Vaccine composition comprising cyclic peptides, antibodies to the cyclic peptides or an anticancer composition comprising the same
11291722 · 2022-04-05
Assignee
Inventors
Cpc classification
A61K39/395
HUMAN NECESSITIES
A61K39/001102
HUMAN NECESSITIES
A61K9/127
HUMAN NECESSITIES
A61K2039/55561
HUMAN NECESSITIES
C07K2317/24
CHEMISTRY; METALLURGY
C07K2317/73
CHEMISTRY; METALLURGY
A61K39/3955
HUMAN NECESSITIES
C07K2317/76
CHEMISTRY; METALLURGY
C07K16/28
CHEMISTRY; METALLURGY
G01N33/57492
PHYSICS
C07K2317/34
CHEMISTRY; METALLURGY
C07K2317/92
CHEMISTRY; METALLURGY
G01N2333/705
PHYSICS
International classification
A61K39/39
HUMAN NECESSITIES
C07K16/28
CHEMISTRY; METALLURGY
A61K39/395
HUMAN NECESSITIES
A61K9/127
HUMAN NECESSITIES
Abstract
The present invention relates to a vaccine composition comprising cyclic peptides of the present invention, antibodies to cyclic peptides, or an anticancer composition comprising them, and the vaccine composition of the present invention exhibit an inhibitory activity for metastasis of cancer. In addition, the antibodies of the present invention bind to the tumor-specific antigen TM4SF5 with high affinity, and significantly inhibit the growth, metastasis and invasion of cancer cells expressing the tumor-specific antigen TM4SF5, and thus can be used for diagnosis, prevention or treatment of various cancers expressing TM4SF5.
Claims
1. The antibody against peptides, said peptides comprising an amino acid sequence selected from the group consisting of SEQ ID NOS: 1 and 2 or peptides comprising an amino acid sequence selected from the group consisting of cyclic peptides linked by a disulfide bond between the 3rd cysteine amino acid and the 26th cysteine amino acid in sequences of SEQ ID NO: 1 or SEQ ID NO: 2, wherein said antibody comprises a heavy chain variable region having a heavy chain complementarity determining region (CDR) amino acid sequence of CDRH1 consisting of the sequence of SEQ ID NO: 3 or SEQ ID NO: 4 of the sequence listing, CDRH2 consisting of the sequence of SEQ ID NO: 5 or SEQ ID NO: 6 of the sequence listing, and CDRH3 consisting of the sequence of SEQ ID NO: 7 or SEQ ID NO: 8 of the sequence listing; and a light chain variable region having a light chain CDR amino acid sequence of CDRL1 consisting of the sequence of SEQ ID NO: 9 or SEQ ID NO: 10 of the sequence listing, CDRL2 consisting of SEQ ID NO: 11 or SEQ ID NO: 12 of the sequence listing and CDRL3 consisting of SEQ ID NO: 13 or SEQ ID NO: 14.
2. The antibody according to claim 1, characterized in that the heavy chain variable region has the amino acid sequence of SEQ ID NO:15 or SEQ ID NO:16.
3. The antibody according to claim 1, characterized in that the light chain variable region has the amino acid sequence of SEQ ID NO:17 or SEQ ID NO:18.
Description
BRIEF DESCRIPTION OF DRAWINGS
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BEST MODE FOR INVENTION
(18) Hereinafter, the present invention will be described in more detail with reference to Examples. It is will be self-evident to those skilled in the art that these Examples are only for illustrating the present invention in more detail and that the scope of the present invention is not limited by these Examples in accordance with the gist of the present invention.
Example 1
Synthesis of Cyclic Peptides of CpG-DNA and hTM4SF5EC2
(19) The natural CpG-DNA consisting of 20 bases with three CpG motifs, MB-ODN 4531 (O) (Kwon S, Kim D, Park B K, Cho S, Kim K D, Kim Y E, Park C S, Ahn H J, Seo J N, Choi K C, Kim D S, Lee Y, Kwon H J. PLoS One. 2012; 7(3):e331214) was received from Samchullypharm, Co, Ltd. MB-ODN 4531 is consisted of 20 bases with three CpG motifs: AGCAGCGTTCGTGTCGGCCT (SEQ ID NO: 23). The present inventors designed cyclic peptides (hTM4SF5EC2-C,
Example 2
Preparation of Liposome Complexes Co-Encapsulating Cyclic Peptides Epitope and CpG-DNA with TM4SF5 Targeting Peptides Vaccine
(20) Liposome complexes were consisted of TM4SF5 cyclic peptides (hTM4SF5EC2-C) and CpG-DNA co-encapsulated with DOPE:CHEMS (Lipoplex (O)), and were prepared as reported on Kwon S, Kim D, Park B K, Cho S, Kim K D, Kim Y E, Park C S, Ahn H J, Seo J N, Choi K C, Kim D S, Lee Y, Kwon H J. PLoS One. 2012; 7(3): e331214.
