MEDICINAL AMBROSIA PLANT EXTRACTS

Abstract

Phytoceutical compositions from organic extracts of the Ambrosia maritima or Ambrosia hispida plants and uses thereof for treatment of cancers is described.

Claims

1. A method of preparing a sesquiterpene lactone-containing extract for pharmaceutical use, wherein the method comprises: a) treating a plant of Ambrosia maritima with an organic solvent in which one or more sesquiterpene lactones is soluble; b) evaporating the organic solvent to produce a crude extract; c) subjecting the crude extract to chromatography using a second organic solvent to obtain a clean extract of said one or more sesquiterpene lactones; and; d) collecting fractions of the individual one or more sesquiterpene lactones.

2. The method of claim 1, wherein said organic solvent is polar.

3. The method of claim 1, wherein said organic solvent is the same as said second organic solvent.

4. The method of claim 1 further comprising the step of mixing the fractions of the individual one or more sesquiterpene lactones with pharmaceutically acceptable carrier, a diluent and/or an excipient.

5. A method of preparing a sesquiterpene lactone-containing extract for pharmaceutical use, wherein the method comprises: a) treating a plant of Ambrosia hispida with an organic solvent in which one or more sesquiterpene lactones is soluble; b) evaporating the organic solvent to produce a crude extract; c) subjecting the crude extract to chromatography using a second organic solvent to obtain a clean extract of said one or more sesquiterpene lactones; and; d) collecting fractions of the individual said one or more sesquiterpene lactones.

6. The method of claim 5, wherein said organic solvent is polar.

7. The method of claim 5, wherein said organic solvent is the same as said second organic solvent.

8. The method of claim 5 further comprising the step of mixing the fractions of the individual one or more sesquiterpene lactones with pharmaceutically acceptable carrier, a diluent and/or an excipient.

9. A composition, comprising an organic extract of Ambrosia maritima or Ambrosia hispida together with a pharmaceutically acceptable carrier, wherein said organic extract is at least 100 fold more stable as compared against a raw cellular extract of Ambrosia maritima and said organic extract is at least 1000 fold more concentrated than in said raw cellular extract.

10. A composition, comprising an organic extract of Ambrosia maritima or Ambrosia hispida together with a pharmaceutically acceptable carrier, wherein said organic extract is at least 1000 fold more stable as compared against a raw cellular extract of Ambrosia maritima and said organic extract is at least 10000 fold more concentrated than in said raw cellular extract.

Description

BRIEF DESCRIPTION OF THE DRAWINGS

[0055] FIG. 1A. Chemical structure of exemplary SL Ambrosin with arrows pointing to the Michael reaction points.

[0056] FIG. 1B. Chemical structure of three additional exemplary SLs found in Ambrosia plants.

[0057] FIG. 1C. Chromatographic fingerprints of sesquiterpene lactones extracted from Ambrosia maritima.

[0058] FIG. 1D. Chromatographic fingerprints of sesquiterpene lactones extracted from Ambrosia hispida.

[0059] FIG. 2A shows the binding of Ambrosin and the inhibition of p65 subunit of Nf-kappa-B to disrupt the Nf-kappa-B/DNA interaction.

[0060] FIG. 2B shows another view of the Ambrosin binding to NF-B DNA docking domain at Cys122 and Cys 207.

[0061] FIG. 2C shows the Ambrosin (cluster of spheres) binding to NF-B DNA docking domain at Cys122 and Cys 207.

[0062] FIG. 2D shows a second view of the sesquiterpene lactone binding to NF-B P65.

[0063] FIG. 3 displays gel electrophoresis (western blots) showing the results of sesquiterpene lactones (50 g/mL) inhibition of the important cancer related members of ErbB Family as well as p65 expression in multiple bladder cancer cell lines.

[0064] FIG. 4A shows the binding of one of the sesquiterpene lactones (spheres) to STAT3 to disrupt its binding to DNA. The sesquiterpene lactone Ambrosin binds the Cys 251 and Cys 328. FIG. 4B displays a close up of the binding region in FIG. 4A.

[0065] FIG. 5A displays the sesquiterpene lactone Ambrosin linking the two Caspase-7 homodimers. A close up of the interaction with symmetry related Cys290 and Cys 290 side chains leading to the stabilization of the homodimer is show in FIG. 5B.

[0066] FIG. 6A displays a sesquiterpene lactone linking the GTP binding site of Rho family GTPases. A close up of this linkage showing the SL binding to the Cys 157 and Cys 18 is show in FIG. 6B.

[0067] FIG. 7 displays cell concentration as assayed by MTS for various cancer related cell lines after exposure to various concentrations of the sesquiterpene lactones extracted from the Ambrosia maritima plant.

[0068] FIG. 8 displays cell concentration as assayed by MTS for various cancer related cell lines after exposure to low concentrations of sesquiterpene lactones extracted from the Ambrosia maritima plant.

[0069] FIG. 9 displays a phosphokinase array that illustrates the effect of 25 g/mL of the sesquiterpene lactones extracted from Ambrosia maritima on cancer related signaling proteins in UM-UC-6 bladder cancer and MCF7 breast cancer.

[0070] FIG. 10 displays histopathology of Epidermal Growth Factor Receptors and Ki-67 in control mice xenografted with UM-UC-6 cells and mice injected with UM-UC-9 cells but treated using sesquiterpene lactones extracted from Ambrosia maritima. The concentration of the sesquiterpene lactones were 100 g/dose.

