FLUID HANDLING USING RECEPTACLE MARKING FOR NEEDLE POSITIONING
20230003752 · 2023-01-05
Inventors
Cpc classification
B01L2300/021
PERFORMING OPERATIONS; TRANSPORTING
G01N35/00732
PHYSICS
B01L3/50
PERFORMING OPERATIONS; TRANSPORTING
International classification
G01N35/00
PHYSICS
Abstract
A fluid handling unit is configured for handling a fluid contained or to be contained in a receptacle bearing a marking. The unit includes a needle having an elongated shape with an open end and for aspirating the fluid from the receptacle and/or dispensing the fluid into the receptacle. The fluid handling unit further includes a needle drive for positioning the needle with respect to the receptacle, a detection unit for detecting the marking of the receptacle, and a control unit. The control unit is configured for analyzing the detected marking for determining at least one feature that is part of the marking or the marking itself, determining a target position based on the detected at least one feature, and operating the needle drive to position the open end of the needle relative to the determined target position.
Claims
1. A fluid handling unit configured for handling a fluid contained or to be contained in a receptacle bearing a marking, wherein the receptacle has a body for containing the fluid and an opening for reaching into the receptacle, and the marking is positioned on the receptacle in a spatially defined relationship to the opening into the receptacle, the fluid handling unit comprising: a needle having an elongated shape with an open end and being configured for at least one of: aspirating the fluid from the receptacle; and dispensing the fluid into the receptacle; a needle drive configured for positioning the needle with respect to the receptacle; a detection unit configured for detecting the marking of the receptacle; a control unit configured for analyzing the detected marking for determining at least one feature being part of the marking or the marking itself, determining a target position based on the detected at least one feature, wherein the target position is selected to be in spatial relationship to the center point of the opening, and operating the needle drive to position the open end of the needle relative to the determined target position.
2. The fluid handling unit of claim 1, wherein the control unit is configured for correcting a deviation of an actual position from the determined target position of the open end of the needle, preferably by determining the deviation by using at least one of: an image recognition, an optical measurement, a capacitive measurement, and an inductive measurement, and preferably operating the needle drive to correct for the determined deviation.
3. The fluid handling unit of claim 1, wherein: the at least one feature has a defined spatial relationship to the opening and preferably to a center point of the opening.
4. The fluid handling unit of claim 1, wherein: the target position is selected to be the center point of the opening.
5. The fluid handling unit of claim 1, comprising at least one of: the receptacle comprises at least one of: a container; a vial; a vessel; a tube; and a microtiter plate; the receptacle comprises a plurality of individual wells each for receiving and storing a fluid; the needle drive comprises at least one of: a linear stage; an xyz-robot; a robot arm; and a manipulator; the needle drive is configured for immersing the needle into the receptacle.
6. The fluid handling unit of claim 1, comprising at least one of: the marking comprises at least one of: a fiducial; a fiducial mark; a barcode; a 2D barcode; an Aztec code; and a machine-readable label or marking; the marking is located on a surface of the receptacle; the marking is located on an upper surface of the receptacle; the marking is located on at least one of: a cap; a lid; a flap; a coverage; a foil; and a seal; the marking is located on a lower surface of the receptacle; the marking is located on a lateral surface of the receptacle; the marking is provided as at least one of: a label; a sticker; and a tag; the marking is applied by at least one of: printing; stamping; and laser marking the marking contains at least one material selected from the group consisting of: an ink; a dye; a fluorescent dye; a dielectric material; a metal; a magnetic material; a polymer; a polarizable material; a molten polymer printing; and a material of different color than the surface of the receptacle; the marking is part of the receptacle; the marking is part of at least one selected from the group consisting of: a cap; a lid; a flap; a coverage; a foil; and a seal; the marking comprises an RFID antenna; the marking is provided by an indentation into and/or elevation on the receptacle.
7. The fluid handling unit of claim 1, comprising at least one of: the detection unit comprises at least one of: an optical detection unit; a fluorescence detection unit; a phosphorescence detection unit; a magnetic detection unit; and a microwave detection unit; the detection unit is configured for detecting the marking by providing at least one of: an image recognition; fluorescence imaging; reading dielectric barcodes; and reading magnetic structures; the detection unit is configured for detecting the marking of the receptacle when the receptacle is located in a dedicated detection area of the fluid handling unit where the detection unit is capable of detecting the receptacle; the at least one feature to be determined by the control unit is at least one of: a point; a middle point; one or more edges of a geometric object; a geometrical shape; a circle; a square; a rectangle; and a triangle.
