SAMPLE SEPARATING METHOD

Abstract

A method for separating motile organisms from other organisms. The method comprises controlling a fluid delivery unit to provide a fluid flow to a sample separating device (302). The fluid flow has a sample introduction flow velocity set so that a sample may be introduced into a sample introduction zone of the device. The sample introduction flow velocity is sufficiently high such that an organism in the sample is unable to exit the sample introduction zone. The method comprises controlling the fluid delivery unit to reduce the fluid flow velocity from the sample introduction flow velocity to an operational flow velocity lower than the sample introduction flow velocity (303). The operational flow velocity is selected such that motile organisms in the sample are able to swim against the fluid flow and enter a sample collection zone of the device.

Claims

1. A sample separating method for separating motile organisms from other organisms, the method comprising: controlling a fluid delivery unit to provide a fluid flow to a sample separating device comprising a fluid inlet and a fluid terminus, wherein the fluid flow is provided between the fluid inlet and the fluid terminus of the sample separating device, wherein the fluid flow has a sample introduction flow velocity set so that a sample may be introduced into a sample introduction zone of the sample separating device, and wherein the sample introduction flow velocity is sufficiently high such that an organism in the sample is unable to exit the sample introduction zone; and controlling the fluid delivery unit to set the fluid flow velocity from the sample introduction flow velocity to an operational flow velocity lower than the sample introduction flow velocity by reducing the fluid flow velocity from the sample introduction flow velocity to the operational flow velocity over a predetermined period of time, wherein the operational flow velocity is selected such that motile organisms in the sample are able to swim against the fluid flow and enter a sample collection zone of the sample separating device.

2. (canceled)

3. A method as claimed in claim 1, wherein the predetermined period of time is greater than or equal to 30 seconds, greater than or equal to 1 minute, between 1 minute and 60 minutes, between 1 minute and 20 minutes, or between 1 minute and 10 minutes.

4. A method as claimed in claim 1, wherein the sample introduction flow velocity is greater than or equal to 100 micrometres per second, between 100 micrometres per second to 1000 micrometres per second, between 200 micrometres per second to 800 micrometres per second, or 550 micrometres per second.

5. A method as claimed in claim 1, wherein the operational flow velocity is greater than or equal to 20 micrometres per second, between 20 micrometres per second to 150 micrometres per second, between 30 micrometres per second to 80 micrometres per second, or 55 micrometres per second.

6. A method as claimed in claim 1, wherein controlling the fluid delivery unit to set the fluid flow velocity from the sample introduction flow velocity to the operational flow velocity comprises maintaining the fluid flow substantially at the operational flow velocity over another predetermined period of time.

7. A method as claimed in claim 1, further comprising controlling the fluid delivery unit to increase the fluid flow velocity from the operational flow velocity to a sample collection flow velocity higher than the operational flow velocity such that the motile organisms are able to be collected from the sample collection zone.

8. A method as claimed in claim 1, wherein prior to controlling the fluid delivery unit to provide the fluid flow having the sample introduction flow velocity, the method comprises controlling the fluid flow to have a device priming flow velocity, wherein the device priming flow velocity is higher than the sample introduction flow velocity.

9. A method as claimed in claim 1, wherein the motile organisms are organisms that exhibit a form of taxis, or wherein the motile organisms are sperm.

10. A computer readable medium having instructions recorded thereon which, when executed by a computer, cause the computer to implement operations including: controlling a fluid delivery unit to provide a fluid flow to a sample separating device comprising a fluid inlet and a fluid terminus, wherein the fluid flow is provided between the fluid inlet and the fluid terminus of the sample separating device, wherein the fluid flow has a sample introduction flow velocity set so that a sample may be introduced into a sample introduction zone of the sample separating device, and wherein the sample introduction flow velocity is sufficiently high such that an organism in the sample is unable to exit the sample introduction zone; and controlling the fluid delivery unit to set the fluid flow velocity from the sample introduction flow velocity to an operational flow velocity lower than the sample introduction flow velocity by reducing the fluid flow velocity from the sample introduction flow velocity to the operational flow velocity over a predetermined period of time, wherein the operational flow velocity is selected such that motile organisms in the sample are able to swim against the fluid flow and enter a sample collection zone of the sample separating device.

11. A sample separating apparatus arranged to provide a fluid flow to a sample separating device for separating motile organisms from other organisms, the sample separating device comprises a fluid inlet, a fluid terminus, a sample introduction zone and a sample collection zone, the apparatus comprises a fluid delivery unit; and a controller operable to control the fluid delivery unit to: provide the fluid flow to the sample separating device, wherein the fluid flow is provided between the fluid inlet and the fluid terminus of the sample separating device, wherein the fluid flow has a sample introduction flow velocity set so that a sample may be introduced into the sample introduction zone of the sample separating device, and wherein the sample introduction flow velocity is sufficiently high such that an organism in the sample is unable to exit the sample introduction zone; and set the fluid flow velocity from the sample introduction flow velocity to an operational flow velocity lower than the sample introduction flow velocity by reducing the fluid flow velocity from the sample introduction flow velocity to the operational flow velocity over a predetermined period of time, wherein the operational flow velocity is selected such that motile organisms in the sample are able to swim against the fluid flow and enter a sample collection zone of the device perform the method as claimed in claim 1.

12. A sample separating apparatus as claimed in claim 11 comprising one or more channels, each channel being defined by a pair of channel walls between the sample introduction zone and the sample collection zone.

13. A sample separating apparatus as claimed in claim 12 comprising a plurality of channels, optionally wherein each channel extends radially outward from a central sample collection zone to the sample introduction zone, optionally wherein the sample introduction zone extends around the collection zone.

