EVALUATION METHOD OF PATHOGEN INACTIVATION EFFECT
20240002899 ยท 2024-01-04
Inventors
Cpc classification
C12Q1/18
CHEMISTRY; METALLURGY
G01N2333/145
PHYSICS
International classification
Abstract
The present disclosure provides an evaluation method of a pathogen inactivation effect, including: evaluating an inactivation effect with a maximum value of effective pathogen inactivation (MVEPI) as a standard reference index; where the MVEPI refers to a maximum of a log reduction factor after pathogen solutions of different concentrations before inactivation are treated according to a same inactivation method. The MVEPI can be obtained through the following steps: inactivating a sample containing pathogens with different initial concentrations through a pathogen inactivation method of tested pathogens; detecting changes in the concentration of pathogens with different initial concentrations before and after pathogen inactivation; and analyzing a relationship between the concentration of pathogens before inactivation and the concentration of pathogens after inactivation and the concentration before inactivation by linear fitting and other methods.
Claims
1. An evaluation method of a pathogen inactivation effect, comprising: evaluating an inactivation effect with a maximum value of effective pathogen inactivation (MVEPI) as a standard reference index; wherein the MVEPI refers to a maximum of a log reduction factor after pathogen solutions of different concentrations before inactivation are treated according to a same inactivation method.
2. The evaluation method according to claim 1, wherein the log reduction factor is expressed as follows:
log RF=lg(N/N.sub.0)=lgNlgN.sub.0; and log RF represents the log reduction factor, N represents a pathogen concentration before inactivation, and N.sub.0 represents a pathogen concentration after inactivation.
3. The evaluation method according to claim 2, wherein the pathogen concentration before inactivation and the pathogen concentration after inactivation each are detected by counting for in vitro cell culture, or calculated by a PCR method or a chemical method, or obtained by thermal curve analysis of a terahertz (THz) metamaterial and other pathogen detection methods.
4. The evaluation method according to claim 1, wherein the pathogen is selected from a group consisting of a bacterium, a virus, a parasite, a protozoon, and a rickettsia.
5. The evaluation method according to claim 4, wherein the bacterium is selected from a group consisting of Escherichia coli and Staphylococcus aureus, and the virus is vesicular stomatitis virus (VSV).
6. The evaluation method according to claim 1, wherein the pathogen is marked with a label selected from a group consisting of a radioactive label, a fluorescent label, and a chemical label.
7. The evaluation method according to claim 1, wherein the MVEPI is obtained by conducting linear fitting analysis with a residual pathogen concentration after inactivation as an independent variable and a corresponding pathogen concentration before inactivation as a dependent variable; alternatively, conducting linear fitting analysis with a pathogen solution concentration before inactivation as an independent variable and a corresponding log reduction factor as a dependent variable; alternatively, conducting linear fitting analysis with the pathogen solution concentration before inactivation as an independent variable and a corresponding pathogen solution concentration after inactivation as a dependent variable.
8. The evaluation method according to claim 7, wherein the MVEPI is obtained by a method comprising the following steps: (1) preparing pathogen solutions of different concentrations before inactivation; (2) conducting pathogen inactivation according to a same inactivation method on each of the pathogen solutions prepared in step (1), and conducting detection to obtain a pathogen concentration in each of the pathogen solutions after inactivation; (3) calculating a log reduction factor for each of the pathogen solutions:
log RF=lgNlgN.sub.0; wherein log RF represents the log reduction factor, N represents a pathogen concentration before inactivation of the pathogen solution, and No represents a pathogen concentration after inactivation of the pathogen solution; (4) analyzing a relationship between the lgN and the corresponding log RF thereof, taking a part having a linear function relationship between the lgN and the log RF, and conducting linear fitting with the lgN as an independent variable and the log RF as a dependent variable on the part to obtain a linear fitting function:
D=f(C); wherein D represents the log RF, and C represents the lgN; and (5) allowing D=C in the linear fitting function, and conducting calculation to obtain a value of the C, namely the MVEPI.