Example 3
Animals
(21) Female BALB/c mice and BALB/cAnNCri-nu/nu mice (4 weeks old) were purchased from Nara Biotech, Inc. and the mice were kept at 20-25° C. and 32-37% humidity under unspecified hospital conditions. All animal testing procedures were followed by the National Veterinary Research and Quarantine Service's Guide of Laboratory Animal Use Management and were performed under the approval of the Animal Experimentation Committee of Hallym University. We sacrificed mice under isoflurane inhalation and made every effort to minimize pain.
Example 4
Antigen-Specific Ig Enzyme-Linked Immunosorbent Assays (ELISA)
(22) Mice were sacrificed before and 10 days after each administration to obtain serum. To determine the total IgG titer and amount, a 96-well immunoplate (Nalgen Nunc International) was coated with 5 μg/ml hTM4SF5EC2-C cyclic peptide and blocked with 0.05% PBST containing 1% BSA for two hours. After removal of blocking solution, 100 μl of the culture supernatant was added and incubated for 2 hours at room temperature, then washed with PBST and incubated for 2 hours with the detection antibody such as horseradish peroxidase (HRP)-bound an anti-IgG antibody. Colorimetric assays were developed with TMB substrate solutions and absorbance was measured at 450 nm using a Spectra Max 250 microplate reader.
(23) To determine IgG isotype, 96-well immunoplates were coated with hTM4SF5EC2-C peptides, reacted with serum and incubated with HRP-conjugated anti-mouse IgG (each isotype) antibody (BD Biosciences).
Example 5
Evaluation of TM4SF5 Peptides Vaccine as Anti-Metastasis Agent in Lung Metastasis Model of Colorectal Cancer
(24) Liposome complexes composed of TM4SF5 cyclic peptides (hTM4SF5EC2-C) co-encapsulated with DOPE:CHEMS (Lipoplex (O)) comprising CpG-DNA were immunized three times at 10-day intervals in BALB/c mice. Control mice were injected with PBS or Lipoplex (O). For metastatic cancer animal experiments, mice were intravenously injected with CT-26 mouse colon cancer cell line (PBS control n=8, colon cancer cell group n=15) at 1×10.sup.5 cells at 30 days. Body weight was measured at 2-day intervals. On day 22 after CT-26 cell injection, the mice were sacrificed and the lung weight was measured.
Example 6
Investigation of Pulmonary Nodules
(25) BALB/c mice were immunized as above and injected with CT-26 cells. At twenty days after CT-26 cell injection, the mice were sacrificed, the cannula was inserted into the organs with a 20-gauge catheter and 1 ml of Indian ink (Parker, 1:16 diluted with PBS) was injected into the lungs. The lungs were extracted, soaked in Fekete's solution, decolored, and then counted for metastatic nodules (Larive R M, Moriggi G, Nat Commun. 2014; 5: 3881).
Example 7
Production of Mouse Monoclonal Antibodies Specific for TM4SF5
(26) HTM4SF5EC2-C cyclic peptides (.sup.131TACAYLLNRTLWDRCEAPPRVVPWNCT157) of the human TM4SF5 (hTM4SF5) proteins were prepared using an automated peptide synthesizer (Peptron III-R24, Peptron) in Peptron, Co., Ltd.
(27) Female BALB/c mice were intraperitoneally injected with hTM4SF5EC2-C cyclic peptides co-encapsulated with DOPE:CHEMS complex containing CpG-DNA four times at 10-day intervals. After splenocytes were obtained from the immunized spleen, they were fused with HAT-sensitive SP2/0 mouse myeloma cells under the presence of 40% (w/v) polyethylene glycol according to the standard hybridoma technique (Yokoyama W M, et al. Curr Protoc Immunol Chapter 2, Unit 2.5 (2006)). The culture supernatant of the hybridoma cells was tested by ELISA to confirm binding to hTM4SF5EC2-C cyclic peptides, and positive hybridoma groups were screened. ELISA-positive hybridoma cell lines were subcloned and then injected into the abdominal cavity of BALB/c mice to generate ascites. Anti-TM4SF5 monoclonal antibodies (mEC2-C) were purified from the ascites using protein A column chromatography (Amersham Pharmacia Biotech).
