METHODS AND FORMULATIONS FOR THE TREATMENT OF OBESITY AND OBESITY-RELATED METABOLIC DISEASES
20210198668 · 2021-07-01
Inventors
Cpc classification
C12N2320/32
CHEMISTRY; METALLURGY
C07H21/00
CHEMISTRY; METALLURGY
C12N2320/35
CHEMISTRY; METALLURGY
C07H1/00
CHEMISTRY; METALLURGY
C12N15/113
CHEMISTRY; METALLURGY
International classification
C12N15/113
CHEMISTRY; METALLURGY
Abstract
An oligo- or polynucleotide analogue having one or more structures of the general formula: where B is a pyrimidine or purine nucleic acid base, or an analogue thereof, is used for treating obesity-related metabolic diseases.
Claims
1. A method for treatment of obesity and obesity-related metabolic diseases in animals which method comprises increasing the animal's metabolic function by administering to the animal a therapeutically effective amount of an antisense oligonucleotide.
2. The method of claim 1, wherein the antisense oligonucleotide has a structure defined by the following formula: ##STR00004## wherein B is a pyrimidine or purine nucleic acid base, an analogue thereof, X and Y are identical or different, and each represents a hydrogen atom, an alkyl group, an alkenyl group, an alkynyl group, a cycloalkyl group, an aralkyl group, an aryl group, an acyl group, or a silyl group, or an amidite derivative thereof.
3. The method of claim 2, wherein B includes the following sequence: TABLE-US-00004 Sequence (5′-3′): +G*+T*+T*G*A*G*A*T*A*G*C*A*+T*C*+A*G.
4. The method of claim 1, wherein the therapeutic agent is administered orally, parenterally, topically, directly to the lungs, rectally or vaginally.
5. The method of claim 1, wherein the antisense oligonucleotide is administered in a dose of between 1 mg/kg and 20 mg/kg based on the patient's weight in kg.
6. The method of claim 5, wherein the dose is administered once, twice or, three time or more per day.
7. The method of claim 5, wherein treatment is continued daily for 30, 45, 60 or 90 days.
8. The method of claim 1, wherein the animal is a human, and the disease is selected from the group consisting of nonalcoholic fatty liver disease, metabolic syndrome, Duchenne muscular dystrophy (DMD), diabetes, cancer recovery, muscle loss due to deconditioning, hypertension, nonalcoholic steatohepatitis (NASH), dyslipidemia and obesity.
9. A therapeutic formulation for treatment of obesity, and obesity-related metabolic diseases comprising an antisense oligonucleotide in a pharmaceutically acceptable carrier therefor.
10. The formulation of claim 9, wherein the antisense oligonucleotide has a structure defined by the following formula: ##STR00005## wherein B is a pyrimidine or purine nucleic acid base, an analogue thereof, X and Y are identical or different, and each represents a hydrogen atom, an alkyl group, an alkenyl group, an alkynyl group, a cycloalkyl group, an aralkyl group, an aryl group, an acyl group, or a silyl group, or an amidite derivative thereof.
11. The formulation of claim 10, wherein B includes the following sequence: TABLE-US-00005 Sequence (5′-3′): +G*+T*+T*G*A*G*A*T*A*G*C*A*+T*C*+A*G.
12. The formulation of claim 9, wherein the therapeutic agent is in a pharmaceutically acceptable carrier selected form the group consisting of a tablet, capsule, liquid, solution, suspension, syrup, elixir, cream, ointment, lotion, gel, patch, dry powder and suppository.
13. The formulation of claim 9, wherein the antisense oligonucleotide is in an unit dosage form.
14. The formulation of claim 9, wherein the disease is selected from the group consisting of nonalcoholic fatty liver disease, metabolic syndrome, Duchenne muscular dystrophy (DMD), diabetes, cancer recovery, muscle loss due to deconditioning, hypertension, nonalcoholic steatohepatitis (NASH), dyslipidemia and obesity.