9. The evaluation method according to claim 8, wherein the MVEPI is obtained by a method comprising the following steps: (1) preparing pathogen solutions of different concentrations before inactivation; (2) conducting pathogen inactivation according to a same inactivation method on each of the pathogen solutions prepared in step (1), and conducting detection to obtain a pathogen concentration in each of the pathogen solutions after inactivation; (3) calculating each of the pathogen solutions of different concentrations before inactivation, and corresponding pathogen concentration logarithm values lgN and lgN.sub.0 in each of the pathogen solutions after inactivation, wherein N represents the pathogen concentration before inactivation of the pathogen solution, and No represents the corresponding pathogen concentration after inactivation of the pathogen solution; (4) analyzing a relationship between the lgN and the lgN.sub.0, taking a part having a linear function relationship between the lgN and the lgN.sub.0, and conducting linear fitting with the lgN as an independent variable and the lgN.sub.0 as a dependent variable on the part to obtain a linear fitting function:
D=f(C); wherein D represents the lgN.sub.0, and C represents the lgN.sub.1; and (5) allowing D=0 in the linear fitting function, and conducting calculation to obtain a value of the C, namely the MVEPI.
10. The evaluation method according to claim 8, further comprising conducting error control as follows: (a) preparing m parts of the pathogen solution before inactivation that are identical to step (1) as a control group solution according to the method of step (1); and (b) subjecting the control group solution obtained in step (a) and the pathogen solution after inactivation obtained in step (2) to pathogen culture under same conditions for a same time, and comparing a growth rate of pathogens in the control group solution obtained in step (a) with that of the pathogen solution after inactivation obtained in step (2).
11. The evaluation method according to claim 9, further comprising conducting error control as follows: (a) preparing m parts of the pathogen solution before inactivation that are identical to step (1) as a control group solution according to the method of step (1); and (b) subjecting the control group solution obtained in step (a) and the pathogen solution after inactivation obtained in step (2) to pathogen culture under same conditions for a same time, and comparing a growth rate of pathogens in the control group solution obtained in step (a) with that of the pathogen solution after inactivation obtained in step (2).
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0039]
[0040]
[0041]
[0042]
[0043]
[0044]
[0045]
DETAILED DESCRIPTION
[0046] In the present disclosure, raw materials and equipment used are all known commercially available products obtained by purchasing.
Example 1: MVEPI Value of Inactivation of E. coli by a Riboflavin Inactivation Method and the Effect Evaluation Thereof
1. Preparation of Experimental Samples
[0047] Fresh overnight-cultured E. coli (K12S lederberg) was suspended after centrifugation and diluted with normal saline to different initial concentrations (1-11 log) for later use.
2. Sample Treatment
[0048] Inactivation was conducted by referring to a method disclosed in Yin Y, Li L, Gong L, et al. Effects of riboflavin and ultraviolet light treatment on pathogen reduction and platelets PT Transfusion, 2020, 60(11): 2647-2654. The saline samples containing different concentrations of E. coli were equally divided into two parts. One part was added with 500 mol/L riboflavin saline solution at 1:10 as a sample group to be treated, and a final concentration of riboflavin in the sample was 50 mol/L. The other part was added with the same proportion of normal saline as a control group. The samples of the control group were placed in a 4 C. refrigerator during the treatment of the samples of the experimental group.
[0049] 200 L/well of samples from the treatment group containing physiological saline with different concentrations of E. coli were added to a sterile 24-well plate (Thermo Scientific Nunc), and 6 replicate samples were collected for each concentration sample. All covered 24-well plates containing samples were irradiated for 15 min under UV light with a peak at 311 nm.
3. Detection After Sample Treatment
[0050] After the samples of all test groups were treated, the samples in normal saline control containing different concentrations of pathogens in different experiments (repeatedly taken 6 times) and all samples after treatment were cultured on the corresponding medium after 10 doubling dilution (E. coli were cultured in Brain Heart infusion broth (BHI)), and the growth of pathogens was observed and recorded after 2 d to 4 d. Pathogen titers were calculated by a Reed-Muench method. Pathogen inactivation log reduction factor and pathogen count reduction percentage were calculated using pathogen growth before and after inactivation.
