Microbial bioconversion of curcuminoids to calebin-A
11299706 · 2022-04-12
Assignee
Inventors
- Muhammed Majeed (Bangalore, IN)
- Kalyanam Nagabhushanam (East Windsor, NJ)
- Anju Majeed (East Windsor, NJ)
- Nooruddin Thajuddin (Tiruchirapalli, IN)
- Sivakumar Arumugam (Bangalore, IN)
- Krishnamurthy Kulithalai Viswanathan (Bangalore, IN)
- Samuel Thomas Manoharan (Bangalore, IN)
- Furqan Ali (Bangalore, IN)
- John Adams Sebastian (Bangalore, IN)
- Jamsheeda Moothedath (Bangalore, IN)
- Muthuraman Gnanamani (Bangalore, IN)
- Kirankumar Beede (Bangalore, IN)
Cpc classification
A61K31/216
HUMAN NECESSITIES
A61K36/9066
HUMAN NECESSITIES
International classification
A61K36/9066
HUMAN NECESSITIES
Abstract
The present invention discloses a novel endophytic fungi, Ovatospora brasiliensis MTCC 25236 for the bioconversion of curcuminoids to Calebin-A and a method for its isolation from the rhizomes of Curcuma sp. The invention also discloses a method for the bioconversion of curcuminoids to Calebin-A using an endophytic fungi Ovatospora brasiliensis MTCC 25236 and bacterial species, Acinetobacter johnsonii and Pseudomonas putida.
Claims
1. A method for the bioconversion of curcuminoids to Calebin-A using fungal or bacterial species, said method comprising steps of: i. culturing the fungal or bacterial species in main two batches (flasks containing batch 1 and flasks containing batch 2) in 50 ml-500 ml volumes of suitable media and incubating at 35-37° C. with shaking at 100-120 rpm for 1 to 21 days; ii. on the 7.sup.th day of incubation, adding varying concentrations of curcuminoids to batch 1 flasks of step i) and incubating at 37° C. with 120 rpm shaking; iii. maintaining the batch 2 flasks of step i) without adding curcuminoids at 37° C. with 120 rpm shaking; iv. harvesting media from batch 1 and batch 2 flasks of step ii) and step iii) after 24, 48, 72, 96, 120 hrs; v. drying the harvested media of step iv) under vacuum and extracting using a suitable solvent; vi. identifying the presence of Calebin-A using HPLC (high performance liquid chromatography), LC-MS (liquid chromatography-mass spectrometry) and NMR (nuclear magnetic resonance); vii. refluxing the harvested media of step iv) with a suitable solvent followed by separating and drying the solvent layer under vacuum; and viii. identifying the presence of Calebin-A using HPTLC, HPLC, LC-MS and NMR, wherein the fungal species is Ovatospora brasiliensis MTCC 25236, and the bacterial species is Acinetobacter johnsonii NCIMB 9871 or Pseudomonas putida NCIMB 10007.
2. The method as in claim 1, wherein the media of step i) is selected from the group consisting of potato dextrose broth (PDB), Sabouraud Dextrose Broth, Malt Extract Broth, and Czapek Dox Broth.
3. The method as in claim 1, wherein the solvent of step v) and vii) is selected from the group consisting of ethyl acetate, methanol, hexane, ethanol, and acetone.
4. The method as in claim 1, wherein the solvent of step v) and vii) is ethyl acetate and methanol.
Description
BRIEF DESCRIPTION OF DRAWINGS
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DESCRIPTION OF PREFERRED EMBODIMENTS
(14) In a preferred embodiment, the invention discloses a method for the bioconversion of curcuminoids to Calebin-A using micro-organisms, said method comprising steps of: i) Culturing the micro-organisms in two batches (batch 1 and batch 2) in 50 ml-500 ml volumes of suitable media and incubating at 35-37° C. with shaking at 100-120 rpm for 1 to 21 days; ii) After 7 days of incubation addition of varying concentrations of curcuminoids to batch 1 flasks of step i) and incubating at 37° C. with 120 rpm shaking; iii) Maintaining the batch 2 flasks of step i) without adding curcuminods at 37° C. with 120 rpm shaking; iv) Harvesting the broth from batch 1 and batch 2 flasks of step ii) and step iii) after 24, 48, 72, 96, 120 hrs. v) Drying the harvested sample of step iv) under vacuum and extracting using a suitable solvent; vi) Identifying the presence of Calebin-A using HPTLC, HPLC, LC-MS and NMR. vii) Refluxing the harvested sample of step iv) with a suitable solvent followed by separating and drying the solvent layer under vacuum; viii) Identifying the presence of Calebin-A using HPTLC, HPLC, LC-MS and NMR.