14. A sample separating apparatus as claimed in claim 12 wherein the sample introduction flow velocity is set so that fluidic jets prevent an organism in the sample from entering the channel.

15. A sample separating apparatus as claimed in claim 12 wherein one or both of the operational flow velocity and channel dimensions is set so that vortices are induced proximal to an opening of the channel, the vortices aiding transportation of the organisms towards the channel opening.

16. A method as claimed in claim 6, wherein the another predetermined period of time is greater than or equal to 1 minute, between 1 minute and 120 minutes, between 10 minutes to 45 minutes, or 30 minutes.

17. A method as claimed in claim 7, wherein the sample collection flow velocity is greater than or equal to 150 micrometres per second, between 150 micrometres per second and 15000 micrometres per second, 250 micrometres per second, between 400 micrometres per second and 11000 micrometres per second, or 11000 micrometres per second.

18. A method as claimed in claim 8, wherein the device priming flow velocity is greater than or equal to 800 micrometres per second, between 800 and 2000 micrometres per second, between 1500 and 1600 micrometres per second, or 1100 micrometres per second.

Description

[0133] For a better understanding of the invention, and to show how embodiments of the same may be carried into effect, reference will now be made, by way of example only, to the accompanying diagrammatic drawings in which:

[0134] FIG. 1 is a schematic diagram of a sample separating device according to an existing implementation;

[0135] FIG. 2 is a process flow diagram of an example sample separating method according to aspects of the present invention;

[0136] FIG. 3 is another process flow diagram of an example sample separating method according to aspects of the present invention;

[0137] FIG. 4(a) is a plot showing the change in fluid flow velocity against time according to an example sample separating method according to aspects of the present invention;

[0138] FIG. 4(b) is a graph showing the number of unsorted sperm in the sample collection zone against period of time for reduction from the sample introduction flow velocity to the operational flow velocity;

[0139] FIGS. 5(a)-5(c) are schematic diagrams of an example sample separating device according to aspects of the present invention;

[0140] FIG. 6 is a schematic diagram of another example sample separating device according to aspects of the present invention;

[0141] FIG. 7 is a schematic diagram of another example sample separating device according to aspects of the present invention;

[0142] FIGS. 8(a) to 8(b) are schematic diagrams of yet another example sample separating device according to aspects of the present invention;

[0143] FIG. 8(c) is a schematic diagram of another example sample separating device according to aspects of the present invention;

[0144] FIG. 9 is a schematic diagram of another example sample separating device according to aspects of the present invention;

[0145] FIG. 10 is a simplified block diagram of an example sample separating apparatus according to aspects of the present invention; and

[0146] FIGS. 11(a)-11(b) are perspective views of another example sample separating apparatus according to aspects of the present invention.

[0147] Referring to FIG. 2, there is shown an example process flow diagram for a method according to an example implementation of the present invention. The method is a sample separating method for separating motile organisms from other organisms.

[0148] Step 201 of the method comprises providing a fluid flow having a sample introduction flow velocity. In particular, the method comprises controlling a fluid delivery unit to provide a fluid flow to a sample separating device comprising a fluid inlet and a fluid terminus. The fluid flow is provided between the fluid inlet and the fluid terminus of the device and may be referred to as the primary fluid path. In other words, the device provides a channel between the fluid inlet and the fluid terminus of the device. The fluid delivery unit is controlled to delivery fluid to the fluid inlet such that it may flow through the channel to the fluid terminus.

[0149] The sample introduction flow velocity is set so that a sample may be introduced into a sample introduction zone of the device. The sample may be introduced into the sample introduction zone by, for example, pipetting the sample into the sample introduction zone. The sample may be introduced by a sample introduction unit of a sample separating apparatus that the device is positioned within.

[0150] Importantly, the sample introduction flow velocity is set to be sufficiently high such that an organism in the sample is unable to exit the sample introduction zone. By this, it is meant that the flow velocity of the fluid flow is sufficiently high that the fluid flow between the fluid inlet and fluid terminus presents a barrier that prevents organisms within the sample introduction zone from leaving the sample introduction zone and entering the fluid flow. This, for example, prevents organisms for being wicked up the conduit towards a sample collection zone of the device by capillary action.

[0151] Step 202 of the method comprises reducing the fluid flow velocity to an operational flow velocity lower than the sample introduction velocity. In particular, the method comprises controlling the fluid delivery unit to reduce the fluid flow velocity from the sample introduction flow velocity to an operational flow velocity lower than the sample introduction flow velocity. The operational flow velocity is selected such that motile organisms in the sample are able to swim against the fluid flow and enter a sample collection zone of the device.

[0152] Referring to FIG. 3, there is shown another example process flow diagram for a method according to an example implementation of the present invention. The method is a sample separating method for separating motile organisms from other organisms.

[0153] Step 301 of the method comprises providing a fluid flow having a device priming flow velocity.

[0154] Step 302 of the method comprises providing a fluid flow having a sample introduction flow velocity. In other words, the flow velocity is reduced from the device priming flow velocity to the sample introduction flow velocity. The sample introduction flow velocity is lower than the device priming flow velocity.

[0155] Step 303 of the method comprises reducing the fluid flow velocity to an operational flow velocity lower than the sample introduction flow velocity. The fluid flow velocity is maintained at the operational flow velocity for a period of time sufficient to allow a desired quantity of motile organisms to swim against the fluid flow and enter the sample collection zone.

