OPTICAL METHOD FOR ESTIMATING A REPRESENTATIVE VOLUME OF PARTICLES PRESENT IN A SAMPLE
20200326269 ยท 2020-10-15
Assignee
- Commissariat A L'energie Atomique Et Aux Energies Alternatives (Paris, FR)
- HORIBA ABX SAS (Montpellier Cedex 4, FR)
Inventors
- Pierre Blandin (Coublevie, FR)
- Anais ALI-CHERIF (Clermont-Ferrand, FR)
- Aurelien Daynes (Montpellier, FR)
- Estelle Gremion (La Tour du Pin, FR)
- Damien Isebe (Grabels, FR)
Cpc classification
G03H2001/005
PHYSICS
G01N2015/1454
PHYSICS
G03H1/0443
PHYSICS
G03H1/0866
PHYSICS
International classification
G03H1/00
PHYSICS
G03H1/08
PHYSICS
Abstract
The invention is a method for estimating a representative volume of particles of interest (10 i) immersed in a sample, the sample extending in at least one plane, referred to as the sample plane (P 10), the sample comprising a sphering agent, capable of modifying the shape of the particles, the method comprising the following steps: a) illuminating the sample by means of a light source (11), the light source emitting an incident light wave (12) propagating towards the sample (10) along a propagation axis (Z); b) acquiring, by means of an image sensor (16), an image (I 0) of the sample (10), formed in a detection plane (P 0), the sample being arranged between the light source (11) and the image sensor (16), each image being representative of a light wave (14) referred to as an exposure light wave, to which the image sensor (16) is exposed under the effect of illumination; c) using the image of the sample (I 0), acquired during step b), and a holographic propagation operator, to calculate a complex expression (A (x, y, z)) of the exposure light wave (14) in different positions relative to the detection plane; the method comprising a step of estimating the representative volume (AA) of the particles of interest (10 i) depending on the complex expressions calculated during step c).
Claims
1.12 (canceled)
13. A method for estimating a volume representative of particles of interest immersed in a sample, the sample extending in at least one sample plane, the sample comprising a sphering agent capable of modifying the shape of the particles, the method comprising: a) illuminating the sample with a light source, the light source emitting an incident light wave propagating toward the sample along a propagation axis; b) acquiring an image of the sample with an image sensor, the image being formed in a detection plane, the sample being arranged between the light source and the image sensor, the image being representative of an exposure light wave to which the image sensor is exposed under the effect of the illumination; c) using the image of the sample, acquired in b), and a holographic propagation operator so as to calculate a complex expression of the exposure light wave at various positions distant from the detection plane, and forming a complex image corresponding to a distribution of the complex expression of the exposure light wave in the sample plane; the method further comprising: detecting of regions of interest, using of the complex image, each region of interest being associated with a particle of interest; determining a size of each region of interest; estimating a volume representative of the particles of interest as a function of the size of each region of interest, each particle of interest being assumed to be spherical.
14. The method according to claim 13, wherein the volume representative of the particles of interest is a mean volume of said particles of interest.
15. The method according to claim 13, wherein: the volume representative of the particles of interest is a mean volume of said particles of interest the particles of interest are red blood cells; the mean volume of the particles of interest is a mean cellular volume of the sample.
16. The method according to claim 14, the method further comprising establishing a parameter representing a dispersion of the volumes of the particles of interest.
17. The method according to claim 16, wherein the particles of interest are red blood cells, the method further comprising determining a distribution index of the red blood cells.
18. The method according to claim 13, further comprising determining a quantity of particles of interest in the sample.
19. The method according to claim 18, wherein: the particles of interest are red blood cells; the volume representative of the particles of interest is a mean volume of said particles of interest; the method further comprising determining a hematocrit on the basis of the mean volume of the particles of interest and the quantity of particles of interest in the sample.
20. The method according to claim 13, wherein the volume representative of the particles is a median volume of the particles of interest or the volume of each particle of interest taken individually.
21. The method according to claim 20, wherein the volume representative of the particles is the volume of each particle of interest taken individually, the method comprising the obtaining of a distribution of the volumes of the particles of interest.
22. The method according to claim 13, wherein there are no image formation optics or no magnification optics between the image sensor and the sample.
