System and process for biopolymer chromatography
10843104 ยท 2020-11-24
Assignee
Inventors
Cpc classification
B01D15/3809
PERFORMING OPERATIONS; TRANSPORTING
G01N30/468
PHYSICS
B01D15/242
PERFORMING OPERATIONS; TRANSPORTING
International classification
B01D15/24
PERFORMING OPERATIONS; TRANSPORTING
B01D15/38
PERFORMING OPERATIONS; TRANSPORTING
Abstract
A chromatography system for separation of a biopolymer is described, comprising at least one feed tank, at least one hold tank, at least one elution buffer tank, at least one eluate tank, at least two packed bed chromatography columns and at least one pump and at least one outlet detector both fluidically connected to said each packed bed chromatography column, wherein the feed tank, the hold tank(s), the elution buffer tank and the eluate tank are each fluidically connected to the packed bed chromatography columns via a system of valves.
Claims
1. A chromatography system for separation of a biopolymer, comprising: a group of chromatography columns comprising at least a first column, a second column, and a third column, each respective column of the group of chromatography columns having at least one inlet end and at least one outlet end; a system of tanks comprising: (i) a feed tank, (ii) a group of hold tanks comprising at least three hold tanks, (iii) an elution buffer tank, and (iv) an eluate tank, wherein a first hold tank of the group of hold tanks has a first end connected to a respective inlet end of the first column and a second end connected to a respective outlet end of the third column, wherein a second hold tank of the group of hold tanks has one end connected to a respective inlet end of the second column and a second end connected to a respective outlet end of the first column, and wherein a third hold tank of the group of hold tanks has a first end connected to a respective inlet end of the third chromatography column and a second end connected to a respective outlet end of the second column, a group of pumps, each pump of the group of pump having a first end being directly fluidically connected to a respective inlet end of a respective column of the group of columns, each pump of the group of pumps having a second end directly fluidically connected to a respective hold tank of the group of hold tanks; an outlet detector fluidically connected to each column of the group of chromatography columns; a system of valves; and a control unit, wherein the control unit is connected to at least one valve of the system of valves, the group of pumps, and the outlet detector, convey wherein each hold tank of the group of hold tanks is adapted to receive a fluid from the outlet of a first respective column of the group of columns and convey fluid to an inlet of a second respective column of the group of columns, and wherein each hold tank of the group of hold tanks is configured to function as a temporary storage vessel to handle any mismatch flows between the first respective column and the second respective column.
2. The chromatography system of claim 1, wherein the control unit is electrically, pneumatically, or hydraulically connected to the system of valves.
3. The chromatography system of claim 1, further comprising at least one of an equilibration buffer tank, a wash buffer tank, and a regeneration liquid tank, wherein the equilibration buffer tank, the wash buffer tank, and the regeneration liquid tank are each configured to connect to an inlet of at least one pump of the group of pumps.
4. The chromatography system of claim 1, wherein each column of the group of chromatography columns is packed with a resin having affinity towards the biopolymer.
5. The chromatography system of claim 4, wherein the resin includes a proteinaceous ligand, derived from Protein A, Protein G, Protein L, or an antibody.
6. The chromatography system of claim 1, wherein at least one pump of the group of pumps, the outlet detector, and valves of the system of valves include disposable flow paths, mounted in reusable units.
7. The chromatography system of claim 1, wherein the group of pumps includes a multichannel peristaltic pump.
8. The chromatography system of claim 1, wherein the system of valves comprises a pinch valve.
9. The chromatography system of claim 1, wherein the system of valves is devoid of rotary valves and slide valves.
10. The chromatography system of claim 1, wherein each hold tank of the group of hold tanks comprises a first compartment and a second compartment, delimited from each other by a movable seal and wherein said first compartment and the second compartment are both fluidically connected to said group of chromatography columns via the system of valves.
11. The chromatography system of claim 1, wherein each hold tank of the group of hold tanks is cylindrical and the respective movable seal of each hold tank is in a slidable sealing abutment with a side wall of the hold tank.