[0156] Step 304 of the method comprises increasing the fluid flow velocity to a sample collection flow velocity higher than the sample introduction flow velocity. This means that once a sufficient concentration of motile organisms are in the sample collection zone, the flow velocity may be increased to a sample collection flow velocity. When the flow velocity is at the sample collection flow velocity, the sample may be removed from the sample collection zone. In particular, a sample collection unit of the sample separating apparatus may be controlled to remove the sample from the sample collection zone. The sample collection flow velocity may be set to be sufficiently high to prevent organisms within the sample introduction zone from being drawn to the sample collection zone as the sample is being removed from the sample collection zone.

[0157] In an exemplary embodiment of a method in accordance with the present invention, the method further comprises a bubble removal step. In an exemplary embodiment, the bubble removal step forms part of, or is comprised in, the device priming step. That is, device priming step 301 comprises bubble removal. The bubble removal step precedes the introduction of the sample. In this way, bubbles may be removed from the fluid before sample introduction. Bubble removal may be facilitated by providing a fluid flow at a bubble removal flow velocity. Bubble location is a function of device architecture, degassing, air ingress, material and fluid and air interactions (including surface tensions).

[0158] Referring to FIG. 4(a), there is shown an example plot of the flow velocity against time according to an example implementation of the method described above in relation to FIG. 3. The y-axis of the plot represents the velocity and uses a logarithmic scale. The x-axis of the plot represents the time and uses a linear scale.

[0159] FIG. 4(a) shows that the process starts by providing fluid flow at the device priming flow velocity 401. The device priming flow velocity is 1.6 millimetres per second in this example. The fluid delivery unit may generate fluid flow at the device priming flow velocity for a short period of time. The short period of time may even be between 1 second and 2 seconds.

[0160] The device priming flow velocity 401 is then reduced to the sample introduction flow velocity 402. The reduction of the flow velocity from the device priming flow velocity 401 to the sample introduction flow velocity 402 may happen over a short period of time, and may appear to occur instantaneously as shown in FIG. 4(a). The fluid flow velocity may be set at the sample introduction flow velocity 402 for around 1 minute

[0161] The sample introduction flow velocity 402 is then reduced to the operational flow velocity 403. The reduction of the flow velocity from the sample introduction flow velocity 402 to the operational flow velocity 403 happens gradually, and in the example of FIG. 4(a) takes approximately 10 minutes. The fluid delivery unit then maintains the operational flow velocity 403 for a relatively long period of time. This period of time may be the time taken for sufficient motile organisms to arrive at the sample collection zone of the device. This may be confirmed by visual inspection of the sample collection zone. Generally, the fluid delivery unit will maintain the operational flow velocity 403 for between 20 minutes and 40 minutes. In the particular example shown in FIG. 4(a), the operational flow velocity 403 is maintained for 20 minutes.

[0162] The operational flow velocity 403 is then increased to the sample collection flow velocity 404. The sample collection flow velocity 404 in this example is 555 micrometres per second. The flow velocity is maintained at the sample collection flow velocity 404 for 5 minutes. Once the sample collection flow velocity 404 is established, the sample and other fluid in the sample introduction zone may be collected and discarded. Further, the sample within the sample collection zone may be collected.

[0163] Referring to FIG. 4(b), the effect of reducing the sample introduction flow velocity 402 to the operational flow velocity 403 over a predetermined period of time is quantified with reference to the following non-limiting examples provided below. Whilst the examples provided relate to a reduction from a sample introduction flow velocity 402 of 1400 micrometres per second to an operational flow velocity 403 of 55 micrometres per second over 0, 10, 20 and 30 seconds, the person skilled in the art will appreciate that similar advantages are obtainable using different time periods or flow velocities.

[0164] The y-axis indicates the number of unsorted sperm which reached the sample collection zone. The x-axis indicates the period of time taken for the reduction of the flow velocity from the sample introduction flow velocity 402 to the operational flow velocity 403.

[0165] As shown in the “0 second” column, reducing the sample introduction flow velocity 402 to the operational flow velocity 403 instantaneously (i.e. abruptly, suddenly, or without a gradual reduction over a period of time) results in a large number of unsorted sperm reaching the sample collection zone. This is highly undesirable.

[0166] As shown in the “10 second” column, reducing the sample introduction flow velocity 402 to the operational flow velocity 403 over a period of 10 seconds (i.e. a gradual reduction, over a pre-determined period of time, in a non-abrupt manner) dramatically reduces the number of unsorted sperm which are able to reach the sample collection zone. This is highly desirable and advantageous.

[0167] As shown in the “20 second” column, reducing the sample introduction flow velocity 402 to the operational flow velocity 403 over a period of at least 20 seconds (i.e. a gradual reduction, over a pre-determined period of time, in a non-abrupt manner) results in a further dramatic reduction of unsorted sperm which are able to reach the sample collection zone over both the “0 second” and the “10 second” time periods.

[0168] As shown in the “30 second” column, reducing the sample introduction flow velocity 402 to the operational flow velocity 403 over a period of 30 seconds (i.e. a gradual reduction, over a pre-determined period of time, in a non-abrupt manner) results in no unsorted sperm being able to reach the sample collection zone. This is highly desirable and provides for optimal sperm sorting (i.e. where dead sperm, and deformed or otherwise non-motile sperm are unable to reach or be found in the collected sample in the sample collection zone).

[0169] So, from the above it can be understood that when the flow velocity is reduced in an abrupt or instantaneous manner, unsorted sperm inadvertently reach the sample collection zone. Reducing the flow velocity over a predetermined period of time reduces the number of unsorted sperm present in the collected sample. Indeed, increasing the period of time over which the flow velocity is reduced can prevent some or all (in this case, by reducing over 30 seconds) unsorted sperm reaching the sample collection zone. This is highly advantageous in optimising the quality of the collected sample.

[0170] Referring to FIGS. 5(a) to 5(c), there is shown a sample separating device 500 for separating motile organisms from other organisms. The sample separating device 500 is in the form of a microfluidic chip 500.