23. A device for estimating a volume representative of particles of interest arranged in a sample, the device comprising: a light source, configured to emit an incident light wave propagating toward the sample; a support configured to hold the sample between the light source and an image sensor; a processor configured to receive an image of the sample acquired by the image sensor and to carry out at least step c) of the method of claim 13, the processor being configured to estimate the volume representative of the particles of interest on the basis of the complex expressions calculated during step c).
24. The device as claimed in claim 23, wherein there are no magnification optics or image formation optics between the image sensor and the sample.
Description
FIGURES
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[0060] The comparison is carried out by modifying the position of a focal plane in which the majority of the particles of the sample extend.
DESCRIPTION OF PARTICULAR EMBODIMENTS
[0061]
[0062] The sample 10 is a sample that is intended to be characterized. It comprises in particular a liquid medium 10.sub.m in which particles, referred to as particles of interest 10.sub.i, are immersed. The medium 10.sub.m may be a buffer liquid. It may also comprise a body fluid in the pure or diluted state. The term body fluid is intended to mean a liquid generated by a living body. It may in particular, without limitation, be blood, urine, cerebrospinal fluid, sperm, lymph. A particle is intended in particular to mean a cell, for example a blood cell, a microorganism, for example a bacterium. The invention applies in particular to a particle of interest that has a nonspherical shape in its normal state. In the examples described below, the particles of interest are red blood cells.
[0063] The sample also comprises a so-called sphering agent 10.sub.r capable of modifying the surface tension of the membrane delimiting the particles. Under the effect of such an agent, the particles of interest 10.sub.i assume a spherical shape, or approximate the shape of a sphere. Thus, the particles of interest 10.sub.i are sufficiently flexible and deformable so that their morphology can be modified under the action of such an agent. The use of sphering agents to deform red blood cells is known, and has been described in cytometry applications in documents U.S. Pat. Nos. 5,633,167, 8,837,803 or 5,284,771. Such agents make it possible to modify the shape of a red blood cell. It may in particular be a surfactant, for example a zwitterionic surfactant. It may for example be a derivative of glycine betaine, for example an alkyl betaine, or an alkylamido betaine (for example cocamidopropyl betaine, CAPB), an alkyl maltoside, an alkyl glucamide. It may be 3-(N,N-dimethyldodecylammonio)propanesulfonate. The sphering agent 10.sub.r is preferably diluted in a neutral or isotonic buffer solution, for example phosphate buffer, usually referred to by the acronym PBS (Phosphate Buffer Saline). The person skilled in the art may adapt the dilution factor so that the sphering reagent deforms the particles of interest 10.sub.i sufficiently without lysing them. The sphering agent concentration is typically between 50 mg/I and 300 mg/l, preferably 100 mg/l. The sample may comprise total blood diluted in the sphering agent solution by a dilution factor of preferably between 1/400 and 1/1200.
[0064] In this example, the sample 10 is contained in a fluidic chamber 15. The fluidic chamber 15 is, for example, a fluidic chamber of the Countess type with a thickness e=100 m. The thickness e of the fluidic chamber 15, and therefore of the sample 10, along the propagation axis typically varies between 10 m and 1 cm, and is preferably between 20 m and 500 m. The sample extends in a plane P.sub.10, referred to as the sample plane, perpendicular to the propagation axis Z. It is held on a support 10s at a distanced from an image sensor 16.
[0065] The sphering reagent is added to the sample before introduction into the fluidic chamber 15. It may also be added after this introduction or during this introduction, for example by being present in the dry state in the fluid chamber 15. The sphering agent concentration in the sample is adapted by the person skilled in the art according to the sample used.
[0066] The sample may comprise particles 10.sub.j other than the particles of interest 10.sub.i that are intended to be analyzed. In this case, the method comprises a step of selecting the particles of interest 10.sub.i from among the particles. This step is described below.
[0067] The distance D between the light source 11 and the sample 10 is preferably more than 1 cm. It is preferably between 2 and 30 cm. Advantageously, as seen by the sample, the light source is considered to be a point light source. This means that its diameter (or its diagonal) is preferably less than one tenth, more preferably than one hundredth, of the distance between the sample and the light source. In
[0068] Preferably, the spectral emission band of the incident light wave 12 has a width of less than 100 nm. The width of a spectral band is intended to mean a full-width at half-maximum of said spectral band.