Description
[0007] In one aspect of the invention there is provided a method for treatment of obesity and obesity-related metabolic diseases in animals including humans which method comprises increasing the animal's metabolic function by administering to the animal a therapeutically effective amount of an antisense oligonucleotide.
In one embodiment the antisense oligonucleotide has a structure defined by the following formula:
##STR00001##
wherein B is a pyrimidine or purine nucleic acid base, an analogue thereof, X and Y are identical or different, and each represents a hydrogen atom, an alkyl group, an alkenyl group, an alkynyl group, a cycloalkyl group, an aralkyl group, an aryl group, an acyl group, or a silyl group, or an amidite derivative thereof. In such embodiment, B preferably includes the following sequence:
TABLE-US-00001 Sequence (5′-3′); +G*+T*+T*G*A*G*A*T*A*G*C*A*+T*C*+A*G.
[0008] In another embodiment the therapeutic agent may be administered orally, parenterally, topically, directly to the lungs, rectally or vaginally.
[0009] In one embodiment the antisense oligonucleotide is administered in a dose of between 1 mg/kg and 20 mg/kg based on the patient's weight in kg. In such embodiment, the dose preferably is administered once, twice or, three time or more per day.
[0010] In another embodiment treatment is continued daily for 30, 45, 60 or 90 days.
[0011] In another embodiment, the disease is selected from the group consisting of nonalcoholic fatty liver disease, metabolic syndrome, Duchenne muscular dystrophy (DMD), diabetes, cancer recovery, muscle loss due to deconditioning, hypertension, nonalcoholic steatohepatitis (NASH), dyslipidemia and obesity.
[0012] The present invention also provides a therapeutic formulation for treatment of obesity, and obesity-related metabolic diseases comprising an antisense oligonucleotide in a pharmaceutically acceptable carrier therefor.
In one embodiment, the antisense oligonucleotide has a structure defined by the following formula:
##STR00002##
wherein B is a pyrimidine or purine nucleic acid base, an analogue thereof, X and Y are identical or different, and each represents a hydrogen atom, an alkyl group, an alkenyl group, an alkynyl group, a cycloalkyl group, an aralkyl group, an aryl group, an acyl group, or a silyl group, or an amidite derivative thereof. In such embodiment, B preferably includes the following sequence:
TABLE-US-00002 Sequence (5′-3′): +G*+T*+T*G*A*G*A*T*A*G*C*A*+T*C*+A*G.
[0013] In the working examples below, this compound is designated as “M4”.
[0014] In another embodiment the therapeutic agent is in a pharmaceutically acceptable carrier selected form the group consisting of a tablet, capsule, liquid, solution, suspension, syrup, elixir, cream, ointment, lotion, gel, patch, dry powder and suppository.
[0015] In yet another embodiment, the antisense oligonucleotide is in an unit dosage form.
[0016] In still yet another embodiment, the disease is selected from the group consisting of nonalcoholic fatty liver disease, metabolic syndrome, Duchenne muscular dystrophy (DMD), diabetes, cancer recovery, muscle loss due to deconditioning, hypertension, nonalcoholic steatohepatitis (NASH), dyslipidemia and obesity.
[0017] Obesity has a number of etiological pathways. One such pathway of interest is limited muscle mass. Diet, inactivity, and/or genetic predisposition can lead to reduced muscle mass, increasing the inability to burn excess calories and lead to adipocytes storing excess calories as fat. The present disclosure provides therapeutic agents which effectively can regulate muscle growth of obese patients, through gene knockdown therapy, and improve their overall metabolic function. Specifically, the disclosed compounds and formulations have been shown to regulate the expression of several genes to increase the growth of skeletal muscle and diminish the accumulation of fat in adipocytes. Additionally, skeletal muscle mass begins to increase during the treatments as adipocyte mass is reduced. The therapies disclosed herein have also been demonstrated to provide long-lasting results, even months after treatment has concluded, with diminished fat accumulation reported after treatment.