12. The chromatography system of claim 1, wherein the movable seal is a flexible diaphragm.
13. The chromatography system of claim 1, wherein the first compartment is fluidically connected to an inlet end of a first respective chromatography column of the group of chromatography columns and the second compartment is fluidically connected to an outlet end of a second respective chromatography column of the group of chromatography columns.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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(16) a) feed (solid bold arrows) pumped through a first column to waste line;
(17) b) feed delivered through first column to hold tank once the biopolymer concentration reaches level L1;
(18) c) feed diverted to second column once the biopolymer concentration reaches level L2, and wash solution (dashed bold arrows) pumped through first column;
(19) d) hold tank content mixed with feed and pumped through second column;
(20) e) elution solution (dotted bold arrows) pumped through first column;
(21) f) regeneration solution (dashed semi-bold arrows) pumped through first column,
(22) g) feed pumped through second column to hold tank;
(23) h) feed pumped through first column and wash solution pumped through second column;
(24) i) elution solution pumped through second column;
(25) j) regeneration solution pumped through second column;
(26) k) feed pumped through first column to hold tank;
(27) l) wash solution pumped through first column to hold tank;
(28) m) feed and hold tank content pumped through second column, while first column is washed;
(29) n) first column is eluted;
(30) o) first column is regenerated;
(31) p) feed pumped through second column to hold tank;
(32) q) second column is washed;
(33) r) second column is eluted;
(34) s) second column is regenerated, and;
(35) t) feed pumped through first column to hold tank.
DEFINITIONS
(36) The term feed herein means a liquid provided to a chromatography system and comprising a target species to be purified. The target species can be a biopolymer, such as a protein, e.g. a monoclonal antibody. Examples of feeds can be clarified fermentation broths, biological fluids etc. as well as liquids originating from a previous separation step and comprising a partially purified target species.
(37) The term biopolymer herein means a peptide, protein, nucleic acid, oligosaccharide, polysaccharide or virus particlenative as well as biologically or synthetically modifiedincluding fragments, multimers, aggregates, conjugates, fusion products etc.
(38) The term hold tank herein means a vessel (e.g. a collapsible plastic bag, a rigid tank etc) connected to at least one inlet end of a column and to at least one outlet end of a column. It may be connected to the inlet end of one column and the outlet end of another column or it may be connected to both the inlet end and the outlet end of one column. It may also be connected to several column inlet and outlet ends. A hold tank can be connected to the column(s) via one or more valves, pumps, detectors and/or manifolds.
(39) The term pinch valve herein means a device adapted to control or completely stop the flow through flexible tubing by constriction of the tubing. Pinch valves can e.g. be magnetically, electrically, pneumatically or hydraulically operated, but they can also be manually operated.
(40) The term clamp herein means a manually operated pinch valve.
(41) The term pump herein means either a separate pumping device or an individual channel in a multichannel pumping device, such as e.g. a multichannel peristaltic pump.
(42) The term packed bed chromatography column herein means a column adapted to be packed with a particulate chromatography resin. A packed bed chromatography column can be axial or radial and may comprise a column tube, an inlet porous bed support and an outlet porous bed support, an inlet fluid distributor and an outlet fluid distributor. When packed with the chromatography resin, the resin bed can fill essentially the entire volume between the inlet and outlet porous bed supports.
DETAILED DESCRIPTION OF EMBODIMENTS
(43) In one aspect illustrated by
(44) In certain embodiments, illustrated by
(45) In some embodiments the at least one hold tank 4;4a,4b,4c; 40 is adapted to receive a fluid from an outlet end 14; 140 of a column 7,8; 70,80 and to convey fluid to the inlet end 13; 130 of another column 8,7; 80,70. The hold tank can then function as a temporary storage vessel to handle any mismatch in flow rates between the different columns. The hold tank can be smaller, e.g. at least about 50% smaller, than the feed and elution buffer tanks as it is only used for temporary storage. In certain embodiments the at least one hold tank 4; 4a,4b,4c; 40 is equipped with at least one level indicator (not shown). This/these level indicator(s) can be connected to the control unit and used to avoid overfilling of the hold tank(s), in particular in semi-continuous or discontinuous processes where the flow to the hold tank(s) can be temporarily stopped while the hold tank(s) are emptied. The level indicator(s) can be optical, conductometric, ultrasonic or gravimetric (e.g. a balance).
(46) In certain embodiments, as illustrated by
(47) In some embodiments, the chromatography system also comprises at least one equilibration buffer tank 15, at least one wash buffer tank 16 and/or at least one regeneration liquid tank 17.
(48) In certain embodiments illustrated by
(49) In some embodiments the packed bed chromatography columns are packed with a resin having affinity towards the biopolymer. In specific embodiments the resin comprises a proteinaceous ligand. An advantage of using a proteinaceous ligand is that very high specificities towards the biopolymer can be achieved. Packed bed chromatographic separation is also a process able to give very high resolution between components due to the high numbers of theoretical plates that can be achieved.