Example 8
SPR (Surface Plasmon Resonance) Analysis
(28) The affinities of anti-hTM4SF5 monoclonal antibody (mEC2-C) and humanized anti-TM4SF5 antibody (hEC2-C-2) binding to hTM4SF5EC2-C cyclic peptide were measured at 25° C. using the Reichert SPR system. Biotinylated peptides were captured from each flowing cell surface of a streptoavidin-coated sensor chip. Biotin was used as a negative control. Anti-hTM4SF5 monoclonal antibody (mEC2-C) and humanized anti-TM4SF5 antibody were injected at a flow rate of 30 ml/min. Data were evaluated using Reichert SPR evaluation software.
Example 9
Cell Culture
(29) Human HCC cell line such as Huh7, and human colon cancer cell lines such as HT-29 and HCT116, and mouse colon cancer cell line CT-26 were obtained from Korean Cell Line Bank. CT-26 cells were maintained in DMEM containing 10% fetal bovine serum (FBS; Hyclone), 2 mM glutamine, 100 U/ml penicillin and 100 ug/ml streptomycin. Other cell lines were maintained in RPMI 1640 medium containing 10% FBS, 25 mM HEPES, 100 U/ml penicillin and 100 ug/ml streptomycin. All cells were incubated at the temperature of 37° C. in 95% air and 5% CO.sub.2.
Example 10
Recombinant Human TM4SF5 Expression
(30) Human TM4SF5 cDNA was amplified by RT-PCR from Huh-7 mRNA using the following primer set: hTM4SF5 5′ primer, 5′-CTCGAGATGTGTACGGGAAAATGTGCC-3′ (SEQ ID NO: 24), hTM4SF5 3′ primer, 5′-AAGCTTTTGTGAGGTGTGTCCTGTTTTTT-3′ (SEQ ID NO: 25). The cDNA fragment was cloned into the expression vector pcDNA-3.1/Myc-His(−)B (Invitrogen). HEK 293F cells (1×10.sup.6 cells/ml) were transfected with 2.5 μg/ml hTM4SF5/pcDNA and 7.5 μg/ml polyethylenimine (PEI, Polysciences) for the production of stable cell lines expressing hTM4SF5, and the transfected cells were collected using 500 μg/ml G418 (Calbiochem) for 14 days. Expression of Myc-tagged hTM4SF5 was confirmed by Western blot analysis using anti-Myc-tag antibodies.
Example 11
Western Blot and Immunoprecipitation Analysis
(31) In order to analyze the specificity of anti-TM4SF5 monoclonal antibody and humanized anti-TM4SF5 antibody, TM4SF5-overexpressed cell lysates were separated on SDS-PAGE, and Western blot and immunoprecipitation assays were performed as described on Kwon S, Kim D, Rhee J W, Park J A, Kim D W, Kim D S, Lee Y, Kwon H J. BMC Biol. 2010; 8:23. In order to identify the expression of E-cadherin and β-catenin in humanized anti-TM4SF5 antibody-treated cells, cell lysates were analyzed with SDS-PAGE and Western blotting method as descried in Kwon S, Choi K C, Kim Y E, Ha Y W, Kim D, Park B K, Wu G, Kim D S, Lee Y, Kwon H J. Cancer Res. 2014; 74(14):3844-3856.
Example 12
Colon Cancer Mouse (Xenotransplantation) Model for Mouse Anti-TM4SF5 Monoclonal Antibody
(32) Twelve BALB/cAnNCri-nu/nu mice were subcutaneously injected with 5×10.sup.6 HT-29 cells containing 50% matrigel (BD biosciences) on the dorsal right flank. When the tumor diameter reached 5 mm, the mice were randomly sorted into two treatment groups (6 mice/each group) of PBS and anti-TM4SF5 monoclonal antibody (mEC2-C). Antibodies (25 mg/kg) were injected into the tail vein twice a week. During 30 days after injecting the cancer cell, the tumor diameter was measured per 3 or 4 day-interval, and the tumor volume was calculated according to an equation Width.sup.2×length/2. When the tumor size is reached ±600 mm.sup.3, BACB/cAnNCri-NCri-nu/nu mice were sacrificed, and the tumor weight was measured.
Example 13
Cloning of the Variable Heavy and Light Chains (Fabs) of Anti-TM4SF5 Monoclonal Antibody
(33) Hybridoma cells producing anti-TM4SF5 monoclonal antibodies (mEC2-C) were cultured, total RNAs were extracted from hybridoma cells, and cDNA were synthesized by reverse transcription. To clone the Fab sequence of anti-TM4SF5 monoclonal antibodies, the resulting cDNAs were amplified using Vent polymerase (NEB) and the following primers: Heavy chain primers, IGG3: GGAAGATCTAGGGACCAAGGGATAGACAGATGG, 5′MH2: CTTCCGGAATTCSARGTNMAGCTGSAGSAGTCWGG; Kappa chain primers, 3′Kc: GGTGCATGCGGATACAGTTGGTGCAGCATC, 5′Mk: GGGAGCTCGAYATTGTGMTSACMCARWCTMCA. Standard PCR reactions were performed for 25 cycles. The PCR product was ligated directly into the pGEM-T isotype vector (Promega). Cloned mouse Ig inserts were analyzed by DNA sequencing.