[0071] FIG. 11A displays histopathology of orthotopically injected SUM-159 breast cancer cells in control mice (top) and mice treated with sesquiterpene lactones extracted from Ambrosia maritima.

[0072] FIG. 11B displays histopathology of orthotopically injected MDA-MB-231 breast cancer cells in control mice (top) and mice treated with sesquiterpene lactones extracted from Ambrosia maritima.

[0073] FIG. 11C displays results for orthotopically injected MDA-MB-231 triple negative breast cells treated with an organic extract containing all sesquiterpene lactones from Ambrosia maritima, purified sub fractions containing Ambrosin only, and purified sub fractions containing Damsin only.

[0074] FIG. 12 displays results of tumor weight of mice xenografted with PC-3, UM-UC-9.sup.LUC, or UM-UC-10.sup.LUC bladder cell lines with and without daily sesquiterpene lactones treatment.

[0075] FIG. 13 displays the histopathology of UM-UC-5.sup.LUC bladder cell line orthotopically injected into animals and the bladder weights for both control mice and mice treated with the organic extraction of sesquiterpene lactones extracted from Ambrosia maritima at a dose of 200 g/day.

[0076] FIG. 14 displays the histopathology of UM-UC-10.sup.LUC bladder cell line orthotopically injected into animals and bladder weights for both control mice and mice treated with the organic extraction of sesquiterpene lactones extracted from Ambrosia maritima at a dose of 200 g/day.

[0077] FIG. 15 displays images of spheres form from different bladder cell lines that have been treated (right column) with sesquiterpene lactones or left untreated (left column).

[0078] FIG. 16 displays a Sphere Formation Assay for secondary spheres formed from UM-UC-9 and treated with sesquiterpene lactones.

[0079] FIG. 17 displays a Sphere Formation Assay for tertiary spheres formed from UM-UC-9 and treated with sesquiterpene lactones.

[0080] FIG. 18 displays results of IC.sub.50 experiments on UM-UC-5 bladder cancer cell lines treated with the sesquiterpene lactones found in the organic extract of Ambrosia maritima.

[0081] FIG. 19A-D displays results of IC.sub.50 experiments on bladder cancer cell lines treated with specific sesquiterpene lactones purified from the organic extracted of Ambrosia maritima. The purified sesquiterpene lactones are Parthenin, Ambrosin, Damsin, and Neoambrosin. The bladder cancer cell lines are UM-UC-17 (FIG. 19A), UM-UC-9 (FIG. 19B), UM-UC-15 (FIG. 19C), and UM-UC-7 (FIG. 19D).

[0082] FIG. 20A displays results of IC.sub.50 experiments on UM-UC-5 bladder cancer cell lines treated with the sesquiterpene lactones found in the organic extract of Ambrosia hispida. FIG. 20B displays results of IC.sub.50 experiments on UM-UC-9 bladder cancer cell lines treated with the sesquiterpene lactones found in the organic extract of Ambrosia hispida. FIG. 20C displays the results of IC.sub.50 experiments on bladder cancer cell lines treated with purified Ambrosin from the organic extracted of Ambrosia hispida.

[0083] FIG. 21A displays results of IC.sub.50 experiments on breast cancer cell line SUM159 and FIG. 21B displays results for breast cancer cell line MDA-MB-231 treated with the organic extraction of sesquiterpene lactones extracted from Ambrosia maritima.

[0084] FIG. 22 displays results of IC.sub.50 experiments on breast cancer cell line MDA-MB-231 treated with specific sesquiterpene lactones purified from the organic extracted of Ambrosia maritima. The purified sesquiterpene lactones are Parthenin, Ambrosin, Damsin, and Neoambrosin.

[0085] FIG. 23 displays results of IC.sub.50 experiments on breast cancer cell line MDA-MB-468 treated with specific sesquiterpene lactones purified from the organic extracted of Ambrosia maritima. The purified sesquiterpene lactones are Parthenin, Ambrosin, Damsin, and Neoambrosin.

[0086] FIG. 24 displays results of IC.sub.50 experiments on breast cancer cell line BT-474 treated with specific sesquiterpene lactones purified from the organic extracted of Ambrosia maritima. The purified sesquiterpene lactones are Parthenin, Ambrosin, Damsin, and Neoambrosin.

[0087] FIG. 25A-B displays results of IC.sub.50 experiments on breast cancer cell line MDA-MB-231 (25A) and BT-20 (25B) treated with sesquiterpene lactones found in the organic extract of Ambrosia hispida. FIG. 25C-D displays the results of IC.sub.50 experiments on breast cancer cell line MDA-MB-231 (25C) and BT-20 (25D) treated with Ambrosin purified from the organic extract of Ambrosia hispida.

[0088] FIG. 26A-B display efficacy and IC.sub.50 experiments performed on lung cancer cell lines SK-LU-1 (FIG. 26A) and A549 (FIG. 26B).

[0089] FIG. 27 display efficacy and IC.sub.50 experiments performed on pancreatic cancer cell lines ASPC-1.

[0090] FIG. 28A-D displays results IC.sub.50 experiments on prostate cancer cell line for different purified sub fractions (1=Parthenin, 3=Ambrosin, 4=Damsin, 5=Neoambrosin) of the organic extraction wherein the IC.sub.50 is 4.878 (28A), 2.715 (28B), 1.160 (28C) and 264.5 (28D). The concentration is in mol.