(50) In some embodiments the proteinaceous ligand is derived from Protein A, Protein G, Protein L or an antibody. It can be either a native or recombinant protein A, G, L or antibody or it can be a mutant, fragment or multimer of any of these proteins or their binding domains. Such ligands can have very high selectivity and are hence suited for capture of valuable biopharmaceuticals from complex feeds. They are however also expensive and the resin with the ligand should be used as efficiently as possible.
(51) In certain embodiments the pump(s), detectors and/or valves comprise disposable flow paths, such as disposable flow paths mounted in reusable units or housings. The disposable flow paths can comprise disposable tubing, connected to disposable columns or disposable resin cartridges in column housings and to disposable flowpath components in pumps, valves, detectors and transducers. A disposable flow path in a pump can be the tubing in a peristaltic pump, but it can also be e.g. a disposable membrane setup for a membrane pump or a disposable syringe for a syringe pump. Disposable flowpaths in valves can include the tubing in pinch valves, but also e.g. the flowpath components of disposable ball valves, diaphragm valves, one-way valves etc. In a detector, the disposable flowpath can be a transparent flow-through cuvette for optical detection (UV, refractive index, light scattering etc) and in a transducer it can be tubing or specially designed flowpaths for measurement of pressure, flow-rate, conductivity, temperature etc. The flowpath assembly may also comprise sanitary and or sterile connectors, so that parts of the flowpath may be presterilized and connected to form the entire assembly without external contamination.
(52) In some embodiments the pump(s) comprise(s) peristaltic pump(s), such as multichannel peristaltic pump(s). Peristaltic pumps are convenient to use in disposable bioprocessing systems as they do not add any fluid-contact surfaces and they are well adapted to parallel conveying of fluids in that one pump head can be used with several tubes. It is possible to use only one multichannel pump for the entire system, but it is also possible to use several single- or multichannel pumps. If different flow rates are to be used in different lines, it is possible to use tubing of different diameters in the channels of a multichannel peristaltic pump. Further, it is possible to stop the flow in a separate line by releasing the compression of the tubing on the rollers of the pump.
(53) In certain embodiments the valves 12; 120 comprise pinch valves such as clamps or pinch valves operated by e.g. magnetic, electrical, pneumatic or hydraulic actuation. Pinch valves are commonly used in disposable bioprocessing because they can be mounted directly on the flexible tubing flowpaths with no additional fluid-contact surfaces. They are however not currently used in continuous or semi-continuous chromatography, as they are only adapted for closing/opening a flow path or regulating the flow rate in the path. Continuous and semi-continuous chromatography has hitherto relied on valves that are able to selectively direct flow into a plurality of branching flowpaths, i.e. multipath valves such as rotary valves and slide valves. With the hold tank(s) of the invention it is however possible to conduct continuous/semi-continuous chromatography using pinch valves.
(54) In some embodiments the valves do not comprise rotary valves, slide valves or other components with moving parts in contact with the liquids. Rotary valves and slide valves are not easily adaptable to disposable bioprocessing in that they have complex precision engineering liquid contact parts.
(55) In certain embodiments one or more of the tanks 3,4,4a,4b,4c,5,6,15,16,17,18; 40,60, such as all the tanks, comprise collapsible bags. Bags are highly useful tank constructions in disposable bioprocessing, as they are cheap, can easily be presterilized and take up small storage space when folded before and after use.
(56) In some embodiments, illustrated by
(57) The movable/flexible seal allows operation under conditions where one liquid is pumped into one of the compartments and simultaneously another liquid in the other compartment is displaced out of the other compartment. In a specific embodiment the at least one hold tank is generally cylindrical and said movable or flexible seal is in slidable sealing abutment with a side wall of said hold tank. Alternatively, the movable or flexible seal is a flexible diaphragm, optionally comprising a flexible plastic film.
(58) In some embodiments the chromatography system is used for separation of a biopolymer. The system is particularly useful for this purpose in that the presence of the hold tank(s) allows for easy operation in high-efficiency continuous or semi-continuous modes, where the different phases of the separation process are likely to require different flow rates and the hold tanks act as buffer reservoirs to accommodate liquids between the columns.
