comprises at least one movement mechanism which provides movement of the sample chamber between said first heating region, said second heating region and said third heating region.
2. The PCR device according to claim 1, wherein said heating unit carrier further comprises a holding unit provided in said first circular axis and which defines a holding region.
3. The PCR device according to claim 1, wherein the first heating unit, the second heating unit, and the third heating unit all comprise a first heating element and a second heating element positioned to define a heating region in between said first heating element and said second heating element.
4. The PCR device according to claim 1, wherein said sample carrier is in a plate form, and the heating unit carrier is in the plate form placed in a parallel manner to the sample carrier, and the movement mechanism is configured to move the sample carrier and/or heating unit carrier in an axis passing through the center of the sample carrier and/or heating unit carrier.
5. The PCR device according to claim 1, wherein said sample carrier is in cylindrical form, and said heating unit carrier is configured to telescopically engage with the sample carrier, and the movement mechanism is configured to move the sample carrier and/or heating unit carrier in an axis passing through the center of the sample carrier and/or heating unit carrier.
6. The PCR device according to claim 1, wherein said sample carrier is in hexagonal or octagonal prism form, and said heating unit carrier is in the form of a prism configured to telescopically engage with the sample carrier, and the movement mechanism is configured to move the sample carrier and/or heating unit carrier in an axis passing through the center of the sample carrier and/or heating unit carrier.
7. The PCR device according to claim 1, wherein the sample carrier comprises a plurality of sample chambers positioned in said second circular axis).
8. The PCR device according to claim 6, wherein the sample carrier comprises a plurality of sample chambers provided in the same number as the first heating unit, the second heating unit, and the third heating unit positioned in said second circular axis.
9. The PCR device according to claim 6, wherein a plurality of sample chambers are arranged in a manner annealing with the radian between the radian sequential heating units between the sequential sample chambers.
10. The PCR device according to claim 7, wherein the plurality of sample chambers are arranged in a manner annealing with the radian between the radian sequential heating units between the sequential sample chambers.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0023] In
[0024] In
[0025] In
[0026] In
DETAILED DESCRIPTION OF THE INVENTION
[0027] In this detailed description, the subject matter is explained with references to examples without forming any restrictive effect only in order to make the subject more understandable.
[0028] The present invention is a modular heating mechanism (10) which provides the placed samples to be subjected to denaturation, annealing and extension processes, and a PCR device comprising said heating mechanism (10). It essentially provides movement in a circular axis between the heating regions where the heaters, which provide realization of the denaturation, annealing and extension processes, provide heating.
[0029] With reference to
[0030] In more details, the heating unit carrier (100) comprises a first heating unit (111), a second heating unit (112) and a third heating unit (113) arranged in a first axis. In a possible embodiment of the present invention, the heating unit carrier (100) further comprises a holding unit (114). The heating units (110) emit heat for providing subjecting of the samples to denaturation, annealing and extension processes. The holding unit (114) provides keeping and/or holding of the samples in a holding region (134). The first heating unit (111) realizes in a manner that keeping a first heating region (131) at a first temperature. The second heating unit (112) realizes in a manner that keeping a second heating region (132) at a second temperature. The third heating unit (113) realizes in a manner that keeping a third heating region (133) at a third temperature. The heating units (110) can be associated with components like sensors, processors, etc. which control operation. Since the details of the heating units in PCR devices are well known in the related art, these details have not been given here.
[0031] The first temperature can be 94 degrees centigrade which is needed for denaturation, and the second temperature can be 50-60 degrees centigrade which is needed for annealing, and the third temperature can be 72 degrees centigrade which is needed for extension.
[0032] In a possible embodiment of the present invention, the heating units (110) can comprise a first heating element (121) and a second heating element (122) positioned in a manner defining a heating region in between.
[0033] The sample chambers (210) describe the mechanisms where the samples to be processed are placed in PCR device. There is at least one sample chamber (210) in a manner positioned in a second circular axis (22) which is parallel to the first circular axis (21) on the sample carrier (200).
[0034] A movement mechanism (not shown in the figures) provides movement of the heating unit carrier and/or chamber carrier in a manner visiting of a first heating region (131), a second heating region (132), a third heating region (133) and a holding region (134) by the sample chamber (210). The movement mechanism can comprise drive elements like motor and can be controlled by drivers.
[0035] In a possible embodiment of the present invention, the chamber carrier comprises three sample chambers (210). In a possible embodiment, the chamber carrier also comprises a holding chamber (211) provided for waiting. Said sample chambers (210) are arranged in the second circular axis (22) and are arranged at radians between the heating chambers and the sequential heating units. For instance, the heating units can be arranged at 90 degrees/pi radian intervals. In other words, the center angle through the center of the first circular axis (21) between two sequential heating units is 90 degrees. In other words, three heating units and a holding unit are placed to the first circular axis (21) with equal intervals. In this case, the sample cells are arranged through the center of the second axis such that the center angles in between are 90 degrees, in other words, such that the center angles in between are 90 degrees/pi radians. While a heating sample is in a heating region, all other sample chambers (210) are positioned in the remaining heating regions. Thus, the four samples are subjected to denaturation, annealing and extension processes simultaneously by using only three heating units.
[0036] With reference to
[0037] With reference to
[0038] The operation of the invention whose details are given above can be realized as given below. A sample is placed to one of the sample chambers (210). The chamber carrier or the heating unit carrier is moved such that the sample arrives at the first heating region (131). After a predetermined duration, the sample is placed to the sample chamber (210) which is positioned after the full sample chamber (210), and the heating unit carrier or the chamber carrier is moved such that the recently filled sample chamber (210) comes to the first heating region (131). In this arrangement, the other chambers are respectively filled, and when the firstly filled sample chamber (210) exits the third heating unit (113), said firstly filled sample chamber (210) can come to the first heating region (131) again, and thus, the cycle can be repeated at a desired number of times.
[0039] One of the sample carrier (200) and the heating unit carrier can be movable and other one can be fixed. While the movable one can have a body formed by cylindrical plate or arms, and the other one can be fixed to the body of the PCR device by means of various arms.
[0040] The protection scope of the present invention is set forth in the annexed claims and cannot be restricted to the illustrative disclosures given above, under the detailed description. It is because a person skilled in the relevant art can obviously produce similar embodiments under the light of the foregoing disclosures, without departing from the main principles of the present invention.
REFERENCE NUMBERS
[0041] 10 Heating mechanism [0042] 100 Heating unit carrier [0043] 110 Heating unit [0044] 111 First heating unit [0045] 112 Second heating unit [0046] 113 Third heating unit [0047] 114 Holding unit [0048] 121 First heating element [0049] 122 Second heating element [0050] 130 Heating region [0051] 131 First heating region [0052] 132 Second heating region [0053] 133 Third heating region [0054] 134 Holding region [0055] 200 Sample carrier [0056] 210 Sample chamber [0057] 211 Holding chamber [0058] 21 First circular axis [0059] 22 Second circular axis