[0018] As described below in detail below, the disclosed therapeutic agents (e.g., compounds, mixtures, formulations, and/or cocktails) include one or more antisense oligonucleotides with a locked backbone. For example, in some embodiments, the antisense oligonucleotide(s) used in the disclosed therapies may be prepared according to the methods described in U.S. Pat. Nos. 6,268,490, 6,770,748 and U.S. RE44,779, which is incorporated herein by reference. In some particular embodiments, the antisense oligonucleotide has a structure defined by the following formula:
##STR00003##
wherein B is a pyrimidine or purine nucleic acid base, an analogue thereof, X and Y are identical or different, and each represents a hydrogen atom, an alkyl group, an alkenyl group, an alkynyl group, a cycloalkyl group, an aralkyl group, an aryl group, an acyl group, or a silyl group, or an amidite derivative thereof.
[0019] The alkyl group represents a straight chain or branched chain alkyl group with 1 to 20 carbon atoms. Its examples include methyl, ethyl, n-propyl, i-propyl, n-butyl, t-butyl, pentyl, hexyl, heptyl, octyl, nonyl and decyl.
[0020] The alkenyl group represents a straight chain or branched chain alkenyl group with 2 to 20 carbon atoms. Its examples include vinyl, allyl, butenyl, pentenyl, geranyl, and farnesyl.
[0021] The alkinyl group represents a straight chain or branched chain alkinyl group with 2 to 20 carbon atoms. Its examples include ethynyl, propynyl, and butynyl.
[0022] The cycloalkyl group represents a cycloalkyl group with 3 to 8 carbon atoms, and includes, for example, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl. Another example is a heterocyclic group in which one or more arbitrary methylene groups on the ring of the cycloalkyl group have been substituted by an oxygen atom, a sulfur atom, or an alkyl-substituted nitrogen atom. It is, for instance, a tetrahydropyranyl group.
[0023] The aryl group refers to a monovalent substituent formed by removing one hydrogen atom from an aromatic heterocyclic group or an aromatic hydrocarbon group. Preferably, it represents a monovalent substituent formed by removing one hydrogen atom from an aromatic hydrocarbon group, and includes, for example, phenyl, tolyl, xylyl, biphenyl, naphthyl, anthryl, and phenanthryl. The carbon atom on the ring of the aryl group may be substituted by one or more of a halogen atom, a lower alkyl group, a hydroxyl group, an alkoxyl group, an amino group, a nitro group, and a trifluoromethyl group. The substituent in this case is, for example, a halogen atom, a hydroxyl group, an amino group, an alkoxy group, or an aryloxy group.
[0024] The aralkyl group refers to an alkyl group bonded to an aryl group, and may be substituted. The aralkyl group that may be substituted represents an alkyl group bonded to an aryl group, with one or more arbitrary hydrogen atoms of the aryl group and the alkyl group being optionally substituted by the following substituents; Examples of the substituents are acyl, amino, aryl, alkyl, cycloalkyl, alkoxy, hydroxyl, nitro, and halogen.
[0025] The amino group need not be substituted, but the amino group when substituted includes, for example, alkylamino, arylamino, and acylamino. Examples of the alkoxy group are methoxy, ethoxy, n-propoxy, 1-propoxy, n-butoxy, 1-butoxy, s-butoxy, t-butoxy, pentyloxy, hexyloxy, and phenoxy. Examples of the halogen atom are fluorine, chlorine, bromine, and iodine.
[0026] The preferred examples of the aralkyl group are trityl, benzyl, phenethyl, tritylmethyl, diphenylmethyl, naphthylmethyl, and 4,4′-dimethoxytrityl (DMTr). Particularly preferred is a DMTr group.
[0027] As the acyl group, acetyl, formyl, propionyl, benzoyl, and benzyloxycarbonyl can be exemplified. An example of the silyl group is a trialkylsilyl group, preferably trimethylsilyl, triethylsilyl, triisopropylsilyl, t-butyldimethylsilyl or t-butyldiphenylsilyl, and more preferably trimethylsilyl.