4. Experimental Statistics
[0051] In each experimental condition, the residual pathogen amount after pathogen inactivation, as well as the calculated log reduction factor after inactivation and the growth amount of the pathogen before inactivation were analyzed for correlation, and there was a correlation when P<0.05. Regression analysis was conducted on relevant data sets, and a significance test was conducted on the regression equation containing constant items by variance analysis. When P<0.05, the difference was considered to be significant, and the regression equation was meaningful.
5. Experimental Results
5.1 Analysis for Results of the Traditional Evaluation Methods of Pathogen Inactivation Effect
[0052] Table 1 and
TABLE-US-00001 TABLE 1 Inactivation effect of riboflavin photochemical method on different concentrations of E. coli in normal saline (n = 3) Pathogen Sample pathogen count log Initial concentration reduction reduction concentration after inactivation percentage factor 9.50 0.14 8.22 0.16 96.84 0.37 1.50 0.16 9.40 0.18 7.45 0.16 99.21 0.00 2.10 0.16 8.40 0.15 2.48 0.18 100.00 0.00 6.15 0.16 7.67 0.17 <0.50 100.00 0.00 7.67 0.17 6.50 0.20 <0.50 100.00 0.00 6.50 0.20 5.72 0.08 <0.50 100.00 0.00 5.72 0.18 5.16 0.21 <0.50 100.00 0.00 5.16 0.22 3.64 0.17 <0.50 100.00 0.00 3.64 0.14 2.85 0.12 <0.50 100.00 0.00 2.85 0.16
[0053] Notes: when the pathogen residual degree was lower than the limit of detection, the pathogen residual degree was uniformly recorded as 0 in the calculation of inactivation effect in this table.
5.2 Proposition of MVEPI Value
[0054] It was seen that when the initial concentration of E. coli was less than or equal to 7.670.17 log, the log reduction factor of bacterial inactivation increased with the increase of the initial concentration, and no bacterial residue was detected. When the initial concentration of bacteria exceeded 7.670.17 log, the amount of residual bacteria increased with the increase of the initial concentration of pathogens, and had a positive linear correlation with the initial concentration, Y=5.115X40.475 (P=0.026, Y was the residual concentration of E. coli, X was the initial concentration of E. coli). The log reduction factor decreased with the increase of the initial concentration of bacteria, and had a negative linear correlation with the initial concentration, Y=40.4754.113X (P=0.033, Y was the log reduction factor, and X was the initial concentration of E. coli). Assuming that when the residual amount was approximately to 0, that is, the equation Y=5.115X40.475=0 (P=0.026, Y was the residual concentration of E. coli, X was the initial concentration of E. coli), or the log reduction factor was equal to the initial concentration, Y=40.475-4.113X=X, the calculated X value represented the MVEPI of E. coli when the residual degree was approximately to 0 under this inactivation condition, both were 7.91.
Example 2: Evaluation of Inactivation Effect of Riboflavin Inactivation Method on VSV
1. Preparation of Experimental Samples
[0055] VSV (ATCC VR-1238 ) was diluted with normal saline to different concentrations (1-7 log), and then added to plasma at a ratio of 1:10 to obtain plasma containing virus of different concentrations. The plasma was obtained from the Deyang Central Blood Bank and was approved by the local ethics committee.
2. Sample Treatment
[0056] The sample treatment was divided into three methods: high-acting RUV inactivation VSV treatment, intermediate-acting RUV inactivation VSV treatment, and weak-acting RUV inactivation VSV treatment. The basic processing mode of these methods was the same as that of Example 1, except that the wavelength of light and the dosage were different:
[0057] High-acting: 311 nm, irradiation dose 12.98 J/mL; intermediate-acting: 311 nm, irradiation dose 6.49 J/mL; low-acting: 365 nm, irradiation dose 12.56 J/mL. According to the published report Yin Y, Li L, Gong L, et al. Effects of riboflavin and ultraviolet light treatment on pathogen reduction and platelets [J]. Transfusion, 2020, 60 (11): 2647-2654., inactivation effects of inactivation method from high to low was high-acting>intermediate-acting>low-acting.