DESCRIPTION OF EMBODIMENTS OF THE DISCLOSURE

[0091] The invention provides plant based compounds and novel methods pertaining to their use in cancer treatments. In particular, the organic extract from Ambrosia maritima and/or Ambrosia hispida plants in the Asteraceae family is used for treatment of various cancers. One particular group of components in the organic extract, sesquiterpene lactones, have been found to interfere with a variety of molecular signal pathways in cancer progression and to reduce the tumor(s), thus enabling effective cancer treatment. Further, the organic extract can be combined with other cancer fighting compounds or therapeutics that address other signal pathways for a more complete treatment.

[0092] The present methods includes any of the following embodiments in any combination(s) of one or more thereof: [0093] A method of treating cancer, comprising administering an effective amount of a composition comprising an organic extract of Ambrosia maritima or Ambrosia hispida, together with a pharmaceutically acceptable carrier to a patient with cancer. In particular, the cancers are bladder cancer, prostate cancer, triple negative breast cancer, lung cancer and pancreatic cancer. The effective amount of the composition is administered daily for at least 6 weeks. Further, the organic extract comprising at least one sesquiterpene lactone is protein free, thus is less pyrogenic. [0094] A method of treating cancer, comprising administering an effective amount of a composition comprising sesquiterpene lactones extracted from Ambrosia maritima or Ambrosia hispida together with a pharmaceutically acceptable carrier to a patient with cancer. In particular, the cancer is bladder cancer, prostate cancer, or triple negative breast cancer and the effective amount of the composition is administered daily for at least 6 weeks. [0095] A method of reducing cancer metastasis comprising administering an effective amount of a composition comprising sesquiterpene lactones extracted from Ambrosia maritima or Ambrosia hispida together with a pharmaceutically acceptable carrier to a patient with cancer. [0096] A method for enhancing the inhibition of p65, STAT3, GPR30, EGFR family of receptors, -catenin pathway and Rho-GTpase family activity in a patient, comprising administering an effective amount of a composition comprising sesquiterpene lactones extracted from Ambrosia maritima or Ambrosia hispida together with a pharmaceutically acceptable carrier to a patient. [0097] A method of preparing a sesquiterpene lactone-containing extract for pharmaceutical involving treating an Ambrosia maritima plant with an organic solvent in which at least one said sesquiterpene lactone is soluble, evaporating the organic solvent to produce a crude extract, running or passing the crude extract through a chromatographic separation using a second organic solvent to obtain a clean extract of the sesquiterpene lactone(s), and collecting fractions of the individual sesquiterpene lactone(s). [0098] A method of preparing a sesquiterpene lactone-containing extract for pharmaceutical involving treating an Ambrosia hispida plant with an organic solvent in which at least one said sesquiterpene lactone is soluble, evaporating the organic solvent to produce a crude extract, running or passing the crude extract through a chromatographic separation using a second organic solvent to obtain a clean extract of the sesquiterpene lactone(s), and collecting fractions of the individual sesquiterpene lactones.

[0099] The sesquiterpene lactones (SLs) in the present methods can be used to target a variety of cancer-specific signal pathways. The examples below demonstrate the effect of SLs on cancer cell proliferation pathways (i.e. NF-B and STAT3) and promoting apoptotic cell-death pathways (i.e. Caspases 3, 7, and 6) and its interactions with G protein coupled receptors. However, it is expected that SLs can also affect other signal pathways and the examples should not be construed as to limiting the mechanisms by which the SL affect cancer.

[0100] Once the proof of concept of the SL affecting various cancer-specific signal pathways was determined, a series of in vitro experiments using bladder cancer cell lines, breast cancer cell lines, and prostate cancer cell lines were performed to prove efficacy.

[0101] Not all signal pathways involved in cancer formation, growth, and progression are known. Thus, the following examples are intended to be illustrative only, and not unduly limit the scope of the appended claims. Further, though on a limited number of cancer cell lines were utilized, the present treatment methods are expected to be useful for treatment of most cancers, either alone or in combination with other treatment modalities.

EXTRACTION METHOD

[0102] Briefly, the extraction uses an organic solvent such as methanol, ethanol and any carbon based solvents. The whole organic extract would be dried and chemically fractionated with chloroform. The final step is to pool the best fractions and evaporate the chloroform. The final product can then be used in treatment.

[0103] In more detail, the extraction method of Ambrosia maritima can be as follows:

[0104] 1) Dried whole Ambrosia maritima plant is powdered using conventional means.

[0105] 2) The powdered plant is brought into contact with an organic solvent or combination of organic solvent and allowed to contact for a predetermined amount of time for the SLs in the dried plant to move into the organic phase.

[0106] 3) The organic solvent(s) is then separated from the dried plant material.

[0107] 4) The organic extract is dried by any known means in the art.

[0108] 5) The dried extract is chemically fractionated with chloroform and fractions rich in the requisite SLs pooled.

[0109] 6) The chloroform is evaporated, leaving behind the dried, pharmaceutically active components.

[0110] 7) Different concentrations of the active components are used in treating various cancer cell lines.

[0111] The same extraction steps can be performed for Ambrosia hispida and other plants in the plants in the Asteraceae family.

[0112] Other extraction methods can be employed, as suitable for organic soluble components. For example, such methods include, aqueous two-phase systems, acid/base extractions, and the like. To prepare the plant for extraction the plant should be dried in air with no heat then could be further processed by freeze thawing cycles, and/or physically lysed by freezing and thawing before extraction, and the like.

[0113] The active ingredient or ingredients of the organic extract of the plant material can combined with other active ingredients before use, but preferably are used alone. The active ingredient or ingredients of the organic extract of plant material can be used as is, or can be formulated with known pharmaceutically acceptable carriers, diluents and/or excipients.