(15) In a related embodiment, the micro-organisms are selected from the group consisting of fungal and bacterial species. In another related embodiment, the fungus preferably belongs to the genus Chaetomium and Ovatospora. In another related aspect, the fungus is most preferably Ovatospora brasiliensis MTCC 25236. In another related aspect, the bacterial are selected from the group comprising Acinetobacter calcoaceticus or Acinetobacter johnsonii Dietzia maris, Pseudomonas putida and Rhodococcus ruber. In another related aspect, the bacterial species are preferably Acinetobacter johnsonii and Pseudomonas putida. In another related aspect, the media of step i) is selected from the group comprising, but not limited to, potato dextrose broth (PDB), Sabouraud Dextrose Broth. Malt Extract Broth and Czapek Dox Broth. In another related aspect, the solvent of step v) and vii) is selected from the group comprising ethyl acetate, methanol, hexane, ethanol, acetone. In another related aspect, the solvent of step v) and vii) is preferably ethyl acetate and methanol.
(16) In another preferred embodiment, the invention discloses a method for the isolation and identification of endophytic fungal strain for the bioconversion of curcuminoids to calebin, said method comprising steps of: i) Washing the rhizomes of Curcuma sp., thoroughly followed by surface sterilization using 70% ethanol for 1 minute and immersing in 0.25% mercuric chloride solution for 30 seconds to 1 minute ii) Rinsing in sterile distilled water for 1 minute and inoculating the rhizome in a plate containing potato dextrose agar supplemented with antibiotic Tetracycline and incubated at 28±10° C. for 5 to 7 days; iii) Transferring the pure colonies on a slant and broth containing potato dextrose iv) Preserving the fungal strains in the pure culture on potato dextrose agar (PDA) slant at 4 to 5° C. with proper labeling and with constant sub-culturing v) Identifying the fungal species using biochemical, microscopic and molecular methods.
(17) In another related embodiment, the fungus preferably belongs to the genus Chaetomium and Ovatospora. In another related aspect, the fungus is most preferably Ovatospora brasiliensis MTCC 25236. In another related aspect, the Curcuma sp. is preferably Curcuma caesia.
(18) In another preferred embodiment, the invention discloses an inoculum containing an endophytic fungal strain, isolated from the rhizomes of Curcuma sp., for use in the bioconversion of curcuminoids to Calebin-A. In another related embodiment, the fungus preferably belongs to the genus Chaetomium or Ovatospora. In another related aspect, the fungus is most preferably Ovatospora brasiliensis MTCC 25236. In another related aspect, the Curcuma sp. is preferably Curcuma caesia.
(19) The invention is best described by the following illustrative examples:
Example 1: Isolation, Identification and Characterization of Endophytic Fungus
(20) Isolation of Endophytic Fungi
(21) Curcuma caesia rhizomes were harvested at proper time and the well grown and non infected rhizomes were selected for the isolation of endophytic fungus. The processed rhizomes were washed in running water to remove all outer sand particles and then dried with tissue paper prior to the soaking in the 70% alcohol treatment for 1 min and then in the 5.3% Sodium hypochlorite for 5 min. Finally the rhizomes were soaked in 0.25% of Mercuric chloride (HgCl.sub.2) for 30 seconds and rinsed in distilled water for 1 minute and sliced both horizontally and vertically. The sliced rhizome pieces were carefully placed in the petri-dishes containing PDA medium with 0.5% w/v chloramphenicol. The Petri-dishes of inoculated rhizomes were then incubated at 28° C.-32° C. for 7 to 14 days with regular monitoring for its purity.