[0171] The device 500 comprises a fluid inlet 501. The fluid inlet 501 denotes a point where fluid may enter the device from a fluid delivery unit such as a pump in cooperation with a fluid store. The device 500 also comprises a fluid terminus 503 in fluid communication with the fluid inlet 501. The fluid terminus 503 in this example is in the form of a fluid collection well 503. A microfluidic channel 505 extends between the fluid inlet 501 and the fluid terminus 503. Fluid flowing from the fluid inlet 501 to the fluid terminus 503 forms a primary fluid path 505 for the device 500.

[0172] The device 500 comprises a sample introduction zone 507. The sample introduction zone 507 denotes a region of the device 500 where a sample may be introduced.

[0173] This is typically performed by pipetting the sample into the sample introduction zone 507. The sample introduction zone 507 is provided within the primary fluid path 505 at a location between the fluid inlet 501 and the fluid terminus 503, and in particular is proximate to the fluid terminus 503.

[0174] The device 500 comprises a sample collection zone 509. The sample collection zone 509 denotes a region of the device 500 where motile organisms may be collected. The sample collection zone 509 is located upstream of the sample introduction zone 507. In the example of FIG. 5(a), two sample collection zones 509a, 509b are provided at the terminal ends of microchannels 511a, 511b that have branched off of the primary flow path 505. The microchannels 511a, 511b form secondary fluid paths 511a, 511b.

[0175] In more detail, it can be seen that the primary fluid path 505 is defined by opposed side walls 513a, 513b. At the branching point 515, the two side walls 513a, 513b branch off to form side walls of the microchannels 511a, 511b. In this way, there is a continuous wall surface extending between the sample introduction zone 507 and each of the sample collection zones 509a, 509b.

[0176] FIG. 5(a) shows the device 500 during step 301 of the method described above in relation to FIG. 3. In particular, a fluid flow is provided between the fluid inlet and the fluid terminus having the device priming flow velocity. At this stage, no sample has been introduced into the sample introduction zone 507.

[0177] FIG. 5(b) shows the device 500 during step 302 of the method described above in relation to FIG. 3. In particular, the fluid flow velocity has been reduced to the sample introduction flow velocity. In addition, a sample has been pipetted into the sample introduction zone 507.

[0178] FIG. 5(c) shows the device 500 during step 303 of the method described above in relation to FIG. 3. In particular, the fluid flow velocity has been reduced to the operational flow velocity. Motile organisms are able to swim against the fluid flow, escape the sample introduction zone 507 and enter the sample collection zone 509.

[0179] Referring to FIG. 6, there is shown another example sample separating device 600 according to the first aspect of the present invention.

[0180] The sample separating device 600 comprises a fluid inlet 601. A connector in the form of a push connector 613 is provided upstream of the fluid inlet 601. The push connector 613 comprises a channel 615 which is in fluid communication with the fluid inlet 601. The push connector 613 enables the sample separating device 600 to be connected to a fluid delivery unit.

[0181] The sample separating device 600 further comprises a fluid terminus 603 in the form of a fluid outlet 603. Fluid is able to flow out of the sample separating device 600 via the fluid outlet 603. A sample introduction zone 607 is provided in the vicinity of the fluid outlet 603. A primary fluid path 605 extends between the fluid inlet 601, sample introduction zone 607 and fluid outlet 603.

[0182] The sample separating device 600 further comprises two sample collection zone 609a, 609b located upstream of the sample introduction zone 607. The two sample collection zones 609a, 609b are provided at the terminal ends of microchannels 611a, 611b that have branched off of the primary flow path 605. The microchannels 611a, 611b form secondary fluid paths 611a, 611b.

[0183] Referring to FIG. 7, there is shown another example of primary and second flow paths 705, 711a, 711b in a sample separating device 700 according to aspects of the present invention. The primary flow path extends between a fluid inlet (not shown) and a sample introduction zone/fluid terminus 707, 703. Two secondary fluid paths 711a, 711b branch off from the primary flow path 705 and terminate in sample collection zones 709a, 709b. The secondary fluid paths 711a, 711b in this example are curved at an angle to ensure that a non-zero wall shear stress is experienced along the secondary fluid path. In this particular example, the curved secondary fluid paths 711a represent arcs of a circle having a radius of 1 mm.

[0184] Further, the example of FIG. 7 shows that the sample introduction zone 707 and the sample collection zones 709a, 709b all have a radius of 1.4 mm. The length of the primary fluid path between the sample introduction zone and the sample collection zones 709a, 709b is 10 mm. The width of the primary fluid path is 0.75 mm.

[0185] Referring to FIGS. 8(a) and (b), there is shown another sample separating device 800 in accordance with the first aspect of the present invention. The device 800 is in the form of a microfluidic chip 800.

[0186] FIG. 8(a) shows a front surface of the device 800. FIG. 8(a) shows a fluid inlet 801 where a fluid may be introduced by a fluid delivery unit.

[0187] FIG. 8(b) shows a rear surface of the device 800. FIG. 8(b) shows that fluid entering the fluid inlet 801 from the front surface 800 of the device flows to the rear surface of the device 800 and enters the channel 805. The channel 805 forms a substantial part of a circle. Within the channel are twelve fluid ports 807a-807l that provide a fluid path between the rear surface of the device 800 and the front surface of the device 800. Fluid flowing through the channel 805 enters the fluid ports 807a-807l and passes to the front surface of the device 800.