[0069] According to one embodiment, the light source 11 comprises a plurality of elementary light sources 11.sub.k, each being capable of emitting an incident light wave 12.sub.k in a spectral band .sub.k. Preferably, the spectral bands .sub.k of the various light sources 11.sub.k are different to one another.
[0070] The sample 10 is arranged between the light source 11 and the image sensor 16 mentioned above. The latter preferably extends parallel or substantially parallel to the plane P.sub.10 in which the sample extends. The term substantially parallel means that the two elements may not be strictly parallel, an angular tolerance of a few degrees, less than 20 or 10, being allowed. In this example, the sample extends in a plane XY perpendicular to the propagation axis Z.
[0071] The image sensor 16 is capable of forming an image I.sub.0 in a detection plane P.sub.0. In the example represented, it is an image sensor comprising a matrix of pixels of the CCD type, or a CMOS. The detection plane P.sub.0 preferably extends perpendicularly to the propagation axis Z of the incident light wave 12. The distance d between the fluidic chamber 15 and the matrix of pixels of the image sensor 16 is preferably between 50 m and 2 cm, preferably between 100 m and 2 mm.
[0072] In this embodiment, the absence of optics for magnification or image formation between the image sensor 16 and the sample 10 may be noted. This does not prohibit the possible presence of focusing microlenses at each pixel of the image sensor 16, these not having the function of magnifying the image acquired by the image sensor, their function being to optimize the detection efficiency.
[0073] Under the effect of the incident light wave 12, the particles present in the sample may generate a diffracted wave capable of producing interference in the detection plane P.sub.0, in particular with a part 12, transmitted by the sample, of the incident light wave. Furthermore, the sample may absorb a part of the incident light wave 12. Thus, the light wave 14 which is transmitted by the sample and to which the image sensor 16 is exposed, referred to by the term exposure wave, may comprise: [0074] a component 13 resulting from the diffraction of the incident light wave 12 by each particle of the sample; [0075] a component 12 resulting from the transmission of the incident light wave 12 by the sample, part of which may be absorbed in the sample.
[0076] These components form interference in the detection plane P.sub.0. The image I.sub.0 acquired by the image sensor also comprises interference patterns (or diffraction patterns), it being possible to associate each interference pattern with a particular sample.
[0077] A processor 20, for example a microprocessor, is capable of processing each image I.sub.0 acquired by the image sensor 16. In particular, the processor is a microprocessor connected to a programmable memory 22, in which a sequence of instructions for carrying out the image-processing and calculation operations described in this description is stored. The processor may be coupled to a screen 24 displaying images acquired by the image sensor 16 or calculated by the processor 20.
[0078] An image I.sub.0 acquired by the image sensor 16, also referred to as a hologram, does not make it possible to obtain a sufficiently precise representation of the sample observed. As described in connection with the prior art, a holographic propagation operator h may be applied to each image acquired by the image sensor, so as to calculate a complex quantity A representing the exposure light wave 14 at any point with coordinates (x,y,z) in space, and particularly in a reconstruction plane P.sub.z located at a distance |z|, referred to as the reconstruction distance, from the image sensor 16. The reconstruction plane is preferably the plane P.sub.10 in which the sample extends, with:
[0079] A(x,y,z)=I.sub.0 (x,y,z).Math.h, the symbol .Math. denoting the convolution operator.
[0080] The function of the propagation operator h is to describe the propagation of light between the image sensor 16 and a point with coordinates (x,y,z), located at a distance |z| from the image sensor. The complex expression A of the light wave 14, at any point with coordinates (x,y,z) in space is such that: A(x,y,z)=M(x,y,z)e.sup.j(x,y,z) (3). It is possible to determine the modulus M(x,y,z) and/or the phase (x,y,z) of the light wave 14 at the distance |z|, with:
M(x,y,z)=abs [A(x,y,z)];
(x,y,z)=arg [A(x,y,z)].
[0081] The operators abs and arg respectively denote the modulus and the argument.
[0082] In the rest of this description, the coordinates (x,y) denote a planar position in a radial plane XY perpendicular to the propagation axis Z. The coordinate z denotes a cornet along the propagation axis Z.
