GADUSOL PRODUCTION
20200199631 ยท 2020-06-25
Inventors
- Taifo Mahmud (Corvallis, OR)
- Alan Bakalinsky (Corvallis, OR, US)
- Andrew Osborn (Corvallis, OR, US)
- Garrett Holzwarth (Corvallis, OR, US)
Cpc classification
International classification
Abstract
The present disclosure relates to engineered microorganisms capable of producing gadusol. The engineered microorganisms contain a nucleotide sequence encoding 2-epi-5-valione synthase (EEVS) and a nucleotide sequence encoding methyltransferase-oxidoreductase (MT-Ox). Methods of using the engineered microorganisms to produce gadusol, including the culturing of such microorganisms, are also described.
Claims
1. A transgenic yeast cell, comprising: a nucleotide sequence capable of expressing 2-epi-5-valione synthase (EEVS) protein integrated in a genome of the transgenic yeast cell; and a nucleotide sequence capable of expressing methyltransferase/oxidoreductase (MT-Ox) protein integrated in the genome of the transgenic yeast cell.
2. The transgenic yeast cell of claim 1, wherein the yeast cell comprises one or more disrupted transaldolase genes of the transgenic yeast cell, wherein the disruption results in a reduction of transaldolase activity in the transgenic yeast cell as compared to a wild-type yeast cell.
3. The transgenic yeast cell of claim 2, wherein the one or more disrupted transaldolase genes comprises TAL1.
4. The transgenic yeast cell of claim 2, wherein the one or more disrupted transaldolase genes comprises NQM1.
5. The transgenic yeast cell of claim 2, wherein the one or more disrupted transaldolase genes comprises both TAL1 and NQM1.
6. The transgenic yeast cell of claim 1, wherein the yeast cell is engineered to over express ZWF1.
7. The transgenic yeast cell of claim 1, wherein at least one of the nucleotide sequence capable of expressing EEVS protein and the nucleotide sequence capable of expressing MT-Ox protein are codon optimized for expression in yeast.
8. The transgenic yeast cell of claim 1, wherein the yeast cell comprises a Saccharomyces cerevisiae yeast cell.
9. The transgenic yeast cell of claim 1, wherein the nucleotide sequence capable of expressing EEVS protein comprises a yeast promoter operably connected to a nucleic acid sequence encoding a EEVS protein.
10. The transgenic yeast cell of claim 9, wherein the nucleic acid sequence encoding the EEVS protein comprises a nucleic acid sequence that encodes a protein having an amino acid sequence at least 95% identical to SEQ ID NO: 21.
11. The transgenic yeast cell of claim 9, wherein the nucleic acid sequence encoding the EEVS protein comprises a nucleic acid sequence at least 95% identical to any one of SEQ ID Nos 1-8.
12. The transgenic yeast cell of claim 1, wherein the yeast promoter is a yeast TEF) promoter.
13. The transgenic yeast cell of claim 1, wherein the nucleotide sequence capable of expressing MT-Ox protein comprises a yeast promoter operably connected to a nucleic acid sequence encoding a MT-Ox protein.
14. The transgenic yeast cell of claim 13, wherein the nucleic acid sequence encoding the MT-Ox protein comprises a nucleic acid sequence that encodes a protein having an amino acid sequence at least 95% identical to SEQ ID NO: 22.
15. The transgenic yeast cell of claim 13, wherein the nucleic acid sequence encoding the MT-Ox protein comprises a nucleic acid sequence at least 95% identical to any one of SEQ ID NOs: 9-16.
16. The transgenic yeast cell of claim 13, wherein the yeast promoter is a yeast PGK1 promoter.
17. The transgenic yeast cell of claim 1, wherein the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are integrated into the yeast genome at chromosome 15 at the his31 locus.
18. The transgenic yeast cell of claim 1, wherein the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are stably integrated.
19. The transgenic yeast cell of claim 18, wherein the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are stably integrated for at least 20 generations.
20. A bioreactor comprising a population of the transgenic yeast cell of claim 1.
21. A method for producing gadusol, the method comprising: culturing a transgenic yeast cell of claim 1 in growth media, wherein at least a portion of the gadusol is secreted into the growth media; and isolating gadusol from the growth media.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0031] Embodiments will be readily understood by the following detailed description in conjunction with the accompanying drawings. Embodiments are illustrated by way of example and not by way of limitation in the figures of the accompanying drawings.
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DETAILED DESCRIPTION OF DISCLOSED EMBODIMENTS
[0068] In the following detailed description, reference is made to the accompanying drawings which form a part hereof, and in which are shown by way of illustration embodiments that may be practiced. It is to be understood that other embodiments may be utilized and structural or logical changes may be made without departing from the scope. Therefore, the following detailed description is not to be taken in a limiting sense, and the scope of embodiments is defined by the appended claims and their equivalents.
[0069] Various operations may be described as multiple discrete operations in turn, in a manner that may be helpful in understanding embodiments; however, the order of description should not be construed to imply that these operations are order dependent.
[0070] The terms coupled and connected, along with their derivatives, may be used. It should be understood that these terms are not intended as synonyms for each other. Rather, in particular embodiments, connected may be used to indicate that two or more elements are in direct physical contact with each other. Coupled may mean that two or more elements are in direct physical contact. However, coupled may also mean that two or more elements are not in direct contact with each other, but yet still cooperate or interact with each other.
[0071] For the purposes of the description, a phrase in the form A/B or in the form A and/or B means (A), (B), or (A and B). For the purposes of the description, a phrase in the form at least one of A, B, and C means (A), (B), (C), (A and B), (A and C), (B and C), or (A, B and C). For the purposes of the description, a phrase in the form (A)B means (B) or (AB) that is, A is an optional element.
[0072] The description may use the terms embodiment or embodiments, which may each refer to one or more of the same or different embodiments. Furthermore, the terms comprising, including, having, and the like, as used with respect to embodiments, are synonymous, and are generally intended as open terms (e.g., the term including should be interpreted as including but not limited to, the term having should be interpreted as having at least, the term includes should be interpreted as includes but is not limited to, etc.).
[0073] With respect to the use of any plural and/or singular terms herein, those having skill in the art can translate from the plural to the singular and/or from the singular to the plural as is appropriate to the context and/or application. The various singular/plural permutations may be expressly set forth herein for sake of clarity.
[0074] Unless otherwise noted, technical terms are used according to conventional usage. Definitions of common terms in molecular biology can be found in Benjamin Lewin, Genes IX, published by Jones and Bartlet, 2008 (ISBN 0763752223); Kendrew et al. (eds.), The Encyclopedia of Molecular Biology, published by Blackwell Science Ltd., 1994 (ISBN 0632021829); and Robert A. Meyers (ed.), Molecular Biology and Biotechnology: a Comprehensive Desk Reference, published by VCH Publishers, Inc., 1995 (ISBN 9780471185710); and other similar references.
[0075] Suitable methods and materials for the practice or testing of this disclosure are described below. Such methods and materials are illustrative only and are not intended to be limiting. Other methods and materials similar or equivalent to those described herein can be used. For example, conventional methods well known in the art to which this disclosure pertains are described in various general and more specific references, including, for example, Sambrook et al., Molecular Cloning: A Laboratory Manual, 2d ed., Cold Spring Harbor Laboratory Press, 1989; Sambrook et al., Molecular Cloning: A Laboratory Manual, 3d ed., Cold Spring Harbor Press, 2001; Ausubel et al., Current Protocols in Molecular Biology, Greene Publishing Associates, 1992 (and Supplements to 2000); Ausubel et al., Short Protocols in Molecular Biology: A Compendium of Methods from Current Protocols in Molecular Biology, 4th ed., Wiley & Sons, 1999. In addition, the materials, methods, and examples are illustrative only and not intended to be limiting.
[0076] By bioreactor is meant a vessel comprising a liquid medium in which biological reactions are carried out by microorganisms, or the enzymes they produce, contained within the vessel itself. The term bioreactor is used throughout the specification to describe any vessel or container wherein the biological production and/or isolation of gadusol is carried out in a controlled fashion. The main objective in the design of a bioreactor is to generate an optimal environment for the desired biological process to take place on a large and economic scale. Bioreactors can be made from an inert material such as stainless steel or glass. An exemplary bioreactor may comprise a vertical Pyrex (glass) column that is adapted with at least two inlets for medium and air at the bottom of the column and at least one outlet port at the top of the column to accommodate expunged medium and/or air. See, for example, Hamdy, et al., Biomass., 21, 189-206 (1990).
[0077] As used herein, disrupted gene refers to an insertion, substitution, or deletion either in a gene of interest or in the vicinity of the gene, i.e., upstream (5) or downstream (3) of the gene, which results in the reduction of the biological activity or the loss of substantially all of the biological activity associated with the gene's product. For example, a disrupted TAL1 gene would be unable to express a protein having substantial TAL1 activity. A gene can be disrupted by any one of a number of methods known to the art, for example, by site-directed mutagenesis or homologous recombination.
[0078] Expression refers to the transcription and translation of an endogenous gene or a transgene in a host cell. For example, in the case of antisense constructs, expression may refer to the transcription of the antisense DNA only. In addition, expression refers to the transcription and stable accumulation of sense (mRNA) or functional RNA. Expression may also refer to the production of protein.
[0079] The term gene is used broadly to refer to any segment of nucleic acid associated with a biological function. Thus, genes include coding sequences and/or the regulatory sequences required for their expression. For example, gene refers to a nucleic acid fragment that expresses mRNA, or specific protein, including regulatory sequences. Genes also include nonexpressed DNA segments that, for example, form recognition sequences for other proteins. Genes can be obtained from a variety of sources, including cloning from a source of interest or synthesizing from known or predicted sequence information, and may include sequences designed to have desired parameters.
[0080] A mutation refers to an insertion, deletion or substitution of one or more nucleotide bases of a nucleic acid sequence, so that the nucleic acid sequence differs from the wild-type sequence. For example, a point mutation refers to an alteration in the sequence of a nucleotide at a single base position from the wild type sequence.
[0081] The term nucleic acid molecule refers to a polymer of DNA or RNA that can be single- or double-stranded, optionally containing synthetic, non-natural or altered nucleotide bases capable of incorporation into DNA or RNA polymers. The terms nucleic acid or nucleic acid sequence may also be used interchangeably with gene, cDNA, DNA and RNA encoded by a gene (Batzer et al., 1991; Ohtsuka et al., 1985; Rossolini et al., 1999).
[0082] Operably linked when used with respect to nucleic acid, means joined as part of the same nucleic acid molecule, suitably positioned and oriented for transcription to be initiated from the promoter. DNA operably linked to a promoter is under transcriptional initiation regulation of the promoter. Coding sequences can be operably-linked to regulatory sequences in sense or antisense orientation.
[0083] Overexpression refers to the level of expression in transgenic cells or organisms that exceeds levels of expression in corresponding normal or untransformed cells or organisms.
[0084] Promoter refers to a nucleotide sequence, usually upstream (5) to its coding sequence, which controls the expression of the coding sequence by providing the recognition for RNA polymerase and other factors required for proper transcription. An inducible promoter is a regulated promoter that can be turned on in a cell by an external stimulus, such as a chemical, light, hormone, stress, or a pathogen.
[0085] The terms protein, peptide and polypeptide are used interchangeably herein.
[0086] As used herein, a transgenic, transformed, or recombinant cell refers to a genetically modified or genetically altered cell, the genome of which comprises a recombinant DNA molecule or sequence (transgene). For example, a transgenic cell can be a cell transformed with a vector. A transgenic, transformed, or recombinant cell thus refers to a host cell such as yeast cell into which a heterologous nucleic acid molecule has been introduced. The nucleic acid molecule can be stably integrated into the genome by methods generally known in the art (e.g., disclosed in Sambrook and Russell, 2001). For example, transformed, transformant, and transgenic cells have been through the transformation process and contain a foreign or exogenous gene. The term untransformed refers to cells that have not been through the transformation process.
[0087] The term transformation refers to the transfer of a nucleic acid fragment into the genome of a host cell, or the transfer into a host cell of a nucleic acid fragment that is maintained extrachromosomally. A transgene refers to a gene that has been introduced into the genome by transformation. Transgenes may include, for example, genes that are heterologous or endogenous to the genes of a particular cell to be transformed. Additionally, transgenes may comprise native genes inserted into a non-native organism, or chimeric genes. The term endogenous gene refers to a native gene in its natural location in the genome of an organism. Such genes can be hyperactivated in some cases by the introduction of an exogenous strong promoter into operable association with the gene of interest. A foreign or an exogenous gene refers to a gene not normally found in the host cell but that is introduced by gene transfer.
[0088] Vector is defined to include, inter alia, any plasmid, cosmid, phage or other construct in double or single stranded linear or circular form that may or may not be self transmissible or mobilizable, and that can transform prokaryotic or eukaryotic host either by integration into the cellular genome or exist extrachromosomally, e.g., autonomous replicating plasmid with an origin of replication. A vector can comprise a construct such as an expression cassette having a DNA sequence capable of directing expression of a particular nucleotide sequence in an appropriate host cell, comprising a promoter operably linked to the nucleotide sequence of interest that also is operably linked to termination signals. An expression cassette also typically comprises sequences required for proper translation of the nucleotide sequence. The expression cassette comprising the nucleotide sequence of interest may be chimeric, meaning that at least one of its components is heterologous with respect to at least one of its other components. The expression cassette may also be one that is naturally occurring but has been obtained in a recombinant form useful for heterologous expression. The expression of the nucleotide sequence in the expression cassette may be under the control of a constitutive promoter or of an inducible promoter that initiates transcription only when the host cell is exposed to some particular external stimulus.
[0089] The term wild type refers to an untransformed cell, i.e., one where the genome has not been altered by the presence of the recombinant DNA molecule or sequence or by other means of mutagenesis. A corresponding untransformed cell is a typical control cell, i.e., one that has been subjected to transformation conditions, but has not been exposed to exogenous DNA.
[0090] In addition, a wild type gene refers to a gene, e.g., a recombinant gene, with its original or native DNA sequence, in contrast to a mutant gene.
[0091] Introduction
[0092] Gadusol (
[0093] The zebrafish (Danio rerio) EEVS-like gene having the sequence shown in SEQ ID NO. 1 was codon-optimized to provide SEQ ID NO. 2 for heterologous expression in Escherichia coli and synthesized commercially. Incubation of the recombinant protein with SH7P gave a product, which was confirmed by TLC, GC-MS, ESI-MS and 1H NMR to be 2-epi-5-epi-valiolone (EEV) (
[0094] MT-Ox gene sequence shown in SEQ ID NO: 9 (zgc: 113054) is predicted to encode a protein that contains two possible domains: the N-terminal domain is similar to SAM-dependent methyltransferases and the C-terminal domain is similar to NAD.sup.+-dependent oxidoreductases. The MT-Ox gene is a bifunctional protein involved in modifying EEV to yield a reduced and methylated product (
[0095] Gadusol or 3,5,6-trihydroxy-5-hydroxymethyl-2-methoxycyclohex-2-en-1-one is a cyclohexanone tautomer. Gadusol shifts between enol and enolate forms as a function of pH as shown in
[0096] Gadusol is synthesized from sedoheptulose 7-phosphate (SH7P), a pentose phosphate pathway (PPP) intermediate. As shown in
[0097] While chemical data for gadusol suggest a role as a sunscreen and antioxidant, in vivo studies are less clear. Gadusol's high molar absorptivity in the UV-B range first led to suggestions for a role as a sunscreen (Plack et al. 1981). Sunscreens like gadusol protect tissues by absorbing UV light before it can damage cells. UV-B causes damage through at least two known mechanisms. It induces pyrimidine dimer formation in DNA, leading to mutations and can also generate free radicals which lead to oxidation of lipids and proteins (Sinha and Hder 2002). The photostability of the gadusolate tautomer found at physiological pH supports a sunscreen role (Arbeloa et al. 2011). However, gadusol is found in relatively low concentrations in fish tissues except in the roe (Plack et al. 1981). In order for a sunscreen to be effective, it must be sufficiently concentrated to prevent UV irradiation from penetrating the periphery of the cell and reaching molecular targets. Sunscreens like gadusol, which are soluble in the cytosol, must reach a high-intracellular concentration to provide such protection (Garcia-Pichel 1994; Gao and Garcia-Pichel 2011). While gadusol has also been shown to exhibit antioxidant activity in vitro, it is unknown to what extent it contributes to such activity in vivo where NADPH and GSH play prominent roles. Gadusol may also have protective and tuning roles in animal vision, as it has been found in the lenses of the eyes of several marine animals. In addition to protecting sensitive tissues from UV-B-damage (Dunlap et al. 1989), gadusol also helps tune the UV vision of mantis shrimp by absorbing light in the 296-nm range, preventing activation of receptors that absorb light at that wavelength (Bok et al. 2014).
[0098] While it would be possible to harvest gadusol from naturally occurring sources, this would not be economical for producing the quantities of gadusol needed for commercially relevant sunscreen products. To overcome this and other problems, the inventors have developed methods and compositions that allow for the high efficiency production of gadusol in microorganism host cells, such as yeast. Expressing the biosynthetic genes for gadusol in microorganisms, such as yeast, provides an opportunity to leverage in-depth knowledge of yeast biochemistry to generate a sustainable process. Yeast possesses a robust pentose phosphate pathway, and by removing the transaldolase enzyme, which normally metabolizes SH7P, and adding EEVS and MT-Ox facilitated an effective shunt pathway from SH7P to gadusol. The mutant was cultured in YNB+2% glucose supplemented with leucine and lysine at 30 C. for 2 days. Analysis of the culture broth by HPLC, ESI-MS, and UV spectrophotometry revealed the presence of gadusol (
[0099] Sedoheptulose 7-phosphate (SH7P) is the natural precursor of gadusol and is a central intermediate in the pentose phosphate pathway, but is also derived from glycolytic intermediates (
[0100] The oxidative phase of the pentose phosphate pathway (PPP) is composed of three steps that generate two NADPH, a CO2 and the SH7P precursor, ribulose 5-phosphate. For emphasis, the oxidative phase of the pentose phosphate pathway originally shown in
[0101] The non-oxidative phase of the pentose phosphate pathway shuffles carbons between intermediates to generate a variety of phosphosugars, including SH7P, the precursor for gadusol. The non-oxidative phase of the pentose phosphate pathway originally shown in
[0102] An alternative SH7P biosynthetic pathway was recently described based on a previously unknown activity of Fbal described above, and a newly-discovered phosphatase, Shb17 (Clasquin et al. 2011). This pathway originally shown in
[0103] The combined deletion of TAL1 and PGI1 was reported to increase accumulation of SH7P 4-fold, relative to a tal1 mutant (Schaaff et al. 1990). Phosphoglucoisomerase (PGIJ) catalyzes the isomerization of glucose 6-phosphate to fructose 6-phosphate. One characteristic of pgi1 mutants is an inability to grow on glucose as sole carbon source (Aguilera 1987; Schaaff et al. 1990). Schaaff et al. (1990) isolated pgi1 mutants on growth medium containing 2% fructose and 0.1% glucose. pgi1 mutants must rely on the SH7P shunt or Tall activity to generate ribose 5-phosphate for growth because they cannot generate glucose 6-phosphate from fructose. tal1 pgi1 double mutants are forced to route carbon exclusively through the SHB17-shunt pathway to meet the cell's need for ribose 5-phosphate. Because pgi1 mutants are also unable to generate NADPH via the oxidative portion of the pentose phosphate pathway, they oxidize more acetaldehyde via an NADP.sup.+-dependent cytosolic aldehyde dehydrogenase (ALD6) and/or oxidize more isocitrate via NADP.sup.+-dependent cytosolic isocitrate dehydrogenase (IDP2) (Grabowska and Chelstowska 2003; Minard and McAlister-Henn 2005). Although pgi1 mutants cannot grow on glucose, a small amount (0.1%) is required for growth on fructose (Aguilera 1987). This requirement may arise from the role of glucose as a signaling molecule needed to induce expression of ribosomal protein genes (Pernambuco et al. 1996).