[0188] FIG. 8(a) shows that on the front surface of the device 800, each of the fluid ports 807a-807l is in fluid communication with a microfluidic channel 809a-809l that extends towards the centre of the device 800. A fluid terminus 811 is located at the centre of the device. Thus, it can be seen that fluid flows from the fluid inlet 801 to the fluid terminus 811 via the channel 805, fluid ports 807a-807l, and microchannels 809a-809l. The microchannels 809a-809l can be considered as providing a plurality of primary fluid paths between the fluid inlet 801 and the fluid terminus 811.

[0189] FIG. 8(a) further shows that a plurality of sample introduction zones 813a-813l located at the terminal ends of the corresponding microchannels 809a-809l. The sample introduction zones 813a-813l are regions where the sample is introduced into the primary fluid path, such as by pipetting sample into each of the sample introduction zones 813a-813l. Motile organisms in the sample are able to swim against the fluid flow, swim up the microchannels 809a-809l and follow the branching secondary fluid paths 815a,817a-815l, 817l to a sample collection zone 819. In the sample of FIG. 8, a common sample collection zone 819 is provided that is shared with all of the sample introduction zones 813a-813l. That is, each of the sample introduction zones 813a-813l is in fluid communication with the same sample collection zone 819. The sample collection zone 819 is shown in the form of a circular channel 819.

[0190] FIG. 8(a) further shows a sample extraction point 821 that is in fluid communication with the sample collection zone 819 via channel 823. A pipette may be positioned in the sample extraction point 821 and may be activated to suck up the motile organisms within the sample collection zone 819. The device 800 of FIG. 8 may further comprise a cut-off valve (not shown) which may be deployed to cut-off the fluid communication between the sample introduction zones 813a-813l and the sample collection zone 819. The cut-off valve may be beneficial in preventing organisms remaining in the sample introduction zone from being sucked up into a pipette deployed in the sample extraction point 821.

[0191] In an example operation of the device of FIGS. 8(a) and (b), a fluid source such as a syringe may be connected to the fluid inlet 801. The syringe may be activated by a fluid delivery unit such as a syringe pump. Initially, fluid may be delivered into the fluid inlet 801 at a high, device priming flow velocity. The fluid will flow from the fluid inlet 801 into and around the channel 805 on the underside/rear surface of the device 800. As the fluid flows around the channel 805, the fluid will enter the fluid ports 807a-807l, return to the front surface of the device 800 and flow through the microchannels 809a-809l to the fluid terminus 811.

[0192] Once the device 800 is primed, the flow velocity of the fluid flow is reduced to the sample introduction flow velocity. Samples are then introduced into the sample introduction zones 813a-813l by one or more pipettes. The sample introduction flow velocity prevents the sample entering the microchannels 809a-809l/sample collection zone 819 by mechanisms such as capillary action or due to the pipetting force.

[0193] The flow velocity is then reduced again to the operational flow velocity, and motile organisms in the samples are able to swim against the fluid flow, swim up the microchannels 809a-809l and follow the branching secondary fluid paths 815a,817a-815l, 817l2 to a sample collection zone 819.

[0194] The flow velocity is then increased to a sample collection flow velocity. A pipette is positioned in the sample extraction point 821 and sucks up the motile organisms within the sample collection zone 819. In other words, motile organisms positioned around the sample collection zone 819 are sucked into the sample extraction point 821 by pipetting action. The sample collection flow velocity may be sufficiently high to prevent other organisms remaining in the sample introduction zone 813a-813l from being sucked into the sample collection zone 819 by the pipette. As a further precautionary measure, the cut-off valve (not shown) may be deployed to cut-off the fluid communication between the sample introduction zones 813a-813l and the sample collection zone 819.

[0195] Referring to FIG. 8(c), there is shown another example sample separating device 850 in accordance with the first aspect of the present invention. The device 850 is in the form of a microfluidic chip 850.

[0196] FIG. 8(c) shows a front surface of the device 850. FIG. 8(c) shows fluid inlet 854 where a fluid may be introduced by a fluid delivery unit. The device 850 also comprises a plurality of fluid termini 856 provided in an outlet reservoir 858. As shown in the Figure, the fluid termini 856 are in fluid communication with the fluid inlet 854. A plurality of microfluidic channels 860 extend radially outwardly from a central sample collection zone 862, in the form of arc. Each channel 860 is defined by a pair of channel walls. By providing a plurality of microfluidic channels 860, a greater quantity of sample may be obtaining by the separating method.

[0197] The device 850 comprises a sample introduction zone 864 in the form of sample inlet 866 and loading channel 868. The loading channel 868 is an arc surrounding the outlet reservoir 858. The sample introduction zone 864 denotes a region of the device 850 where a sample may be introduced. This is typically performed by pipetting the sample into the sample inlet 866 and allowing it to disperse through the loading channel 868. The sample introduction zone 864 thus allows for uniform distribution of the sample about the microfluidic channels 860. Therefore, there is an increased probability of collecting a high-quality sample by the separating method, as the motile organisms are able to be distributed throughout the loading channel 868 where they can enter the outlet reservoir 858 via a plurality of diffusion channels 870 to access nearby microfluidic channels 860.

[0198] The sample collection zone 862 denotes a region of the device 850 where motile organisms may be collected. The sample collection zone 862 is located upstream of the sample introduction zone 864. That is, in use, fluid flows from the sample collection zone 862 to the sample introduction zone 864 downstream, such that motile organisms swim from the sample introduction zone 864 to the sample collection zone 862 upstream. In the example of FIG. 8(c), the sample collection zone 862 is provided at the terminal ends of the microchannels 860.

[0199] In an example operation of the device of FIG. 8(c), a fluid source such as a syringe may be connected to the fluid inlet 854. The syringe may be activated by a fluid delivery unit such as a syringe pump. Initially, during a priming phase, fluid may be delivered into the fluid inlet 854 at a high, device priming flow velocity. The fluid will flow from the fluid inlets 854 into and through the microfluidic channels 860. The fluid exiting the microfluidic channels will then flow to the fluid termini 856.