(22) Screening and Identification of Endophytic Fungus
(23) The grown culture was separated out for its pure subculture, which was subjected to the microscopic identification. The microscopic identification was done by taking the pure culture mounted on the glass slide and observed the various characters under the microscope Nikon Eclipse Ci, (Made in Japan) (Dugan, 2006). Photographic images were captured using Nikon DS Ri2 attached to a Nikon Eclipse Ci microscope. The images were processed on Nikon Basic Essential software.
(24) Fungal DNA Extraction and Sequencing
(25) DNA was isolated from the endophytic isolate and the quality of DNA was evaluated on 1.0% Agarose Gel. A single band of high-molecular weight DNA was observed (
(26) TABLE-US-00001 SEQ ID 1 NS1- 5′-GTAGTCATATGCTTGTCTC-3′ SEQ ID 2 NS4- 5′-CTTCCGTCAATTCCTTTAAG-3′
(27) A single discrete PCR amplicon band of ˜500 bp was observed when resolved on agarose (
(28) Results
(29) The fungal 18S rDNA was sequenced and the sequence information (SEQ ID 3) was obtained as below:
(30) TABLE-US-00002 5′ AGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAG GGATCATTAAAGAGTTGCAAAACTCCCTAAACCATTGTGAACCTACCTT CAACCGTTGCTTCGGCGGGTTGGCACCGGGTCTCCCGGCGCCCCCGGCC CCCTCGCGGGGCGGCCCGCCGGAGGTACCTAACTCTTGAACATTGTATG GCCTCTCTGAGTCTTCTGTACTGAATAAGTCAAAACTTTCAACAACGGA TCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAA TGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGC GCCCGCCAGTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCA TCAAGCCCCGGGCTTGTGTTGGGGACCTGCGGCTGCCGCAGGCCCTGAA ATGCAGTGGCGGGCTCGCTGTCACACCGAGCGTAGTAGCATTATCTCGC TCTGGGCGTGCTGCGTGTCCCGGCCGTAAAACGACCTTACACCCAAGGT TGACCTCGGATCAGGTAGGAAGACCCGCTGAACTTAAGCATATCAA 3′
(31) The endophytic fungus which was labelled as Endophytic Fungus EPE 10 showed high similarity with Ovatospora brasiliensis based on nucleotide homology (Table 1) and phylogenetic analysis (
(32) TABLE-US-00003 TABLE 1 Alignment view using combination of NCBI GenBank - Distribution of 10 Blast Hits on the Query Sequence Max Total Query E Description score score cover value Ident Accession Ovatospora brasiliensis 1075 1075 100% 0 100.00% MH858514.1 strain CBS 122.65 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Chaetomium fuscum strain 1068 1068 99% 0 99.83% MH856572.1 CBS 140.50 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora mollicella strain 1064 1064 98% 0 100.00% MH861854.1 CBS 101.85 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene partial sequence Ovatospora brasiliensis 1051 1051 97% 0 100.00% MH860313.1 strain CBS 728.71 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora brasiliensis 1051 1051 98% 0 99.83% MH860268.1 strain CBS 578.71 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora brasiliensis 1050 1050 97% 0 100.00% MH860712.1 strain CBS 391.73 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora brasiliensis 1046 1046 97% 0 100.00% MH860888.1 strain CBS 690.74 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora brasiliensis 1046 1046 98% 0 99.65% MH860547.1 strain CBS 507.72 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1. 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora mollicella strain 1044 1044 97% 0 99.82% MH861659.1 CBS 583.83 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence Ovatospora brasiliensis 996 996 92% 0 100.00% MH865522.1 strain CBS 130174 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence
(33) TABLE-US-00004 TABLE 2 Estimates of Evolutionary Divergence between Sequences using phylogenetic analysis Endophytic 0.000 0.000 0.000 0.000 0.002 0.000 0.000 0.003 0.002 0.000 Fungus EPE 10 MH858514.1 0.000 0.000 0.000 0.000 0.002 0.000 0.000 0.003 0.002 0.000 MH856572.1 0.000 0.000 0.000 0.000 0.002 0.000 0.000 0.003 0.002 0.000 MH861854.1 0.000 0.000 0.000 0.000 0.002 0.000 0.000 0.003 0.002 0.000 MH860313.1 0.000 0.000 0.000 0.000 0.002 0.000 0.000 0.003 0.002 0.000 MH860268.1 0.002 0.002 0.002 0.002 0.002 0.002 0.002 0.002 0.003 0.002 MH860712.1 0.000 0.000 0.000 0.000 0.000 0.002 0.000 0.003 0.002 0.000 MH860888.1 0.000 0.000 0.000 0.000 0.000 0.002 0.000 0.003 0.002 0.000 MH860547.1 0.004 0.004 0.004 0.004 0.004 0.002 0.004 0.004 0.003 0.003 MH861659.1 0.002 0.002 0.002 0.002 0.002 0.004 0.002 0.002 0.006 0.002 MH865522.1 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 0.002
(34) This isolated endophytic fungus EPE-10 was deposited in the Microbial Type Culture Collection and Gene Bank and was assigned the strain number MTCC 25236. The colony of Ovatospora brasiliensis MTCC 25236 was grayish white with a cottony texture, having black dots on the surface (
(35) The biochemical characterization was done for Ovatospora brasiliensis MTCC 25236 and it gave positive results for catalase test and Esculin hydrolysis (Table 3). The fungus also utilized different carbohydrates for its growth (Table 4,
(36) TABLE-US-00005 TABLE 3 Biochemical characterization of Ovatospora brasiliensis MTCC 25236 S. No. Test O. brasiliensis MTCC 25236 1 Catalase + 2 Indole − 3 Methyl Red − 4 Voges Proskauers − 5 Citrate − 6 Esculin hydrolysis + + Positive, − Negative
(37) TABLE-US-00006 TABLE 4 Carbohydrate utilization by Endophytic Fungi (EPE-10) for the growth O. brasiliensis, MTCC 25236 S. No. Test Growth Color change red to Yellow 1 Starch +++ ++ 2 Dextrose +++ ++ 3 Lactose +++ − 4 Fructose +++ + 5 Mannitol + − 6 Sucrose +++ ++ 7 Maltose +++ − + Mild reaction, ++ Medium reaction; +++ Complete reaction
Example 2: Bioconversion of Curcuminoids to Calebin-A
(38) Methods
(39) The identified O. brasiliensis. MTCC 25236 was grown in PDB for minimum 7 days to maximum 21 days in 500 ml volumes of suitable media at optimal incubation conditions. 1%-5% of 72 hrs grown culture was added to 500 ml of PDB and incubated at 25-35° C. with 120 rpm agitation for 5-21 days. Acinetobacter johnsonii NCIMB 9871 or Pseudomonas putida NCIMB 10007 were purchased from NCIMB Ltd, Ferguson Building, Craibstone Estate, Bucksburn, Aberdeen, AB21 9YA. Pseudomonas putida, Acinetobacter johnsonii were grown in a media containing bacteriological peptone 17 g/L, soya peptone 3 g/L, dextrose 2.5 g/L, MnSO.sub.4 0.1 g/L, MgSO.sub.4 0.1 g/L, CaCl.sub.2) 0.1 g/L, K.sub.2HPO.sub.4 2 g/L, KH.sub.2PO.sub.4 1 g/L, and pH was adjusted to 6.5. The media was sterilized for 15 min at 121° C. A single isolated colony of Pseudomonas putida and Acinetobacter johnsonii were inoculated into flask containing the media. Further, the flasks were incubated at 37° C. for 72 h. At different time intervals 24 h, 48 h, 72 h and 10 ml of broth was collected and checked for optical density (OD), total reducing sugar and pH.
(40) Curcuminoids or commercially available Curcumin C3 Complex® (Registered™ of Sabinsa Corporation, USA) ranging from 0.5 mg to 50 mg was added after 7 days and further incubated at 25-35° C. with 120 rpm agitation. The flasks were harvested every 24, 48, 72, 96, 120 hrs, and centrifuged to separate the supernatant. The supernatant was then dried under vacuum and the components were extracted using ethyl acetate and methanol successively. The presence of Calebin-A in the extracts was identified and quantified using HP-TLC, HPLC and LCMS.