[0114] For example, gelatin capsules containing dried organic extract can be produced containing a suitable dose of the active ingredient(s). Optionally, packets containing the dried extract can be provided for mixture with e.g., hot fluids, to be taken orally. The extract can also be formulated with solid carriers for pressing into pill forms, especially with delayed release excipients for formulating once a day tablet forms or any pharmaceutical form that will be orally administered.

[0115] It may also be possible to prepare forms of the active ingredients suitable for non-oral routes of administration, such as inhalational, buccal, sublingual, nasal, suppository or parenteral dosage forms.

[0116] The above extract is significantly more stable than the natural product, even in liquid form and especially when formulated with a buffer and a chelator. It is also significantly more concentrated than the natural form, thus providing efficacy without having to consume vast quantities of plant material. Further, the dosage is much more easily controlled with concentrated, partially purified or purified material.

[0117] We also used TLC and HPLC to further purify the active ingredient(s) to be further studied and to determine their efficacy, although this work is ongoing. The removal of certain components from the organic extract, through the additional purification step can lead to fewer side effects. Ambrosia maritima and Ambrosia hispida are ragweed, which is known for its allergenic effects. Thus, purification of the organic extract will lead to a reduced immune response in humans. In some embodiments, purified material from the organic extract of the Ambrosia maritima and Ambrosia hispida can serve to improve the ability to interrupt signal pathways in cancer cells and increase stability of the extracted material.

NF-Kappa B Pathway

[0118] The common molecular mechanisms of cancer growth include: [0119] Self-sufficiency in growth and loss of growth inhibitor mechanisms [0120] Suppression of apoptotic threshold [0121] Enhanced angiogenic properties [0122] Ability to invade local tissue and metastasize to different sites

[0123] Each of these cellular processes is known to be affected by the NF-B pathway. NF-B is a protein complex widely used by eukaryotic cells as a regulator of genes that control cell proliferation and cell survival. In mammalian cells, the NF-B family is composed of five members: RelA (p65), RelB, c-Rel, p50/p105 (NF-B1) and p100 (NF B2). Under most basal conditions NF-B complexes are maintained in an inactive form primary through interactions with the inhibitor of B (IB) family of proteins. Cancer, however, is a disease that stems from diverse etiologies that harbor distinct affected cell targets, therefore shows a very complex nature. In cancerous cells proliferation and homeostasis are greatly altered. Thus, the NF-B complexes become quickly misregulated. As such, many different types of human tumors have misregulated NF-B: that is, NF-B is constitutively active. One important area of cancer research is focused on targeting the constitutively active NF-B in cancer cells.

[0124] The sesquiterpene lactone-containing organic extracts from the Ambrosia maritima were tested to determine the effects, if any, on the NF-B pathway. Looking at computational docking analysis, there was a potential binding site. The binding site was was confirmed by western blotting where we observed an inhibition of p65 (RelA) within 30 minutes of treating the cells.

[0125] FIG. 2A-D displays the binding prediction of one sesquiterpene lactone, Ambrosin, to the NF-B/DNA binding domain. The arrow in FIG. 2A shows that the Ambrosin (cluster of spheres) can bind with the NF-B to disrupt its bind to DNA (helical structure in center of diagram) at the P65 unit. Because of the two Michael reaction sites, this sesquiterpene lactone is expected to bind to the Cys 122 and Cys 207 on the NF-B structure, as shown in FIGS. 2B and 2C. By binding to one or both in a selective binding way, the Ambrosin blocks these cysteines and the NF-B is no longer available as a transcription factor for DNA binding, thus slowing the progression of the tumor.

[0126] The ability of a sesquiterpene lactone to block the NF-B/DNA binding was tested using four bladder cancer cell lines: UM-UC-6 (H.B. Grossman University of Texas M.D. Anderson Cancer Center), UM-UC-9 (H.B. Grossman University of Texas M.D. Anderson Cancer Center), UM-UC-10 (H.B. Grossman University of Texas M.D. Anderson Cancer Center), SW-780 (ATCC).

[0127] FIG. 3 displays the gel electrophoresis results for 50 g/mL of sesquiterpene lactones, extracted from Ambrosia maritima, on UM-UC-6, UM-UC-9, UM-UC-10, and SW-780 cell lines. The sesquiterpene lactones inhibited EGFR, HER-2, HER-3 in all four bladder cancer cell lines. Of particular importance is the inhibition of HER-2. HER-2 is one of the transcriptional target genes of p65 NF-B. Its inhibition by the addition of the organic extract containing sesquiterpene lactones confirms the ability to disrupt NF-B/DNA binding and substantiates the proposed mechanism in FIG. 2. Thus, the SLs inhibit the EGFR family of receptors.

STAT3

[0128] Normal cellular responses to cytokines, growth factors and other polypeptide ligands are mediated by a family of latent cytoplasmic transcription factors called Signal Transduction and Activator of Transcription (STAT). Aberrant STAT3 leads to the induction of cellular and biological processes including proliferation, differentiation, survival, development, inflammation, invasion and metastasis in cancer.

[0129] Many human malignancies had been shown to harbor constitutively active STAT3 that contribute to many cellular and biological processes within the cancer cells.

[0130] By targeting and inhibiting the DNA-binding domain of STAT3, we can inhibit the transcriptional activity of STAT3. Physical interaction of STAT3/DNA binding domain with the consensus DNA-binding sequence in the promoter region of responsive genes is a very important step for STAT3 function. The disruption of the protein DNA interactions by sesquiterpene lactones has the potential to inhibit STAT3-dependent gene transcription blocking its tumor promoting functions.