[0200] Notably, fluid flowing from fluid inlet 854 travels into and through a plurality of radially extending flow distribution channels 872. Each flow distribution channel 872 is arcuate, and together the flow distribution channels 872 have a spiral-like form extending outwardly from the fluid inlet 854. Turbulent flow is induced as fluid flows out of the flow distribution channels 872 into the sample collection zone 862. The arcuate shape of the channels 872 can help to facilitate the creation of turbulent flow. In this way, motile organisms that have collected in the sample collection zone 862 are prevented from entering the flow distribution channels 872.

[0201] Notably, the fluid flow is uniformly distributed between microfluidic channels 860, such that a substantially identical flow rate is present in each microfluidic channel 860.

[0202] Furthermore, during priming, fluidic jets are induced in the outlet reservoir at the ends of the microfluidic channels 860 by the high device priming flow velocity. The motile organisms swim toward the jets but are prevented from entering the microfluidic channels 860 by the high flow velocity.

[0203] Of course, the flow velocity profiles may be as described above.

[0204] Once the device 850 is primed, the flow velocity of the fluid flow is reduced to the sample introduction flow velocity. A sample is then introduced into the sample introduction zone 864. The sample introduction flow velocity prevents the sample entering the microchannels 860 or sample collection zone 862 by mechanisms such as capillary action or due to the pipetting force.

[0205] Again, fluidic jets prevent the motile organisms from entering the microchannels 860.

[0206] The flow velocity is then reduced again to the operational flow velocity, and motile organisms in the samples are able to swim against the fluid flow, swim up the microchannels 860 to the sample collection zone 862.

[0207] Significantly, when the flow rate is reduced to the operational flow velocity, the fluidic jets cease to force the motile organisms away from the microfluidic channels 860, and instead, perhaps in combination with dimensions of the channels or channel openings, induce 3-D counter rotating vortices in the outlet reservoir 858 proximal to the opening of the microfluidic channels 860. These vortices aid transportation of the motile organisms from the sample towards the openings of the microfluidic channels 860. Thus, these vortices encourage motile organisms to the openings of the microfluidic channels 860, These vortices might alternatively or additionally be described as the introduction and maintenance of turbulence proximal to the opening of the microfluidic channels 860.

[0208] The flow velocity in the sample collection zone 862 is at a level that motile organisms that enter the sample collection zone 862 remain therein and are not forced back down microchannels 860. Again, as mentioned above, turbulent flows induced in the sample collection zone 862 by fluid flowing from flow distribution channels 872 prevents motile organisms from entering the flow distribution channels 872.

[0209] The flow velocity is then increased to a sample collection flow velocity. A sample collection step is then performed. Sample collection can be achieved by use of pipetting action to collect the motile organisms that were able to swim against the fluid flow up the microchannels 860, by pipetting the motile organisms from the sample collection zone 862. The sample collection flow velocity may be sufficiently high to prevent other organisms remaining in the sample introduction zone 864, or motile organisms that were unable to swim completely up the microchannels 860 to the sample collection zone 862, from being sucked into the sample collection zone 862 by the pipette.

[0210] Sample collection can alternatively be achieved by performing a flush collection step. The flush collection step makes use of collection zone inlet 874 and collection zone outlet 876. The collection zone inlet 874 and collection zone outlet 876 are in fluid communication with the sample collection zone 862. Fluid may be flushed from the collection inlet 874 to the collection outlet 876, thus removing from the sample collection zone 862 the motile organisms that were able to swim up the microfluidic channels 860 to the sample collection zone 862.

[0211] Referring to FIG. 9, there is shown another example sample separating device 900 in accordance with the first aspect of the present invention. The device 900 comprises a fluid inlet 901. The fluid inlet 901 denotes a point where fluid may enter the device from a fluid delivery unit such as a pump in cooperation with a fluid store. The device 900 also comprises fluid termini 903 in fluid communication with the fluid inlet 901. A plurality of microfluidic channels 905 extend radially outward from a central sample collection zone 909, wherein the fluid inlet 901 is also located. Each channel 905 is defined by a pair of channels walls. By providing a plurality of microfluidic channels 905, a greater quantity of sample may be obtained by the separating method.

[0212] The device 900 comprises a sample introduction zone 907 in the form of a ring surrounding the microfluidic channels 905. The sample introduction zone 907 denotes a region of the device 900 where a sample may be introduced. This is typically performed by pipetting the sample into the sample introduction zone 907, typically spread around the ring. The sample introduction zone thus allows for uniform distribution of the sample about the microfluidic channels 905. Therefore, there is an increased probability of collecting a high-quality sample by the separating method, as the motile organisms are able to be distributed throughout the ring where they can suitably access a nearby microfluidic channel 905.

[0213] A sample collection zone 909 denotes a region of the device 900 where motile organisms may be collected. The sample collection zone 909 is located upstream of the sample introduction zone 907. That is, in use, fluid flows from the sample collection zone to the sample introduction zone downstream, such that motile organisms swim from the sample introduction zone to the sample collection zone upstream. In the example of FIG. 9, the sample collection zone is provided at the terminal ends of microchannels 905.

[0214] In an example operation of the device of FIG. 9, a fluid source such as a syringe may be connected to the fluid inlet 901. The syringe may be activated by a fluid delivery unit such as a syringe pump. Initially, during a priming phase, fluid may be delivered into the fluid inlet 901 at a high, device priming flow velocity. The fluid will flow from the fluid inlet 901 into and through the microfluidic channels 905. The fluid exiting the microfluidic channels will then flow to the fluid termini 903.