(41) High Performance Thin Layer Chromatography (HP-TLC)
(42) For the analysis, pre coated 60 F254 silica gel plates were used. Plant extract using ethyl acetate and methanol was applied with a 100 μl Linomat syringe using a semi-automatic Linomat V applicator (Camag, Muttenz, Switzerland). 2 μl of each sample was loaded on the plates and developed using Chloroform: Methanol (98:2). Using scanner 3 (Camag) the plate was scanned at 280 nm with deuterium illumination. The images were captured on Camag reprostar 3 with win CATS software (ver. 1.4.3.6336). Fungal extracts of ethyl acetate and methanol were concentrated and taken as semi-solid paste from 500 ml culture and the yield were calculated. The known concentrated of the sample were dissolved in the respective solvent for the HPTLC analysis.
(43) High Performance-Liquid Chromatography (HPLC)
(44) The sample was analyzed by Shimadzu Class Vp series using a Zorbax C18 column (250×4.6 mm, 5μ particle size), binary gradient pump (LC10 ATVp), a DAD detector (SPD-M10A Vp), a system controller (SCL-10A Vp), and a Rheodyne injector with 20 μl sample loop. The mobile phase was 0.6 g Citric acid (AR grade) and 400 mL of tetrahydrofuran (HPLC grade) in 1000 ml milli-Q water was filtered through 0.2μ membrane filter before use and pumped from the solvent reservoir at a flow rate of 1.0 ml/minutes, which yielded column backup, the pressure of 160-170 kgf/cm2 the column was maintained at 27° C. syringe volume of 20 μl of respective samples were injected. Standards of 50 mg of Curcuminoids and Calebin-A were weighed accurately and dissolve with 80 mL of Tetrahydrofuran and make up to 100 ml solution in volumetric flask. Pipette out 5 mL of stock solution of standards respectively and make up to 50 mL with the mobile phase. The sample of 1 gram dissolved with Tetrahydrofuran and make up to 100 ml solution in volumetric flask. From the stock solution of sample 5 mL taken for analysis by diluting it in 50 mL of mobile phase solution.
(45) Results
(46) The conversion of curcumin into Calebin-A was more compare to the control endophytic fungus, even though the endophytic fungus itself produced minor amount of Calebin-A (which was detected through HPLC, not in HPTLC). The conversion rate was higher when the curcumin added in the medium after the three days of the inoculation of culture. The HPTLC results showed the similar band to the Calebin-A standard at the same Rf (
(47) Similarly, Calebin-A was also produced from curcuminoids by bacterial species Pseudomonas putida NCIMB 10007 and Acinetobacter johnsonii NCIMB 9871. The bacterial species were cultured in suitable growth media (
(48) While the invention has been described with reference to a preferred embodiment, it is to be clearly understood by those skilled in the art that the invention is not limited thereto. Rather, the scope of the invention is to be interpreted only in conjunction with the appended claims.
(49) TABLE-US-00007 SEQUENCE LISTING FORWARD PRIMER - NS1 SEQ ID 1 5′-GTAGTCATATGCTTGTCTC-3′ REVERSE PRIMER - NS4 SEQ ID 2 5′-CTTCCGTCAATTCCTTTAAG-3′ 18s rDNA SEQ ID 3 5′AGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGG ATCATTAAAGAGTTGCAAAACTCCCTAAACCATTGTGAACCTACCTTCAA CCGTTGCTTCGGCGGGTTGGCACCGGGTCTCCCGGCGCCCCCGGCCCCCT CGCGGGGCGGCCCGCCGGAGGTACCTAACTCTTGAACATTGTATGGCCTC TCTGAGTCTTCTGTACTGAATAAGTCAAAACTTTCAACAACGGATCTCTT GGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAAT TGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCGCCA GTATTCTGGCGGGCATGCCTGTTCGAGCGTCATTTCAACCATCAAGCCCC GGGCTTGTGTTGGGGACCTGCGGCTGCCGCAGGCCCTGAAATGCAGTGGC GGGCTCGCTGTCACACCGAGCGTAGTAGCATTATCTCGCTCTGGGCGTGC TGCGTGTCCCGGCCGTAAAACGACCTTACACCCAAGGTTGACCTCGGATC AGGTAGGAAGACCCGCTGAACTTAAGCATATCAA 3′
ASCII text file name: Microbial_bioconversion_Sequence_listing_ST25
Date Created: 19 Feb. 2019
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