Example 14
Sequence Analysis and Molecular Modeling of Variable Fragment (Fv)
(34) Immunoglobulin variable domain sequences of mEC2-C were analyzed with IgBLAST (http://www.ncbi.nlm.nih.gov/igblast/)(Ye J, Ma N, Madden T L, Ostell J M. IgBLAST: Nucleic Acids Res. 2013; 41 (Web Server issue):W34-4027). Six complementarity determining regions (CDRs) were determined by Kabat numbering (Kabat E A, Wu T T. J Immunol. 1991; 147 (5): 1709-171928), and some framework (FR) residues of mEC2-C mAb were inserted as human VH3-Vk1 subfamily (in this case, the Herceptin framework). Three-dimensional structures of mouse and humanized EC2-C Fv amino acid sequences were simulated using a web modeling program, ROSIE (Lyskov S, Chou F C, Conchuir S O, Der B S, Drew K, Kuroda D, Xu J, Weitzner B D, Renfrew P D, Sripakdeevong P, Borgo B, Havranek J J, Kuhlman B, et al. PLoS One. 2013; 8(5):e6390629). This program identifies most homologous templates for heavy and light chain FRs and CDRs and combines this template structures into optimized models. As a result, the model structure was superimposed by ribbon model using Pymol software (DeLano Scientific LLC).
Example 15
Construction of Humanized Antibodies Against EC2-C Peptides Antigens Determination of CDRs of Non-Human (Mouse) Derived Antibodies
(35) For humanization, it is first necessary to determine the CDRs of the antibodies. Methods for determining CDRs include Kabat numbering based on the diversity of amino acid sequences, Chothia numbering based on the structure of the loop region (James et al., January; 42: D1140-6, 2014) IMGT numbering based on the high degree of conservation of variable region structures (Lefranc M P et al., Front Immunol., 5; 5: 22, 2001), etc., and Kabat numbering is most widely used. CDRs of mouse-derived antibodies to the EC2-C peptide antigens were determined according to Kabat numbering (see
(36) Selection of Human Antibodies Framework Suitable for Construction of Humanized Antibodies and CDR Region Transplantation of Wild Type Antibodies
(37) The variable regions of human antibody are broadly classified according to the amino acid sequence into 7 subtypes (VH1, VH2, VH3, VH4, VH5, VH6, VH7) for the heavy chain and 17 subtypes (κ1,κ2,κ3,κ4,κ5,κ6,λ1,λ2,λ3,λ4,λ5,λ6,λ7,λ8,λ9,λ10,λ11) for the light chain. Because each subtype has a different amino acid sequence, it has a different biologic structure and thus has a different stability, and thus the frequency used in natural human antibodies repertoire also varies (Tiller T et al., MAbs, 5(3):445-70, 2013). Generally, when humanized antibodies are prepared using CDR grafting method, in order to maintain the structure of CDR as much as possible, while they are transferred to a human framework having high sequence homology with wild type non-human derived antibodies, in this case, the subtypes of humanized antibodies is naturally stable, but there is a possibility that antibodies with low stability can be obtained after humanization.
(38) In order to determine the human framework suitable for the humanization of the mouse-derived antibody to the hTM4SF5EC2-C peptide antigen, we searched subtypes of the variable regions of human antibody with the most high sequence homology to the existing wild type antibody through Igblast (URL: http://www.ncbi.nlm.nih.gov/igblast/) and as a result, found that they have the most homology with subtypes of VH4 and Vk4 of human antibody. However, according to the reference, each of the above two subtypes is very low on frequency and stability which are found in naturally occurring human antibody repertoires. Therefore, in order to construct a highly stable humanized antibody while maintaining the affinity for the antigen and its function, an antigen binding site was transplanted into the human antibodies framework of the VH3-Vk1 subtype. The VH3-Vk1 subtype is the framework of a commercialized therapeutic antibody (Herceptin), and its thermodynamic stability and expression yield have been well verified by previous studies and in particular, have been used successfully for the humanization of various mouse antibodies (Carter et al., Proc Natl Acad Sci USA 89:4285-4289 1992; Presta et al., Cancer Res 57:4593-4599 1997).