[0215] Notably, the fluid flow is uniformly distributed between the channels, such that a substantially identical flow rate is present in each microfluidic channel 905. Furthermore, fluidic jets are caused at the end of the microfluid channels 905 by the high, device priming flow velocity. The motile organisms swim towards the jets but are prevented from entering the microfluidic channels 905. by the high flow velocity.

[0216] Of course, the flow velocity profiles may be as described above.

[0217] Once the device 900 is primed, the flow velocity of the fluid flow is reduced to the sample introduction flow velocity. A sample is then introduced into the sample introduction zone 907 by one or more pipettes. The sample introduction flow velocity prevents the sample entering the microchannels 905 or sample collection zone 909 by mechanisms such as capillary action or due to the pipetting force.

[0218] Again, fluidic jets prevent the motile organisms from entering the channels 905.

[0219] The flow velocity is then reduced again to the operational flow velocity, and motile organisms in the samples are able to swim against the fluid flow, swim up the microchannels 905 to the sample collection zone 909.

[0220] Significantly, when the flow rate is reduced to the operational flow velocity, the fluidic jets cease to force the motile organisms away from the microfluidic channels 905, and instead, perhaps in combination with dimensions of the channels or channel openings 905, induce 3-D counter-rotating vortices in the sample introduction zone 907 proximal to the opening of the microfluidic channels 905. These vortices aid in the transportation of the motile organisms from the sample towards the opening of the microfluidic channels 905. Thus, these turbulent vortices encourage motile organisms to the opening of the microfluidic channels 905.

[0221] These vortices might alternatively or additionally be described as the introduction and maintenance of turbulence proximal to the opening of the microfluidic channels 905.

[0222] The flow velocity in the sample collection zone 909 is at a level that motile organisms that enter the sample collection one 909 remain therein and are not forced back down microchannels 905.

[0223] The flow velocity is then increased to a sample collection flow velocity. Pipetting action is then used to collect the motile organisms that were able to swim against the fluid flow up the microchannels 905, by pipetting the motile organisms from the sample collection zone 909. The sample collection flow velocity may be sufficiently high to prevent other organisms remaining in the sample introduction zone 907, or motile organisms that were unable to swim completely up the microchannels 905 to the sample collection zone 909, from being sucked into the sample collection zone 909 by the pipette.

[0224] Referring to FIG. 10, there is shown an example sample separating apparatus 1000 according to aspects of the present invention. The sample separating apparatus 1000 is for separating motile organisms from other organisms.

[0225] The sample separating apparatus 1000 comprises a device reception unit 1001 arranged to receive a device. The device may be a sample separating device as described above in relation to FIGS. 5 to 9. The device comprises a fluid inlet, fluid terminus, sample introduction zone, and sample collection zone.

[0226] The sample separating apparatus 1000 comprises a fluid delivery unit 1003 in fluid communication with the device reception unit 1001. The fluid delivery unit 1003 is arranged to deliver a fluid to the fluid inlet of the device such that a fluid flow may be established between the fluid inlet and the fluid terminus of the device.

[0227] The fluid delivery unit may comprise a fluid source and a pump. The pump may operate by suction or by pressure. The pump may be a microfluidic pump. The pump may be a syringe pump.

[0228] The sample separating apparatus 1000 comprises a sample introduction unit 1005 arranged to introduce a sample to the sample introduction zone of the device such that motile organisms introduced into the sample introduction zone are able to swim against the fluid flow and enter the sample collection zone.

[0229] The sample separating apparatus 1000 further comprises a sample collection unit 1007 arranged to collect the sample from the sample collection zone of the device.

[0230] The sample separating apparatus 1000 further comprises a controller 1009. The controller 1009 is operable to control the fluid delivery unit 1001, the sample introduction unit 1005, and the sample collection unit 1007. The controller 1009 enables the sample separating apparatus 1000 to perform certain actions automatically and without a user input.

[0231] In operation, a sample separating device is positioned in the device reception unit 1001. Positioning the device in the device reception unit 1001 connects the fluid inlet of the device to the fluid delivery unit 1003 such that a fluid flow may be established between the fluid inlet and the fluid terminus of the device. The fluid delivery unit 1003 may be controlled by the controller 1009 to deliver fluid at different flow velocities such as those described above in relation to the first aspect of the invention. The controller 1009 controls the sample introduction unit 1005 to introduce a sample into the sample introduction zone. Once the sample separating operation has finished, the controller 1009 controls the sample collection unit 1007 to collect the sample from the sample collection zone. All or part of this operation may be performed automatically without user input.

[0232] Referring to FIGS. 11(a) and 11(b) there is shown a sample separating apparatus 1100 in accordance with the present invention. The sample separating apparatus 1100 comprises a housing 1101. The sample separating apparatus 1100 comprises a device reception unit 1103 in the form of a moveable tray 1103. The moveable tray 1103 comprises a recess 1105 for receiving a device, a recess 1107 for receiving a sample tube, and a recess 1109 for receiving a collection tube. The sample tube holds a sample for introduction to the sample introduction zone by the sample introduction unit of the apparatus 1100. The collection tube is for receiving a sample collected from the sample collection zone by the sample collection unit of the apparatus 1100. The moveable tray 1103 is shown in FIGS. 11(a) and 11(b) in an open configuration. In this configuration a device, sample tube, and collection tube may be positioned/removed from the moveable tray 1103. FIG. 11(b) shows a device 600 loaded into the recess 1105 in the moveable tray 1103. The moveable tray 1103 is able to be pushed into a closed configuration where the tray 1103 is enclosed within the housing 1101.