[0028] In select embodiments, B includes the following sequence:
TABLE-US-00003 Sequence (5′-3′): +G*+T*+T*G*A*G*A*T*A*G*C*A*+T*C*+A*G
which we designated as “M4”.
[0029] The antisense oligonucleotide(s) and other therapeutic compounds (if present) may be administered to a patient in liquid or solid form. In some embodiments, the therapeutic agents may be administered orally (e.g., as a tablet, capsule, liquid, solution, suspension, syrup, or elixir), parenterally (e.g., through a needle or catheter inserted intravenously, intramuscularly, subcutaneously, intra-arterial, intrathecally, or intradermally), topically (e.g., as a cream, ointment, lotion, gel, or transdermal patch), rectally or vaginally (e.g., as a suppository) or directly to the lungs (e.g., using a DPI, MDI or nebulizer).
[0030] The therapeutic compounds may be administered to a patient using any dosing scheme determined appropriate by a medical professional. In some example embodiments, a dose of between 1 mg/Kg and 20 mg/Kg may be administered to a patient (based on the patient's weight in Kg). In other embodiments, however, dosing may be 2, 4, 6, 8, 10, 12, 14, 16 or 18 mg/Kg (based on the patient's weight in Kg.)
[0031] In some embodiments, a patient may be treated with an appropriate dose of therapeutic agent once, twice, three times, or more during a day. Treatment may continue for a select number of days, such as 30 days, at 45 days, at 60 days, at 90 days, or more.
[0032] After treatment has concluded, tire patient may exhibit measurable improvements in physical health. For example, in some cases, patients may experience increased muscle mass, a reduction in fat cells, and/or other improvements during or after treatment. In some particular embodiments, a patient may experience at least 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, or more fat loss (after, for example 30 days of treatment). In these and other embodiments, a patient may exhibit a gam in muscle of at least 5%, 10%, 15%, 20%, 25%, 30%, 35%, or more (after, for example 30 days weeks of treatment). Numerous other health improvements may also be experienced by a patient during and after treatment.
[0033] In some embodiments, health improvements experienced during treatment may persist after treatment. For example, in some embodiments, muscle gain and/or fat loss experienced during treatment may continue or stabilize after treatment for a period of at least three months, at least six months, at least nine months, or more.
[0034] In addition to treating obesity, the disclosed formulations also may be used to treat, prevent, and/or manage symptoms of other obesity-related metabolic diseases and conditions, such as nonalcoholic fatty liver disease, metabolic syndrome, Duchenne muscular dystrophy (DMD), diabetes, muscle loss due to deconditioning cancer recovery, hypertension, nonalcoholic steatohepatitis (NASH) and/or dyslipidemia, During treatment, muscle cells grow at the expense of liver fat storage, thus reversing the cause of fatty liver. Metabolic improvements generated by treatment may also prevent the liver from accumulating excess fat after treatment. Metabolic syndrome includes several common symptoms, including high blood sugar (type-II diabetes), high blood pressure (hypertension), abnormal lipid counts (dyslipidemia), and a variety of other conditions. While current medicines for metabolic syndrome can only target these conditions individually, the disclosed treatments are capable of improving the whole metabolic system, thus treating the root causes of these diseases. DMD is a severe type of muscular dystrophy, and one of the most common X-linked recessive Mendelian diseases. Approximately 1 in 5,000 males are born with DMD, resulting hi muscle loss, fat content increase and loss of the ability to walk. Currently, steroids (with extensive side effects) are the only available treatment for DMD. Compared to steroids, the disclosed treatments have higher efficacy and reduced side effects and thus have the potential to significantly improve the lives of DMD patients.