[0131] FIG. 4A-B shows a proposed mechanism by which the extracted sesquiterpene lactones may link the Cys 328 and Cys 251 on the DNA binding domain of the STAT3. This linkage would block the binding of DNA and disrupt transcription, thus slowing growth of the cancer.

[0132] Using protein kinase arrays, STAT3, STATS and STATE were all determined to be affected by treatment of the cells with SLs extracted from Ambrosia maritima. More tests will be performed to show that SLs can disrupt STAT3/DNA binding.

Caspase Stability

[0133] Apoptosis or controlled cell death occurs in response to many different environmental stimuli or because of disease conditions. During apoptosis, morphological and biochemical changes trigger the breakdown of cellular processes and compartments. Defective apoptosis represents a major causative factor in the development and progression of cancer. Further, the ability of tumor cells to evade engagement of apoptosis can play a significant role in their resistance to conventional therapeutic regimens.

[0134] One of the most conserved biochemical features of apoptotic cell death is the activation of caspases. Caspases (cysteinyl-directed aspartate-specific proteases) are a family of highly specific proteases that play a key role during the apoptotic cell death. Caspases are grouped as either initiators or effectors of apoptosis, depending on where they enter the cell death process. The initiator caspases are present as monomers (i.e. inactive pro-forms) that must dimerize for full activation whereas effector caspases are present as dimeric zymogens that must be processed for full activation. Once activated, the effector caspases cleave other zymogen protein substrates within the cell, to trigger a cascade of caspase being activated and the apoptotic processe.

[0135] Caspase-3 and Caspase-7 are the major apoptotic executioner proteases and directly cleave most of the proteins that are proteolyzed during apoptosis. The effector caspase-3 and caspase-7 homodimers are activated by 2 protease nicks, producing an active tetrameric form with a 20 kDa and a 10 kDa chains. Stabilization of this tetramer promotes apoptosis.

[0136] SLs are able to stabilize the tetramer structure by forming a covalent crosslink across the molecular two-fold axis of symmetry. FIG. 5A displays Ambrosin linking the two Caspase-7 homodimers at Cys 290 and Cys 290. A close up of this linkage is shows in FIG. 5B. The interaction of the Ambrosin with the tetramer in these molecular models was confirmed by computational docking.

[0137] Without the SLs stabilizing the activated tetramers of Caspase-3 and Caspase-7, the tetramers would fall apart and be proteolyzed within 15-30 minutes, thus disrupting the apoptosis procedure. With the SL linkage, the tetramers are stable indefinitely in the active form and apoptosis proceeds as usual.

G-Protein Coupled Receptor 30 (GPR30)

[0138] The effects of all hormones, including steroids such as estrogen, are mediated by specific receptors that recognize and bind the hormone transmitting this information to downstream effectors. In triple negative breast cancer (TNBC) tumors, estrogen receptor a (ER-) and progesterone receptors are non-expressed and the Her/2neu gene is under expression. This makes it more difficult to treat since most chemotherapies target one of the three receptors, thus this class of breast cancer is not susceptible to endocrine therapy. Patient mortality with TNBC is double the mortality rate of ER- positive tumors. Hence, there is an urgent necessity for developing an innovative pharmacological targeted therapy for TNBC patients.

[0139] In recent years, a large number of reports have described membrane-associated estrogen receptors, either similar to or distinct from the classical nuclear estrogen receptors. These receptors have been postulated to mediate aspects of cellular estrogen function, including traditional genomic (transcriptional) signaling as well as novel non-genomic (rapid) signaling.

[0140] Estradiol, or more precisely, 17-estradiol, is a human sex hormone and steroid, and the primary female sex hormone. Most non-genomic rapid signaling events of 17-estradiol are due to G-protein coupled receptor 30 (GPR30). GPR30 in highly expressed and prevalent in TNBC and is associated with high recurrent and mortality rate of TNBC. The binding of GPR30 with 17-estradiol increases TNBC cell proliferation. Potent inhibitors that binding, targeting and inhibiting GPR30 are needed in TNBC treatment to block this receptor from binding to its ligand.

[0141] Molecular docking, a common computational tool for calculating binding affinities and predicting mode and binding sites, was performed on the ability of SLs to bind to the GPR30 receptor and prevent the reception of 17-estradiol. The molecular docking predicting the binding of sesquiterpene lactones to GPR30 at Cys-205 and Cys-130. Similar to the crosslinking of the two cysteine residues on STAT3, SLs are expected to bind both of these sites on the GPR30 and prevent the docking of the 17-estradiol. In practice, this will decrease the TNBC cell proliferation.

[0142] Additionally, the Rho family of GTPases is a family of small (21 kDa) signaling G proteins. The human Rho family of GTPases includes CDC42, RhoA, and Rac1. These proteins function to regulate cell migration, endocytosis, and cell cycle progression in normal cells. Disregulation of these critical regulatory proteins through the interaction with the Dbl onco-protein product leads to oncogenic cell transformation. Our molecular docking calculations strongly suggest that our plant derived sesquiterpene lactones can bind specifically adjacent to the GTP binding site of Rho family GTPases, thus displacing GTP and inactivating the enzyme (FIGS. 6A and 6B). This would effectively block the proliferation and migration of bladder, prostate and breast cancer cells upon treatment with the sesquiterpene lactones.

In Vitro Results

[0143] In vitro experiments were performed with multiple bladder and prostate cancer cell lines, which are shown in Table 1.