[0104] Description of Several Embodiments
[0105] The present disclosure provides genetically engineered microorganisms and methods for the production of gadusol, for example using the 2-epi-5-valione synthase (EEVS) and methyltransferase-oxidoreductase (MT-Ox) encoding nucleotide sequences of EEVS and MTOx proteins that are used by the microorganisms in the production of gadusol. Gadusol produced by the engineered microorganisms and methods disclosed herein is useful as a UV protectant, and thus the present disclosure contributes significantly to the improvement of human health and well-being. The engineered microorganisms present a new avenue for large-scale production of a UV protectant for possible commercial and clinical uses. Large-scale production allows for the use of gadusol in pharmaceuticals, formulations, cosmetics, or dietary formulations and products. By way of example, formulations may include pills/capsules, creams, lotions, or the like.
[0106] Disclosed is a transgenic yeast cell (or population thereof) that includes a nucleotide sequence capable of expressing EEVS integrated in a genome of the transgenic yeast cell and a nucleotide sequence capable of expressing MT-Ox integrated in the genome of the transgenic yeast cell. During the development of the disclosed genetically engineered microorganisms and methods, the inventors discovered that integration of the EEVS and MT-Ox genes into the genome of a yeast cell had the effect of increasing the production on gadusol over yeast strains where the two genes were carried on one or more plasmids, for example as integrated into yeast chromosome 15 at the his31 locus. Furthermore, such integration increased the stability of gadusol production from the yeast. For example, a yeast cell containing a linearized and modified construct with EEVS under the control of the yeast TEF1 promoter and CYCI terminator, MT-Ox under the control of the yeast PGK1 promoter and terminator was found to stably produce 64 mg/L vs 30 mg/L of gadusol. It was also found that integration resulted in yeast cells without significant loss of stability over time, for example, in tests no reduction in gadusol yields was noticed in cultures stored for weeks or months at storage conditions of 4 C. or over longer periods at 70 C. Additional advantages were also observed. For example, in a synthetic YNB-based medium, it had a doubling time of 1.7 hr vs 3.5 hr. In addition, this stable integration required no selection to maintain the genes, for example, one of the early plasmid expression systems tested required a medium lacking histidine and tryptophan. Absent such a selection requirement the yeast cells can be grown in a rich, histidine- and tryptophan-containing medium such as YEPD that will result in a much higher cell titer, and more gadusol. Gadusol production was found to be much more stable. That is, the ability to produce gadusol was lost within a few generations of growth by cells containing the plasmid-based expression system, whereas with the integrated genes, loss of gadusol production was only observed to drop after about 32 generations. By way of example, the yeast Saccharomyces cerevisiae may be engineered to include EEVS and MT-Ox sequences that are codon optimized for expression in yeast.
[0107] The yeast may be further engineered such that the EEVS and MT-Ox encoding sequences are under the control of at least one yeast promoter. In embodiments, the yeast cell comprises a Saccharomyces cerevisiae yeast cell. In embodiments, the nucleotide sequence capable of expressing EEVS comprises a yeast promoter operably connected to a nucleic acid sequence encoding a EEVS protein. In embodiments, the nucleic acid sequence encoding the EEVS protein comprises a nucleic acid sequence that encodes a protein having an amino acid sequence at least 95% identical to SEQ ID NO: 21, such as at least 95%, 96%, 97%, 98% 99% or even 100% identical. In embodiments, the nucleic acid sequence encoding the EEVS protein comprises a nucleic acid sequence at least 95% identical to any one of SEQ ID NOs 1-8, such as at least 95%, 96%, 97%, 98% 99% or even 100% identical. In embodiments, the yeast promoter is a yeast TEF1 promoter. In embodiments, nucleotide sequence capable of expressing MT-Ox protein comprises a yeast promoter operably connected to a nucleic acid sequence encoding a MT-Ox protein. In embodiments, the nucleic acid sequence encoding the MT-Ox protein comprises a nucleic acid sequence that encodes a protein having an amino acid sequence at least 95% identical to SEQ ID NO: 22, such as at least 95%, 96%, 97%, 98% 99% or even 100% identical. In embodiments, the nucleic acid sequence encoding the MT-Ox protein comprises a nucleic acid sequence at least 95% identical to any one of any one of SEQ ID NOs: 9-16, such as at least 95%, 96%, 97%, 98% 99% or even 100% identical. In embodiments, the yeast promoter is a yeast PGK1 promoter. In embodiments, the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are integrated into the genome of the yeast at chromosome 15 at the his31 locus. In embodiments, the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are stably integrated. In embodiments, the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are stably integrated for at least 20 generations, such as at least 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30 or more. In embodiments, at least one of the nucleotide sequence capable of expressing EEVS and the nucleotide sequence capable of expressing MT-Ox are codon optimized for expression in yeast.
[0108] In embodiments, the yeast cell includes one or more disrupted transaldolase genes of the transgenic yeast cell, wherein the disruption results in a reduction of transaldolase activity in the transgenic yeast cell as compared to a wild-type yeast cell. In embodiments, the one or more disrupted transaldolase genes comprises TAL1. In embodiments, the one or more disrupted transaldolase genes comprises NQMJ. In embodiments, the one or more disrupted transaldolase genes comprises both TAL1 and NQM1.
[0109] The inventors further discovered that over expression of ZWF1 further increased the gadusol production. In embodiments, the transgenic yeast cell is engineered to over express ZWF1. This strain carries an overexpressed yeast gene called ZWF1 that encodes glucose 6-P dehydrogenase. This enzyme catalyzes the first step in the oxidative phase of the pentose phosphate pathway (PPP). This step is also believed to be rate-limiting for the PPP (Ralser et al., 2007; Stincone et al., 2015). Because the PPP generates the gadusol precursor sedoheptulose 7-P (S7P), it was thought that overexpression of ZWF1 would lead to more gadusol by increasing the pool of S7P. In fact, in tests it produced 37 mg/L gadusol vs 22 mg/L for which was isogenic except for the overexpressed ZWF1 gene.
[0110] A method for producing gadusol, the method comprising culturing transgenic yeast cell disclosed herein, for example in growth media. In embodiments, at least a portion of the gadusol is secreted into the growth media, for example, were it can be collected. The growth media may be a Yeast Nitrogen Base (YNB) that supports the growth of an engineered strain of yeast. Alternatively, the growth media may support the growth of an engineered bacterial strain. Generally, the method includes culturing a recombinant microorganism harboring functional EEVS and MT-OX genes at a sufficient temperature under sufficient conditions and for a sufficient period of time to allow for the production of gadusol. By way of example, the culturing temperature may be approximately 30 C. Preferably, the temperature is adjusted to match the optimal temperature for the type of microorganism being used, such a yeast strain.
[0111] In some embodiments, a starter culture may be used. For example, an engineered microorganism may be cultured for approximately 24-48 hours in YNB. The YNB may include approximately 2% glucose and necessary essential amino acids or nucleic acid bases that the strain itself cannot make. The starter culture may be used to inoculate a larger volume of the same or similar medium that is then cultured at an appropriate temperature for a period of time sufficient for maximum production of gadusol. By way of example, the engineered microorganism may be cultured up to 5 days. After the microorganism is cultured the gadusol containing broth may be subject to centrifugation (1,000g) to provide a cell pellet and a cell-free broth that contains the produced gadusol. The cell-free broth may be extracted and the produced gadusol may be substantially purified from the cell-free broth. By way of example, extracting the cell-free broth may be accomplished with an equal volume of n-butanol. The resulting butanol phase may be recovered using a separatory funnel and the n-butanol removed by rotoevaporation to provide for a gadusol containing residue. The residue may be dissolved in methanol or distilled water or other polar solvent and subjected to various standard chromatographic steps to remove unwanted impurities and provide for substantially pure gadusol. In some embodiments, methods for producing gadusol are carried out in an engineered yeast strain configured for producing gadusol. The engineered yeast may secrete the produced gadusol.
[0112] The nucleic acid sequences disclosed herein and/or used for the production of gadusol and the construction of such nucleic acid sequences and/or expression vectors that may be employed in conjunction with the present disclosure will be known to those of skill of the art in light of the present disclosure (see, e.g., Sambrook and Russell, 2001). The expression sequences of the disclosure may contain one or a plurality of restriction sites allowing for placement of the polynucleotide encoding functional EEVS and MT-OX genes under the regulation of a regulatory sequence. The expression cassette may also contain a termination signal operably linked to the polynucleotide as well as regulatory sequences required for proper translation of the polynucleotide. The expression cassette containing the polynucleotide of the disclosure may be chimeric, meaning that at least one of its components is heterologous with respect to at least one of the other components. Expression of the polynucleotide in the expression cassette may be under the control of a constitutive promoter, inducible promoter, regulated promoter, viral promoter or synthetic promoter. The expression cassette may include, in the 5-3 direction of transcription, a transcriptional and translational initiation region, the polynucleotide of the disclosure and a transcriptional and translational termination region functional in vivo and/or in vitro. The termination region may be native with the transcriptional initiation region, may be native with the polynucleotide, or may be derived from another source. The regulatory sequences may be located upstream (5 non-coding sequences), within (intron), or downstream (3 non-coding sequences) of a coding sequence, and influence the transcription, RNA processing or stability, and/or translation of the associated coding sequence. Regulatory sequences may include, but are not limited to, enhancers, promoters, repressor binding sites, translation leader sequences, introns, and polyadenylation signal sequences. They may include natural and synthetic sequences as well as sequences that may be a combination of synthetic and natural sequences.
[0113] Propagation of yeast cells in culture has become a regular procedure in recent years, and the yeast cells of the present disclosure may be grown using conventional techniques. Yeast strains of the disclosure may be cultured in any appropriate medium known to the art for the particular strain (see, for example, Adams et al., 1998). For example, S. cerevisiae strains may be grown at 30 C. in complete yeast extract/peptone/dextrose (YPD) medium supplemented with 2% glucose. Alternatively, the minimal selective medium with 2% glucose supplemented with auxotrophic requirements can be used.
[0114] A transgenic yeast cell of the disclosure may contain a selective marker, thus requiring selective conditions for culture, e.g., conditions that require the expression of a plasmid encoded gene for growth. Most selective markers currently in use are genes coding for enzymes of amino acid or purine biosynthesis. This makes it necessary to use synthetic minimal media deficient in the corresponding amino acid or purine base. However, some genes conferring antibiotic resistance may be used as well (e.g. genes conferring resistance to cycloheximide or to the amino-glycoside G418). Yeast cells transformed with vectors containing antibiotic resistance genes may be grown in complex media containing the corresponding antibiotic whereby faster growth rates and higher cell densities can be reached. Yeast cells transformed with DNA integrating into the chromosomes do not require selective growth conditions. These transformed cells are sufficiently stable to allow growth without selective pressure. For the above reason, these cells are advantageously grown in complex media.
[0115] Further disclosed is a bioreactor comprising a population of the transgenic yeast cell disclosed herein. Any one of a number of bioreactors known to the art can be used with the transgenic yeast cell of the disclosure for the production of gadusol. In some embodiments, methods for producing gadusol are carried out in an engineered bacterial or yeast strain configured for producing gadusol. The engineered bacteria or yeast may secrete the produced gadusol. In some embodiments, the methods for producing gadusol are carried out in a microorganism that lacks, or is engineered to lack, a functional TAL1 gene.
EXAMPLES
Example 1
[0116] Materials and Methods
[0117] Media and Growth Conditions
[0118] Cells were grown in 2 YEPD (2% yeast extract, 4% peptone, and 4% glucose) for transformations, and in minimal medium (M) (Bacto yeast nitrogen base [YNB] without amino acids) (6.7 g/L)+2% glucose supplemented with histidine (20 g/ml), leucine (30 g/ml), lysine (30 g/ml), tryptophan (20 g/ml), or uracil (10 g/ml) as needed. pgi1 mutants were grown in YNB+2% fructose+0.1% glucose with supplements as needed. YNB+NADPH nutr. is YNB+2% glucose supplemented with 20 g/ml ergosterol from a 2 mg/ml ergosterol stock dissolved in 1:1 (vol/vol) EtOH:Tween 80, lysine (30 mg/ml), tryptophan (20 mg/ml), histidine (20 mg/ml), phenylalanine (50 mg/ml), and tyrosine (30 mg/ml). Stocks of all antibiotics were stored at 20 C. Ampicillin was prepared as an aqueous sterile-filtered 1000 stock (100 mg/ml). G-418 was prepared as an aqueous sterile-filtered 500 stock (100 mg/ml). Hygromycin B was prepared as an aqueous sterile-filtered 500 stock (150 mg/ml). The stocks were filtered through a sterile 0.45-m filter. Agar-based media were sterilized by autoclaving. Liquid cultures were grown at 30 C. and 200 rpm; plates were incubated statically at 30 C.
[0119] For growth and gadusol experiments, isolated colonies from selective media were used to inoculate 2 ml cultures. The 2 ml cultures were grown for either 16 or 48 h at 30 C. and 200 RPM. Cells were harvested by centrifugation, washed with sterile water, and counted using hemocytometer. Cells were inoculated into 75 ml of media that was then split into three 25 ml cultures in 125-ml Erlenmeyer flasks to yield an initial cell density=10.sup.5 cell/ml. Cultures were incubated at 30 C. and 200 RPM. Cultures were sampled periodically to measure growth (A.sub.600) and gadusol (A.sub.296).
[0120] Transformations
[0121] Yeast was transformed using the lithium acetate method (Gietz and Woods 2001). Briefly, the strain to be transformed was grown overnight at 30 C. and 200 RPM in 1 ml of 2YEPD in an incubator shaker. The overnight culture was used to inoculate 25 ml of 2YEPD at a concentration of 510.sup.6 cells/ml. The 25 ml 2YEPD culture was kept at 30 C. and 200 RPM until at least two cell doublings had occurred. Cells were then harvested by centrifugation at 1,200 g and washed twice with sterile water. An aliquot of 210.sup.8 cells was then transferred to a 1.5 ml Eppendorf tube and centrifuged at 16,000 RPM in a microcentrifuge. Supernatant was removed from the tube without disturbing cells. The following chemicals and DNAs were then added in this specific order: 240 l 50% (w/v) polyethylene glycol 3500, 36 l lithium acetate, 50 l 2.0 mg/ml single-stranded carrier DNA, and 34 l of plasmid or PCR amplicon DNA. The transformation mixture was then mixed by pipetting and incubated at 42 C. for 40 minutes. Cells were pelleted to remove the transformation mixture and then washed with 1 ml of sterile water before plating on selective media.
[0122] E. coli strains were transformed according to suppliers' directions for chemically competent TOP10 cells (Invitrogen) and NEB-23 cells (New England Biolabs). Suppliers' directions briefly stated that 50 l aliquots of the cells were to be removed from 70 C. storage and thawed on ice for 10 minutes. A 1-5 l aliquot of DNA was added to the thawed cells followed by a 30-minute incubation on ice. After the incubation, the DNA-treated cells were heat shocked for 30 sec at 42 C. followed by a second 5 min incubation on ice. Cells were resuspended in 950 l of SOC medium before aliquots were plated on selective media and grown at 37 C.
[0123] Strain Construction
[0124] E. coli strains (Table 1) maintained on LB+amp at 37 C. Liquid cultures were grown at 37 C. and shaken at 200 RPM.
TABLE-US-00001 TABLE 1 Strain Genotype Origin BL21 B F.sup. ompT gal dcm lon hsdS.sub.B(r.sub.B.sup.m.sub.B.sup.) [malB.sup.+].sub.K12(.sup.S) Stratagene Inc., CA DH5 F.sup.endA1 glnV44 thi-1 recA1 relA1 gyrA96 deoR nupG ThermoFisher purB20 80dlacZM15 (lacZYA-argF)U169, Scientific Inc., hsdR17(r.sub.K.sup.m.sub.K.sup.+), .sup. Waltham, MA NEB-5 DH5 derivative New England Biolabs Inc., Ipswich, MA NEB-10 DH10B derivative, F mcrA (mrr-hsdRMS-mcrBC) New England 80lacZM15 lacX74 recA1 endA1 araD139 (araleu) Biolabs Inc., 7697 galU galK rpsL nupG Ipswich, MA TOP10 F mcrA (mrr-hsdRMS-mcrBC) 80lacZM15 ThermoFisher lacX74 recA1 araD139 (araleu)7697 galU galK rpsL Scientific Inc., (StrR) endA1 nupG Waltham, MA
[0125] Yeast strains (Table 2) were constructed as described below.
TABLE-US-00002 TABLE 2 Strain Genotype Origin BY4742 MAT his31 leu20 lys20 ura30 ATC 204508, Manassas,VA BY4742 tal1 MAT tal1::KanMX4 his31 leu20 lys20 Thermo Fisher ura30 Scientific Inc., Waltham, MA BY4742 trp1 MAT his31 leu20 lys20 ura30 This study trp1::URA3 G0 MAT his31 leu20 lys20 ura30 This study trp1::URA3/pXP416-MTOx, pXP420-EEVS G1 MAT tal1::KanMX4 his31 leu20 lys20 This study ura30 trp1::URA3/pXP416-MTOx, pXP420- EEVS G2 MAT tal1::KanMX4 nqm1::LEU2 his31 This study leu20 lys20 ura30 trp1::URA3/pXP416- MT-Ox, pXP420-EEVS G2C MAT tal1::KanMX4 nqm1::LEU2 his31 This study leu20 lys20 ura30 trp1::URA3/pXP416, pXP420 G3 MAT tal1::KanMX4 nqm1::LEU2 This study his31::pGH420-EEVS-MTOx-2 leu20 lys20 ura30 trp1::URA3 G4 MAT tal1::KanMX4 nqm1::LEU2 This study pgil::TRP1 his31::pGH420-EEVS-MTOx- 2 leu20 lys20 ura30 trp1::URA3 G5 MAT tal1::KanMX4 pgi1::TRP1 This study his31::pGH420-EEVS-MTOx-2 leu20 lys20 ura30 trp1::URA3 G6 MAT tal1::KanMX4 nqm1::Leu2 This study shb17::HphMX his31 leu20 lys20 ura30 trp1::URA3/pXP416-MTOx, pXP420-EEVS G7 MAT tal1::KanMX4 nqm1::Leu2 This study his31::pGH420-EEVS-MTOx-2 leu20 lys20 ura30 trp1::URA3/pXP416-SHB17 G8 MAT tal1::KanMX4 nqm1::Leu2 This study his31::pGH420-EEVS-MTOx-2 TEF1 TEF1::pXP416-SHB17-2 leu20 lys20 ura30 trp1::URA3 G9 MAT tal1::KanMX4 his31 leu20 lys20 This study ura30 pho13::HphMX trp1::URA3/pXP416- MT-Ox, pXP420-EEVS G10 MAT tal1::KanMX4 his31 leu20 lys20 This study ura30 trp1::URA3/pXP416-MT-Ox, pXP420- EEVS, pXP422-ZWF1
[0126] G0 (BY4742 trp1/pXP416-MTOx, pXP420-EEVS)
[0127] TRP1 in BY4742 was deleted by replacement with a 1.8 Kb PCR amplicon encoding URA3. The URA3 amplicon was generated using the TRP1DisURA3UP/LO primers (SEQ ID NO. 23 and 24) according to standard methods (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected on M+his+trp+leu+lys. The deletion of TRP1 was confirmed by diagnostic PCR, using the TRP1DisUP/LO primers (SEQ ID NO. 27 and 28) to generate a unique PCR amplicon of the URA3 gene inserted at the TRP1 locus (1.9 Kb). The BY4742 trp1 strain was co-transformed with both pXP416-MTOx (SEQ ID NO. 10 from the original provisional to which a stop codon has now been added) and pXP420-EEVS (SEQ ID NO. 2 from the original provisional to which a stop codon has now been added) using the lithium acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+leu+lys.
[0128] G1 (BY4742 tal1 trp1/pXP416-MTOx, pXP420-EEVS)
[0129] TRP1 in BY4742 tal1::KanMX4 was deleted by replacement with a 1.8 Kb PCR amplicon encoding URA3. The URA3 amplicon was generated using the TRP1DisURA3UP/LO primers according to standard methods (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected on M+his+trp+leu+lys+G418. Deletion of TRP1 was confirmed by diagnostic PCR using the TRP1DisUP/LO primers (SEQ ID NO. 27 and 28) to generate a unique PCR amplicon of the URA3 gene inserted at the TRP1 locus (1.9 Kb). The BY4742 tal1 trp1 strain was co-transformed with both pXP416-MTOx (SEQ ID NO. 10) and pXP420-EEVS (SEQ ID NO. 2) using the lithium acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+leu+lys.