[0035] The disclosed therapeutic compounds and treatment methods are designed to reduce (and in some cases eliminate) obesity in a patient as well as related diseases and conditions. The disclosed compounds and methods may be used in any mammalian patient, including humans, primates, dogs, cats, mice, or any other mammal. Prior to conducting clinical trials in humans, experiments were conducted in mice and human adipocytes and myocytes. Clinical data from these trials are described below.
Murine Models
[0036] In a first clinical experiment, the effect of a therapeutic compound, as described above, at times referred to herein as “M4,” was evaluated in obese and non-obese mice against a control.
[0037] The “M4” therapeutic compound administered to the test subjects was prepared following the teachings of U.S. RE44,779.
[0038] A total of 42 test subjects were included in the study, with 21 obese and 21 non-obese test subjects. The test subjects were provided with three different doses (5 mg/Kg, 10 mg/Kg and 20 mg/Kg) of the therapeutic compound for a period of four weeks. During the course of treatment, obese subjects were fed a 60% fat diet and non-obese subjects were fed a 10% fat diet. Weight of the test subjects was recorded twice a week.
[0039] The test subjects (mice) participating in the study were black 6 (B6-M) and diet-induced obese B6 (B6-DIO-M), provided by Taconic Biosciences. Both models shared the same genotype. Phenotypic differences in the test subjects were due to percent fat in diet (i.e., 10% as compared to 60%).
[0040] The diet for the test subjects was a rodent diet with 10% kcal % fat (#D12450J) and rodent diet with 60% kcal % fat (#D12492i), provided by Research Diets, Inc.
[0041] All test subjects were housed separately in a 0.22 micron high-energy particular absorber (HEPA) filtered vivarium. There were three treatment groups in the study: a low dose treatment group (5 mg/Kg), a medium dose treatment group (10 mg/Kg), and a high dose treatment group (20 mg/Kg). Three mice were included in each treatment group. Drug formulations and control formulations were administered via tail vein injection twice a week.
[0042] Three stock solutions of M4 and scrambled LN A were produced for the study and sterilized by filtration. The stock solutions were produced as follows: a 2.5 mg/mL for the 5 mg/Kg group, a 5 mg/mL solution for the 10 mg/Kg group, and a 10 mg/mL solution for the 20 mg/Kg group. For each treatment, a dosing of 2 μl/g was administered to the test subject. Dosing was determined by model weight (in grams).
Non-Obese Low Dose Study Results
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Non-Obese Medium Dose Study Results
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Non-Obese High Dose Study Results
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Obese Low Dose Study Results
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Obese Medium Dose Study Results
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Obese High Dose Study Results
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Adipocyte Culture Models
[0117] The following experimentation was performed to determine the efficacy of M4 treatment on human adipocyte cells. In this experimentation, preadipocyte were obtained from Lonza Group (Lonza, Basel, Switzerland). The adipocytes were isolated from fat from normal, un-diseased donors.
[0118] Human preadipocyte cells, as opposed to human adipocytes, were used in the following experiment. The maintenance media used was preadipocyte growth medium-2 (PGM-2) plus supplements: preadipocyte basal medium (500 mL), FBS (10%), L-glutamine (2 mg/mL), GA-1000 (30 μg/mL). The differentiation media used was PGM-2 (100 mL), insulin (2 mg/mL), dexamethasone (0.2 mg/mL), indomethacin (0.4 mg/mL), isobutyl-methylxanthine (0.2 mg/mL).
[0119] Primary human preadipocytes were pre-plated in 6 well plates and induced to become adipocytes. The adipocytes were then exposed to 0.08 mg/mL experimental compound or a control vehicle for 14 days. The resulting cells were analyzed by phase contrast microscopy set to identify lipid engorged cells, MTT (viability), a cell staining.
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[0127] These experimental results show there are fewer lipid engorged adipocytes after treatment with the experimental compound, M4, Additionally, the total number of cells are similar in control and in treatment groups, which indicates low toxicity of M4. Furthermore, there is less reduced cofactor related MTT reduction in the treatment group, which is consistent with “leaky” brown fat cells.