TABLE-US-00002 TABLE 1 Abbreviations of Cell lines Cell Lines Abbreviation Bladder cancer cell line (ATCC, Manassas, VA) J82 Bladder cancer cell line (ATCC, Manassas, VA) T24 Bladder cancer cell line (H.B. Grossman, University of Texas, M.D. UM-UC-10 Anderson Cancer Center, Huston TX) Bladder cancer cell line (ATCC, Manassas, VA) SW 780 Bladder cancer cell line (ATCC, Manassas, VA) 5637 Bladder cancer cell line (H.B. Grossman, University of Texas, M.D. UM-UC-9 Anderson Cancer Center, Huston TX) Lymphatic metastasis of prostate cancer (ATCC, Manassas, VA) LNCaP Bone metastasis of prostate cancer (Sellers, Dana-Farber Cancer Institute, C4-2B Boston, MA) Primary prostate cancer cell line (ATCC, Manassas, VA) PC-3 Bladder cancer cell line (ATCC, Manassas, VA) RT4 Bladder cancer cell line (H.B. Grossman, University of Texas, M.D. UM-UC-14 Anderson Cancer Center, Huston TX) Bladder cancer cell line (H.B. Grossman, University of Texas, M.D. UM-UC-5 Anderson Cancer Center, Huston TX) Breast cancer cell line (ATCC, Manassas, VA) SUM159 Breast cancer cell line (ATCC, Manassas, VA) MDA-MB-231 Breast cancer cell line (ATCC, Manassas, VA) MDA-MB-474 Breast cancer cell line (ATCC, Manassas, VA) MDA-MB-468

[0144] SLs in varying concentrations were added to the cell lines and the results were tabulated at 48 hours. For SL concentrations below 0.08%, DMSO was used to dissolve the compounds.

[0145] First, the cell viability was tested using an MTS assay and 50, 100, and 200 g/mL of SLs concentrations extracted from Ambrosia maritima, the results of which are shown in FIG. 7. All cell lines showed a significant decrease of cell viability in the SLs treated cells in comparison to the DMSO control cells. The concentration of DMSO used to dissolve SLs and in the control did not exceed 0.08%.

[0146] Lower concentrations of the SLs (10, 25 and 50 g/mL) were tested against multiple bladder cancer cell lines was tested for efficacy. FIG. 8 displays these results. At reduced concentrations of sesquiterpene lactones, the cells responded by exhibiting lower viability by MTS even at the lowest concentration of 10 g/mL. FIG. 9 is a phosphokinase array that illustrates the effect of 25 g/mL SL on cancer related signaling proteins in UM-UC-6 bladder cancer and MCF7 breast cancer. The phosphokinase array shows that the cell that had been treated with a concentration of 25 g/mL of SLs for a 3-hour treatment duration caused the inhibition of important signaling and energy proteins that are important in cancer cell survival, such as AMPK, TOR, beta-Cat and the like. The results of the phosphokinase array are also important in that they substantiate the proposed binding predictions in FIG. 2 et seq.

In Vivo Results

[0147] Thirty NOD-SCID mice were injected subcutaneously with 1 million UM-UC-6 cells. One week post injection, and after establishment of the tumor, a daily treatment with 4 g/g of SLs was started. The animals were sacrificed 6 weeks after the beginning of the daily treatments. The histopathology of the xenografted treated and control animals showing the amount of epidermal growth factor receptor (EGFR) and Ki-67 are shown in FIG. 10. EGFR is important in cancer progression and Ki-67 is indicative of mitotic activity. Here, the EGFR and Ki-67 were less in the treated animals. This indicates that cancer progression is inhibited by SLs daily treatment and there was less mitotic activity and less proliferation of the cancer.

[0148] Additional in vivo experiments were conducted for three breast cancer cell lines that were orthotopically injected into mice. Orthotopic injection of breast cancer cells is a powerful model to study all aspects of cancer growth. One million cells of each MDA-MB-231, SUM-159 and MDA-MB-468 were injected into the mammary fat pad of mice to form tumors. Once tumors were established, the tumors were treated with the SL-containing organic extraction of Ambrosia maritima at a dose of 200 M of total SLs/animal daily.

[0149] FIGS. 11A-B show the histopathology of the tumor area in the mice treated with the SLs extracted from Ambrosia maritima versus control animals for the SUM-159 and MDA-MB-231 cell lines. These results showed that the tumor size is smaller in the animals treated with SLs than the control.

[0150] FIG. 11C shows the results of the level of expression of HER2 and p65 in xenografted animals with MDA-MB-231 triple negative cell line and the corresponding bar graph that shows that inhibition for the control animals and animals treated with the SL organic extract, Ambrosin-only purified extract, and Damsin-only purified extract. The largest decrease of HER2 and p65 was seen with the SL organic extract, but significant improves were also seen with Ambrosin and Damsin only treatment. Thus, these components can be purified individually from the SL organic fraction and then combined as a potential treatment.

[0151] A comparison of tumor size for three different Luciferase-labeled cell lines were also performed and the results are shown in FIG. 12. In this series of experiments, the PC-3.sup.LUC and UM-UC-9 LUC lines were injected subcutaneously while the UM-UC-10.sup.LUC lines were injected intrabladder in NOD/SCID mice All before, all animals were treated daily for 6 weeks, however 100 g SL/animal was the dosage rate. The animals were sacrificed after 6 weeks of treatment and wet tumor weights were evaluated to examine the effect of SL on tumor growth. As evident in FIG. 12, there was a significant reduction in tumor size for all three cell lines when compared to the untreated mice. The confidence level for the differences was at least 95% for all three cell lines. These results indicate that SLs are potential pharmaceutical compounds for cancer treatment.