[0083] The complex quantity A is a complex quantity whose argument and modulus are respectively representative of the phase and the amplitude of the exposure light wave 14 detected by the image sensor 16. The combination of the image I.sub.0 with the propagation operator h makes it possible to obtain a complex image A.sub.z representing a spatial distribution of the complex expression A in a reconstruction plane P.sub.z extending at a distance |z| from the detection plane P.sub.0. In this example, the detection plane P.sub.0 has the equation z=0. The complex image A.sub.z corresponds to a complex image of the sample in the reconstruction plane P.sub.z. It also represents a two-dimensional spatial distribution of the complex expression A describing the exposure wave 14. Such a method, referred to by the term holographic construction, makes a possible in particular to reconstruct an image M.sub.z of the modulus or an image .sub.z of the phase of the complex expression describing the exposure light wave 14 in the reconstruction plane. The image of the modulus or of the phase of the exposure light wave 14 is respectively obtained according to the following expressions:
M.sub.z=mod (A.sub.z) and .sub.z=arg(A.sub.z).
[0084] The propagation operator is for example the Fresnel-Helmholtz function, such that:
[0085] The propagation of an image I.sub.0 acquired by an image sensor has already been described in the publication Seo 2010 cited in the prior art. In this publication, an image of the phase of the exposure light wave 14 is reconstructed in a plane parallel to the detection plane. The area of each red blood cell in the phase image is detected by a thresholding algorithm. It is then multiplied by the value of the thickness, which is obtained by dividing the phase by the refractive index, which is assumed to be known, so as to obtain an estimate of the volume of each red blood cell. The Inventors have observed that according to the method described in this publication, it is preferable if not essential to wait for the red blood cells to sediment so that they accumulate in the same plane with the same orientation. This is because, since red blood cells are biconcave particles, estimation of their volume on the basis of an image requires that their orientations be known. Otherwise, the estimation of the volume of the red blood cells may be subject to a large uncertainty.
[0086] This difficulty is lessened by the presence of the sphering agent in the sample.
[0087] Specifically, the Inventors have found that in the presence of such a sphering agent, obtaining a complex image in a reconstruction plane allows correct estimation of the volume of the red blood cells, or their mean volume. The question of their orientations no longer arises, since their shape is spherical. There is therefore no need to wait for any sedimentation.
[0088] According to a first embodiment of the invention, a mean volume of particles of interest, in this case red blood cells, is estimated. Such a volume is commonly referred to as mean cellular volume. The estimation method follows the steps represented in
[0089] Step 100: acquisition of an image I.sub.0 of the sample by the image sensor 16.
[0090] One of the benefits of the lens-free configuration represented in
[0091] Step 110: application of a propagation operator h to an image obtained on the basis of the image I.sub.0 acquired during step 100, in order to obtain a complex image A.sub.z in a reconstruction plane P.sub.z. Preferably, the propagation operator is applied to the acquired image I.sub.0, optionally normalized by the average size
[0092] The reconstruction plane P.sub.z may be defined by using a numerical focusing algorithm known to the person skilled in the art, consisting in using various propagations in different reconstruction planes, each plane being located at a different reconstruction distance from the detection plane. A clarity criterion is established on the basis of each complex image reconstructed. The reconstruction plane finally adopted, referred to as the focusing plane P.sub.focus, is the one for which the clarity criterion is optimal. This plane is a plane in which the sample extends, and in which the majority of the particles of interest 10; present in the sample extend. As an alternative, the focusing plane is determined a priori.
[0093] Step 120: formation of an image, referred to as the observation image I.sub.obs, on the basis of the modulus or the phase of the reconstructed complex image. The observation image I.sub.obs makes it possible to observe the particles of the sample. The observation image I.sub.obs corresponds to an image of the modulus M.sub.z or of the phase .sub.z of the complex image A.sub.z formed in the reconstruction plane, in this case the focusing plane P.sub.focus. In the observation image I.sub.obs the particles of interest 10.sub.i correspond to a region of interest ROI.sub.i having a predetermined shape. Because of the presence of the sphering agent, this is a circular shape, each particle of interest 10.sub.i forming a disc. A morphological analysis of the image of the modulus or of the phase makes it possible to detect each region of interest ROI.sub.i associated with a particle of interest 10.sub.i. This step also makes it possible to obtain a number N.sub.i of particles of interest 10.sub.i.
[0094] The sample may comprise other particles 10.sub.j with shapes and/or sizes different to those of the particles of interest 10.sub.i. The morphological analysis of the modulus or of the phase makes it possible to discriminate the particles of interest 10.sub.i from the other part 10.sub.j.