[0130] G2 (BY4742 tal1 nqm1 trp1/pXP416-MTOx, pXP420-EEVS)
[0131] NQM1 in BY4742 tal1::KanMX4 was deleted by replacement with a 3.1 Kb PCR amplicon encoding LEU2. The LEU2 amplicon was generated using the NQM1DisLEU2UP/LO primers (SEQ ID NO.40 and 41) according to standard methods (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected on M+his+trp+lys. Deletion of NQM1 was confirmed by diagnostic PCR using NQM1UP/LO primers (SEQ ID NO. 42 and 43) to generate a unique 4.2 Kb PCR amplicon. The BY4742 tal1 trp1 nqm1 strain was co-transformed with both pXP416-MTOx (SEQ ID NO. 10) and pXP420-EEVS (SEQ ID NO. 2) using the lithium acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+leu+lys.
[0132] G2C (BY4742 tal1 nqm1 trp1/pXP416, pXP420)
[0133] The BY4742 tal1 trp1 nqm1 strain was co-transformed with both pXP416 and pXP420 using the lithium acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+leu+lys.
[0134] G3 (tal1 nqm1 trp1 his3::pGH420-EEVS-MTOx-2)
[0135] BY4742 tal1::KanMX4 trp1 nqm1 was transformed with NdeI-linearized pGH420-EEVS-MTOx-2 (SEQ ID NO. 79) to direct integration to the his3 locus according to standard methods (Gietz and Woods 2001). Transformants were selected on M+lys+trp. Integration of pGH420-EEVS-MTOx-2 (SEQ ID NO. 79) at the his3 locus was confirmed by diagnostic PCR targeting the junction between HIS3 and the MTOx gene (SEQ ID NO. 10) to generate a 2.3 Kb amplicon using HIS3MTOx-F/R primers (SEQ ID NO. 86 and 87).
[0136] G4 (BY4742 tal1 nqm1 trp1 pgi1 his3::pGH420-EEVS-MTOx)
[0137] PGI1 in BY4742 tal1::KanMX4 trp1 nqm1 his3::pGH420-EEVS-MTOx-2 was deleted by replacement with a 1.9 Kb PCR amplicon encoding TRP1. The TRP1 amplicon was generated using the PGI1DisTRP1UP/LO primers (SEQ ID NO. 44 and 45) according to standard protocols (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected and maintained on YNB+2% fructose+0.1% glucose+lys. Deletion of PGI1 was confirmed by diagnostic PCR using PGI1DisUP/LO primers (SEQ ID NO. 46 and 47) to generate a unique 3.2 Kb PCR amplicon.
[0138] G5 (BY4742 tal1 trp1 pgi1 his3::pGH420-EEVS-MTOx)
[0139] PGI1 in BY4742 tal1::KanMX4 trp1 was deleted by replacement with a 1.9 Kb PCR amplicon encoding TRP1. The TRP1 amplicon was generated using the PGI1DisTRP1UP/LO primers according to standard protocols (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected and maintained on YNB+2% fructose+0.1% glucose+his+leu+lys. Deletion of PGI1 was confirmed by diagnostic PCR using PGI1DisUP/LO primers (SEQ ID NO. 44 and 45) to generate a unique 3.2 Kb PCR amplicon. BY4742 tal1::KanMX4 trp1 pgi1 was transformed with NdeI-linearized pGH420-EEVS-MTOx-2 (SEQ ID NO. 79) to direct integration to the his3 locus according to standard methods (Baudin et al. 1993). Transformants were selected on YNB+2% fructose+0.1% glucose+leu+lys. Integration of pGH420-EEVS-MTOx-2 (SEQ ID NO. 79) at the his3 locus was confirmed by diagnostic PCR targeting the junction between the HIS3 marker and the MTOx gene (SEQ ID NO. 10) using HIS3MTOx-F/R primers (SEQ ID NO. 86 and 87) to generate a 2.3 Kb amplicon.
[0140] G6 (BY4742 tal1 trp1 nqm1 shb17/pXP416-MTOx, pXP420-EEVS)
[0141] SHB17 in BY4742 tal1 trp1 nqm1 was deleted by replacement with a 1.6 Kb PCR amplicon encoding HphMX. HphMX was generated using SHB17disHphUP/LO primers (SEQ ID NO. 48 and 49) according to standard protocols (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected and maintained on YEPD+hygromycin B. Deletion of SHB17 (SEQ ID NO. 77) was confirmed by diagnostic PCR using SHB17DisUP/LO (SEQ ID NO. 50 and 51) to generate a unique 2 Kb PCR amplicon. BY4742 tal1 trp1 nqm1 shb17 was co-transformed with both pXP416-MTOx (SEQ ID NO. 10MTOx only, not pXP416) and pXP420-EEVS (SEQ ID NO. 2EEVS only, not pXP420) according to the lithium-acetate method. Transformants were selected and maintained on M+lys.
[0142] G7 (BY4742 tal1 trp1 nqm1 his3::pGH420-EEVS-MTOx-2/pXP416-SHB17)
[0143] BY4742 tal1 trp1 nqm1 his3::pGH420-EEVS-MTOx-2 was transformed with pXP416-SHB7 (SEQ ID NO. 77SHB17 only, not pXP416) according to the lithium-acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+lys.
[0144] G8 (BY4742 tal1 trp1 nqm1 his3::pGH420-EEVS-MTOx TEF1::pXP416-SHB7-2)
[0145] BY4742 tal1 trp1 nqm1 his3::pGH420-EEVS-MTOx was transformed with BbsI-linearized pXP416-SHB17-2 (SEQ ID NO. 80) to direct integration to the TEF1 locus according to the lithium-acetate method (Gietz and Woods 2001). The 2 yeast replicative origin was removed (2) to ensure construct integration. Transformants were selected and maintained on M+lys media. Integration of pXP416-SHB17-2 (SEQ ID NO. 80) at the TEF1 locus could not be verified by PCR. However, growth on the selection medium indicates integration of at least the TRP1 gene with the genome.
[0146] G9 (BY4742 tal1 trp1 pho13/pXP416-MTOx, pXP420-EEVS)
[0147] PHO13 (SEQ ID NO. 81) in BY4742 tal1 trp1 was deleted by replacement with a 1.6 Kb PCR amplicon encoding HphMX. The HphMX amplicon was generated using the PHO13HphUP/LO primers according to standard methods (Baudin et al. 1993; Gietz and Woods 2001). Transformants were selected on YEPD+hygromycin B. Deletion of PHO13 (SEQ ID NO. 81) was confirmed by diagnostic PCR using PHO13UP/LO primers (SEQ ID NO. 54 and 55) to generate a unique 2.4 Kb PCR amplicon. The BY4742 tal1 trp1 pho13 strain was co-transformed with both pXP416-MTOx (SEQ ID NO. 10MTOx only) and pXP420-EEVS (SEQ ID NO. 2EEVS only) using the lithium acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+leu+lys.
[0148] G10 (BY4742 tal1 trp1/pXP416-MTOx, pXP420-EEVS, pXP422-ZWF1)
[0149] BY4742 tal1 trp1 was transformed with pXP420-EEVS (SEQ ID NO. 2-EEVS only), pXP416-MTOx (SEQ ID NO. 10MTOx only), and pXP422-ZWF1 (SEQ ID NO. 78ZWF1 only) according to the lithium-acetate method (Gietz and Woods 2001). Transformants were selected and maintained on M+lys.
[0150] DNA Primers
[0151] DNA primers needed to construct yeast strains and plasmids are listed in Table 3.
TABLE-US-00003 TABLE3 Primer SEQ Name IDNO: Sequence(5.fwdarw.3) Notes TRP1DisURA3UP SEQID TATAGGAAGCATTTAATAGAACAGC TRP1-annealing NO.23 ATCGTAATATATGTGTACTTTGCAG sequence TTATGACGCCGAAATTGAGGCTACT underlined GCGCC TRP1DisURA3LO SEQID CCTGTGAACATTCTCTTCAACAAGT TRP1-annealing NO.24 TTGATTCCATTGCGGTGAAATGGTA sequence AAAGTCAACCGGCAGCGTTTTGTTC underlined TTGGA TRP1DisUP SEQID CTCACCCGCACGGCAGAGAC NO.27 TRP1DisLO SEQID TGCCGGCGGTTGTTTGCAAG NO.28 NQM1DisLEU2UP SEQID TTCTTGCTAGCGTAAGTCATAAAAA LEU2-annealing NO.40 ATAGGAAATAATCACATATATACAA sequence GAAATTAAATCACTGTTCACGTCGC underlined ACCTA NQM1DisLEU2LO SEQID ATTATACGTCAGAATTTTAATGAAT LEU2-annealing NO.41 ATATAAGTCTGTACACTATGCTATG sequence CACATATACTGCTGCATTAATGAAT underlined CGGCCA NQM1DisUP SEQID AAAACTCACATCGCACGCAC NO.42 NQM1DisLO SEQID GAGCTGAAAGCAATTCTAAATCCA NO.43 PGI1DisTRP1UP SEQID ACCCAGAAACTACTTTGTTTTTGAT TRP1-annealing NO.44 TGCTTCCAAGACTTTCACTACCGCT sequence GAAACTATCAATGCGTAAGGAGAAA underlined ATACC PGI1DisTRP1LO SEQID AGATAGAACCAGTAGAGTAGTCAGT TRP1-annealing NO.45 AAACACGTTACCTCTGGTAACAGAC sequence TTACCGTTAGATGCAGCTCAGATTC underlined TTTGT PGI1DisUP SEQID GGCAAGAACCGGGATGGTAA NO.46 PGI1DisLO SEQID TGTAGTTACTTGGACGCTGTTC NO.47 SHB17DisHphUP SEQID AGCACATTTTGTTCATAGCTAAGTG HphMX-annealing NO.48 GATAGGGAAACACCTACACTTAATT sequence GCAAGCAACAGGGCATGATGTGACT underlined GTCGCCC SHB17DisHphLO SEQID AAAAAATGTTTTTATCACTTTCTAT HphMX-annealing NO.49 AACTGCATATCTTTTTTTGCATTTC sequence GAATGATTGCTCTGGGCAGATGATG underlined TCGAGGC SHB17DisUP SEQID CCACCGCCAAATTGCTATCC NO.50 SHB17DisLO SEQID ACAGTCCTTTGTACTATCCCTTTTA NO.51 PHO13HphUP SEQID AGCCAAATCACAAAAAAAGCCTTAT HphMX-annealing NO.52 AGCTTGCCCTGACAAAGAATATACA sequence ACTCGGGAAAGGGCATGATGTGACT underlined GTCGCCC PHO13HphLO SEQID AAACCTGAATATTTTTCCTTTTCAA HphMX-annealing NO.53 AAAGTAATTCTACCCCTAGATTTTG sequence CATTGCTCCTTCTGGGCAGATGATG underlined TCGAGGC PHO13Up SEQID AAGTGGCTTGAGCTGTGGAT NO.54 PHO13LO SEQID GGTTCTTCTGCTGCATTAGGC NO.55 MTOXUP SEQID AGATCCACTAGTATGCAAACGGCAA SpeIsite NO.34 AAGTCTC underlined MTOXLO SEQID TAGCCACTCGAGTCACCACAGAGAC XhoIsite NO.35 TGACCG underlined PTEF1-Spe1- SEQID TTCTTGCTCATTAGAAAGAAAGCAT pXP416-annealing SHB17 NO.56 AGCAATCTAATCTAAGTTTTAATTA sequence CAAAACTAGTATGCCTTCGCTAACC underlined CCC TCYC1-XhoI- SEQID GAGCGGATGTGGGGGGAGGGCGTGA pXP416-annealing SHB17 NO.57 ATGTAAGCGTGACATAACTAATTAC sequence ATGACTCGAGTTACACATCGCCATG underlined CTGGG DEEVSUP SEQID AGATCCACTAGTATGGAACGTCCGG SpeIsite NO.32 GCGAAAC underlined DEEVSLO SEQID TAGCCACTCGAGTCACTGCGGTGAG XhoIsite NO.33 CCGGT underlined A-HIS3-F SEQID ACTATATGTGAAGGCATGGCTATGG Pairedwith NO.58 CACGGCAGACATTCCGCCAGATCAT B-HIS3-R CAATAGGCACcttcattcaacgttt cccatt B-HIS3-R SEQID GTTGAACATTCTTAGGCTGGTCGAA Pairedwith NO.59 TCATTTAGACACGGGCATCGTCCTC A-HIS3-F TCGAAAGGTGtgatgcattaccttg tcatc B-PPGK1-FII SEQID ACCTTTCGAGAGGACGATGCCCGTG Pairedwith NO.60 TCTAAATGATTCGACCAGCCTAAGA MT-P.sub.PGK1-RII ATGTTCAACcctgacttcaactcaa gacgc MT-P.sub.PGK1-RII SEQID CAGCAGATGTTCCACAATAAATTCA Pairedwith NO.61 ACCGGGGTGTCCGAGACTTTTGCCG B-PPGK1-FII TTTGCATactagtatatttgttgta aaaagtagataattacttcc MTOx-F SEQID ACGTCTCACGGATCGTATATGCCGT Pairedwith NO.62 AGCGACAATCTAAGAACTATGCGAG MTOx-R GACACGCTAGactagtatgcaaacg gcaaaagtctc MTOx-R SEQID AATCACTCTCCATACAGGGTTTCAT Pairedwith NO.63 ACATTTCTCCACGGGACCCACAGTC MTOx-F GTAGATGCGTctcgagtcaccacag agactgaccg Ox-T.sub.PGK1-FII SEQID GCATCCGACTACATGACCGGTCACA Pairedwith NO.64 ATCTGGTTATTGAAGGCGGTCAGTC C-T.sub.PGK1-RII TCTGTGGTGAattgaattgaattga aatcgatagatca C-T.sub.PGK1-RII SEQID GCCTACGGTTCCCGAAGTATGCTGC Pairedwith NO.65 TGATGTCTGGCTATACCTATCCGTC OX-T.sub.PGK1-FII TACGTGAATAttttgttgcaagtgg gatga C-2-F SEQID TATTCACGTAGACGGATAGGTATAG Pairedwith NO.66 CCAGACATCAGCAGCATACTTCGGG D-2-R AACCGTAGGCgaattcgtatgatcc aatatc D-2-R SEQID TGCCGAACTTTCCCTGTATGAAGCG Pairedwith NO.67 ATCTGACCAATCCTTTGCCGTAGTT C-2-F TCAACGTATGgaattcaacgaagca tctgtgc D-ORI-F SEQID CATACGTTGAAACTACGGCAAAGGA Pairedwith NO.68 TTGGTCAGATCGCTTCATACAGGGA E-AMP-R AAGTTCGGCAaaaggcggtaatacg gtta E-AMP-R SEQID GTCACGGGTTCTCAGCAATTCGAGC Pairedwith NO.69 TATTACCGATGATGGCTGAGGCGTT D-ORI-F AGAGTAATCTgaaaaaggaagagta tgagtattc E-PTEF1-F SEQID AGATTACTCTAACGCCTCAGCCATC Pairedwith NO.70 ATCGGTAATAGCTCGAATTGCTGAG A-TCYC1-RII AACCCGTGACaccgcgaatccttac atcac A-TCYC1-RII SEQID GTGCCTATTGATGATCTGGCGGAAT Pairedwith NO.71 GTCTGCCGTGCCATAGCCATGCCTT E-PTEF1-F CACATATAGTcagacaagctgtgac cgtct HIS3MTOx-F SEQID CTTGGATTTATGGCTCTTTTGG Confirmationof NO.86 pGH420-EEVS- MTOx-2 integration HIS3MTOx-R SEQID CTTAGCCTTCAGCAGATGTTCC Confirmationof NO.87 pGH420-EEVS- MTOx-2 integration ZWF1SpeIUP SEQID AGATCCACTAGTATGAGTGAAGGCC SpeIrestriction NO.88 CCGTC site underlined ZWF1XhoILO SEQID AGATCCCTCGAGCTAATTATCCTTC XhoIrestriction NO.89 GTATCTTC site underlined
[0152] Construction of Plasmids
[0153] Plasmids (Table 4) were constructed as described below. Plasmid maps are shown in
TABLE-US-00004 TABLE 4 Plasmid Feature E. coli carrier Source/reference pRSETB-EEVS EEVS (EcoRV) BL-21 (Osborn et al. 2015) pRSETB-MTOX MTOx (EcoRV BL-21 (Osborn et al. 2015) pXP416 TRP1; TEF1 DH5 (Fang et al. 2011) promoter pXP416-MTOx MT-Ox NEB-10 (Osborn et al. 2015) (SpeI + XhoI) pXP416-SHB17 SHB17 TOP10 pXP416- SHB17, and TOP10 SHB17-2 missing 2 ORI pXP420 HIS3; TEF1 DH5 (Fang et al. 2011) promoter pXP420-EEVS EEVS TOP10 (Osborn et al. 2015) (SpeI + XhoI) pGH420-EEVS- EEVS, MT-Ox TOP10 MTOx pGH420-EEVS- EEVS, TOP10 MTOx-2 MT-Ox, and missing 2 ORI pXP422 LEU2; TEF1 TOP10 (Fang et al. 2011) promoter pXP422-ZWF1 ZWF1 NEB-5
[0154] pXP416-MTOx (SEQ ID NO. 10MTOx Only)
[0155] pXP416 plasmid was extracted and purified from a 1-ml culture of DH5a/pXP416 E. coli grown in LB+amp. An aliquot of pXP416 was digested with SpeI- and XhoI-restriction enzymes yielding a 5.8 Kb fragment. SpeI-, XhoI-digested plasmid was gel purified using a Qiagen gel-purification kit. The MTOx cDNA (SEQ ID NO. 10MTOx only) was amplified by PCR from pRSETB-MTOx (SEQ ID NO. 10MTOx only) yielding a 1.7 Kb amplicon. The MTOXUP/MTOXLO primers (SEQ ID NO. 34 and 35) used for amplification attached a SpeI site to the 5-end and a XhoI site to the 3-end of the cDNA. The MTOx PCR amplicon (SEQ ID NO. 10MTOx with added 5 SpeI site 3 XhoI site) flanked by SpeI and XhoI sites was digested with SpeI and XhoI and gel purified using a gel-purification kit (Qiagen). The purified SpeI-XhoI-digested MTOx cDNA (SEQ ID NO. 10) was ligated into SpeI-XhoI-digested pXP416 using New England Biolab's T4 DNA ligase kit. The ligation mixture was used to transform competent TOP10 E. coli (Invitrogen). Transformants were selected and maintained on LB+amp plates. Construction of pXP420-MTOx (SEQ ID NO. 10MTOx only) (
[0156] pXP416-SHB17
[0157] SHB17 (SEQ ID NO. 77) was cloned into pXP416 by homologous recombination to avoid disrupting the SHB17 ORF by cutting with XhoI. SHB17 was amplified using PTEF1-Spe1-SHB17/TCYC1-XhoI-SHB17 primers (SEQ ID NO.56 and 57) that contained 60-bp of sequence homologous to both ends of SpeI-XhoI-linearized pXP416. BY4742 tal1 trp1 was transformed with SHB17 amplicon (SEQ ID NO. 77) and SpeI-XhoI linearized pXP416 plasmid according to standard methods (Gietz and Woods 2001). Transformants were selected and maintained on M+his+leu+lys. The plasmid was rescued from a yeast transformant by extracting DNA according to a genomic DNA extraction protocol and used to transform competent TOP10 E. coli (Schwartz and Sherlock 2016). Plasmid DNA was extracted and purified from E. coli transformants using a plasmid miniprep kit (Qiagen). Construction of pXP416-SHB17 (SEQ ID NO. 77SHB17 only) was verified by digestion with BbsI and analysis by gel electrophoresis which yielded 2.8 and 3.8 Kb fragments as expected.