8. The fluid handling unit of claim 1, comprising at least one of: the control unit is configured for operating the needle drive to position the open end of the needle relative to the determined target position above the receptacle, and for moving the needle towards the marking in order to contact the determined target position with the open end of the needle; the control unit is configured for operating the needle drive to position the open end of the needle into the receptacle for aspirating and/or dispensing the fluid.
9. The fluid handling unit of claim 1, wherein the fluid handling unit is configured for handling a fluid in a chromatography system comprising a mobile phase drive and a separation unit, wherein the mobile phase drive is configured for driving a mobile phase through the separation unit, and the separation unit is configured for chromatographically separating compounds of a sample fluid in the mobile phase, wherein the fluid is contained or to be contained in a receptacle bearing a marking, and the fluid is at least one of: the sample fluid to be injected into the mobile phase and separated compounds of the sample fluid.
10. A chromatography system, comprising: a mobile phase drive; a separation unit, wherein the mobile phase drive is configured for driving a mobile phase through the separation unit, and the separation unit is configured for chromatographically separating compounds of a sample fluid in the mobile phase; and the fluid handling unit of claim 1, wherein the fluid handling unit is configured for handling a fluid contained or to be contained in a receptacle bearing a marking, and the fluid is at least one of: the sample fluid to be injected into the mobile phase; and separated compounds of the sample fluid.
11. The chromatography system of claim 10, wherein the receptacle comprises a marking configured to be for determining at least one feature being part of the marking or the marking itself for determining a target position based on the detected at least one marking, in order to operate a needle drive to position an open end of a needle relative to the determined target position.
12. A method for positioning a needle with respect to a receptacle for aspirating a fluid contained in the receptacle and/or dispensing a fluid into the receptacle, wherein the receptacle bears a marking, the receptacle has a body for containing the fluid and an opening for reaching into the receptacle, and the marking is positioned on the receptacle in a spatially defined relationship to the opening into the receptacle, the method comprising: detecting the marking of the receptacle; analysing the detected marking for determining at least one feature being part of the marking or the marking itself, determining a target position based on the detected at least one feature, wherein the target position is selected to be in spatial relationship to the center point of the opening, and positioning the needle relative to the determined target position.
13. The method according to claim 12, further comprising at least one of: correcting a deviation of an actual position from the determined target position of an open end of the needle; detecting the marking by providing at least one of: an image recognition; reading dielectric barcodes; and reading magnetic structures; detecting the marking of the receptacle when the receptacle is located in a dedicated detection area of the fluid handling unit where the detection unit is capable of detecting the receptacle.
14. The method of claim 12, further comprising at least one of: positioning an open end of the needle relative to the determined target position above the receptacle; moving the needle towards the marking in order to contact the determined target position with an open end of the needle; positioning an open end of the needle into the receptacle for aspirating and/or dispensing the fluid.
15. A non-transitory computer-readable medium with instructions stored thereon, that when executed by a processor, control the steps of the method of claim 12.
16. The method of claim 12, comprising correcting a deviation of an actual position from the determined target position of an open end of the needle, by determining the deviation by using at least one of: an image recognition; a capacitive measurement; and an inductive measurement.
Description
BRIEF DESCRIPTION OF DRAWINGS
[0063] Other objects and many of the attendant advantages of embodiments of the present invention will be readily appreciated and become better understood by reference to the following more detailed description of embodiments in connection with the accompanied drawings. Features that are substantially or functionally equal or similar will be referred to by the same reference signs.
[0064]
[0065]
[0066]
[0067]
[0068]
[0069]
[0070] Referring now in greater detail to the drawings,
[0071] In one embodiment, at least parts of the sample injector 40 and the fractionating unit 60 can be combined into a fluid handling unit 65, e.g. in the sense that some common hardware is used as applied by both of the sample injector 40 and the fractionating unit 60. The fluid handling unit 65 can provide functions of both, the sample injector 40 and the fractionating unit 60, e.g. handling sample fluid typically contained in a respective receptacle (container, vessel, vial, et cetera) for aspirating the sample fluid and injecting such aspirated sample fluid into the flow of the mobile phase from the mobile phase drive 20. This may include handling of plural receptacles each containing a respective sample fluid to be injected. Further or alternatively, the fluid handling unit 65 may also be configured to receive separated compounds of sample fluid dispensed by the fractionating unit 60, e.g. for dispensing into one or more receptacles. Such dispensed fluid (e.g. the separated compounds of sample fluid) may then be handled by the fluid handling unit 65 e.g. for re-injection into the mobile phase or for depositing the respective receptacle either internally or externally with respect to the liquid separation system 10. Parts of the fluid handling unit 65 will be depicted in greater detail in
[0072] The separating device 30 may comprise a stationary phase configured for separating compounds of the sample fluid. Alternatively, the separating device 30 may be based on a different separation principle (e.g. field flow fractionation).