[0152] FIG. 13 illustrates the histopathology of UM-UC-5.sup.LUC orthotopically injected into animals treated with the organic extraction at a dose of 200 g of SLs/day. In the control animal EGFR and Ki-67 (anti Human) stained the tumor on the other hand there were reduced tumor in the treated animal. The same results were found in the UM-UC-10.sup.LUC orthotopically injected animal FIG. 14.

[0153] Similar results were obtained with prostate cancer and triple negative breast cancer cell lines.

Sphere Formation

[0154] In addition to the in vitro and in vivo experiments, the ability to prevent sphere formation using SLs was also tested.

[0155] Sphere-forming assays have been widely used to retrospectively identify stem cells based on their reported capacity to evaluate self-renewal and differentiation at the single cell level in vitro. We study the effects of SL on cancer progenitors (stem cells), sphere-forming assays were performed on cells after treatment with SLs.

[0156] FIG. 15 shows the images of the cell spheres for UM-UC-9 and 5637 bladder cell lines that have been treated with 25 g/mL SLs and untreated. At this concentration, there was a reduction of sphere formation of the UM-UC-9 cell line. Thus, as expected, UM-UC-9 showed less sphere formation than the 5637 cell lines.

[0157] The UM-UC-9 cells were also plated in low adherence plates with a Mammocult medium (Stem Cell Technologies, Inc.) and incubated for 7 days for primary sphere formation. Then, the primary formed spheres were collected and disrupted then plated in a low adherence, 96 well plate with approximately 200 cells/well. The next day, the cells were treated with various concentrations of SLs and the secondary (2ry) sphere formation was analyzed after 7 days. The secondary spheres are representative of the tumor progenitors population. As shown in FIG. 16, the SLs, in concentrations of 25, 50 and 100 g/mL, greatly reduced the secondary sphere formation as compared to the DMSO control treatment. For each concentration of SLs, total inhibition of the secondary spheres was seen.

[0158] Tertiary sphere formation was also tested and the results are shown in FIG. 17. Again, sphere formation was inhibited. The -catenin pathway is also a potential target for the tumor sphere inhibition by SLs.

[0159] Ability to reduce or inhibit sphere formation is further evidence of SL's pharmacological advantages in cancer treatment.

In Vitro Dose-Response Studies

[0160] MTS was used to evaluate IC.sub.50 (drug concentration causing 50% inhibition of the desired activity) for SLs on various bladder, prostate, breast, lung and pancreatic cancer cell lines.

[0161] Bladder Cancer Cell Line: The bladder cancer cell line UM-UC-5 was tested with Ambrosia maritima extracts. Cells were plated in a 96 well plate at a density of 1000 cells/well and 2000 cells/well. As shown in FIG. 18, the IC.sub.50 for the 1000 cells/well was 2.273 g/mL and the IC.sub.50 for the 2000 cells/well was 5.709 g/mL.

[0162] The MTS test was then conducted to evaluate the different IC.sub.50 of multiple cell lines. Purification was performed to separate the organic extract of SLs into different components. Micromolar doses, instead of micrograms, as determined by the molecular weight of the different SLs, Parthenin, Ambrosin, Damsin, and Neoambrosin, were tested in vitro. Ideally, for drug treatments, micromolar weights between 10-15 are preferred. Each cell line was plated at a density of 1000 cells/well and the IC.sub.50 results are shown in FIG. 19A-D and Table 2.

TABLE-US-00003 TABLE 2 IC.sub.50 results (in M) for bladder cancer cell lines and individual SLs PARTHENIN AMBROSIN DAMSIN NEOAMBROSIN UM-UC-17 6.318 1.346 2.856 31.80 UM-UC-9 14.19 6.248 4.726 141.6 UM-UC-15 4.9 0.9906 1.057 145.5 UM-UC-7 6.488 4.89 1.095 120.4

[0163] As expected from our other experiments, ambrosin and damsin had the best IC.sub.50 results. Even from UM-UC-9, which is a muscle invasive bladder cancer, the IC.sub.50 was well below the 10 M target range for drug treatments.

[0164] Though neoambrosin showed the least efficacy of these four SLs, it can still find use in treatments using the whole extraction or in combination with other SLs.

[0165] In review of the results between the SLs that were tested for their IC.sub.50, it can be concluded that different bladder cancer cell lines responded differentially to different SLs. Thus, there are different degrees of sensitivity of the different cell lines tested for bladder cancer.

[0166] Similar tests were performed with the organic extract from Ambrosia hispida. FIG. 20A-C displays results of the IC.sub.50 test for UM-UC-5 and UM-UC-9 bladder cell lines with the whole extract and with just Ambrosin purified from the organic extract.

[0167] Breast Cancer Cell Lines: Tumors that lack expression of estrogen receptor, progesterone receptor and less expression of HER2 are recognized as triple negative breast cancer (TNBC). TNBC tumors are further subdivided into molecular subtypes including the claudin-low tumors that have similar properties to stem cells in addition to features of epithelial-to-mesenchymal transitions. Interferon-rich subtype are tumors with better prognosis than normal breast like subtype.

[0168] Several TNBC cell lines were tested in vitro and were treated with serial concentrations of the extracted SLs from Ambrosia maritima to determine IC.sub.50. The results of the IC.sub.50 experiments for the SUM-159 (Basal, Claudin Low) and MDA-MB-231 (Basal, Claudin Low) cell lines are shown in FIG. 21A-B. The SLs showed efficacy in inhibiting triple negative breast cancers at various concentrations of SLs. Results are summarized in Table 3.