(39) Selection of Additional Conservative Amino Acids for Maintaining Transplantation of CDR Site Transplantation and Affinity of Wild Type Mouse Antibodies
(40) As mentioned earlier, since the humanized antibodies constructed by simple CDR transplantation method often occasionally decrease in function when compared to wild-type non-human derived antibodies, humanization of the EC2-C peptides antigens was proceed with two clones, a clone (hEC2-C-1) transplanted with simply CDR to decrease the immunogenicity problem and a clone (hEC2-C-2) additionally reverse-substituting the amino acids located in the Vernier zone which is located in the framework of the antibody and can affect the CDR loop structure, simultaneously CDR transplantation. In the Vernier region, there are 30 amino acids, 16 in the variable heavy chain region, and 14 in the variable light chain region. Through the sequence analysis between the wild type mouse antibodies and the selected VH3-Vk1 human antibodies framework subtypes, it was confirmed that nine (28, 29, 30, 48, 49, 67, 71, 73, and 93) in the variable heavy chain region and two (49, 66) amino acids in the variable light chain region of the amino acid sequences of the Vernier region were different (See
(41) The base and amino acid sequences of the human VH3-Vk1 subtype for sequence analysis were those of commercialized antibodies, Herceptin, with a framework of the above subtype and no significant problems in immunogenicity or expression amount.
(42) In addition to the Vernier zone, the VH/VL interface amino acids affecting the stability are regions that affect the overall stability of the antibodies by stabilizing the binding of the variable heavy and light chain sites, since the residues thereof are directed to the interior rather than to the surface of the antibodies, and thus, for these reason, most antibodies are made up of identical amino acid residues. In the case of the above antibodies, the amino acid residues of the existing mouse antibody and human antibody were confirmed to be identical, and it was considered that they would not have a great influence upon humanization, so that no modification was made.
(43) The nucleotide sequence and amino acid sequence of the heavy chain variable region of the constructed anti-hTM4SF5EC2-C humanized antibodies are shown in SEQ ID NOs: 20 and 16, respectively, and the nucleotide sequence and amino acid sequence of the light chain variable region are shown in SEQ ID NOs: 22 and 18, respectively. The clones for constructing the above humanized antibodies were analyzed amino acid sequences as well as structural data analysis through computer modeling. First, the variable region sequence of candidate clones and wild-type mouse antibodies primarily obtained through amino acid sequence analysis were input on an online server (URL: http://rosie.rosettacommons.org/; Lyskov S et al., PLosOne, (5): e63906, 2013), respectively, to obtain predicted structures. Each structure obtained was superimposed using Pymol software which can view the structure of the protein to observe structural changes in the CDR loop.
Example 16
Construction and Expression of Humanized hEC2-C Antibody
(44) To obtain humanized IgG1 Ab with intact IgG format, VH and Vk coding genes were synthesized to contain restriction enzyme sites at both the 5′ and 3′ ends (Bioneer, Korea). These genes were inserted into a modified pcDNA 3.4 expression vector (Invitrogen) carrying human IgG1 constant site (CH1-hinge-CH2-CH3) or human kappa chain constant site (CL) for mammalian cell expression in HEK 293F cells. The humanized EC2-C mAb was produced with HEK 293F expression system as described on Choi H J, Kim Y J, Lee S, Kim Y S. Mol Cancer Ther. 2013; 12 (12): 2748-2759 and Choi D K, Bae J, Shin S M, Shin J Y, Kim S, Kim Y S. MAbs. 2014; 6 (6): 1402-1414, and cultured for 5-7 days, and then purified using Protein A affinity chromatography according to the manufacturer's protocol. Mouse parental and humanized antibodies were evaluated for their purity by SDS-PAGE analysis.
Example 17
Production of IgG-Type Humanized Antibody Gene
(45) The base sequence of designed humanized antibodies follows the base sequence of the commercialized high yield therapeutic antibody, Herceptin, but the other parts were converted into the base sequences upon considering the frequency of use of the codons (Sequences of Proteins of Immunological Interest, US Dept. Health and Human Services, 1991), and then a base sequence encoding the amino acid sequence of the heavy chain variable region and the light chain variable region of humanized antibodies was designed. The designed sequences were synthesized by introducing restriction enzyme recognition sequences for cloning into animal cell expression vectors at both 5′ and 3′ ends (Bioneer, Korea). The synthesized gene could be in the state cloned into the basic vector, pBHA vector, provided by Bioneer Co., and in order to express it in the complete IgG form, it was cloned using a restriction enzyme recognition sequence which was introduced into an animal expression vector containing a heavy chain constant region and a light chain constant region, respectively, at the time of synthesis. At this time, the amino acid and base sequence of the constant region of the heavy chain and the light chain likewise follow the nucleotide sequence of the therapeutic antibody, Herceptin.