[0095] Step 130: Estimation of the volume V.sub.i of each particle of interest 10.sub.i.
[0096] On the basis of the detection on the observation image I.sub.obs, of each region of interest ROI.sub.i associated with a particle of interest 10.sub.i, a dimension d.sub.i of the region of interest, for example the diameter, is determined, which makes it possible to estimate the volume V.sub.i of the associated particle of interest 10.sub.i, based on the assumption according to which the particle of interest is spherical. The dimension d.sub.i may initially be obtained as pixels then converted into m based on a calibration factor determined during a calibration phase with spherical particles of known volumes, or determined by a reference method. The assumption of sphericity of the particles of interest is validated by the presence of the sphering agent 10.sub.r in the sample.
[0097] Step 140: Determination of statistical parameters.
[0098] The term statistical parameter refers to a parameter characterizing the statistical distribution of the volume of the particles or characterizing the statistical distribution of the dimensions d.sub.i determined during step 130. It may in particular be a mean value, a median value or a dispersion parameter, for example the standard deviation .
[0099] This step may make it possible to determine statistical parameters of the volumes V.sub.i of particles of interest 10.sub.i estimated during step 130. For example, the mean volume
[0100] As an alternative, a mean dimension
[0101] When the particles of interest 10.sub.i are red blood cells, a mean cellular volume (VGM) is thus obtained. A dispersion indicator of the dimension d.sub.1 of the particles of interest may also be calculated, the dispersion indicator being, for example, the standard deviation of the dimensions d.sub.i. When the particles of interest are red blood cells, a distribution index (IDR) of the red blood cells may thus be determined. The conversion between the dispersion indicator of the dimension d.sub.i of the particles of interest and the distribution index may be carried out based on a calibration. The calibration makes it possible to establish a calibration function relating the dispersion indicator, for example , to the IDR of the calibration sample, the IDR of which is known.
[0102] Step 140 may also comprise the establishment of a distribution of the estimated volumes V.sub.i, or of the dimensions d.sub.i of the particles of interest, and the estimation of a dispersion parameter of such a distribution, for example a full-width at half-maximum or a full-width at one-tenth maximum. When the particles of interest are red blood cells, this makes it possible to determine a ratio usually referred to by the acronym RDW (Red blood cells Distribution Width).
[0103] Step 150: Determination of Volume Ratios
[0104] During this step, the total volume occupied by the particles of interest 10.sub.i in the observation field is estimated, and a ratio is calculated between the total volume of the particles of interest 10.sub.i and the sample volume in the observation field of the image sensor 16. When the particles of interest 10.sub.i are red blood cells, it is thus possible to determine the hematocrit (Ht) in the sample. The total volume of the particles of interest may be obtained by multiplying the mean volume of the particles of interest, resulting from step 140, by the number N.sub.i of particles of interest 10.sub.i, established during step 120
where V represents the volume of the sample.
[0105] This first embodiment was tested on blood samples, the results being discussed below in connection with the experimental tests and
[0106] Such a method is, however, sensitive to the determination of the focusing plane P.sub.focus in which the complex image is reconstructed. It assumes a certain coplanarity of the particles of interest.
[0107] The Inventors have developed a second embodiment making it possible to estimate the representative volume of the particles of interest on the basis of the image I.sub.0 acquired by the image sensor 16. The main steps of this method are described in connection with
[0108] Step 200: acquisition of an image I.sub.0 of the sample by the image sensor. This step is similar to step 100 described above.
[0109] Step 210: obtaining a stack of complex images. During this step, the propagation operator h is applied to an image obtained on the basis of the image I.sub.0 acquired during step 200, in order to obtain a stack of complex images A.sub.z at various distances from the detection plane P.sub.0. As mentioned above, the propagation operator may be applied to an image representing the square root {square root over (I.sub.0)} of the acquired image I.sub.0, optionally normalized by the mean value
[0110] According to a first variant, the propagation operator h is applied to the image I.sub.0 by successively considering various propagation distances z.sub.1 . . . z.sub.n between the detection plane and the sample. As many complex images A.sub.z.sub.