[0158] pXP416-SHB17-2
[0159] The yeast origin of replication (2) sequence was removed from pXP416-SHB17 (SEQ ID NO. 77SHB17 only) by digestion with EcoRI. Five nanograms of EcoRI-digested pXP416-SHB7 DNA (SEQ ID NO. 77SHB17 only) were added to a T4 ligase-mediated ligation reaction after which competent TOP10 E. coli was transformed with 5 l of the reaction mixture. Transformants were selected on LB+Amp. Construction of pXP416-SHB17-2 (SEQ ID NO. 77SHB17 only) (
[0160] pXP420-EEVS
[0161] pXP420 plasmid was extracted and purified from a 1-ml culture of DH5a/pXP420 E. coli grown in LB+amp. An aliquot of pXP420 was digested with SpeI- and XhoI-restriction enzymes yielding a 6.0 Kb fragment. SpeI-, XhoI-digested plasmid was gel purified using a Qiagen gel-purification kit. The EEVS cDNA (SEQ ID NO. 2) was amplified by PCR from pRSETB-EEVS (SEQ ID NO. 2EEVS only) yielding a 1.4 Kb amplicon. The DEEVSUP/DEEVSLO primers (SEQ ID NO. 32 and 33) used for amplification attached a SpeI site to the 5-end and a XhoI site to the 3-end of the cDNA. The EEVS PCR amplicon (SEQ ID NO. 2EEVS with added 5SpeI and 3XhoI sites) bordered by SpeI and XhoI sites was digested with SpeI and XhoI and gel purified using a Qiagen gel-purification kit. The purified SpeI-XhoI digested EEVS cDNA (SEQ ID NO. 2EEVS with added 5SpeI and 3XhoI sites) was ligated into SpeI-XhoI digested pXP420 using New England Biolab's T4 DNA ligase kit. The ligation mixture was then used to transform competent TOP10 E. coli from Invitrogen. Transformants were selected and maintained on LB+amp plates. Construction of pXP420-EEVS (SEQ ID NO. 2EEVS only) (
[0162] pGH420-EEVS-MTOx
[0163] A plasmid expressing both EEVS (SEQ ID NO. 2EEVS only) and MTOx (SEQ ID NO. 10MTOx only) was constructed using in vivo ligation. BY4742 tal1 trp1 nqm1 was co-transformed with seven PCR amplicons as described in Example 2. Yeast transformants were selected on M+trp+lys. Plasmid DNA was purified from a yeast transformant and used to transform E. coli. Transformants were selected on LB+amp and verified as described in the Example 2.
[0164] pGH420-EEVS-MTOx-2
[0165] To facilitate stable integration of the pGH420-EEVS-MTOx plasmid (SEQ ID NOs. 2 and 10-EEVS and MTOx only) into the yeast genome the yeast origin of replication (2) was first digested with EcoRI restriction enzyme for 30 min at 37 C. EcoRI-digested pGH420-EEVS-MTOx (SEQ ID NOs. 2 and 10-EEVS and MTOx only) was then heated to 65 C. for 20 min to inactivate enzyme. Digested plasmid was diluted 20-fold in a T4 DNA ligase reaction to circularize the construct without the 2 sequence (
[0166] pXP422-ZWF1 (SEQ ID No. 78)
[0167] pXP422 plasmid was extracted and purified from a 1-ml culture of TOP10/pXP420 E. coli grown in LB+amp. An aliquot of pXP422 was digested with SpeI- and XhoI-restriction enzymes yielding a 6.3 Kb fragment. SpeI-, XhoI-digested plasmid was gel purified using a Qiagen gel-purification kit. The ZWF1 gene (SEQ ID NO. 78) was amplified by PCR from BY4742 yielding a 1.5 Kb amplicon. The ZWF1SpeIUP/ZWF1XhoILO primers (SEQ ID NOs. 88 and 89) used for amplification attached a SpeI site to the 5-end and a XhoI site to the 3-end of the gene. The ZWF1 PCR amplicon (SEQ ID NO. 78 with added 5 XhoI and 3 SpeI sites) bordered by SpeI and XhoI sites was digested with SpeI and XhoI and gel purified using a Qiagen gel-purification kit. The purified SpeI-XhoI digested ZWF1 gene (SEQ ID NO. 78 with added 5 XhoI and 3 SpeI sites) was ligated into SpeI-XhoI digested pXP422 using New England Biolab's T4 DNA ligase kit. The ligation mixture was then used to transform competent TOP10 E. coli from Invitrogen. Transformants were selected and maintained on LB+amp plates. Construction of pXP422-ZWF1 (SEQ ID NO. 78ZWF1 only) (
[0168] Measurements of Biomass and Gadusol
[0169] Yeast biomass was monitored spectrophotometrically at A.sub.600 using a UV-visible spectrophotometer (Shimadzu UV-1601). Cultures were diluted with distilled water such that the measured values did not exceed 0.3 because previous measurements had shown this to be the limit of linearity for this spectrophotometer. Actual A.sub.600 values were calculated by multiplying by the dilution factor. Exit from log phase was determined to estimate when gadusol production was relative to growth. Exit from log phase was estimated by finding the intersection of an exponential growth trend line fitted to cultures in log phase and a polynomial trend line fitted to cultures exiting log phase (Microsoft Excel, Redmond, Wash.). An example featuring strain G2 may be found in
[0170] To measure extracellular gadusol from a culture, yeast cells were spun down and a sample of culture supernatant was diluted to 50 mM phosphate, pH 7. The absorbance of the supernatant was measured at 296 nm using distilled water as a blank. Gadusol concentrations were calculated according to Beer's law using gadusol's extinction coefficient, 21,800 M.sup.1 cm.sup.1 at pH 7 in 50 mM phosphate. This value was determined previously for a gadusol sample of undefined purity (Plack et al. 1981). The formula below accounts for background absorbance at 296 nm due to non-gadusol components in the fermentation. The average A.sub.296/A.sub.600 ratio (0.0537) of a control strain (G2C) grown in triplicate for three days at 30 C. and 200 RPM, was subtracted from the A.sub.296/A.sub.600 ratio of a sample to correct for background A.sub.296 absorbance. The difference in ratios was then multiplied by the sample's A.sub.600, giving absorbance from gadusol which was then divided by gadusol's extinction coefficient (21,800 M.sup.1 cm.sup.1) to determine molarity.
[0171] (A.sub.296%).sub.Gad=The A.sub.296 of a yeast culture supernatant as described in the preceding section.
[0172] (A.sub.600).sub.Gad=The A.sub.600 of a yeast culture as described in the preceding section.
[0173] Statistical Analysis
[0174] Statistical significance (p<0.05) of differences was determined using Student's two-tailed, paired t test (Microsoft Excel, Redmond, Wash.).
[0175] Results and Discussion
[0176] The gadusol biosynthetic pathway in vertebrates was recently shown to originate from the pentose phosphate pathway intermediate SH7P and to require two enzymes: EEVS and bifunctional MT-Ox (Osborn et al. 2015). cDNAs encoding the two genes from zebrafish (Danio rerio) were expressed in E. coli and were shown to mediate the in vitro conversion of S7P to EEV, and the SAM- and NAD.sup.+-dependent conversion of EEV to gadusol, respectively. In order to explore the possibility of producing gadusol in yeast, the cDNAs were sub-cloned into the yeast expression vectors pXP420 and pXP416 to yield pXP420-EEVS (SEQ ID NO. 2EEVS only) and pXP416-MTOx (SEQ ID NO. 10MTOx only), respectively. Both vectors contained the same strong constitutive S. cerevisiae promoter, TEF1, but different selectable markers. Table 5 lists a set of gadusol-producing strains that were constructed and provides characteristics related to growth and gadusol yields. Although the strains have been numbered, no relationship is necessarily implied based on the numerical designation. Strains and interventions that increased gadusol yields are presented earlier in the table and reflect their position in the text, while the remaining strains and interventions follow.
TABLE-US-00005 TABLE 5 Gadusol Time to End of made (%) reach Doubling log after maximal Biomass (A ) Maximal time phase exiting gadusol at maximal gadusol Strain Conditions (h)
(h) log phase (h) gadusol
(mg/L)
Feature G0 YNB + 2% glu + 2.0 0.1
17 96 110 1.30 0.3
11.9 0.1
TAL1 NQM1/pXP416-MTOx, pXP420- leu + lys EEVS G1 YNB + 2% glu + 3.
0.4
2
87 110 1.42 0.04
22.4 0.5
tal1 NQM1/pXP416-MTOx, pXP420- leu + lys EEVS G10 YNB + 2% glu + 3.0 1.4
39 93 207 3.31 0.47
36.7 1.5
tal1 NQM1/pXP422-ZWF1, pXP41
- lys MTOx, pXP420-EEVS G2 YNB + 2% glu + 3.5 0.1
33 93 130 3.07 0.8
30.1 0.2
tal1 nqm1/pXP416-MTOx, pXP420- lys EEVS G3 YNB + 2% glu + 1.7 0.0
15 98 169 3.
4 0.42
64.1 7.5
tal1 nqm1 his31::pGH420-EEVS- lys + trp MTOx-2
G3 2xlys + 2Xtrp 2.1 0.7
24 86 155 5.5
0.20
5.7 1.4
tal1 nqm1 his31::pGH420-EEVS- MTOx-2
G3 2xtrp 2.5 0.1
27 85 1
5.000.13
.sup.
.
6.3
tal1 nqm1 his31::pGH420-EEVS- MTOx-2
G3 2xlys 2.3 0.0
23 88 131 3.50 0.29
3.3 3.9
tal1 nqm1 his31::pGH420-EEVS- MTOx-2
G3 YNB + 2% glu + 3.6 0.2
35 95 186 1.
0.05
13.7 0.4
tal1 NQM1 pho13/pXP416-MTOx, leu + lys pXP420-EEVS G6 YNB + 2% glu + 5.0 0.
60 74 1
6 2.91 0.05
17.
0.8
tal1 nqm1 shb17/pXP416-MTOx, lys pXP420-EEVS G7 YNB + 2% glu + 4.4 0.1
48 84 106 4.76 0.15
28.4 3.5
tal1 nqm1 his31::pGH420-EEVS- lys MTOx-2
/pXP416-SHB17 G8 YNB + 2% glu + 2.0 0.0 17 98 208 3.44 0.22
0.
2.
.sup. tal1 nqm1 his31::pGH420-EEVS- lys MTOx-2
/pXP416-SHB17 integrant G3 NADPH
. 2.
0.1
32 85 2
0 3.67 0.14
7.8 2.2
tal1 nqm1 his31::pGH420-EEVS- MTOx-2
G4 YNB + 2%
+ 8.
0.4
47 83 2
4 2.
6 0.0
53.0 4.7
tal1 nqm1 pgl1 his31::pGH420- 0.1% glu + lys EEVS-MTOx-2
G5 YNB + 2%
+ 4.2 0.5
39 90 302 0.93 0.21
15.1 3.0
tal1 NQM1 pgl1 his31::pGH420- 0.1% glu + leu + lys EEVS-MTOx-2
indicates data missing or illegible when filed
[0177] EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) Expression is Sufficient for Gadusol Synthesis in S. cerevisiae
[0178] A trp1 derivative of the laboratory haploid BY4742 was co-transformed with both plasmids to generate strain G0 that was found to produce 12 mg/L of gadusol after 110 h (
[0179] Overexpression of ZWF1 Increases Gadusol Production
[0180] ZWF1 (SEQ ID NO. 78) encodes glucose 6-P dehydrogenase which catalyzes the first step in the oxidative phase of the PPP (Stincone et al. 2015). A ZWF1-overexpressing mutant (G10) was constructed in the G1 background (tal1) because it is thought to be the rate-limiting step in the PPP (Ralser et al. 2007; Stincone et al. 2015). Overexpression of ZWF1 was therefore expected to divert more glucose 6-P from glycolysis to the PPP to form more S7P, the gadusol precursor.
[0181] The G10 strain produced 37 mg/L of gadusol compared to 22 mg/L for G1, a 68% increase (
[0182] Elimination of a Second Transaldolase Gene NQM1 Increases Gadusol Yield
[0183] NQM1 encodes a paralogue of TAL1 (Huang et al. 2008). While the encoded enzyme is not active during fermentative growth on glucose, it is heavily transcribed during respiratory growth on glycerol (21, 31). Deletion of NQM1 was expected to eliminate all known transaldolase activity and therefore increase gadusol yields. To this end, the G2 strain (tal1 nqm1) was constructed and compared to G1 (tal1).
[0184] The G2 strain produced 30 vs 22 mg/L of gadusol or 36% more than G1, but required 130 h to reach this level. While the two strains grew at about the same rate (t.sub.d3.5 h), G2 produced twice as much biomass as G1 (A.sub.600=3.1 vs 1.4). It is likely that decreased throughput in the PPP blocked by a lack of transaldolase activity elevated levels of ribose 5-P which in turn fueled greater carbon assimilation. G2 produced more than twice the gadusol made by G1 during stationary phase.
[0185] Chromosomal Integration of a Plasmid Carrying EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) Leads to Increased Gadusol Production
[0186] The limited number of genetic markers available in the G2 strain necessitated redesigning the gadusol expression system. In order to eliminate the need for two plasmids (and two genetic markers), both EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) genes were cloned into a single plasmid by in vivo ligation to generate pGH420-EEVS-MTOx (SEQ ID NO. 2 and 10-EEVS and MTOx only). The plasmid was then converted into an integrative construct by excision of the 2 yeast origin of replication. The pGH420-EEVS-MTOx-2P A construct (SEQ ID NO. 79) was digested with NdeI and used to transform a tal1 nqm1 yeast mutant. Prior digestion with NdeI was meant to facilitate integration of the construct at the NdeI site in the his31 locus. The resultant strain was designated G3 (
[0187] The G3 strain produced 64 vs 30 mg/L of gadusol or 113% more than G2, but required 169 h to reach this concentration. In contrast, G2 reached 30 mg/L by 130 h. G3 grew much faster than G2 (t.sub.d=1.6 vs 3.5 h), but did not produce significantly more biomass, (A.sub.600=3.5 vs 3.1). The observation that G3 grew more than two times faster than G2 and that the only difference between the strains was the integrated construct vs two high copy plasmids suggests that the plasmids caused growth inhibition. Inclusion of constitutive glycolytic promoters on plasmids has been reported to reduce yeast growth rates by 12-15% (Grgens et al. 2001). In this particular case, the authors speculated that multiple copies of plasmid-borne constitutive promoters could attenuate the transcriptional machinery by titrating a limited number of transcription factors and RNA polymerases which would normally exist in excess.
[0188] Supplementation with the Growth-Limiting Nutrients Tryptophan and Lysine has No Effect on Gadusol Yield
[0189] Supplementing growth medium with the nutrients lysine (Lys) and tryptophan (Trp) was tested as a means to increase gadusol production. Supplementation had no significant effect on gadusol production by G3 (64 vs 63-67 mg/L).
[0190] The culture treated with 2Lys+2Trp (
[0191] Doubling the concentration of lysine alone had no effect on peak A.sub.600 (3.5 vs 3.5) or gadusol levels, however it was found to reduce the time to reach final gadusol by 38 h compared to the standard YNB+2% glucose+lys+trp medium (
[0192] Deletion of PHO13 Decreases Gadusol Production
[0193] PHO13 (SEQ ID NO. 81) encodes a phosphatase whose deletion was found to upregulate the second and third steps of the PPP, 6-phosphogluconolactonase (SOL3) and 6-phosphogluconate dehydrogenase (GNDI) (Kim et al. 2015). pho13's upregulation of the PPP was originally identified during a screen for mutants with enhanced xylose fermentation rates (Ni et al. 2007). It was thought that a pho13 mutation would enhance gadusol yield by increasing expression of two enzymes that provide precursors for S7P biosynthesis. A pho13 mutant in the tal1, gadusol-producing background was designated G9 (
[0194] G9 produced 36% less gadusol (14 vs 22 mg/L) than G1, but required 185.6 h to reach this concentration. In contrast, G1 reached 22 mg/L by 110 h. G9 and G1 reached comparable cell densities (A.sub.600=1.6 vs 1.4). G9 grew at the same rate as G1 (t.sub.d=3.6 h). It is unclear why pho13 lead to a substantial decrease in gadusol yield. Increased expression of the two steps after glucose 6-P dehydrogenase was expected to cause accumulation of PPP intermediates. However, if such accumulation occurred it did not result in improved gadusol yield and hindered production.
[0195] The SHB17 Shunt is a Key Source of S7P for Gadusol Biosynthesis
[0196] Sedoheptulose 7-P can be generated from the PPP and glycolytic intermediates erythrose 4-P and DHAP by a two-step pathway. Erythrose 4-P and DHAP combine to form sedoheptulose 1,7-P via an additional activity of Fbal (Clasquin et al. 2011). Sedoheptulose 1,7-P is then dephosphorylated by the phosphatase Shb17 to generate S7P. SHB17 (SEQ ID NO. 77) was deleted to determine if the SHB17 (SEQ ID NO. 77) shunt is a significant source of S7P.
[0197] As shown in
[0198] Overexpression of SHB17 (SEQ ID NO. 77) does not Increase Gadusol Yield
[0199] Because deletion of SHB17 (SEQ ID NO. 77) reduced gadusol yield, it was reasoned that overexpression of SHB17 (SEQ ID NO. 77) would lead to an increase. SHB17 (SEQ ID NO. 77) was overexpressed in the transaldolase mutant strain G3 (tal1 nqm1) and designated G7. Contrary to expectations, overexpression of SHB17 (SEQ ID NO. 77) decreased gadusol production as shown in
[0200] It is unclear why overexpression of SHB17 (SEQ ID NO. 77) failed to increase gadusol yield. Based on the improvement in gadusol production observed when the gadusol construct was integrated it was decided to integrate the SHB17 construct to determine if eliminating plasmid burden would improve yield. The resultant strain was designated G8.
[0201] As shown in
[0202] Supplementation with Nutrients to Increase Activity of Shb17 does not Increase Gadusol Yield
[0203] Previous work has shown that growing yeast in YNB+2% glucose medium with nutrients that require NADPH for biosynthesis increased production of ribose 5-P via the SHB7 (SEQ ID NO. 77) shunt while repressing the PPP reactions that generate NADPH (Clasquin et al. 2011). Supplementing the growth medium for G3 was rationalized to increase gadusol yield by forcing more glycolytic intermediates to enter the PPP via the SHB17 (SEQ ID NO. 77) shunt and increase the amount of available S7P. Supplementation was expected to reduce the requirement for NADPH while maintaining the need for ribose 5-P. Biosynthetic requirements for ribose 5-P were expected to draw intermediates from the SHB7 (SEQ ID NO. 77) shunt towards S7P, providing a source of precursor for gadusol biosynthesis.
[0204] As shown in
[0205] Eliminating Phosphoglucoisomerase Activity in Transaldolase Mutants does not Increase Gadusol Yield.
[0206] Deletion of PGI1 was rationalized to increase gadusol yields in the transaldolase mutant background based on a report showing a tal1 pgi1 mutant accumulating up to 4-fold more S7P than a tal1 strain (Schaaff et al. 1990). PGI1 encodes a phosphoglucoisomerase that converts glucose 6-P to fructose 6-P. Phosphoglucoisomerase-transaldolase double mutants (pgi1 tal1) are unable to grow on glucose as the sole carbon source because glycolysis is interrupted after glucose 6-P formation (Aguilera 1986). These mutants must rely on the SHB7 (SEQ ID NO. 77) shunt to generate S7P and ribose 5-P. PGI1 mutants in both the tal1 nqm1 (G4) and tal1 (G5) backgrounds were generated. Gadusol production was evaluated in YNB+2% fructose+0.1% glucose medium supplemented with lysine for G4 and both lysine and tryptophan for G5.
[0207] As shown in
[0208] Promoter Titration May Inhibit Gadusol Production
[0209] Simultaneous integration of the gadusol biosynthesis genes into yeast chromosome XV and promoter swapping led to a doubling in gadsuol yield from 30 to 64 mg/L. Although the integrated construct used a different promoter for MTOx (P.sub.PGK1), this change is unlikely to explain the increase in gadusol yield because P.sub.PGK1 possess roughly half of the activity of P.sub.TEF1 as estimated using a GFP assay (Sun et al. 2012). Promoters on high-copy plasmids can deplete transcription factors, and RNA polymerase activity leading to competition for transcription machinery that is normally in excess. Because constitutive promoters typically derive from genes encoding essential functions (e.g., translation or glycolysis), promoter titration can lead to growth defects (Grgens et al. 2001). Integration of EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) decreased the doubling time of G3 compared to G2 (t.sub.d=1.7 vs 3.5 h). Integrating EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) would leave limited copies of the promoters in each cell, reducing competition for transcription factors. Using the same promoter (P.sub.TEF1) to express both EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) in G2 could have led to reduced expression of these genes in addition to growth defects. Determining expression levels for EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) in the G2 and G3 strains would help determine if gene expression increased after integration or if gadusol yield improved because of changes in growth from plasmid integration.