(46) Expression 18: Expression and Purification of Antibody
(47) Expression of the constructed anti-hTM4SF5EC2-C humanized antibodies was performed by transient transfecting a mixture of light chain, heavy chain expression vector and polyethylenimine (PEI) (Polyscience) into HEK293-F cells (Invitrogen) and culturing it in a shaking flask with serum-free FreeStyle 293 expression medium (Invitrogen). The detailed process is as follows:
(48) At 200 mL transfection in shaking flasks (Corning), HEK293-F cells were seeded in 100 ml medium at a density of 2.0×10.sup.6 cells/ml and cultured at 150 rpm, 8% CO.sub.2. The resulting heavy and light chain plasmids were diluted to a total of 250 μg (2.5 μg/ml) with 125 μg heavy chain and 125 μg light chain in 10 ml FreeStyle 293 expression medium (Invitrogen) to produce each humanized antibody, 750 μg PEI (7.5 μg/ml) were mixed with 10 ml of the diluted medium to make them react at room temperature for 10 minutes.
(49) Then, the reacted mixing medium was added to 100 ml of seeded cells and cultured for 4 hours at 150 rpm and 8% CO.sup.2, and then, the remaining 100 ml of FreeStyle 293 expression medium was added and cultured for 5 days to 7 days, and finally the protein produced by the cell, that is, the humanized antibody in IgG form, was secreted outside the cell by the cell and accumulated in the medium. Due to this, the humanized antibody was purified using Protein A Sepharose column (GE healthcare) from the cell culture supernatant obtained by centrifuging at 2500 rpm for 20 minutes. At this time, the purification method referred to the standard protocol provided by Protein A column company, the purified protein was measured by absorbance at 562 nm wavelength using a solution in BCA protein assay kit (Thermo) and quantified for the amounts according to the standard curve. The size and purity of the purified antibody were analyzed by reductive SDS-PAGE. As shown in
Example 19
Confocal Image
(50) To identify the effect of humanized anti-TM4SF5 antibody on E-cadherin and β-catenin expression, CT-26 cells and HCT-116 cells were cultured and treated with control IgG or humanized anti-TM4SF5 antibodies (10 ug/ml). After 3 days, expression of E-cadherin and β-catenin in the cells was analyzed according to Kim Y E, Kwon S, Wu G, Kim D, Park B K, Park J A, Choi K C, Kim D S, Kwon H J, Lee Y. Oncotarget. 2014; 5(18):8402-8415.
Example 20
In Vitro Cell Migration Assay
(51) A trans-well chamber (Corning Costar) with 8 μm pores was used for the analysis. For migration analysis, the lower side of the trans-well chamber membrane was coated with 10 μg/ml of gelatin. The colonic cells (1×10.sup.5 cells/ml) were suspended in serum-free medium containing human IgG control or humanized anti-TM4SF5 antibodies (hEC2-C-2 Ab), and dispensed at the top of the trans-well. RPMI medium containing 10% FBS was placed in the lower chamber. Cells migrating through the pore were placed on the lower surface of the filter, fixed after 24 hours, stained with crystal violet for 30 minutes, and then the number of cells was counted with a microscope (Eclipse E-200, Nikon).
Example 21
In Vitro Wound-Healing Analysis
(52) For wound healing analysis, 1×10.sup.6 cells (Huh-7, and CT-26) were dispensed into 6-well plates, incubated overnight in serum-containing medium, and wounded into a single layer using a pipette tip. PBS, human IgG control, or humanized anti-TM4SF5 antibody (hEC2-C-2 Ab) (10 ug/ml) was added to the medium. At the indicated time points, the cells were fixed with 4% paraformaldehyde for 30 minutes and stained with hematoxylin for 30 minutes. The number of cells transferred to the wound site was counted in three wells per experiment treatment and three wounds per each well.
Example 22
Liver Cancer Mouse Model
(53) 5×10.sup.6 Huh-7 cells containing 50% BD biosciences were subcutaneously injected into the dorsal right flank of 12 BALB/cAnNCri-nu/nu mice. When the tumor diameter reached 5 mm, the mice were randomly sorted into two treatment groups (6 mice/each group) of PBS and humanized anti-TM4SF5 antibody (hEC2-C-2 Ab). Antibody (25 mg/kg) were injected into the tail vein twice a week. Tumor diameters were measured at intervals of 4 days for 44 days after the injection of cancer cells, and the tumor volume was calculated according to the equation of width.sup.2×length/2. BALB/cAnNCri-nu/nu mice were sacrificed when tumor size reached 2000 mm.sup.3; and tumor weights were measured.