[0111] Also, according to a second variant which is represented in
[0112] According to a first possibility, the sample is illuminated successively or simultaneously in various spectral bands .sub.k, and an image I.sub.0(.sub.k) representative of each spectral band is obtained in the detection plane P.sub.0. The algorithm makes it possible to obtain a complex image A.sub.ref(.sub.k) of the sample 10 in the reference plane, in each spectral band .sub.k. The complex images thus obtained may be combined, for example by calculating a mean, at each pixel, of the modulus and of their phase, which makes it possible to form the reference image A.sub.ref. As an alternative, the complex reference image is a complex image A.sub.ref(.sub.k) in one spectral band .sub.k. Such an algorithm has been described in the publication S. N. A. Morel, A. Delon, P. Blandin, T. Bordy, O. Cioni, L. Herv, C. Fromentin, J. Dinten, and C. Allier, Wide-Field Lensfree Imaging of Tissue Slides, in Advanced Microscopy Techniques IV; and Neurophotonics II, E. Beaurepaire, P. So, F. Pavone, and E. Hillman, eds., Vol. 9536 of SPIE Proceedings (Optical Society of America, 2015) as well as in the patent application FR1554811 filed on 28 May 2015, and more precisely in the iterative steps 100 to 500 described in this application. It has been shown that the use of two or three different spectral bands makes it possible to obtain a complex reference image A.sub.ref having a good reconstruction quality.
[0113] According to a second possibility, which corresponds to a preferred variant, the complex reference image A.sub.ref is calculated on the basis of an image I.sub.0 acquired from the sample when the latter is illuminated in a single spectral band . The complex reference image may be obtained by using an iterative algorithm such as that described in the patent application FR1652500 filed on 23 Mar. 2016, and more precisely according to steps 110 to 160 described in said patent application.
[0114] Lastly, the complex reference image A.sub.ref may be obtained on the basis of the acquired image by means of other known reconstruction algorithms, one example being described in US2012/0218379.
[0115] The coordinate z.sub.ref, along the Z axis, of the reference plane P.sub.ref is determined either a priori, in particular when the position of the sample relative to the image sensor 16 is known, or by means of a numerical autofocus, based on a clarity criterion of the reference image A.sub.ref, the latter being clearer when the reference plane corresponds to the plane in which the particles are located. The clarity criterion may be applied to the image of the modulus M.sub.ref or of the phase .sub.ref of the reference image.
[0116] The complex image A.sub.ref,z is referred to as being a reference image because it is used as a basis for obtaining so-called secondary complex images A.sub.ref,z during a step 214 along the propagation axis Z. During this step, the complex reference image A.sub.ref is propagated according to a plurality of reconstruction distances z by using a propagation operator h as defined above, so as to provide a plurality of so-called secondary complex images A.sub.ref,z reconstructed at the various distances z from the reference plane P.sub.ref. Thus, this step comprises the determination of a plurality of complex images A.sub.ref,z such that:
A.sub.ref,z=A.sub.ref .Math.h.sub.z with z.sub.1zz.sub.n.
[0117] The values z.sub.1 and z.sub.n are the minimum and maximum coordinates, along the Z axis, between which the complex reference image is propagated. Preferably, the complex images are reconstructed according to a plurality of z coordinates between the sample 10 and the image sensor 16. The Inventors assessed that it was preferable to obtain secondary complex images on either side of the reference plane P.sub.ref, such that z.sub.1z.sub.refz.sub.n. Preferably, two adjacent reconstruction planes are separated from one another according to a fine mesh size, lying for example between 1 m and 50 m, and example 5 m or 10 m. This is a local propagation because it is carried out according to a distance of between 10 m and 2 mm on either side of the reference plane P.sub.ref, for example at 200 m. In contrast to the image I.sub.0 acquired by the image sensor 16, the complex reference image A.sub.ref advantageously describes the exposure light wave 14, particularly in terms of its phase. Consequently, it is assessed that the secondary images A.sub.ref,z obtained by propagation of the reference image A.sub.ref form a good descriptor of the exposure light wave 14 in the various reconstruction planes. Thus, the secondary complex images are calculated rapidly without the need to use an iterative method, such as that used for calculating the complex reference image A.sub.ref. The method consisting in applying an iterative algorithm in order to establish a complex reference image A.sub.ref (step 212), then in the obtaining secondary complex images by applying a propagation algorithm h to a complex reference image (step 214), makes it possible to obtain a stack of complex mages A.sub.ref,z.sub.