[0210] Observations from the SHB17 (SEQ ID NO. 77) overexpression experiments support a role for promoter titration in gadusol production. Introduction of the high-copy plasmid pXP416-SHB7 (PTEF1) (SEQ ID NO. 77SHB17 only) into the G3 strain led to a sharp decrease in gadusol production (64 vs 28 mg/L). Integration of a construct derived from pXP416-SHB7 (SEQ ID NO. 77SHB17 only) resulted in the near complete restoration of gadusol production in strain G8 (60 vs 64 mg/L). This difference suggests that high-copy plasmids have an inhibitory effect on gadusol production that should be recognized when testing further interventions. Measuring gadusol production and expression of EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) in G3 derivative strains carrying empty P.sub.TEn-expression vector or integrated P.sub.TEF1-expression vector would help support this conclusion.
[0211] Conclusion
[0212] This study demonstrated that rational genetic interventions were able to increase gadusol yields approximately 5-fold. Deleting both transaldolase genes (TAL1 and NQM1) resulted in a 2.5-fold increase in gadusol yield compared to the tal1 mutant. Overexpressing the glucose 6-P dehydrogenase gene (ZWF1) (SEQ ID NO. 78) in a tal1 strain caused a 64% increase in gadusol yield. Integrating the gadusol genes and switching the promoter for MTOx (SEQ ID NO. 10) doubled gadsuol production relative to a tal1 nqm1 strain expressing the gadusol genes from free plasmids. In most of the strains studied, 83-98% of gadusol was made after exiting log phase.
Example 2
[0213] Construction of pGH420-EEVS-MTOx (SEQ ID NO. 82)
[0214] A plasmid expressing both EEVS (SEQ ID NO. 2) and MTOx (SEQ ID NO. 10) was constructed using in vivo ligation as described, according to the scheme outlined in
[0215] PCR primers designed to amplify DNA sequences containing the HIS3 marker, PGK1 promoter, MTOx ORF (SEQ NO. 10), PGK1 terminator, 2 yeast ORI, E. coli AMP.sup.r-ORI sequence, and the EEVS (SEQ NO. 2) expression cassette are listed in Table 3. Primers containing 5-60-bp barcode sequences were designed using the sequences described in Table 7. The barcode sequences lacked homology to the yeast genome, limiting the risk of chromosomal recombination. In the case of MTOx (SEQ NO. 10) (3) a portion of the ORF sequence was used to target recombination. Specifically, the downstream end of fragment 2 contained 60-bp of homology to the 5-region of the MTOx ORF (SEQ NO. 10) while the upstream region of fragment 4 contained 60-bp of homology to 3-region of the MTOx ORF (SEQ NO. 10).
TABLE-US-00006 TABLE7 Barcode sequence Sequence5-3 A SEQID ACTATATGTGAAGGCATGGCTATGGC NO.72 ACGGCAGACATTCCGCCAGATCATCA ATAGGCAC B SEQID CACCTTTCGAGAGGACGATGCCCGTG NO.73 TCTAAATGATTCGACCAGCCTAAGAA TGTTCAAC C SEQID TATTCACGTAGACGGATAGGTATAGC NO.74 CAGACATCAGCAGCATACTTCGGGAA (This CCGTAGGC isa portion of SEQID NO.66) D SEQID CATACGTTGAAACTACGGCAAAGGAT NO.75 TGGTCAGATCGCTTCATACAGGGAAA GTTCGGCA E SEQID AGATTACTCTAACGCCTCAGCCATCA NO.76 TCGGTAATAGCTCGAATTGCTGAGAA CCCGTGAC
[0216] The PCR conditions used to amplify the components of the plasmid construct were modified from the manufacturer's instructions for the polymerase (Thermofisher Phusion Hot Start II). Primer concentrations were lowered from 500 to 200 nM and polymerase concentration was raised from 0.02 to 0.03 U/l. Amplicons were gel-purified using a Qiagen gel purification kit. To improve DNA extraction, after a PCR amplicon was excised from a horizontal gel, the slice was cut into a top layer (A) and a bottom layer (B) (
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In: Origins of Life and Evolution of the Biosphere. pp 321-347 [0232] Garcia-Pichel F (1994) A model for internal self-shading in planktonic organisms and its implications for the usefulness of ultraviolet sunscreens. Limnol Oceanogr 39:1704-1717. doi: 10.4319/lo.1994.39.7.1704 [0233] Gietz R D, Woods R (2001) Genetic transformation of yeast. Biotechniques 30:816-831 [0234] Grgens J F, Van Zyl W H, Knoetze J H, Hahn-Hgerdal B (2001) The metabolic burden of the PGK1 and ADH2 promoter systems for heterologous xylanase production by Saccharomyces cerevisiae in defined medium. Biotechnol Bioeng 73:238-245. doi: 10.1002/bit.1056 [0235] Grabowska D, Chelstowska A (2003) The ALD6 gene product is indispensable for providing NADPH in yeast cells lacking glucose-6-phosphate dehydrogenase activity. J Biol Chem 278:13984-8. doi: 10.1074/jbc.M210076200 [0236] Grant P T (1980) Gadusol, a metabolite from fish eggs. Tetrahedron Lett 21:4043-4044 [0237] Huang H, Rong H, Li X, et al (2008) The crystal structure and identification of NQM1/YGR043C, a transaldolase from Saccharomyces cerevisiae. Proteins Struct Funct Bioinforma 73:1076-1081. doi: 10.1002/prot.22237 [0238] Kim S R, Xu H, Lesmana A, et al (2015) Deletion of PHO 13, Encoding Haloacid Dehalogenase Type IIA Phosphatase, Results in Upregulation of the Pentose Phosphate Pathway in Saccharomyces cerevisiae. Appl Environ Microbiol 81:1601-1609. doi: 10.1128/AEM.03474-14 [0239] Kuijpers N G A, Solis-escalante D, Bosman L, et al (2013) A versatile, efficient strategy for assembly of multi-fragment expression vectors in Saccharomyces cerevisiae using 60 bp synthetic recombination sequences. Microb Cell Fact 12:1-13 [0240] Michel S, Keller M A, Wamelink MMC, Ralser M (2015) A haploproficient interaction of the transaldolase paralogue NQM1 with the transcription factor VHR1 affects stationary phase survival and oxidative stress resistance. 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Example 3
[0256] EEVS and MT-Ox
[0257] The inventors made the discovery that gadusol is synthesized de novo in zebrafish (Danio rerio) from a pentose phosphate pathway intermediate, sedoheptulose 7-phosphate, by a 2-epi-5-epi-valiolone synthase (EEVS) and a methyltransferase-oxidoreductase (MT-Ox). The EEVS and MT-Ox genes are clustered with a suite of conserved transcription factor genes. Homologous gene clusters have been identified in the genomes of some other fish, amphibians, reptiles, and birds. Mammals do not have the EEVS and MT-Ox genes, but do have a homologous transcription factor gene cluster in their genomes. It has been postulated that these ancient genes were lost during the evolution of mammals circa 220 million years ago. The applicant's discovery revealed the molecular basis for gadusol formation in fish and other vertebrates.
[0258] Construction of LOC100003999 and ZGC:113054 Gene Expression Vectors
[0259] The LOC100003999 gene was codon optimized for Escherichia coli and synthesized commercially (GeneScript USA Inc.). The optimized gene was cloned into EcoRV site of pUC57-Kan vector. The plasmid was digested with BglII and EcoRI and ligated into BamHI and EcoRI site of pRSET-B (Invitrogen) for the expression of N-terminal hexa-histidine-tagged protein (hexa-histidine disclosed as SEQ ID NO: 90). The zgc:113054 gene was also codon optimized for E. coli and commercially synthesized (GeneScript USA Inc.). The optimized gene was cloned into EcoRV site of pUC57-amp vector. The plasmid was digested with Bgll and EcoRI and ligated into BamHI and EcoRI site of pRSET-B (Invitrogen) for the expression of N-terminal hexa-histidine-tagged protein (hexa-histidine disclosed as SEQ ID NO: 90).
[0260] Expression of VALA, LOC100003999 AND ZGC:113054 Genes in Escherichia coli
[0261] pRSETB-valA, pRSETB-LOC100003999 and pRSETB-zgc:113054 plasmids were individually used to transform E. coli BL21 GOLD (DE3) pLysS. Transformants were grown overnight at 37 C. on LB agar plate containing ampicillin (100 g/mL) and chloramphenicol (25 g/mL). A single colony was inoculated into LB medium (2 mL) containing the above antibiotics and cultured at 37 C. for 8 h. The seed culture (1 mL) was transferred into LB medium (100 mL) in a 500 mL flask and grown at 30 C. until OD600 reached 0.6. Then, the temperature was reduced to 18 C. After 1 h adaptation, isopropyl-D-1-thiogalactopyranoside (IPTG) (0.1 mM) was added to induce the N-terminal hexa-histidine-tagged proteins (hexa-histidine disclosed as SEQ ID NO: 90). After further growth for 16 h, the cells were harvested by centrifugation (5000 rpm, 10 min, 4 C.), washed twice with cold water and stored at 80 C. until used.
[0262] Purification of Recombinant VALA, LOC100003999 AND ZGC:113054
[0263] Cell pellets from a 400 ml culture of E. coli BL21 GOLD (DE3) pLysS containing pRSETB-valA, pRSETB-LOC100003999 or pRSETB-zgc:113054 plasmids was resuspended in 20 ml of B buffer (40 mM Tris-HCl, 300 mM NaCl, 10 mM imidazole, pH 7.5). Cells were disrupted by sonication for 1 min (4 times, 2 min interval) at 13 watts on ice (Probe sonicator, Misonix). Twenty mL of lysate was divided into 2 mL tubes and centrifuged (14,500 rpm, 20 min, 4 C.). Soluble fractions were collected and transferred into a 50 ml tube. Ni-NTA (QIAGEN) resin (5 mL) was applied into 10 ml volume empty column and the Ni-NTA resin was equilibrated with B buffer (50 ml, 10 CV). About 20 mL of supernatant from cell lysate was applied to the column (flow rate; 0.8 ml/min). The column was then washed with 100 ml (20 CV) of W buffer (40 mM Tris-HCl, 300 mM NaCl, 20 mM imidazole, pH 7.5) at 0.8 ml/min. The hexa-histidine-tagged proteins (hexa-histidine disclosed as SEQ ID NO: 90) were eluted by imidazole addition using a gradient mixer containing 100 ml of W buffer and 100 ml of E buffer (40 mM Tris-HCl, 300 mM NaCl, 300 mM imidazole, pH 7.5). The fractions (150 drops or about 5 mL) were collected and checked by SDS-PAGE (Coomassie Blue staining). Fractions containing pure proteins were combined (25 ml) and dialyzed against 2 L of D buffer (10 mM Tris-HCl, pH 7.5) 3 times (every 3 h). Dialyzed protein solution was concentrated by ultrafiltration (MWCO 10 K) to 200 M and flash frozen in liquid N2 prior to storage at 80 C.
[0264] LOC100003999 Assay Condition
[0265] Each reaction mixture (25 L) contained Tris-HCl buffer (20 mM, pH 7.5), NAD.sup.+ (1 mM), CoCl.sub.2 or ZnSO.sub.4 (0.1 mM), sedoheptulose 7-phosphate (4 mM), and enzymes (0.12 mM). The mixture was incubated at 30 C. for 2 h. ValA (instead of LOC100003999) was used as a positive control. No enzyme (buffer only) was used as a negative control.
[0266] Coupled LOC100003999 AND ZGC:113054 Assay Condition
[0267] Each reaction mixture (50 L) contained potassium phosphate buffer (10 mM, pH 7.4), NAD.sup.+ (2 mM), CoCl.sub.2 (0.2 mM), sedoheptulose 7-phosphate (4 mM), and LOC100003999 cell-free extracts (20 L) was incubated at 30 C. After 6 h, S-adenosylmethionine (5 mM) and zgc: 113054 cell-free extracts (30 L) were added. The mixture was incubated at 30 C. for another 6 h. ValA was used (instead of LOC100003999) as a positive control. Extract of E. coli harboring pRSET B empty vector was used as a negative control.
[0268] ZGC:113054 Assay Using [6,6-.sup.2H.sub.2]-EEV as Substrate
[0269] A reaction mixture (25 jL) containing potassium phosphate buffer (10 mM, pH 7.4), NAD.sup.+ (2 mM), CoCl.sub.2 (0.2 mM), S-adenosylmethionine (5 mM), [6,6-.sup.2H.sub.2]-EEV (4 mM), and zgc: 113054 cell-free extract (20 L) was incubated at 30 C. for 2 h. An extract of E. coli harboring pRSET B empty vector was used as a negative control.
[0270] TLC Analysis of EEV AND Gadusol
[0271] Analytical thin-layer chromatography (TLC) was performed using silica gel plates (60 ) with a fluorescent indicator (254 nm), which were visualized with a UV lamp and ceric ammonium molybdate (CAM) or 5% FeCl.sub.3 in MeOHH.sub.2O (1:1) solutions.
[0272] GC-MS Analysis of EEV
[0273] The enzymatic reaction mixtures were lyophilized and the products were extracted with MeOH. The MeOH extract was then dried and Tri-Sil HTP (Thermo Scientific) (100 gL) was added and left stand for 20 min. The solvent was removed in a flow of Argon gas and the silylated products were extracted with hexanes (100 jL) and injected into the GC-MS (Hewlett Packard 5890 SERIES II Gas chromatograph).
[0274] Enzymatic Synthesis, Purification, and Analysis of Gadusol
[0275] Fifty eppendorf tubes containing reaction mixtures (100 L each), which consist of potassium phosphate buffer (10 mM, pH 7.4), SH7P (5 mM), NAD.sup.+ (2 mM), CoCl.sub.2 (0.2 mM), and LOC100003999 cell-free extract (40 L) was incubated at 30 C. After 6 h, S-adenosylmethionine (5.5 mM) and zgc:113054 cell-free extracts (30 JAL) were added. The reaction mixtures were incubated at 30 C. for another 6 h. The reaction mixtures were quenched with 2 volumes of MeOH, held at 20 C. for 20 min, then centrifuged at 14,500 rpm for 20 min. The supernatants were pooled and dried under vacuum. The residual water was frozen and lyophilized. The crude sample was dissolved in water (1 mL) and subjected to Sephadex LH-20 column chromatography using phosphate buffer (2.5 mM, pH 7) as an eluent. Fractions containing the product as judged by MS were combined and lyophilized. Furthermore, the product was purified by HPLC [Shimadzu LC-20AD, C18 column (YMC), 25010 mm, 4 m, flow rate 1 mL/min]. Solvent system: MeOHphosphate buffer (5 mM, pH 7), gradient 1%-100% of MeOH (0-40 min). Peak at 12.74 min was collected and dried to give gadusol (0.4 mg). 1H NMR (700 MHz, D20, cryo-probe): 4.10 (s, 1H, H-4), 3.71 (d, J=12 Hz, H-7a), 3.56 (d, J=12 Hz, H-7), 3.49 (s, 3H, OCH.sub.3), 2.68 (d, J=17 Hz, H-6a), 2.38 (d, J=17 Hz, H-6J3). HR-MS (ESI-TOF) m/z 205.0709 (calculated for C.sub.8H.sub.13O.sub.6[M+H]+: 205.0707).
[0276] Zebrafish Lines and Embryos
[0277] Adult wild type 5D zebrafish were housed at the Sinnhuber Aquatic Research Laboratory on a recirculating system maintained at 281 C. with a 14 h light/10 h dark schedule. Embryos were collected from group spawns of adult zebrafish as described previousyl and all experiments were conducted with fertilized embryos. Embryos were staged and collected by hand for all experiments. Embryos were reared in media consisting of 15 mM NaCl, 0.5 mM KCl, 1 mM MgSO.sub.4, 0.15 mM KH.sub.2PO.sub.4, 0.05 mM Na.sub.2HPO.sub.4 and 0.7 mM NaHCO.sub.3.
[0278] Polymerase Chain Reaction (PCR)
[0279] All PCR reactions were performed according to manufacturer's specifications. Cycling conditions: 96 OC for 3 minutes, 95 C. for 1 minute, 65 C. for 1 minute, and 72 OC for 1 minute per kB DNA; 35 cycles were used followed by 10 minutes at 72 C. All PCR products were characterized on an agarose gel. If needed, the PCR product was excised from the gel and purified using the E.Z.N.A. Gel Extraction Kit from Omega Bio-tek.
[0280] Quantitative PCR of Zebrafish Samples
[0281] qPCR was performed on an Applied Biosystems StepOnePlus machine. The super mix PerfeCTa SYBR Green FastMix, ROX by Quanta biosciences was used. cDNA (100 ng) from time points at 6, 12, 24, 48, 72, 96, and 120 hpf were used. Super mix (18 L) were added to bring the final volume to 20 L. PCR conditions suggested by the supplier were used. For total RNA isolation, 30 embryos were homogenized in RNAzol (Molecular Research Center); RNA was purified according to the manufacturer's protocol. RNA was quantified by A260/280 ratios measured using a SynergyMx microplate reader (Biotek) and analyzed with the Gen5 Take3 module. One g of RNA was used for cDNA synthesis. Superscript III First-Strand Synthesis (Invitrogen) and oligo d(T) primers were used to synthesize cDNA from the total RNA.
[0282] Isolation of Gadusol from Zebrafish
[0283] Embryos were collected and euthanized at 72 hpf by induced hypoxia through rapid chilling on ice for 30 minutes. Embryo media was removed until about 5 mL were left and frozen at 80 C. Embryos were lyophilized overnight. The freeze-dried embryos were then ground with a pestle and mortar under liquid nitrogen. The powder was collected and placed in a pre-weighed glass vial. The mortar was washed with MeOHH.sub.2O (80:20) and the solvent was added to the powder. The solvent was evaporated and powder was weighed. The embryo powder was extracted twice with MeOHH.sub.2O (80:20). The two extracts were combined, dried, and weighed. The extract was suspended in MeOHH.sub.2O (80:20) (1 mL) and extracted twice with hexane. The aqueous layer was recovered, dried, and weighed. The extract was suspended in MeOH for analysis by mass spectrometry. The extract was dissolved in phosphate buffer pH 7.0 for identification by HPLC (Shimadzu SPD-20A system, YMC ODS-A column (4.6 id250 mm), MeOH5 mM phosphate buffer (1% MeOH for 20 min followed by a gradient from 1 to 95% MeOH in 20 min), flow rate 0.3 mL/min, 296 nm. The isolated gadusol was analyzed by MS (ThermoFinnigan LCQ Advantage system) and NMR [in D20; Bruker Unity 300 (300.15 MHz) spectrometer].
[0284] Yeast Strains, Media and Growth Conditions
[0285] The yeast strains used are listed in Table 8. For cases in which the yeast strain was newly generated to carry out the work described in this disclosure, the source is listed an N/A.
TABLE-US-00007 TABLE 8 Yeast strains used Strain Genotype Source S288c MAT SUC gal mal mel flo1 ATCC 204508, Manassas, flo8-1 hap bio1 bio6 VA BY4742 tal1 MAT his31 leu20 lys20 Thermo Fisher Scientific Inc., ura30 tal1::KanMX4 Waltham, MA BY4742 tal1trp1 MAT his31 leu20 lys20 N/A ura30 tall trp1::URA3 BY4742 tal1trp1rad1 MAT his31 leu20 lys20 N/A ura30 tal1 trp1::URA3 rad1::LEU2 BY4742 tal1trp1/ MAT his31 leu20 lys20 N/A pXP416 pXP420 ura30 tal1 trp1::URA3/ pXP416 pXP420 BY4742 tal1 MAT his31 leu20 lys20 N/A trp1/pXP416-MTOX ura30 tal1 pXP420-EEVS trp1::URA3/pXP416-EEVS pXP420-MTOX BY4742 tal1trp1rad1/ MAT his31 leu20 lys20 N/A pXP416 pXP420 ura30 tal1 trp1::URA3 rad1::LEU2/pXP416 pXP420
[0286] The TRP1 gene was replaced in BY4742 tal1::KanMX4 with a wild-type URA3 allele from S288c by standard methods. The deletion was confirmed by PCR using primer pairs TRP1DisUP/TRP1DisLO and URA3DisUP/TRP1DisLO. The BY4742 tal1::KanMX4 trp1::URA3 strain was then co-transformed5 with pXP416 and pXP420 to generate an empty vector control strain, and with pXP420-EEVS and pXP416-MT-Ox to generate a gadusol-producing strain. The EEVS and MT-Ox genes introduced into yeast were codon-optimized for expression in E. coli. The RAD1 gene was replaced in BY4742 tal1::KanMX4 trp1::URA3 with a wild-type LEU2 allele from S288c by standard methods. The deletion was confirmed by PCR using primer pairs RAD1UP/RAD1LO. The resultant BY4742 tal1::KanMX4 trp1::URA3 rad1::LEU2 strain was then co-transformed with pXP416 and pXP420. Cells were pre-grown in YEPD (1% yeast extract, 2% peptone, and 2% glucose) for transformations, and in YNB (Bacto yeast nitrogen base without amino acids)+2% glucose supplemented with 30 g/ml leucine and 30 g/ml lysine to select for transformants and to produce gadusol. Liquid media were sterilized by filtration using a 0.45 m filter and agar-based media were sterilized by autoclaving. Liquid cultures were grown at 30 C. for 48 h and 200 rpm; plates were incubated at 30 C.