Example 23
Colon Cancer Mouse Models for Humanized Anti-TM4SF5 Antibodies (Xenotransplantation)
(54) Twelve BALB/cAnNCri-nu/nu mice were subcutaneously injected with 5×10.sup.6 HT-29 cells containing 50% BD biosciences on the dorsal right flank. When the tumor diameter reached 5 mm, the mice were randomly sorted into two treatment groups (6 mice/each group) of PBS and humanized anti-TM4SF5 monoclonal antibody (mEC2-C). Antibody (25 mg/kg) were injected into the tail vein twice a week. Tumor diameters were measured at intervals of 3 or 4 days for 30 days after the injection of cancer cells, and the tumor volume was calculated according to the equation of width.sup.2×length/2. BALB/cAnNCri-nu/nu mice were sacrificed when tumor size reached 800 mm.sup.3; and tumor weights were measured.
Example 24
Evaluation of Humanized Anti-TM4SF5 Antibodies as Anti-Metastatic Agents in a Lung Metastasis Model of Colorectal Cancer
(55) BALB/c mice were injected into the tail vein with 1×10.sup.5 cells of mouse CT-26 colon cancer cell line (PBS control n=8, colorectal cancer cells n=36). On day 1, the cancer cell injected mice were divided into three treatment groups (n=12/each group) such as PBS, human IgG control and humanized anti-TM4SF5 antibody (hEC2-C-2 Ab). Antibody (25 mg/kg) was injected into the tail vein twice a week and body weights were measured at 2-day intervals. Survival of the mice was monitored for up to 22 days (
(56) Another experiment with the same settings was prepared to investigate the status of the lungs (n=12/each group). On day 19, the mice were sacrificed and the lungs were weighed (
Example 25
Histology
(57) For histopathological examination, tumors and lungs were removed, fixed overnight in 4% formalin solution, embedded in paraffin, and cut into 5 5 μm thick sections. The deparaffinized sections were stained with H&E (hematoxylin and eosin). Samples were then counter-stained with hematoxylin and all images were examined using a Nikon Eclipse E-200 microscope (Nikon).
(58) The results of the above example are as follows.
(59) Immunization with TM4SF5 Peptide Vaccine and Production of Antibodies Specific to Cyclic Peptides of TM4SF5 (
(60) To obtain antibodies that recognize structural epitopes while maintaining tight binding, the inventors have designed a structural motif of cyclic peptides that mimic TM4SF5 extracellular domain 2 (EC2). As shown in
(61) Inhibition of Growth of Colon Tumors by Immunization with M4SF5 Peptide Vaccine in Mouse Lung Metastasis Model (
(62) To evaluate the importance of TM4SF5 as a target to control the metastasis of colon cancer in mice, the inventors first immunized BALB/c mice with TM4SF5 peptide vaccine consisting of cyclic TM4SF5 peptides (hTM4SF5EC2-C) and Lipoplex (O). Then, the effect of the TM4SF5 peptide vaccine was determined on the growth of pulmonary tumors induced by injection of CT-26 cells (
(63) Generation of Monoclonal Antibodies Specific to TM4SF5 Cyclic Peptides
(64) The titration curves of the antibodies against cyclic TM4SF5 peptides (hTM4SF5EC2-C) in mouse serum were obtained by ELISA after four immunizations with liposome complex containing DOPE:CHEMS co-encapsulating hTM4SF5EC2-C peptides and CpG-DNA. (
(65) The hybridoma cells were subjected to subcloning by the limiting dilution method to analyze the production of monoclonal antibodies (
(66) Property of Monoclonal Antibodies Specific for TM4SF5 Cyclic Peptides
(67) The inventors successfully screened hybridoma cell line (2A10) and successfully isolated monoclonal antibodies that recognize hTM4SF5EC2-C peptides. Anti-TM4SF5 monoclonal antibodies (mEC2-C) were purified from multiple liquids by protein A column chromatography and their purity was determined to be 99% or more (
(68) Anti-TM4SF5 Monoclonal Antibodies (mEC2-C) Inhibit the Growth of Colon Cancer in a Xenograft Mouse Model
(69) The inventors observed the effect of TM4SF5-targeted monoclonal antibodies on the growth of in vivo colon cancer cells using a xenograft mouse model. First, the inventors injected HT-29 cells subcutaneously on the back of the nude mice to grow tumors. When the tumor size reached a diameter of 5 mm, the inventors injected anti-TM4SF5 monoclonal antibodies (mEC2-C) into the tail vein twice a week. Based on tumor volume and weight, anti-TM4SF5 monoclonal antibody (mEC2-C) attenuated progression of colon cancer compared to PBS control (
(70) Cloning of Variable Domains of Anti-TM4SF5 Monoclonal Antibody