[0073] While the mobile phase can be comprised of one solvent only, it may also be mixed of plurality of solvents. Such mixing might be a low pressure mixing and provided upstream of the mobile phase drive 20, so that the mobile phase drive 20 already receives and pumps the mixed solvents as the mobile phase. Alternatively, the mobile phase drive 20 might be comprised of plural individual pumping units, with plural of the pumping units each receiving and pumping a different solvent or mixture, so that the mixing of the mobile phase (as received by the separating device 30) occurs at high pressure and downstream of the mobile phase drive 20 (or as part thereof). The composition (mixture) of the mobile phase may be kept constant over time, the so-called isocratic mode, or varied over time, the so-called gradient mode.
[0074] A data processing unit 70, which can be a conventional PC or workstation, a thin client, a laptop, a netbook, a tablet, a smartphone, a smartwatch, a server including a cloud server or the like, might be coupled (as indicated by the dotted arrows) to one or more of the devices in the liquid separation system 10 in order to receive information and/or control operation. For example, the data processing unit 70 might control operation of the mobile phase drive 20 (e.g. setting control parameters) and receive therefrom information regarding the actual working conditions (such as output pressure, flow rate, etc. at an outlet of the pump). The data processing unit 70 might also control operation of the solvent supply 25 (e.g. monitoring the level or amount of the solvent available) and/or the degasser 27 (e.g. setting control parameters such as vacuum level) and might receive therefrom information regarding the actual working conditions (such as solvent composition supplied over time, flow rate, vacuum level, etc.). The data processing unit 70 might further control operation of the sample injector 40 (e.g. controlling sample introduction or synchronization of the sample introduction with operating conditions of the mobile phase drive 20). The separating device 30 might also be controlled by the data processing unit 70 (e.g. selecting a specific flow path or column, setting operation temperature, etc.), and send—in return—information (e.g. operating conditions) to the data processing unit 70. Accordingly, the detector 50 might be controlled by the data processing unit 70 (e.g. with respect to spectral or wavelength settings, setting time constants, start/stop data acquisition), and send information (e.g. about the detected sample compounds) to the data processing unit 70. The data processing unit 70 might also control operation of the fractionating unit 60 (e.g. in conjunction with data received from the detector 50) and provides data back. The data processing unit 70 might also process the data received from the system or its part and evaluate it in order to represent it in adequate form prepared for further interpretation.
[0075] The data processing unit 70 is preferably configured to control operation of the fluid handling unit 65, e.g. for handling sample fluid (typically contained in a respective receptacle) such as aspirating the sample fluid and/or injecting such aspirated sample fluid into the flow of the mobile phase from the mobile phase drive 20. The data processing unit 70 may also control handling of plural receptacles each containing a respective sample fluid to be injected. Further, the data processing unit 70 may control receiving separated compounds of sample fluid dispensed by the fractionating unit 60, e.g. for dispensing into one or more receptacles. The data processing unit 70 may further control handling such dispensed fluid (e.g. the separated compounds of sample fluid) by the fluid handling unit 65 e.g. for re-injection into the mobile phase or for depositing the respective receptacle either internally or externally with respect to the liquid separation system 10.
[0076]
[0077] The sampling volume 200 is configured for temporarily storing an amount of the received fluidic sample, and can be any of a sample loop, a sample volume, a trap volume, a trap column, a fluid reservoir, a capillary, a tube, a microfluidic channel structure. The retaining unit 220 is configured for receiving and retaining from the sampling volume 200 at least a portion of the fluidic sample stored in the sampling volume 200. The retaining unit 220 may be further configured to show different retention characteristics for different components of the fluidic sample.