(59) In one aspect, illustrated by
(60) In some embodiments step c) can be conducted while maintaining the flow of the feed through the first column 7; 70 until the biopolymer concentration reaches a second predetermined level L2 as measured by the outlet detector connected to the first column. The feed can then be directed from the feed tank 3 via the hold tank 4; 4b; 40 to the second column 8; 80.
(61) In certain embodiments the biopolymer is an impurity to be removed, such as a biopolymer selected from the group of host cell proteins, DNA, leached proteinaceous ligands, virus particles and antibody aggregates. The feed can then in step a) be pumped through the first column to the eluate tank 6; 60. The method of the invention is suitable for using in flow-through removal of contaminants in bioprocessing of e.g. monoclonal antibodies. In this case, the method can suitably be applied in a polishing step, i.e. after a capture step using e.g. affinity chromatography with protein A or another proteinaceous ligand. For removal of residual impurities such as host cell proteins, host cell DNA, protein A residues, viruses and/or aggregated antibodies, a multimodal resin, an anion exchange resin, a HIC resin or hydroxyapatite may be used in flow-through mode, where the antibody is collected in the flow-through and the contaminants are bound to the resin. In some embodiments the resin is selected from the group consisting of multimodal resins, ion exchange resins, HIC resins and apatite. In an advantageous embodiment, a multimodal anion exchange resin such as CAPTO adhere (GE Healthcare) is used.
(62) In certain embodiments further illustrated by
In these embodiments, the feed can in step a) be pumped through the first column to the waste line or waste receptacle 19; 19a,19b.
(63) The method can also comprise a step of pumping a column regeneration solution through the first column 7 into a waste line or waste receptacle 19; 19a,19b. It can also before step b.sup.i comprise a step of terminating the flow of feed to the first column 7; 70 once the biopolymer concentration reaches a second predetermined level.
(64) The predetermined biopolymer concentration levels L1,L2,L3 can be determined as illustrated in
(65) In some embodiments the biopolymer is a biopharmaceutical, such as a plasmid, a vaccine or a protein selected from the group of immunoglobulins, monoclonal antibodies, antibody fragments, insulin, coagulation factors and erythropoietin. These biopolymers can be separated by the method of the invention in bind-elute mode, where the biopolymer binds to the resin during loading and is desorbed by the elution buffer and recovered in the eluate tank.
(66) In certain embodiments the resin is an affinity resin, such as a resin comprising a proteinaceous ligand. These resins can suitably be used in bind-elute mode with the method of the invention.
(67) In some embodiments further illustrated by
(68) In certain embodiments the method also comprises the steps of e.sup.i) pumping the wash buffer through the second column 8 and the second outlet detector into the hold tank 4; 4b or the second hold tank 4c while monitoring the biopolymer concentration with the second outlet detector, e.sup.ii) directing the flow from the second outlet detector to a waste receptacle 19 once the biopolymer concentration is below the third predetermined level L3, e.sup.iii) pumping the elution buffer through the second column 8 to an eluate tank.
(69) In some embodiments the method comprises before step e.sup.i a step of terminating the flow of feed into the second column 8 when the biopolymer concentration reaches the second predetermined level L2.
(70) In certain embodiments at least one hold tank 40 comprises a first compartment 40a and a second compartment 40b, delimited from each other by a movable or flexible seal 41. The first compartment and the second compartment are both fluidically connected to the at least two columns 70,80 via a system of valves 120, and in step b) the flow is directed to the first compartment of the hold tank, while in step c) the pumping is achieved by pumping a fluid into the second compartment of the hold tank, such that the content of the first compartment is conveyed to the second column.
(71) In some embodiments the pump(s) 10; 100 comprise(s) peristaltic pump(s) such as multichannel peristaltic pump(s).
(72) In certain embodiments the flows are controlled by a system of pumps 10; 100 and pinch valves electrically, pneumatically or hydraulically connected to a control unit 2.
(73) In one aspect, illustrated by
(74) In some embodiments the hold tank 40 can be compartmentalized to provide dedicated compartments for the first column 70 and for the second column 80.
(75) In one aspect, illustrated by
(76) This written description uses examples to disclose the invention, including the best mode, and also to enable any person skilled in the art to practice the invention, including making and using any devices or systems and performing any incorporated methods. The patentable scope of the invention is defined by the claims, and may include other examples that occur to those skilled in the art. Such other examples are intended to be within the scope of the claims if they have structural elements that do not differ from the literal language of the claims, or if they include equivalent structural elements with insubstantial differences from the literal languages of the claims. It is to be noted that features of different embodiments can be combined to form further embodiments.