TABLE-US-00004 TABLE 3 IC.sub.50 results (in g/mL) for triple negative breast cancer cell lines treated with SLs extracted from Ambrosia maritima 1000 CELL/WELL 2000 CELL/WELL SUM159 5.124 9.145 MDA-231 6.883 14.15

[0169] The IC.sub.50 of the purified SLs, Parthenin, Ambrosin, Damsin, and Neoambrosin, were also tested for MDA-MB-231 cell line (FIG. 22), MDA-MB-468 (Basal Subtype Normal) cell line (FIG. 23), and BT-474 cell line (FIG. 24), an invasive ductal carcinoma cell line (luminal subtype B). Results are summarized in Table 4.

TABLE-US-00005 TABLE 4 IC.sub.50 results (in M) for breast cancer cell lines and individual SLs extracted from Ambrosia maritima PARTHENIN AMBROSIN DAMSIN NEOAMBROSIN MDA-MB-231 4.737 1.020 1.604 22.48 MDA-MB-468 1.227 0.8816 0.9349 9.078 BT-474 8.569 2.174 2.801 36.06

[0170] Like the results from the bladder cell tests, the cell lines were sensitive to different SLs. The most sensitive was seen with Neoambrosin, but Parthenin was also effective for BT-474.

[0171] Similar tests were performed with the organic extract from Ambrosia hispida. FIG. 25A-B displays results of IC.sub.50 experiments on breast cancer cell line MDA-MB-231 (25A) and BT-20 (25B) treated with sesquiterpene lactones found in the organic extract of Ambrosia hispida. FIG. 25C-D displays the results of IC.sub.50 experiments on breast cancer cell line MDA-MB-231 and BT-20 treated with Ambrosin purified from the organic extract of Ambrosia hispida.

[0172] As expected, the different cell lines had different sensitivities to the SLs extracts. Unexpectedly, both breast cancer cell lines had a greater IC.sub.50 from purified Ambrosin. This may be due to different molecular activity in different cell lines.

[0173] Lung Cancer Cell Lines: Efficacy and IC.sub.50 experiments were also performed on lung cancer cell lines. SK-LU-1 is an adenocarcinoma cell line of the lung and A549 is a long lung carcinoma cell line. These cell lines were treated with the different sesquiterpene lactones and the average of the three treatments efficacy are shown in FIGS. 26A-B. The IC.sub.50 is calculated in micromolar.

[0174] Pancreatic Cancer Cell line: One Pancreatic cell line (ascites metastasis) AsPC-1 was treated with different SLs in a micromolar concentration. The resulted IC.sub.50 as shown in FIG. 27.

[0175] FIG. 28A-D displays results IC.sub.50 experiments on prostate cancer cell line for different purified sub fractions (1=Parthenin, 3=Ambrosin, 4=Damsin, 5=Neoambrosin) of the organic extraction wherein the IC.sub.50 is 4.878 (FIG. 28A), 2.715 (FIG. 28B), 1.160 (FIG. 28C) and 264.5 (FIG. 28D). The concentration is in mol. As expected, some of the sub fractions affected the cell line to a much greater extent to others.

Bromouridine Sequencing Experiment

[0176] The steady-state level of a particular RNA in a cell is a balance between its rates of production and degradation. Knowing the relative contribution of RNA synthesis and degradation to the steady-state level of particular transcripts is critical in order to better understand the mechanisms of regulation of these transcripts. Thus, when the cell homeostasis is changed by environmental stimuli or stress, the steady-state levels of some RNA will be altered. This change can then be used to determining whether the ensuing gene expression was the result of the altered RNA synthesis, stability or both.

[0177] As such, the RNA of cancer cells can be sequenced and compared to normal cells to see where there is more or less (i.e. altered) RNA. That can help lead to the gene or protein that might be triggering the cancer.

[0178] A common method of monitoring RNA changes is by labeling new RNA with Bromouridine, then isolate the RNA to see where the new RNA was made. Bromouridine sequencing is well known in the art.

[0179] We used this method to monitor RNA in the UM-UC-9 (bladder) and BT-20 (breast) cancer cell line to detect the level of nascent transcription on the genome after treatment with SLs. Both cell lines were treated with the whole organic fraction at one time, or purified Ambrosin from the organic fraction at different doses for 3.5 hours. The RNA was then labeled with Bromouridine for half an hour and sequenced to detect the level of nascent transcription in the genome.

[0180] The hallmark targets that were affected in their transcription upon treatment were then reviewed. Some of the hallmarks are directly related to cancer progression and proliferation that the treatment whether with the organic fraction or the purified Ambrosin caused the genes to be deregulated by transcribing them at lower level than the control.

[0181] Upon treatment with the organic fraction or with the purified Ambrosin at different doses, genes that affected the apoptotic pathway, reactive oxygen species pathway, among others vital to cancer progression, were upregulated. Thus, the SLs and Ambrosin are able to reduce, if not stop, some of these pathways and slow or reduce the cancer progression.

[0182] The present invention is exemplified with respect to the examples and description using extracts from the martima and hispida plants. However, this is exemplary only, and the invention can be broadly applied to any Ambrosia plant. Further, any SLs found in these plants are expected to show some level of cytotoxicity for cancer treatment. The foregoing examples are intended to be illustrative only, and not unduly limit the scope of the appended claims.

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