[0118] According to another embodiment, an iterative reconstruction method such as that described above is used on the basis of the acquired image I.sub.0 by successively considering various reconstruction distances z.sub.1 . . . z.sub.n. A stack of complex images A.sub.z.sub.
[0119] Whatever the variants used to obtain the stacks of complex images, at the end of step 210 a stack of complex images is provided which makes it possible to ascertain a complex expression A(x,y,z) of the exposure light wave 14 at various distances z from the detection plane P.sub.0. The stack of complex images is schematized in 4C.
[0120] Step 220: Detection of Particles of Interest 10.sub.i and their Planar Coordinates (x.sub.i,y.sub.i).
[0121] This step consists in obtaining the planar coordinates (x.sub.i,y.sub.i) of particles of interest 10.sub.i in the radial plane XY. This step may be carried out based on the image acquired by the image sensor, but it is generally preferred to carry it out based on an observation image I.sub.obs formed on the basis of a complex image in the stack of complex images which is established during step 210. The observation image I.sub.obs corresponds, for example, to the image of the modulus M.sub.zor of the phase .sub.z of the complex image A.sub.z taken into account.
[0122] Preferably, a complex image established in a plane in which the sample extends is taken into account. In the observation image I.sub.obs, each particle of interest 10.sub.i is associated with a region of interest ROI.sub.i having a predetermined shape. The localization of each region of interest ROI.sub.i may be carried out automatically. To this end, as described in connection with step 120 of the first embodiment, the particles of interest 10.sub.i are detected by morphological analysis. The morphological analysis may take into account one or more morphological criteria corresponding to a region of interest ROI.sub.i, for example its area. Algorithms based on spatial correlation with predetermined shapes may also be used.
[0123] The sample may comprise particles 10.sub.j other than the particles of interest 10.sub.i to be analyzed. In this case, the morphological analysis described above may make it possible to discriminate the particles of interest from the other particles 10.sub.j. Classification algorithms based on shape criteria may be used to make it possible to distinguish between the particles of interest 10.sub.i and the other particles 10.sub.j.
[0124] The position (x.sub.i,y.sub.i), in the radial plane XY, of the particles of interest 10.sub.i detected is then determined by considering, for example, the centroid of each region of interest ROI.sub.i resulting from the morphological analysis. This step also makes possible to count a quantity of particles of interest N.sub.i in the observation field of the image sensor.
[0125] In
[0126] Step 230: Formation of a Profile Associated with each Particle of Interest.
[0127] On the basis of each complex image forming the stack of images resulting from step 210, a characteristic quantity of the exposure light wave 14 is estimated at each planar position (x.sub.i,y.sub.i) determined during step 220, and at a plurality of distances z from the detection plane P.sub.0, then a profile representing the variation of the characteristic quantity along the propagation axis Z is formed. The characteristic quantity may, in particular, be established on the basis of the modulus and the phase of the exposure light wave 14. It may be the modulus, the phase, or a combination thereof. At the end of this step, a profile corresponds to each particle of interest 10.sub.i. Such a profile is schematized in
[0128]
[0129] The inventors have observed that, when the particles of interest are red blood cells, it is preferable to form the profiles based on the modulus of the complex expression describing the exposure light wave 14.
[0130] Step 240: Estimation of Profile Parameters Respectively Corresponding to Various Particles of Interest 10.sub.i.
[0131] On the basis of the profile associated with each particle of interest 10.sub.i resulting from step 230, an estimation of a parameter p, is carried out. The parameter p.sub.i of each profile is obtained by applying a metric to said profile. Thus, each particle of interest 10.sub.i corresponds to a parameter p.sub.i via the profile associated with said particle, for example the phase profile .sub.i(z) and/or the modulus profile M.sub.i(z). A mean value
[0132] The metric applied to each profile may be one of the metrics listed below: [0133] a slope or a mean slope of a profile; [0134] a width of the profile between two points of the profile; [0135] an area delimited by the profile between two points of the profile; [0136] a minimum or maximum value of the profile.
[0137]
[0141] The term metric refers to a function applied to the profile so as to obtain a parameter corresponding to the particle associated with the profile. This parameter may be a scalar value or a vector characterizing the profile and making it possible to obtain a quantitative value representative of a volume of a particle of interest.
[0142]
[0146] At the end of step 240, an estimate of the mean cellular volume is provided. One or more steps described below may then be carried out.