(71) CDNA sequences encoding the heavy and light chain variable domains (V.sub.H and V.sub.L) were cloned from hybridoma cells (mEC2-C) producing anti-TM4SF5 monoclonal antibodies using conventional heavy and light chain primers. Sequences identified by DNA sequencing are shown in
(72) Production and Property of Humanized Monoclonal Antibodies
(73) For the clinical application of monoclonal antibodies, the antibodies should be humanized to reduce immunogenicity in humans Therefore, the present inventors analyzed immunoglobulin variable domain sequences of the obtained monoclonal antibodies mEC2-C using the IgBLAST program (Ye J, Ma N, Madden T L, Ostell J M. IgBLAST: Nucleic Acids Res. 2013; 41 (Web Server issue):W34-40), and found that the variable domain subtype belongs to mouse VH2-Vk8. For the humanization of mEC2-C mAb, the inventors have found that the VH3-Vk1 framework was selected by referring to the fact that the framework is most commonly observed in the human germ line repertoire (Caravella J A, Wang D, Glaser S M, Lugovskoy A. Curr Comput Aided Drug Des. 2010; 6 (2): 128-138). The inventors have grafted some framework sequences, in this case, Herceptin framework and CDR region into VH3-Vk1 framework in a well-established manner (Kabat E A, Wu T T. J Immunol. 1991; 147(5):1709-1719). The structures derived from mEC2-2 and humanized monoclonal antibody (hEC2-C-2) were modeled and compared, indicating that they are not identical to each other, but are similar to each other (
(74) Therefore, the present inventors can conclude that the humanized antibody is fully responsive to the TM4SF5 protein and has a higher affinity compared to the original monoclonal antibody.
(75) Effects of Humanized Anti-TM4SF5 Antibodies on β-Catenin Expression and Migration of Colon Cancer Cells
(76) TM4SF5 activates integrin-mediated signaling pathways critical for tumor cell metastasis and cell migration/invasion (Lee S A, Kim T Y, Kwak T K, Kim H, Kim S, Lee H J, Kim S H, Park K H, Kim H J, Cho M, Lee J W. J Cell Biochem. 2010; 111(1):59-66; Jung O, Choi S, Jang S B, Lee S A, Lim S T, Choi Y J, Kim H J, Kim D H, Kwak T K, Kim H, Kang M, Lee M S, Park S Y, et al. J Cell Sci. 2012; 125 (Pt 24):5960-5973). Therefore, the inventors evaluated the in vitro effect of humanized anti-TM4SF5 antibody on cell migration using CT-26 cells and HCT-116 cells. As shown in
(77) In order to examine the effect of anti-TM4SF5 antibody on the cell interaction characteristics, the inventors checked the expression of E-cadherin and β-catenin in CT-26 cells and HCT-116 cells (
(78) Humanized Anti-TM4SF5 Antibody Inhibits HCC Tumor Growth in a Xenograft Mouse Model
(79) The inventors investigated the effect of TM4SF5-targeted humanized antibody on the growth of HCC cells using a xenograft mouse model. First, the inventors injected Huh-7 cells subcutaneously into the back of the mouse to grow tumors. When the tumor size reached a diameter of 5 mm, the inventors administered PBS or humanized anti-TM4SF5 antibody to the tail vein twice a week. According to tumor volume and weight, humanized anti-TM4SF5 antibody attenuated the progression of HCC tumors when compared to PBS controls (
(80) Humanized Anti-TM4SF5 Antibody Inhibit Colon Cancer Growth in Xenotransplantation Mouse Models
(81) The inventors observed the effect of TM4SF5-targeted humanized antibody on the growth of in vivo colon cancer cells using a xenograft mouse model. First, the inventors injected HT-29 cells subcutaneously on the back of the nude mice to grow tumors. When the tumor size reached a diameter of 5 mm, the inventors administered PBS or humanized anti-TM4SF5 antibody twice a week into the tail vein. According to tumor volume and weight, humanized anti-TM4SF5 antibody attenuated the progression of colon tumors compared to PBS controls (
(82) Humanized Anti-TM4SF5 Antibody Inhibits the Growth of Colon Tumors in the Mouse Lung Metastasis Model
(83) It can be hypothesized that an immunization-induced TM4SF5-specific antibody directly contributes to the anti-metastatic effect, since immunization of mice with the TM4SF5 peptide vaccine inhibits the growth of lung tumor tissue by injection of CT-26 cells.
(84) Thus, we next examined the effect of humanized anti-TM4SF5 antibody on lung metastasis according to the experimental schedule as shown in
(85) In order to confirm the anti-metastatic effect of humanized anti-TM4SF5 antibody, the inventors repeated similar experiments and checked lung metastasis. Mice injected with humanized antibody hEC2-C-2 significantly reduced the formation and growth of pulmonary metastatic tumors compared to PBS controls (