3. Detection After Sample Treatment
[0058] The process was the same as that in Example 1
4. Experimental Statistics
[0059] The process was the same as that in Example 1
5. Experimental Results
[0060] When VSV in plasma was inactivated with intermediate-acting RUV, when the VSV concentration was 3.750.22, the log reduction factor increased with the increase of the initial concentration. When the VSV concentration4.260.28, the residual VSV increased with the initial concentration, Y (residual concentration)=1.483X(initial concentration)5.985 (P=0.001). The log reduction factor decreased with the increase of the initial concentration, and had a negative linear correlation with the initial concentration, Y (log reduction factor)=5.9850.483X (initial concentration) (P=0.007).
[0061] Inactivation of VSV in plasma using a weak-acting RUV also demonstrated the applicability of MVEPI. When the VSV concentration was lower than 1.560.13, the log reduction factor after inactivation increased with the initial concentration. When the concentration of VSV was 2.480.25 log, the residual amount of VSV after inactivation increased with the increase of the initial concentration, Y (residual amount)=1.264X (initial concentration)2.241 (P<0.001). After inactivation, the log reduction factor decreased with the increase of the initial concentration, Y (log reduction factor)=2.2410.264X (initial concentration) (P<0.001). The MVEPI calculated using both the residual degree and the log reduction factor was 1.77.
[0062] When the high-acting RUV inactivated VSV in plasma, the maximum limit of detection was exceeded, that is, the MVEPI exceeded 5.99, and an accurate value could not be obtained.
[0063] From the comparison of above results, according to the value of MVEPI: the high-acting MVEPI of greater than 5.99, the intermediate-acting MVEPI of 4.04, and the low-acting MVEPI of 1.77, it was determined that inactivation effect was high-acting>medium-acting>low-acting. These results were consistent with the actual situation reported in the literature, proving that the evaluation method of a pathogen inactivation effect by the MVEPI in the present disclosure was accurate and effective, and showed desirable sensitivity and stability.
Comparative Example 1: Evaluation Results of MLRF Method and MPR Method
[0064] E. coli was inactivated with reference to the method of Example 1. The two most commonly used evaluation methods for inactivation effect were adopted: (1) mean logarithmic reduction factor method (MLRF, expressing inactivation effect with log RF); (2) mean percentage reduction method (MPR, expressing inactivation effect with pathogen count reduction percentage). The accuracy and stability of the above two evaluation methods were verified under different initial concentrations.
[0065] The results were shown in
[0066] For example, when the initial concentration of E. coli was 7.670.17, the log RF after inactivation was 7.670.17, and the pathogen count reduction percentage was close to 100%. However, when the initial concentration of E. coli was 9.500.11, the pathogen count reduction percentage was 96.840.37%, and the log RF was only 1.500.16. Therefore, for different initial E. coli titers, different results of MLRF and MPR were obtained after treatment with riboflavin and UV light under the same conditions. Accordingly, the maximum inactivation capacity of this method could not be accurately evaluated by the pathogen count reduction percentage and log RF.
[0067] Similarly, VSV was inactivated with reference to the method in Example 2, and the results were evaluated by MLRF method and MPR method, as shown in
[0068] In summary, the present disclosure provides an evaluation method of a pathogen inactivation effect using MVEPI as a parameter. The present disclosure is a method for directly evaluating the pathogen inactivation effect. The method is suitable for evaluating the maximum inactivation capacity of different technologies and methods, or for comparing inactivation capabilities of different inactivation technologies and methods. The method shows wide application range, desirable stability, and accurate and effective evaluation results, and has the value of popularization and application.