[0147] Step 250: Determination of Statistical Parameters
[0148] This step is similar to step 140 of the first embodiment, considering the dispersion of the parameter p.sub.i of each profile. As mentioned above in the description of step 140, the term statistical parameter refers to a parameter characterizing the statistical distribution of the volume of the particles or characterizing the statistical distribution of the parameters p.sub.i. It may in particular be a dispersion parameter, for example the standard deviation of the parameter p.sub.i. The latter may be used to estimate the distribution index IDR. The relationship between the IDR and the standard deviation of the parameter p.sub.i, or more generally the dispersion indicator of the parameter p.sub.i, may be an empirical relationship established during a calibration phase using calibration samples whose IDR is known.
[0149] Step 260: Determination of Volume Ratios.
[0150] This step is similar to step 150 of the first embodiment.
[0151] Experimental Tests
[0152] The embodiments described above were subjected to experimental tests under the following conditions: [0153] Sample 10: this is human blood diluted to 1/600 in a phosphate buffer PBS, to which a concentration of 100 mg/l of sphering agent 3-(N,N-dimethyldodecylammonio)propanesulfonate. [0154] Light source 11: Cree MC-E Color light-emitting diode, comprising three light-emitting diodes that can be activated simultaneously or successively, each diode respectively emitting in the following spectral bands : 440 nm-460 nm; 500 nm-540 nm; 624nm-648 nm. As an alternative, a laser diode emitting at 405 nm and with a power of less than 5 mW was also used. [0155] Fluidic chamber 15: Countess chamber with a thickness of 100 m arranged on the image sensor, or glass chamber with a thickness of 100 m. [0156] Image sensor 16: CMOS Aptina MT9J003 monochrome 38842764 pixel sensor, each pixel measuring 1.67 m on a side, the detection surface extending over about 30 mm.sup.2. In view of the thickness of the fluid chamber, the sample volume addressed by each image amounts to about 2.8 l. [0157] Distance D between the light source 11 and the sample 10: between 2 cm and 30 cm. [0158] Diameter of the aperture of the spatial filter 18: 150 m, such a filter not being necessary when the light source is a laser diode.
[0159] In a first series of tests, the first embodiment described in connection with
[0160] Various blood samples were then tested.
[0163] The reference measurements were carried out by using the HORIBA ABX Pentra 120 DX device. In order to evaluate the effect of the sphering agent, the method described in connection with
[0164] In a second series of tests, the second embodiment described in connection with steps 200 to 250 was tested. During these tests, the light source 11 was a laser diode.
[0165]
[0166] During these experimental tests, various samples were considered and, for each of them, a mean cellular volume (VGM) was determined with the aid of a Horiba ABX Pentra120 DX device. For each sample, steps 200 to 230 of the method described above were carried out so as to detect the red blood cells, to determine their planar position and, for each of them, to obtain a profile describing the variation along the propagation axis Z of the modulus of the complex expression describing the light wave 14, the axis of each profile passing through each planar position. A metric was applied to each profile and a mean metric was obtained for example. For example, a mean metric was calculated, making it possible to estimate the mean cellular volume of the sample.
[0167]
[0168]
[0169] The results presented in
[0170]
[0171] In
[0174] Each figure represents the mean cellular volume of a sample (ordinate axis) as a function of a mean value of metrics applied to modulus profiles established along an axis passing through each red blood cell detected (abscissa axis).
[0175] The r.sup.2 correlation coefficients of
[0176] The second embodiment was carried out in order to estimate the mean cellular volume VGM, the hematocrit Ht and the distribution index IDR of blood samples.
[0177] Other metrics were used, for example the full-width at half-maximum of the peak formed by each profile, corresponding to the metric M2.
[0178] The metric M3 described in connection with
[0179] Tests were also carried out while replacing the laser light source with the light-emitting diode as described above. The results are also found to be conclusive.
[0180] As mentioned above, the spherical shape of the particles makes it possible to overcome the uncertainties associated with their orientations.
[0181]
[0182]
[0183] Although described in relation to characterization of red blood cells, the invention applies to other particles that may be deformed by a sphering agent, when the intention is to obtain a rapid and reliable estimate of the volumes. Furthermore, although described in relation to the determination of a mean volume of particles of interest, the invention may be applied to other volumes characterizing the particles of interest: without limitation, this may be a median volume or the volume of each particle of interest.