[0078]
[0079] In the exemplary embodiment of
[0080] In
[0081] In
[0082] When the needle 215 will be immersed into the sample fluid within the receptacle 260 (not shown
[0083] By rotating the rotor with respect to the stator (not further shown in
[0084] By further rotating the rotor with respect to the stator (not further shown in
[0085]
[0086] The needle 215 has an essentially elongated shape with an open end, a needle tip 330, and is configured for aspirating fluid from any of the receptacles 260A-260G and/or dispensing the fluid into any of the receptacles 260A-260G.
[0087] The needle drive 310 is configured for spatially positioning the needle 215 with in the fluid handling unit 65. The needle drive 310 preferably comprises one or more of a linear stage, an xyz-robot, a robot arm, a manipulator, et cetera, allowing to position the needle 215 as readily known in the art and which does not need to be detailed here. Preferably, the needle drive 310 allows immersing the needle 215 into the respective receptacle 260 as well as removing the needle 215 from being immersed into the receptacle 260. The needle drive 310 may also allow to position the needle 215 into the needle seat 218, preferably in a fluid tight manner, thus allowing to prepare the sample injector 40 for injecting sample fluid into the mobile phase.
[0088]
[0089] Such caps 410 are often used in analytical applications, such as the liquid separation system 10, to seal the receptacle 260 e.g. to avoid evaporation of sample fluid. The cap 410 may comprise in its center a membrane which can be penetrated by the needle 215 to aspirate sample out of the receptacle 260. In certain embodiments, tapered vial inserts are used to minimise the sample volume inside the receptacle 260. This represents a receptacle in the receptacle or, in other words, a vial in a vial. In such embodiments, it is important that the needle 215 is exactly positioned in the center of the cap 410 e.g. to avoid collision with the vial insert.
[0090] The marking 430 as shown in the embodiment of
[0091] Returning to
[0092] In order to spatially position the needle 215 into the receptacle 260A (in the example of
[0093] It has been shown that an optical recognition process of the receptacle 260 may not be sufficient in real life situations to sufficiently securely position the needle 215 into the receptacle 260, e.g. as resulting from varying light conditions, reflecting surfaces, stray light, dirt, or others. To overcome such limitations, the invention applies an additional determining process in order to reliably position the needle 215 into the receptacle 260. Such determining process is based on the assumption that the marking 430 can be sufficiently accurately positioned on the receptacle 260, which can be ensured by applying state-of-the-art positioning of the marking 430, such as to apply a sufficiently accurate printing (or other type of depositing) of the marking 430 on the upper surface 420 of the cap 410.
[0094] With the assumption that the marking 430 is sufficiently accurately positioned with respect to the opening of the receptacle 260, the positioning of the needle 215 (with respect to the receptacle 260) can be applied in the sense of a positioning of the needle 215 (or better of the needle tip 330) with respect to the marking 430. In other words, the positioning of the needle 215 according to the present invention is provided with respect to the marking 430 (and not in respect of an optical recognition of the receptacle 260 as such).
[0095] Turning back to
[0096] In the exemplary embodiment of
[0097] It is clear that more than one marking can be used for determining the target position 530, such as both of the marking 430 and the alignment fiducial 440 as shown in
[0098] In the exemplary embodiment of
[0099] It is clear that the number of features for sufficiently accurately determining the target position 530 as well as whether a respective alignment fiducial 440 is part of an information containing marking 430 or not depends on the specifics of the chosen type of marking, type of detection, and/or the required accuracy of the target position 530.
[0100] Once the target position 530 has been determined by the control unit 70, the control unit 70 can operate the needle drive 310 to spatially position the needle tip 330 relative to the determined target position 530, preferably by positioning the needle tip 330 precisely onto the target position 530. The control unit 70 can then operate the needle drive 310 to lower the needle 215 into the receptacle 260 in the sense of penetrating the needle 215 through the target position 530 on the upper surface 420 of the cap 410 and into the body 400 of the receptacle 260. With the needle 215 thus immersing into the receptacle 260, the control unit 70 may then operate the metering device 245 to aspirate fluid from inside of the receptacle 260, e.g. into the sampling volume 200. Alternatively, with the needle 215 being immersed into the receptacle 260, the control unit 70 may operate the fractionating unit 60 to dispense portions of separated sample fluid into the receptacle 260.
[0101] As apparent from the described embodiment above, the needle 215 can be safely and sufficiently accurately aligned to the center of the receptacle 260, either by analysing an information containing part of the marking 430 and/or by analysing the alignment fiducial 440 which may also be subject of the information containing part of the marking 430.
[0102]