[0233] This has the effect of enclosing a device loaded into the tray 1103 into the housing 1101. This helps to protect the device from environmental disturbances during the sample separating operation.

[0234] After the tray 1103, the device is sealed from the external environment and thus is protected from local atmospheric pressure changes within the environment where the apparatus 1100 is located. A temperature control unit of the apparatus is further operable to heat the vicinity of the device to a predetermined temperature value and maintain this the temperature at this value. The predetermined temperature value may be body temperature (e.g. 37 degrees centigrade).

[0235] Once the temperature has stabilised, the method as described above in relation to the first aspect of the present invention may be performed. That is, the device is primed with fluid by the fluid delivery unit delivering fluid at the device priming flow velocity. The fluid delivery unit is controlled to reduce the fluid flow velocity to the sample introduction flow velocity, and the sample introduction unit operates to introduce a sample into the sample introduction zone of the device. The sample introduction flow velocity is then gradually reduced to an operational flow velocity, and the fluid flow is maintained at the operational flow velocity until sufficient motile organisms have swum against the fluid flow and entered the sample collection zone. The fluid delivery unit is then controlled to increase the fluid flow to the sample collection flow velocity, and the sample collection unit is activated to collect the sample from the sample collection zone.

[0236] In the example of FIGS. 11(a)-(b), the apparatus 1100 further comprises a display 1111. The display 1111 provides a user interface through which a user may interact to control the apparatus 1100. Here, control the apparatus 1100 may mean control the overall operation of the apparatus 1100. Individual steps or operations may be performed by the apparatus 1100 automatically without a specific user input. The apparatus 1100 may further comprise an imaging unit operable to image a device received in the device reception unit. The display 1111 is operable to display the imaged device. This is useful as it enables a user to visually inspect the device, and in particular, the sample collection zone so that a user can confirm whether a sufficient number of motile organisms have entered the sample collection zone.

[0237] Beneficially, the sample separating method, device, and apparatus of the present invention are able to separate motile organisms, such as motile sperm, from other organisms within an original sample. In experiments performed on frozen and fresh sperm samples, approaches in accordance with the present invention where would to provide samples in the sample collection zones of the device with a higher percentage concentration of motile sperm compared to existing approaches. Moreover, a greater percentage of the sperm within the sample collection zone were found to have a normal morphology than in existing approaches. Beneficially still, the sperm within the sample collection zone were found to have a lower DNA Fragmentation Index than in existing approaches.

[0238] In experiments performed on mice using ICSI, the cleavage rate (i.e. the fertilisation rate) was found to be higher for sperm separated according to approaches of the present invention than in existing approaches. Moreover, the Morula-Blastocyst Rate (an indication of the embryo development rate) was found to be higher for sperm separated according to approaches of the present invention than in existing approaches. The implantation rate and the foetus development rate were also found to be higher when sperm separated according to approaches of the present invention were used. In addition, the reabsorption rate for sperm separated according to approaches of the present invention were lower.

[0239] Individually, the sample separating method, the sample separating device, and the sample separating apparatus are able to provide benefits in terms of separating motile organisms from other organisms within a sample. Significantly still, synergistic benefits can be achieved through a combination of the sample separating method and the sample separating device, the sample separating method and the sample separating apparatus, the sample separating device and the sample separating apparatus, or the sample separating method, device, and apparatus.

[0240] Although a few preferred embodiments of the present invention have been shown and described, it will be appreciated by those skilled in the art that various changes and modifications might be made without departing from the scope of the invention, as defined in the appended claims.

[0241] At least some of the example embodiments described herein may be constructed, partially or wholly, using dedicated special-purpose hardware. Terms such as ‘component’, ‘module’ or ‘unit’ used herein may include, but are not limited to, a hardware device, such as circuitry in the form of discrete or integrated components, a Field Programmable Gate Array

[0242] (FPGA) or Application Specific Integrated Circuit (ASIC), which performs certain tasks or provides the associated functionality. In some embodiments, the described elements may be configured to reside on a tangible, persistent, addressable storage medium and may be configured to execute on one or more processors. These functional elements may in some embodiments include, by way of example, components, such as software components, object-oriented software components, class components and task components, processes, functions, attributes, procedures, subroutines, segments of program code, drivers, firmware, microcode, circuitry, data, databases, data structures, tables, arrays, and variables. Although the example embodiments have been described with reference to the components, modules and units discussed herein, such functional elements may be combined into fewer elements or separated into additional elements. Various combinations of optional features have been described herein, and it will be appreciated that described features may be combined in any suitable combination. In particular, the features of any one example embodiment may be combined with features of any other embodiment, as appropriate, except where such combinations are mutually exclusive. Throughout this specification, the term “comprising” or “comprises” means including the component(s) specified but not to the exclusion of the presence of others.

[0243] Attention is directed to all papers and documents which are filed concurrently with or previous to this specification in connection with this application and which are open to public inspection with this specification, and the contents of all such papers and documents are incorporated herein by reference.

[0244] All of the features disclosed in this specification (including any accompanying claims, abstract and drawings), and/or all of the steps of any method or process so disclosed, may be combined in any combination, except combinations where at least some of such features and/or steps are mutually exclusive.

[0245] Each feature disclosed in this specification (including any accompanying claims, abstract and drawings) may be replaced by alternative features serving the same, equivalent or similar purpose, unless expressly stated otherwise. Thus, unless expressly stated otherwise, each feature disclosed is one example only of a generic series of equivalent or similar features.

[0246] The invention is not restricted to the details of the foregoing embodiment(s). The invention extends to any novel one, or any novel combination, of the features disclosed in this specification (including any accompanying claims, abstract and drawings), or to any novel one, or any novel combination, of the steps of any method or process so disclosed.