[0287] Yeast Overexpression Plasmid Construction
[0288] Plasmids are listed in Table 11. Primers used for PCR are listed in Table 12. PCR amplicons with SpeI and XhoI terminal restriction sites were generated for the EEVS gene and MT-Ox gene using pRSETB-EEVS and pRSETB-MTOx as templates, respectively. The EEVS and MT-Ox amplicons were then digested with SpeI and XhoI and ligated into SpeI- and XhoI-digested pXP420 and pXP416, respectively, and introduced into competent E. coli (Top 10; Invitrogen) by transformation. E. coli transformants were selected on LB plates supplemented with ampicillin (100 g/ml). Transformants were then screened by digesting plasmid DNA with SpeI and XhoI restriction enzymes and analyzing fragments by agarose gel electrophoresis.
[0289] Identification of Gadusol Production in S. cerevisiae
[0290] S. cerevisiae cell pellets from 5 mL cultures were extracted with MeOH and the supernatant was extracted with nBuOH. Extracts were concentrated and analyzed by HPLC (Shimadzu SPD-20A system, YMC ODS-A column (4.6 id250 mm), MeOH5 mM phosphate buffer (1% MeOH for 20 min followed by a gradient from 1 to 95% MeOH in 20 min), flow rate 0.3 mL/min, 296 nm.
[0291] Irradiation Protocol
[0292] A rad1 mutant (MAT his31 leu20 lys20 trp1::URA3 ura30 rad1::LEU2 tal1:: KanMX4/pXP416, pXP420) or wild-type RAD1 strain (S288c, MAT SUC2 gal2 mal2 mel flo1 flo8-1 hap1 ho bio1 bio6) was grown at 30 C. and 200 rpm in YNB+2% glucose+30 g/mL leu+30 g/mL lys. Cells were harvested after 24 h by centrifugation, washed twice in the 9-fold concentrated supernatant of either the gadusol-producing strain BY4742 tal1 trp A/pXP416-MTOx, pXP420-EEVS or of the control strain BY4742 tal1 trp1/pXP416, pXP420, and suspended in the respective supernatants at 10.sup.7 cells/mL. Cells (375 L) were irradiated with UVB (302 nm) at the indicated doses in wells of a 24-well microtiter plate shaken at 900 rpm. Three L aliquots of cells were then spotted onto a YEPD plate which was incubated 24 h at 30 C. prior to being photographed. The supernatants of the gadusol-producing and control strains were obtained by centrifugation following 5 days of growth in YNB+2% glucose+30 g/mL leucine+30 g/mL lysine at 30 C. and 200 rpm. Supernatants were freeze-dried, dissolved in a volume of distilled water 1/10 of the initial culture volume, and stored at 4 C. until use. Just prior to suspension of cells, the concentrated supernatant was adjusted to 50 mM phosphate, pH 7.0 resulting in a final 9-fold concentrate.
[0293] Sugar Phosphate Cyclases
[0294] Table 9 lists Sugar Phosphate Cyclases, including EEVS proteins.
TABLE-US-00008 TABLE 9 Sugar Phosphate Cyclases Family Protein Accession No. Organism Bacterial AcbC AEV84575.1 Actinoplanes sp. SE50/110 EEVS EEVS WP_005152974.1 Amycolatopsis azurea DSM 43854 EEVS WP_020673085 Amycolatopsis nigrescens EEVS WP_006999601.1 Candidatus Burkholderia kirkii EEVS CCD36718 Candidatus Burkholderia kirkii UZHbot1 Cja_3250 ACE84801.1 Cellvibrio japonicus Ueda107 CLD_3207 ACA45465.1 Clostridium botulinum B1 str. Okra Cpap_0968 EGD46588.1 Clostridium papyrosolvens DSM 2782 D187_002969 EPX59479.1 Cystobacter fuscus DSM 2262 AcbC CBL44970.1 gamma proteobacterium HdN1 EEVS WP_007320675.1 Gordania araii NBRC 100433 MESS4_430082 CCV12436.1 Mesorhizobium sp. STM 4661 EEVS WP_020731587.1 Mycobacterium marinum AroB_1 ACC39042.1 Mycobacterium marinum M EEVS WP_020727917.1 Mycobacterium marinum MB2 MMEU_4200 EPQ72818.1 Mycobacterium marinum str. Europe EEVS WP_019045670 Nocardia asteroides NS07 CONTIG 00143-0015 GAF31941.1 Nocardia seriolae N-2927 PrlA ABL74380.1 Nonomuraea spiralis EEVS WP_023102627.1 Pseudomonas aeruginosa PflA506_4591 AFJ55097.1 Pseudomonas fluorescens A506 EEVS WP_019817993.1 Pseudomonas sp. CFT9 UUC_15323 EIL99898.1 Rhodanobacter denitrificans EEVS WP_008438647.1 Rhodanobacter thiooxydans UUA_15933 EIL97123.1 Rhodanobacter thiooxydans LCS2 EEVS WP_020113256.1 Rhodococcus 114MFTsu3.1 EEVS WP_019667777.1 Rhodococcus 29MFTsu3.1 EEVS WP_021331771 Rhodococcus erythropolis O5Y_25890 AGT94995.1 Rhodococcus erythropolis CCM2595 N601_00990 EQM35423.1 Rhodococcus erythropolis DN1 RER_54360 BAH36144.1 Rhodococcus erythropolis PR4 EEVS WP_021345782 Rhodococcus sp. P27 EEVS YP_007039401.1 Saccharothrix espanaensis DSM 44229 Staur_1386 ADO69190.1 Stigmatella aurantiaca DW4/3-1 EEVS WP_010359798.1 Streptomyces acidiscabies 84-104 SalQ ABV57470.1 Streptomyces albus EEVS WP_006603459.1 Streptomyces auratus SU9_09459 EJJ07289.1 Streptomyces auratus AGR0001 EEVS WP_005477027.1 Streptomyces bottropensis ATCC 25435 EEVS WP_010034415.1 Streptomyces chartreusis SSCG_00526 EDY47498.1 Streptomyces clavuligerus ATCC 27064 SMCF_997 EHN79464.1 Streptomyces coelicoflavus ZG0656 GacC CAL64849.1 Streptomyces glaucescens GLA.O VldA ABC67267.1 Streptomyces hygroscopicus subsp. limoneus EEVS AAZ91667.1 Streptomyces hygroscopicus subsp. yingchengensis EEVS WP_009076280.1 Streptomyces sp. AA4 EEVS WP_018894817.1 Streptomyces sp. CNY228 EEVS AGZ94062.1 Streptomyces sp. MMG1533 EEVS WP_010644135.1 Streptomyces sp. S4 EEVS WP_007385523.1 Streptomyces sviceus SSEG_08792 EDY55324.2 Streptomyces sviceus ATCC 29083 AciPR4_1231 ADV82056 Terriglobus saanensis SP1PR4 Animal LOC101799904 XP_005011275.1 Anas platyrhynchos EEVS LOC100554413 XP_003217873.2 Anolis carolinensis LOC103021483 XP_007241787.1 Astyanax mexicanus UY3_08628 EMP34204.1 Chelonia mydas LOC101935311 XP_005282175.1 Chrysemys picta bellii A306_01079 EMC89871.1 Columba livia LOC100003999 XP_001343422.1 Danio rerio DLA_It04010 CBN80976.1 Dicentrarchus labrax LOC102050204 XP_005432702.1 Falco cherrug LOC101920037 XP_005230087.1 Falco peregrinus LOC101811082 XP_005053423.1 Ficedula albicollis ENSGMOG00000007414.1 ENSGMOG00000007414 Gadus morhua LOC427594 XP_425167.2 Gallus gallus ENSGACG00000011871 ENSGACP00000015700 Gasterosteus aculeatus LOC102035384 XP_005420282.1 Geospiza fortis LOC102309185 XP_005947633.1 Haplochromis burtoni LOC102684922 XP_006630707.1 Lepisosteus oculatus LOC101474077 XP_004567457.1 Maylandia zebra LOC100539368 XP_003210235.1 Meleagris gallopavo LOC101868264 XP_005149534.1 Melopsittacus undulatus LOC102782305 XP_006784803.1 Neolamprologus brichardi GSONMT00065608001 CDQ61676.1 Oncorhynchus mykiss LOC100690451 XP_003442831.1 Oreochromis niloticus LOC101163482 XP_004068647.1 Oryzias latipes LOC102457108 XP_006120116.1 Pelodiscus sinensis LOC103129387 XP_007540516.1 Poecilia formosa LOC102106679 XP_005522289.1 Pseudopodoces humilis LOC102205679 XP_005726665.1 Pundamilia nyererei LOC100223651 XP_002188776.1 Taeniopygia guttata LOC100492806 XP_002940521.1 Xenopus (Silurana) tropicalis LOC102222998 XP_005815791.1 Xiphophorus maculatus Stramenopile CYME_CMP183C XP_005537849 Cyanidioschyzon merolae strain 10D EEVS Esi_0086_0074 CBJ27882 Ectocarpus siliculosus THAOC_37874 EJK43661 Thalassiosira oceanica PHATRDRAFT87_72 XP_002177202 Phaeodactylum tricornutum HAPSDRAFT_21539 XP002287560 Thalassiosira pseudonana CHC_T00009338001 XP005713525 Chondrus crispus Gasu_30570 XP_005706140 Galdieria sulphuraria EVS Amir_2000 ACU35948.1 Actinosynnema mirum DSM 43827 Staur_3140 ADO70932.1 Stigmatella aurantiaca DW4/3-1 DHQS WP_002620792.1 Cystobacter fuscus DHQS WP_02806414.1 Solirubrobacter soli DHQS WP_015800837.1 Actinosynnema mirum DHQS WP_014443330.1 Actinoplanes missouriensis DHQS WP_019435820 Streptomyces sp. AA0539 KF386858.1 AGZ15443 Streptomyces sp. MK498-98F14 DHQS WP_02550010 Streptomyces scabrisporus Archaeal WP_013776014 WP_013776014.1 Acidianus hospitalis DHQS WP_015231795 WP_015231795.1 Caldisphaera lagunensis DHQS WP_012185860.1 Caldivirga maquilingensis CM19_06260 EZQ06961.1 Candidatus acidianus copahuensis DHQS WP_011998054.1 Ignicoccus hospitalis DHQS WP_013304180.1 Ignisphaera aggregans DHQS WP_013737014.1 Metallosphaera cuprina DHQS WP_012021802.1 Metallosphaera sedula DHQS WP_009075654.1 Metallosphaera yellowstonensis DHQS WP_011901560.1 Pyrobaculum arsenaticum DHQS WP_011849579.1 Pyrobaculum calidifontis ASUL_02139 EWG07805.1 Sulfolobales archaeon AZ1 DHQS WP_012711772.1 Sulfolobus islandicus DHQS WP_009990597.1 Sulfolobus solfataricus DHQS WP_010980356.1 Sulfolobus tokodaii DHQS WP_014127627.1 Thermoproteus tenax DHQS WP_013335353.1 Vulcanisaeta distributa DHQS WP_013604797.1 Vulcanisaeta moutnovskia Bacterial DHQS WP_018087611 Streptomyces sp. FxanaC1 and fungal Amir_5253**** ACU39074.1 Actinosynnema mirum DSM 43827 DHQS Ava_4386 ABA23984.1 Anabaena variabilis ATCC 29413 An1DQS 1DQS_A Aspergillus nidulans BsDHQS AAA20860.1 Bacillus subtilis DHQS CDH47441 Candidatus Contendobacter odensis EcDHQS AAA58186.1 Escherichia coli str. K-12 Hp3CLH 3CLH_A Helicobacter pylori DHQS WP_020681978 Marinobacterium rhizophilum DHQS WP_009725480 Methylophaga lonarensis DHQS WP_008290485 Methylophaga thiooxydans MtDHQS CAB06200.1 Mycobacterium tuberculosis H37Rv Npun_5729 ACC84029.1 Nostoc punctiforme PCC 73102 (ATCC 29133) DHQS WP_023970131 Pseudomonas chlororaphis DHQS WP_015479237 Pseudomonas denitrificans PKB_5345 CDF86657 Pseudomonas knackmussii B13 DHQS WP_016712492 Pseudomonas monteilii AU05_25215 EZH77367 Pseudomonas pseudoalcaligenes AD6 Sa1XAG 1XAG_A Staphylococcus aureus Staur_4041**** ADO71827.1 Stigmatella aurantiaca DW4/3-1 P354_02295 EXU86293 Streptomyces albulus DHQS WP_0066074643 Streptomyces auratus DHQS WP_014157372 Streptomyces flavogriseus DHQS WP_004942390 Streptomyces mobaraensis DHQS WP_005319844 Streptomyces pristinaespiralis ATCC_25486 DHQS WP_019884829 Streptomyces purpureus DHQS WP_003984693 Streptomyces rimosus DHQS WP_026249565 Streptomyces sp. ATexAB-D23 DHQS WP_026359219 Streptomyces sp. DvalAA-83 DHQS WP_016467710 Streptomyces sp. HPH0547 DHQS WP_018087611 Streptomyces sp. FxanaC1 DHQS WP_018539828 Streptomyces sp. MspMP-M5 DHQS WP_014044818 Streptomyces sp. SirexAA-E Tt1UJN 1UJN_A Thermus thermophilus HB8 DHQS WP_012639562 Thioalkalivibrio sulfidophilus DHQS WP_026186219 Thioalkalivibrio thiocyanodenitrzficans Plant and DHQS 3ZOK_A Actinidia chinensis algal AT5G66120 NP_56029 Arabidopsis thaliana DHQS LOC100834750 XP_003578532 Brachypodium distachyon CARUB_v10026413mg XP_006280477 Capsella rubella CISIN_1g013271mg KDO171284 Citrus sinensis COCSUDRAFT_35806 XP_005649993 Coccomyxa subellipsoidea C-169 EUGRSUZ_J02467 KCW53191 Eucalyptus grandis EUTSA_v10004219mg XP_00639797 Eutrema salsugineum L484_026650 EXC35326 Morus notabilis LOC102714768 XP_006661484 Oryza brachyantha Os09g0539100 NP_001063802 Oryza sativa Japonica EF678425.1 ABR18182 Picea sitchensis LOC101782627 XP_004957492 Setaria italica LOC 102598775 XP_006340763 Solanum tuberosum BT043106.1 ACF88111 Zea mays DDGS PDE_00008 WP_018334610.1 Actinomycetospora chiangmaiensis Amir_4259 ACU38114.1 Actinosynnema mirum DSM 43827 Ava_3858 ABA23463.1 Anabaena variabilis ATCC 29413 DDGS BAO51913.1 Aphanothece halophytica ACLA_055850 EAW13537.1 Aspergillus clavatus NRRL 1 ANIA_06403.2 CBF69538.1 Aspergillus nidulans FGSC A4 BAUCODRAFT_80557 EMC91075.1 Baudoinia compniacensis UAMH 10762 BBA_00472 EJP70842.1 Beauveria bassiana ARSEF 2860 COCC4DRAFT_167163 ENI05767.1 Bipolaris maydis ATCC 48331 COCHEDRAFT_1194844 EMD91152.1 Bipolaris maydis C5 COCMIDRAFT_8170 EUC42205.1 Bipolaris oryzae ATCC 44560 COCSADRAFT_38955 EMD62170.1 Bipolaris sorokiniana ND90Pr COCV1DRAFT_15921 EUN27206.1 Bipolaris victoriae FI3 BC1G_03060 XP_001558028.1 Botryotinia fuckeliana B05.10 BcDW1_9470 EMR81915.1 Botryotinia fuckeliana BcDW1 BofuT4_P133930.1 CCD53839.1 Botryotinia fuckeliana T4 DDGS AFZ02505 Calothrix sp. PCC 6303 DDGS WP_019490229.1 Calothrix sp. PCC 7103 DDGS 1 WP_019490229.1 Calothrix sp. PCC 7103 DDGS 2 WP_019491244.1 Calothrix sp. PCC 7103 A1O1_01840 EXJ93448.1 Capronia coronata CBS 617.96 DDGS WP_015160001.1 Chamaesiphon minutus Cha6605_2820 AFY93856.1 Chamaesiphon minutus PCC 6605 DDGS WP_016876765.1 Chlorogloeopsis Chro_0778 AFY86324.1 Chroococcidiopsis thermalis PCC 7203 G647_03988 ETI24619.1 Cladophialophora carrionii CBS 160.54 A1O5_01012 EXJ76504.1 Cladophialophora psammophila CBS 110553 A1O7_04691 EXJ60538.1 Cladophialophora yegresii CBS 114405 CPUR_02718 CCE29027.1 Claviceps purpurea 20.1 CFIO01_11686 EXF78170.1 Colletotrichum fioriniae PJ7 CGLO_11575 EQB49116.1 Colletotrichum gloeosporioides Cg-14 CGGC5_4437 XP_007274966.1 Colletotrichum gloeosporioides Nara gc5 GLRG_05915 EFQ30771.1 Colletotrichum graminicola M1.001 Cob_10738 ENH80676.1 Colletotrichum orbiculare MAFF 240422 W97_04284 EON65049.1 Coniosporium apollinis CBS 100218 CCM_06613 EGX90194.1 Cordyceps militaris CM01 Cri9333_2379 AFZ13246.1 Crinalium epipsammum PCC 9333 DDGS YP_002380202.1 Cyanothece sp. PCC 7424 Cylst_1339 AFZ23628.1 Cylindrospermum stagnale PCC 7417 HMPREF1541_10826 ETN43961.1 Cyphellophora europaea CBS 101466 DACRYDRAFT_108509 EJU01177.1 Dacryopinax sp. DJM-73I SSI DDGS WP_015229181 Dactylococcopsis sauna DOTSEDRAFT_74971 EME40344.1 Dothistroma septosporum NZE10 EPUS_06787 ERF68371.1 Endocarpon pusillum Z07020 HMPREF1120_03313 EHY55163.1 Exophiala dermatitidis NIH/UT8656 DDGS WP_016867391.1 Fischerella muscicola FFUJ_02302 CCT65366.1 Fusarium fufikuroi IMI 58289 FGSG_07578.1 ESU13851.1 Fusarium graminearum PH-1 FOPG_14554 EXL69517.1 Fusarium oxysporum f. sp. conglutinans race 2 54008 FOC1_g10007978 ENH63840.1 Fusarium oxysporum f. sp. cubense race 1 FOC4_g10004309 EMT72824.1 Fusarium oxysporum f. sp. cubense race 4 FOWG_01820 EWZ97333.1 Fusarium oxysporum f. sp. lycopersici MN25 FOMG_05909 EXK43277.1 Fusarium oxysporum f. sp. melonis 26406 FOVG_03599 EXA51127.1 Fusarium oxysporum f. sp. pisi HDV247 FOCG_01565 EXL63199.1 Fusarium oxysporum f. sp. radicis-lycopersici 26381 FOQG_12197 EXK83496.1 Fusarium oxysporum f. sp. raphani 54005 FOTG_14331 EXM17492.1 Fusarium oxysporum f. sp. vasinfectum 25433 FOZG_06058 EWZ45846.1 Fusarium oxysporum Fo47 FOXB_11899 EGU77611.1 Fusarium oxysporum Fo5176 FOYG_03768 EWY99830.1 Fusarium oxysporum FOSC 3-a FPSE_08031 EKJ71763.1 Fusarium pseudograminearum CS3096 FVEG_12691 EWG54478.1 Fusarium verticillioides 7600 M7I_2461 EHL01576.1 Glarea lozoyensis 74030 GLAREA_08216 EPE24364.1 Glarea lozoyensis ATCC 20868 GLOTRDRAFT_39501 XP_007864776.1 Gloeophyllum trabeum ATCC 11539 DDGS WP_023072000 Leptolyngbya sp. Heron Island J DDGS WP_006516570 Leptolyngbya sp. PCC 7375 LEMA_P063060.1 CBX90180.1 Leptosphaeria maculans JN3 DDGS WP_023068561.1 Lyngbya aestuarii L8106_16364 EAW37588.1 Lyngbya sp. PCC 8106 MPH_07850 EKG14950.1 Macrophomina phaseolina MS6 MGG_00016 EHA49547.1 Magnaporthe oryzae 70-15 OOU_Y34scaffold01060g1 ELQ32736.1 Magnaporthe oryzae Y34 MBM_04236 EKD17375.1 Marssonina brunnea f. sp. multigermtubi MB_m1 MELLADRAFT_46120 XP_007418557.1 Melampsora larici-populina 98AG31 MAC_00588 EFY93350.1 Metarhizium acridum CQMa 102 FVEG_12691 WP_017655453.1 Microchaete sp. PCC 7126 DDGS WP_002794106.1 Microcystis aeruginosa C789_465 ELS49746.1 Microcystis aeruginosa DIANCHI905 IPF_3031 CAO90104.1 Microcystis aeruginosa PCC 7806 acbC CCI02410.1 Microcystis aeruginosa PCC 9443 acbC CCH99802.1 Microcystis aeruginosa PCC 9717 acbC CCI19960.1 Microcystis aeruginosa PCC 9807 MICAG_2780005 CCI25385.1 Microcystis aeruginosa PCC 9808 E5Q_03910 GAA97234.1 Mixia osmundae IAM 14324 DDGS WP_014813469.1 Mycobacterium chubuense DDGS AFM14977.1 Mycobacterium chubuense NBB4 NECHADRAFT_48307 XP_003043726.1 Nectria haematococca mpVI 77-13-4 UCRNP2_5834 EOD47414.1 Neofusicoccum parvum UCRNP2 N9414_08103 EAW44170.1 Nodularia spumigena CCY9414 DDGS WP_006197691.1 Nodularia spumigena Npun_R5600 ACC83905.1 Nostoc punctiforme PCC 73102 Nos7524_3370 AFY49165.1 Nostoc sp. PCC 7524 OCS_06803 EQK97484.1 Ophiocordyceps sinensis CO18 Osc7112_3782 AFZ08125.1 Oscillatoria nigro-viridis PCC 7112 PDE_00008 EPS25077.1 Penicillium oxalicum 114-2 PFICI_12759 ETS75815.1 Pestalotiopsis fici W106-1 DDGS WP_019504239 Pleurocapsa sp. PCC 7319 MYCFIDRAFT_33875 XP007931255.1 Pseudocercospora fijiensis CIRAD86 DDGS WP_010243321.1 Pseudonocardia sp. P1 PaG_02576 ETS62823 Pseudozyma aphidis DSM 70725 PFL1_03740 EPQ28940.1 Pseudozyma flocculosa PF-1 PTT_06860 EFQ95201.1 Pyrenophora teres f. teres 0-1 PTRG_02787 EDU45310.1 Pyrenophora tritici-repentis Pt-1C-BFP PCON_03344 CCX16645 Pyronema omphalodes CBS 100304 DDGS WP_020111281.1 Rhodococcus sp. 114MFTsu3.1 DDGS WP_019663384.1 Rhodococcus sp. 29MFTsu3.1 DDGS WP_008719709.1 Rhodococcus sp. AW25M09 DDGS YP_007053294.1 Rivularia sp. PCC 7116 DDGS WP_022606420 Rubidibacter lacunae SBOR_4234 ESZ95378.1 Sclerotinia borealis F-4157 SS1G_08336 EDN92473.1 Sclerotinia sclerotiorum 1980 UF-70 DDGS WP_017743132.1 Scytonema hofmanni SETTUDRAFT_100700 EOA81028.1 Setosphaeria turcica Et28A SEPMUDRAFT_151827 EMF08929.1 Sphaerulina musiva SO2202 sr12669 CBQ71813.1 Sporisorium reilianum SRZ2 DDGS YP_007132170.1 Stanieria cyanosphaera PCC 7437 STEHIDRAFT_146260 EIM88185.1 Stereum hirsutum FP-91666 SS1 UCRPA7_3232 EOO01292.1 Togninia minima UCRPA7 UHOR_02376 CCF53523.1 Ustilago hordei VDBG_08620 EEY22510.1 Verticillium alfalfae VaMs.102 VDAG_08289 EGY17125.1 Verticillium dahliae VdLs.17 DDGS WP_006509782 Xenococcus sp. PCC 7305 MYCGRDRAFT_76728 XP_003848682.1 Zymoseptoria tritici IPO323 DHQS-like Npun_5231*** ACC83559.1 Nostoc punctiforme PCC 73102 (ATCC 29133) Npun_1267*** ACC79988.1 Nostoc punctiforme PCC 73102 (ATCC 29133) aDHQS Amir_3296***** ACU37202.1 Actinosynnema mirum DSM 43827 Asm47 AAC14006.1 Actinosynnema pretiosum subsp. auranticum GdmO AAO06928.1 Streptomyces hygroscopicus MitP AAD28456.1 Streptomyces lavendulae RifG AAC01717.1 Amycolatopsis mediterranei S699 DOIS TbmA CAE22471.1 Streptoalloteichus tenebrarius KanA BAD20759.1 Streptomyces kanamyceticus RbmA CAG34037.1 Streptomyces ribosidificus NemA BAD95820.1 Streptornyces fradiae GntB AAR98548.1 Micromonospora echinospora BtrC BAA83344.1 Bacillus circulans
[0295] MT-OX Proteins
[0296] Table 10 provides examples of MT-Ox proteins and lists a gene symbol, accession number, and source organism for each protein.
TABLE-US-00009 TABLE 3 MT-Ox proteins Family Gene symbol Accession No. Organism MT-Ox LOC102560707 XP_006270840.1 Alligator mississippiensis LOC101799721 XP_005011274 Anas platyrhynchos LOC100554218 XP_008103594 Anolis carolinensis LOC103021811 XP_007241788.1 2 Astyanax mexicanus LOC101935589 XP_005282176.1 Chrysemys picta bellii LOC102090989 XP_005514955.1 Columba livia zgc:113054 NP_001013468.1 Danio rerio DLA_It04000 CBN80975.1 Dicentrarchus labrax LOC102050380 XP_005432703 Falco cherrug LOC101919857 XP_005230086 Falco peregrinus LOC101811274 XP_005053424 Ficedula albicollis ENSGMOG00000007404 ENSGMOP00000007916 Gadus morhua LOC427595 XP_425168.3 Gallus gallus ENSGACG00000011845 ENSGACP00000015696 Gasterosteus aculeatus LOC102035220 XP_005420281.1 Geospiza fortis LOC102308870 XP_005943916 Haplochromis burtoni LOC102695979 XP_006630675.1 Lepisosteus oculatus LOC101474366 XP_004567458.1 Maylandia zebra LOC100539521 XP_003210236 Meleagris gallopavo LOC101868426 XP_005149535 Melopsittacus undulatus LOC102782600 XP_006784804.1 Neolamprologus brichardi GSONMT00065609001 CDQ61677.1 Oncorhynchus mykiss LOC100697673 XP_005450406.1 Oreochromis niloticus LOC101163242 XP_004068646.1 Oryzias latipes LOC102457357 XP_006120117.1 Pelodiscus sinensis LOC103129385 XP_007540514.1 Poecilia formosa LOC102106494 XP_005522288 Pseudopodoces humilis LOC102205957 XP_005726666.1 Pundamilia nyererei LOC100220728 XP_002188799 Taeniopygia guttata MGC147226 NP_001072630 Xenopus (Silttrana) tropicalis LOC102222561 XP_005814009.1 Xiphophorus maculatus LOC102064640 XP_005491459 Zonotrichia albicollis
[0297] Primers
[0298] Table 11 lists primers useful in making or using the various embodiments of the disclosure disclosed herein. The function for each primer is also disclosed.
TABLE-US-00010 TABLE11 Primersused SEQ ID NO. Primer Sequence(5.fwdarw.3).sup.a Function 23 TRP1DisURA3UP TATAGGAAGCATTTAATAGAACAGCATCGTA TRP1 ATATATGTGTACTTTGAGTTATGACGCCGAA deletion ATTGAGGCTACTGCGCC 24 TRP1DisURA3LO CCTGTGAACATTCTCTTCAACAAGTTTGATT TRP1 CCATTGCGGTGAAATGGTAAAAGTCAACCGG deletion CAGCGTTTTGTTCTTGGA 25 RAD1DisLEU2UP GAGCATTTGCTAAATGTGTAAAAATAATATT RAD1 GCACTATCCTGTTGAAAATATCTTTCCAGCA deletion CTGTTCACGTCGCACCTA 26 RAD1DisLEU2LO CTATAGTTAATCGCATTTTATACTGATGTTT RAD1 TAACAGGGTTCGTTAAATTAAACAATATTGC deletion TGCATTAATGAATCGGCCA 27 TRP1DisUP CTCACCCGCACGGCAGAGAC Confirmation 28 TRP1DisLO TGCCGGCGGTTGTTTGCAAG Confirmation 29 URA3DisUp GTGGCTGTGGTTTCAGGGTCCA Confirmation 30 RAD1UP CCTGAAGTGTTCTCTGTTTGCC Confirmation 31 RAD1LO GCTCAGATTCCACCAAATACGG Confirmation 32 DEEVSUP AGATCCACTAGTATGGAACGTCCGGGCGAAA EEVS C cloning 33 DEEVSLO TAGCCACTCGAGTCACTGCGGTGAGCCGGT EEVS cloning 34 MTOXUP AGATCCACTAGTATGCAAACGGCAAAAGTCT MTOX C cloning 35 MTOXLO TAGCCACTCGAGTCACCACAGAGACTGACCG MTOX cloning 36 DEEVS-q-F CCATCTGTTCACCGGGACAA qPCREEVS 37 DEEVS-q-R TGCTGGGGTCAAGAAGGTTT qPCREEVS 38 MTOX-q-F AGTAGAGCAGGTCATCATCCCT qPCR MTOX 39 MTOX-q-R CTATGATGGCGACTTTGGCTC qPCR MTOX .sup.aSpeI and XhoI restriction sites are underlined
[0299] Plasmids
[0300] Table 12 lists plasmids that may be useful in making or using the various embodiments of the disclosure disclosed herein. The source of each plasmid is listed. For cases in which the plasmid was newly generated to carry out the work described in this disclosure, the source is listed an N/A.
TABLE-US-00011 TABLE 12 Plasmids used Plasmid Insert Source/reference pUC57-EEVS EEVS (EcoRV) GeneScript USA Inc. pUC57-MTOX MT-Ox (EcoRV ) GeneScript USA Inc. pRSETB-EEVS EEVS (Bg/II) This study pRSETB-MTOX MT-Ox (Bg/II) This study pXP416 none Fang et al. 2011.sup.1; Addgene, Cambridge, MA pXP416-MTOX MT-OX (SpeI/XhoI) This study pXP20 none Fang et al. 2011.sup.1; Addgene, Cambridge, MA pXP420-EEVS EEVS (SpeI/XhoI) This study
Sequences
[0301] DNA sequences of EEVS and MT-Ox genes, and vectors pUC57-Kan, pRSET-B, pXP416, pXP420.
TABLE-US-00012 DaniorerioEEVScDNA(accessionno.LOC100003999) SEQIDNO.1 atggagcgacccggggagacatttacagtgagttcacctgaagaagttcg cctgccatctgttcaccgggacaactcgacgatggagaaccacaacaagc aggagactgtcttcagcctggtgcaggtgaaggggacgtggaaacgcaaa gcagggcaaaatgccaagcaaggaatgaaaggacgagtttcaccggctaa aatttacgaaagcagctcctctagtggcactacctggacagtggtcaccc ccatcaccttcacatatactgttactcagaccaaaaaccttcttgacccc agcaatgacactctgcttttgggccacatcattgacactcagcagcttga ggccgtacggtccaacaccaaacccttaaaacgcttcatagtcatggatg aggtagtgtacaatatctatggttctcaggtcaccgaatacctcgaggcc agaaatgtcctgtaccggatcctgcccctgcccacgacagaggagaacaa gtccatggatatggccctgaagatcctggaggaggtgcaccagtttggga tcgaccggcgcacggagcccattatcgccattggagggggcgtctgcctg gatatcgtgggtctggcggcgtcgctttacagaagacgcactccatacat tcgtgttcccaccactctactgtcctacattgacgccagtgtcggagcca aaacaggtgtcaatttcgccaattgtaagaacaaacttggcacctacatc gcacctgttgctgcattcctggaccggtcgtttatacagagcattcctcg caggcacatagctaacggtcttgcagaaatgctgaagatggctcttatga agcacagagggctgtttgaactcctggaagtgcacggacagttcctctta gactccaagttccagtctgcttcagtcctagagaacgaccgcattgaccc tgcttctgtctctacacgtgtcgcaatagaaaccatgctagaagagttag ccccaaacctgtgggaggatgatcttgacagactggttgactttgggcac ctcataagccctcaactagagatgaaagtcctaccagctcttctccacgg tgaagcggtgaatattgatatggcctacatggtgtatgtgtcttgtgaaa ttggattgctgacagaggaggagaaattcaggatcatctgttgcatgatg ggactggagctgccggtgtggcatcaagacttcacatttgctttggtgca gaagtctctgtgtgacagacttcagcattctggaggcctcgtgagaatgc ctttaccaacaggcctcggaagagcagaaatcttcaatgacactgatgaa ggctctctgtttagggcgtacgagaagtggtgtgatgagctcagcactgg gtcacctcaa EEVSoptimizedforE.coli SEQIDNO.2 ATGGAACGTCCGGGCGAAACCTTTACCGTCAGCTCCCCGGAAGAAGTGCG TCTGCCGTCTGTTCACCGCGATAACTCAACGATGGAAAACCATAATAAAC AGGAAACGGTGTTTTCTCTGGTTCAAGTCAAGGGTACCTGGAAGCGTAAG GCGGGCCAGAACGCCAAACAGGGTATGAAGGGCCGCGTTAGTCCGGCCAA AATTTATGAAAGCTCTAGTTCCTCAGGTACCACGTGGACGGTGGTTACCC CGATCACCTTTACGTACACCGTGACGCAGACCAAAAACCTGCTGGACCCG TCGAACGACACGCTGCTGCTGGGCCATATTATCGATACCCAGCAACTGGA AGCTGTCCGCAGCAATACGAAACCGCTGAAGCGTTTCATTGTGATGGACG AAGTCGTGTATAATATCTACGGTTCCCAAGTCACCGAATATCTGGAAGCG CGCAACGTGCTGTACCGTATTCTGCCGCTGCCGACCACGGAAGAAAATAA ATCAATGGATATGGCTCTGAAGATTCTGGAAGAAGTGCACCAGTTTGGTA TCGACCGTCGCACCGAACCGATTATCGCGATTGGCGGTGGCGTTTGCCTG GATATCGTCGGTCTGGCAGCCTCTCTGTATCGTCGCCGTACCCCGTACAT TCGTGTGCCGACCACGCTGCTGTCTTATATCGACGCAAGTGTGGGTGCTA AAACGGGCGTTAACTTTGCTAATTGTAAAAACAAGCTGGGTACCTACATT GCGCCGGTTGCAGCTTTTCTGGATCGTTCGTTCATTCAGAGCATCCCGCG CCGTCACATCGCAAACGGTCTGGCCGAAATGCTGAAAATGGCCCTGATGA AGCATCGCGGTCTGTTCGAACTGCTGGAAGTTCACGGCCAGTTTCTGCTG GATAGTAAATTCCAATCGGCAAGCGTCCTGGAAAACGATCGCATTGACCC GGCCTCTGTCAGTACGCGTGTGGCAATCGAAACCATGCTGGAAGAACTGG CCCCGAATCTGTGGGAAGATGACCTGGATCGTCTGGTGGACTTTGGTCAT CTGATTTCGCCGCAGCTGGAAATGAAAGTTCTGCCGGCACTGCTGCACGG CGAAGCTGTCAACATTGATATGGCGTATATGGTGTACGTTTCATGCGAAA TCGGTCTGCTGACCGAAGAAGAAAAATTCCGCATTATCTGCTGTATGATG GGCCTGGAACTGCCGGTGTGGCATCAGGATTTTACCTTCGCACTGGTTCA AAAGTCCCTGTGTGACCGCCTGCAGCACTCAGGTGGCCTGGTTCGTATGC CGCTGCCGACGGGTCTGGGTCGTGCAGAAATTTTTAATGATACCGACGAA GGTAGCCTGTTCCGCGCGTATGAAAAATGGTGCGATGAACTGTCCACCGG CTCACCGCAG S.cerevisiae-optimizedEEVSsequence#1 SEQIDNO.3 ATGGAAAGACCAGGTGAAACTTTCACCGTCTCCTCTCCAGAAGAAGTCAG ATTACCTTCCGTCCACAGAGATAATTCTACCATGGAAAACCACAACAAGC AAGAAACCGTTTTCTCTTTGGTCCAAGTTAAGGGTACTTGGAAGCGTAAG GCTGGTCAAAACGCTAAGCAAGGTATGAAAGGTAGAGTTTCTCCAGCTAA GATTTATGAATCCTCTTCCTCTTCCGGTACCACCTGGACCGTCGTTACTC CAATTACCTTCACTTACACTGTTACCCAAACCAAAAACTTGTTGGATCCA TCTAACGACACTTTGTTGTTGGGTCATATCATCGATACCCAACAATTGGA GGCTGTTAGATCTAACACCAAGCCTTTGAAGCGTTTCATTGTCATGGATG AAGTCGTTTATAACATTTACGGTTCTCAAGTTACCGAATACTTGGAAGCT AGAAACGTTTTGTACAGAATCTTGCCATTGCCAACTACTGAAGAGAATAA GTCTATGGATATGGCCTTGAAGATCTTGGAAGAGGTCCACCAATTCGGTA TTGATAGAAGAACCGAACCTATTATTGCTATTGGTGGTGGTGTTTGTTTG GACATCGTTGGTTTGGCTGCCTCCTTGTACCGTAGAAGAACTCCATATAT TAGAGTTCCAACTACCTTATTGTCTTATATTGATGCTTCCGTCGGTGCTA AGACCGGTGTCAACTTTGCTAACTGTAAGAATAAGTTAGGTACTTATATC GCTCCAGTCGCCGCCTTCTTAGATAGATCTTTTATCCAATCCATCCCACG TAGACACATTGCTAATGGTTTAGCTGAAATGTTGAAGATGGCTTTGATGA AGCATAGAGGTTTATTTGAATTATTGGAAGTCCACGGTCAATTTTTGTTG GATTCTAAGTTTCAATCCGCTTCTGTTTTAGAAAACGATAGAATTGATCC AGCTTCTGTCTCCACCAGAGTTGCCATTGAAACTATGTTAGAAGAATTAG CTCCAAACTTGTGGGAGGACGACTTGGACCGTTTAGTCGACTTCGGTCAC TTAATTTCTCCACAATTGGAAATGAAGGTTTTACCAGCCTTATTGCATGG TGAAGCTGTTAACATTGATATGGCTTACATGGTTTACGTCTCTTGTGAAA TCGGTTTATTGACTGAAGAAGAAAAGTTTCGTATCATCTGTTGTATGATG GGTTTGGAATTGCCTGTCTGGCATCAAGATTTCACTTTCGCTTTGGTTCA AAAGTCCTTATGTGATAGATTGCAACACTCTGGTGGTTTGGTCAGAATGC CATTGCCTACCGGTTTGGGTAGAGCCGAAATTTTCAACGATACTGACGAG GGTTCTTTATTCAGAGCTTATGAAAAATGGTGTGACGAATTGTCTACTGG TTCTCCACAA S.cerevisiae-optimizedEEVSsequence#2 SEQIDNO.4 ATGGAAAGACCAGGTGAAACTTTTACTGTTTCCTCCCCAGAAGAAGTCAG ATTGCCTTCTGTTCACAGAGACAATTCTACTATGGAAAACCATAACAAGC AAGAAACTGTCTTCTCTTTAGTTCAAGTCAAGGGTACCTGGAAAAGAAAG GCTGGTCAAAACGCTAAACAAGGTATGAAGGGTAGAGTCTCCCCAGCTAA GATTTATGAATCCTCTTCCTCTTCTGGTACTACCTGGACCGTCGTCACTC CTATTACCTTCACCTACACTGTCACCCAAACTAAGAATTTGTTAGATCCA TCTAACGATACCTTGTTGTTAGGTCACATTATTGATACTCAACAATTAGA AGCTGTCCGTTCCAACACTAAGCCATTGAAAAGATTCATCGTTATGGATG AAGTTGTTTACAATATTTACGGTTCCCAAGTCACTGAATACTTGGAAGCT AGAAATGTTTTGTACAGAATTTTGCCTTTGCCTACCACTGAAGAAAATAA GTCTATGGACATGGCTTTAAAGATTTTAGAGGAAGTCCATCAATTCGGTA TCGATAGAAGAACTGAACCAATTATTGCTATCGGTGGTGGTGTCTGTTTG GATATCGTCGGTTTGGCTGCTTCTTTGTACAGAAGAAGAACTCCATACAT CAGAGTCCCAACCACTTTGTTGTCTTACATCGACGCTTCCGTTGGTGCTA AGACTGGTGTTAACTTCGCTAACTGTAAAAACAAGTTGGGTACCTACATC GCCCCAGTCGCCGCTTTCTTGGATAGATCTTTCATCCAATCTATCCCACG TCGTCATATTGCTAACGGTTTGGCCGAAATGTTGAAGATGGCCTTGATGA AACATAGAGGTTTATTCGAATTGTTAGAAGTTCATGGTCAATTCTTGTTG GATTCTAAGTTCCAATCCGCTTCCGTTTTGGAAAACGATCGTATCGATCC AGCCTCCGTCTCTACTAGAGTCGCTATCGAAACCATGTTAGAAGAATTGG CCCCAAACTTATGGGAAGACGACTTGGACAGATTAGTCGATTTCGGTCAT TTGATCTCTCCACAATTGGAAATGAAGGTCTTGCCAGCCTTGTTGCACGG TGAAGCTGTTAACATCGATATGGCTTACATGGTCTACGTTTCTTGTGAAA TTGGTTTATTAACCGAAGAAGAAAAATTCAGAATCATTTGTTGTATGATG GGTTTAGAATTGCCAGTCTGGCACCAAGACTTCACTTTCGCCTTGGTTCA AAAGTCTTTGTGTGACAGATTACAACACTCTGGTGGTTTGGTCAGAATGC CTTTGCCTACTGGTTTGGGTAGAGCTGAAATTTTCAACGATACTGACGAA GGTTCTTTGTTCCGTGCCTATGAAAAGTGGTGTGATGAGTTGTCCACTGG TTCTCCACAA S.cerevisiae-optimizedEEVSsequence#3 SEQIDNO.5 ATGGAACGTCCAGGTGAAACTTTTACCGTCTCTTCTCCAGAAGAAGTCAG ATTACCATCCGTTCACAGAGACAATTCTACTATGGAAAATCACAATAAGC AAGAAACCGTCTTTTCTTTGGTCCAAGTCAAGGGTACTTGGAAGCGTAAA GCCGGTCAAAACGCTAAGCAAGGTATGAAGGGTCGTGTTTCTCCTGCCAA GATTTATGAATCCTCCTCTTCCTCTGGTACTACTTGGACCGTTGTCACCC CAATTACCTTTACCTACACTGTCACCCAAACTAAAAATTTGTTAGATCCA TCCAATGACACCTTGTTGTTGGGTCATATTATTGACACCCAACAATTGGA AGCCGTTAGATCTAATACTAAGCCATTGAAGAGATTCATTGTTATGGATG AAGTCGTCTACAACATCTACGGTTCTCAAGTCACTGAATACTTGGAAGCT AGAAACGTCTTGTACCGTATCTTGCCATTGCCAACTACTGAAGAAAACAA ATCCATGGATATGGCCTTGAAGATTTTGGAAGAAGTCCACCAATTTGGTA TCGATAGAAGAACCGAACCAATCATTGCCATTGGTGGTGGTGTTTGTTTA GACATTGTTGGTTTGGCTGCCTCCTTGTATAGAAGAAGAACTCCATACAT TAGAGTCCCAACTACCTTGTTGTCTTACATCGATGCTTCTGTTGGTGCCA AGACTGGTGTTAACTTCGCTAACTGCAAGAACAAGTTGGGTACCTACATC GCCCCTGTCGCCGCTTTCTTGGACAGATCCTTCATCCAATCTATCCCTAG ACGTCATATTGCCAACGGTTTGGCTGAAATGTTGAAGATGGCTTTGATGA AGCATAGAGGTTTGTTCGAGTTGTTAGAAGTTCACGGTCAATTCTTATTA GATTCTAAGTTCCAATCTGCTTCTGTCTTAGAAAACGACCGTATTGACCC AGCTTCCGTTTCTACTAGAGTTGCTATTGAAACCATGTTGGAAGAATTAG CCCCAAACTTGTGGGAAGATGATTTGGACAGATTGGTTGACTTCGGTCAT TTAATCTCCCCACAATTGGAAATGAAGGTTTTGCCAGCTTTATTGCATGG TGAAGCCGTCAACATCGACATGGCTTACATGGTTTACGTCTCCTGTGAAA TCGGTTTGTTAACCGAAGAAGAAAAATTCAGAATCATCTGCTGTATGATG GGTTTGGAATTGCCAGTTTGGCACCAAGACTTCACTTTTGCTTTGGTTCA AAAGTCCTTGTGTGATAGATTGCAACACTCCGGTGGTTTAGTCAGAATGC CTTTACCAACTGGTTTAGGTCGTGCTGAAATCTTCAACGATACTGATGAA GGTTCCTTATTCAGAGCCTATGAAAAGTGGTGTGACGAATTATCTACTGG TTCTCCTCAA S.cerevisiae-optimizedEEVSsequence#4 SEQIDNO.6 ATGGAACGTCCAGGTGAAACTTTCACCGTCTCTTCCCCTGAAGAGGTTAG ATTGCCTTCTGTCCACAGAGACAACTCTACCATGGAAAACCATAACAAGC AAGAAACCGTCTTCTCCTTGGTTCAAGTCAAGGGTACTTGGAAGAGAAAG GCTGGTCAAAATGCTAAACAAGGTATGAAGGGTCGTGTTTCCCCAGCTAA GATTTACGAATCTTCCTCCTCTTCTGGTACTACCTGGACCGTTGTTACCC CAATCACCTTCACCTACACTGTCACCCAAACTAAGAATTTATTGGACCCA TCTAACGACACTTTGTTGTTGGGTCACATCATTGATACTCAACAATTGGA AGCTGTTAGATCTAACACTAAACCATTGAAAAGATTCATTGTTATGGATG AGGTTGTTTACAACATTTACGGTTCTCAAGTTACCGAATACTTAGAAGCC AGAAATGTTTTGTACAGAATTTTACCTTTGCCAACCACCGAAGAAAATAA GTCTATGGATATGGCTTTGAAAATCTTGGAAGAAGTCCATCAATTCGGTA TCGACAGAAGAACTGAACCAATCATCGCTATTGGTGGTGGTGTTTGTTTG GACATTGTCGGTTTGGCTGCTTCTTTGTACAGAAGAAGAACTCCATACAT CAGAGTCCCAACCACTTTGTTGTCCTACATTGATGCTTCTGTCGGTGCTA AGACTGGTGTTAACTTTGCTAACTGTAAGAACAAGTTAGGTACTTACATT GCCCCTGTTGCTGCCTTCTTGGACAGATCTTTCATCCAATCTATCCCAAG AAGACATATCGCTAACGGTTTAGCCGAAATGTTGAAAATGGCTTTAATGA AGCACAGAGGTTTGTTTGAATTGTTGGAAGTCCACGGTCAATTTTTGTTA GACTCTAAGTTCCAATCTGCCTCCGTTTTAGAAAACGATAGAATTGACCC AGCTTCTGTTTCCACCCGTGTTGCTATTGAGACCATGTTGGAAGAATTGG CCCCAAACTTGTGGGAAGACGACTTGGACCGTTTGGTCGATTTCGGTCAC TTAATCTCCCCACAATTGGAAATGAAGGTCTTGCCAGCTTTGTTGCATGG TGAAGCCGTTAACATTGATATGGCCTATATGGTCTACGTTTCTTGTGAAA TCGGTTTGTTGACCGAAGAGGAAAAGTTCAGAATTATCTGTTGTATGATG GGTTTGGAATTGCCAGTTTGGCATCAAGATTTTACCTTTGCTTTGGTTCA AAAGTCTTTGTGTGACAGATTGCAACATTCTGGTGGTTTGGTCAGAATGC CTTTGCCAACTGGTTTGGGTAGAGCTGAAATTTTCAACGACACTGATGAA GGTTCTTTGTTCAGAGCCTACGAAAAATGGTGCGATGAATTGTCTACCGG TTCCCCACAA S.cerevisiae-optimizedEEVSsequence#5 SEQIDNO.7 ATGGAAAGACCTGGTGAAACTTTTACTGTTTCTTCTCCTGAAGAAGTTAG ATTGCCATCTGTTCATAGAGACAACTCTACCATGGAAAATCATAACAAGC AAGAAACCGTCTTCTCTTTGGTCCAAGTCAAGGGTACCTGGAAGAGAAAG GCTGGTCAAAACGCCAAGCAAGGTATGAAGGGTAGAGTCTCCCCAGCCAA GATCTACGAATCCTCCTCTTCTTCCGGTACCACCTGGACTGTTGTCACCC CAATTACTTTCACTTACACTGTCACTCAAACTAAAAACTTGTTGGACCCA TCTAACGATACTTTGTTATTGGGTCACATTATTGACACCCAACAATTGGA AGCTGTCAGATCTAACACCAAGCCATTAAAGAGATTCATTGTCATGGATG AAGTTGTTTACAACATCTACGGTTCTCAAGTCACCGAATACTTGGAAGCT AGAAATGTTTTGTATCGTATTTTGCCATTGCCAACTACCGAGGAAAACAA GTCCATGGATATGGCCTTGAAGATTTTGGAAGAAGTCCATCAATTCGGTA TTGATAGAAGAACTGAACCAATTATCGCCATCGGTGGTGGTGTCTGCTTG GATATTGTTGGTTTAGCTGCTTCTTTGTATAGACGTAGAACTCCTTACAT TAGAGTTCCAACCACTTTATTATCCTACATCGACGCCTCCGTTGGTGCCA AAACTGGTGTTAACTTCGCTAACTGTAAGAACAAGTTGGGTACTTACATC GCTCCAGTTGCTGCCTTCTTGGACCGTTCTTTCATTCAATCTATCCCTCG TCGTCACATTGCCAATGGTTTAGCTGAAATGTTGAAAATGGCTTTGATGA AACATAGAGGTTTGTTCGAATTATTGGAAGTCCACGGTCAATTTTTGTTG GACTCTAAATTCCAATCCGCTTCTGTCTTGGAAAACGATAGAATTGACCC AGCTTCCGTTTCTACCAGAGTCGCTATCGAAACCATGTTGGAAGAATTGG CTCCAAACTTATGGGAAGATGATTTGGATAGATTGGTTGATTTCGGTCAC TTGATTTCCCCACAATTGGAAATGAAGGTTTTACCAGCCTTGTTGCACGG TGAAGCTGTTAATATTGATATGGCTTACATGGTCTATGTCTCTTGTGAAA TCGGTTTGTTGACTGAAGAAGAAAAGTTCAGAATCATTTGTTGTATGATG GGTTTGGAATTGCCAGTCTGGCATCAAGACTTCACTTTCGCTTTGGTTCA AAAGTCCTTATGTGACAGATTGCAACATTCCGGTGGTTTGGTCAGAATGC CATTGCCAACCGGTTTGGGTAGAGCTGAAATTTTCAACGACACTGACGAA GGTTCCTTGTTCCGTGCTTACGAAAAGTGGTGCGATGAATTGTCTACCGG TTCCCCACAA S.cerevisiae-optimizedEEVSsequence#6 SEQIDNO.8 ATGGAAAGACCAGGTGAAACTTTCACTGTTTCTTCTCCAGAAGAAGTTAG ATTGCCATCTGTTCACAGAGACAACTCTACTATGGAAAACCACAACAAGC AAGAAACTGTTTTCTCTTTGGTTCAAGTTAAGGGTACTTGGAAGAGAAAG GCTGGTCAAAACGCTAAGCAAGGTATGAAGGGTAGAGTTTCTCCAGCTAA GATCTACGAATCTTCTTCTTCTTCTGGTACTACTTGGACTGTTGTTACTC CAATCACTTTCACTTACACTGTTACTCAAACTAAGAACTTGTTGGACCCA TCTAACGACACTTTGTTGTTGGGTCACATCATCGACACTCAACAATTGGA AGCTGTTAGATCTAACACTAAGCCATTGAAGAGATTCATCGTTATGGACG AAGTTGTTTACAACATCTACGGTTCTCAAGTTACTGAATACTTGGAAGCT AGAAACGTTTTGTACAGAATCTTGCCATTGCCAACTACTGAAGAAAACAA GTCTATGGACATGGCTTTGAAGATCTTGGAAGAAGTTCACCAATTCGGTA TCGACAGAAGAACTGAACCAATCATCGCTATCGGTGGTGGTGTTTGTTTG GACATCGTTGGTTTGGCTGCTTCTTTGTACAGAAGAAGAACTCCATACAT CAGAGTTCCAACTACTTTGTTGTCTTACATCGACGCTTCTGTTGGTGCTA AGACTGGTGTTAACTTCGCTAACTGTAAGAACAAGTTGGGTACTTACATC GCTCCAGTTGCTGCTTTCTTGGACAGATCTTTCATCCAATCTATCCCAAG AAGACACATCGCTAACGGTTTGGCTGAAATGTTGAAGATGGCTTTGATGA AGCACAGAGGTTTGTTCGAATTGTTGGAAGTTCACGGTCAATTCTTGTTG GACTCTAAGTTCCAATCTGCTTCTGTTTTGGAAAACGACAGAATCGACCC AGCTTCTGTTTCTACTAGAGTTGCTATCGAAACTATGTTGGAAGAATTGG CTCCAAACTTGTGGGAAGACGACTTGGACAGATTGGTTGACTTCGGTCAC TTGATCTCTCCACAATTGGAAATGAAGGTTTTGCCAGCTTTGTTGCACGG TGAAGCTGTTAACATCGACATGGCTTACATGGTTTACGTTTCTTGTGAAA TCGGTTTGTTGACTGAAGAAGAAAAGTTCAGAATCATCTGTTGTATGATG GGTTTGGAATTGCCAGTTTGGCACCAAGACTTCACTTTCGCTTTGGTTCA AAAGTCTTTGTGTGACAGATTGCAACACTCTGGTGGTTTGGTTAGAATGC CATTGCCAACTGGTTTGGGTAGAGCTGAAATCTTCAACGACACTGACGAA GGTTCTTTGTTCAGAGCTTACGAAAAGTGGTGTGACGAATTGTCTACTGG TTCTCCACAA MT-OXcDNAfromDaniorerio(accessionno. zgc:113054) SEQIDNO.9 atgcagacagcaaaagtttcagacactcctgtggagttcatcgttgaaca cctgctgaaggcaaaagagatcgcagagaatcatgcaagtattccagtcg aacttcgggataatcttcagaaggctttggacattgctagtggactagac gaataccttgaacaaatgagcagcaaggagagtgaaccgttgactgagtt gtataggaaatcagtttctcatgactggaataaggtgcatgcggacggaa aaaccttatttaggcttcctgttacatgcatcaccggacaggtagaaggt caagtattgaagatgctggtgcatatgagcaaagcaaagagggtcttaga gataggaatgttcacagggtatggggccttgtcaatggcggaggccttac cagaaaatggccagcttatcgcctgtgagcttgagccttacctcaaagac tttgcacagcctatatttgataaatctcctcatgggaaaaagataactgt gaagactgggcctgctatggataccctgaaggaattggctgccacaggag agcagtttgacatggtatttattgacgcggacaagcagaactacatcaac tattataagttcctcctggaccataaccttctgcggatcgatggtgttat atgtgtcgacaacacactgtttaaaggcagagtttacctcaaggactctg tggatgaaatgggaaaagcattgcgggattttaatcagtttgtcacagct gatcctcgagtagagcaggtcatcatccctctgagagatggactcactat aatacgaagagtgccctatacacctcagccaaactcacagagtggtacag taacctatgatgaggtgtttagaggagtccaaggaaagccagttctggac aggttacgtttggatgggaaagtggcctatgtgaccggggccggtcaggg tattggcagggctttcgcacatgctctcggagaggctggagccaaagtcg ccatcatagacatggacagaggaaaggctgaggatgtggcgcatgaactg actttaaaaggcatttcaagcatggctgtagtggcagacattagcaaacc agacgacgtccagaagatgattgacgacatcgttacgaaatggggcacac ttcacattgcttgtaacaatgctggcatcaacaaaaactcagcaagtgag gagaccagtctagaagaatgggaccaaacctttaacgtgaacctcagagg cactttcatgtgctgccaggcggccggtcgtgtcatgctgaagcaaggat acggcaagataatcaacacagcttccatggccagtttaatagtgccgcat ccacagaagcagctgtcctataacacatccaaagctggagtagtgaaact cactcaaaccctgggcacagaatggattgaccgaggtgttcgagtcaatt gcatctcacctggtattgttgacacccctctcatccattcagagagtctg gagcctctagttcagcgctggctgtcagatatcccagccggacgactggc tcaagtgacagacctccaagctgcagtggtatacttggcatctgacgcct ctgactacatgacagggcataacttagtcatagagggtggtcagagtcta tgg OptimizedMT-OxforE.coli SEQIDNO.10 ATGCAAACGGCAAAAGTCTCGGACACCCCGGTTGAATTTATTGTGGAACA TCTGCTGAAGGCTAAGGAAATCGCTGAAAATCACGCTTCCATTCCGGTGG AACTGCGCGATAACCTGCAGAAAGCTCTGGATATCGCGAGCGGCCTGGAC GAATATCTGGAACAAATGAGCTCTAAAGAATCTGAACCGCTGACGGAACT GTACCGCAAGTCAGTCTCGCATGATTGGAATAAAGTGCACGCGGACGGCA AGACCCTGTTTCGTCTGCCGGTGACCTGCATTACGGGCCAGGTCGAAGGT CAAGTGCTGAAAATGCTGGTTCACATGAGTAAAGCGAAGCGTGTCCTGGA AATTGGCATGTTTACCGGCTATGGTGCCCTGTCCATGGCAGAAGCTCTGC CGGAAAACGGTCAGCTGATCGCTTGTGAACTGGAACCGTACCTGAAAGAT TTTGCACAACCGATTTTCGACAAGAGTCCGCATGGCAAAAAGATCACCGT GAAAACGGGTCCGGCAATGGATACCCTGAAGGAACTGGCGGCCACGGGCG AACAGTTTGACATGGTTTTCATTGATGCGGACAAGCAAAACTACATCAAC TACTACAAGTTCCTGCTGGATCACAACCTGCTGCGTATTGATGGCGTCAT CTGCGTGGACAATACGCTGTTCAAAGGTCGCGTGTACCTGAAGGATAGCG TTGACGAAATGGGTAAAGCCCTGCGTGATTTTAACCAGTTCGTGACCGCA GACCCGCGTGTTGAACAAGTCATTATCCCGCTGCGCGATGGCCTGACCAT TATCCGTCGCGTCCCGTATACGCCGCAGCCGAATAGCCAATCTGGTACCG TGACGTACGATGAAGTTTTTCGCGGCGTCCAGGGTAAACCGGTTCTGGAT CGTCTGCGCCTGGACGGCAAAGTGGCTTATGTTACCGGTGCCGGTCAGGG TATTGGTCGTGCATTCGCCCATGCACTGGGCGAAGCTGGTGCGAAAGTTG CCATTATCGATATGGACCGTGGCAAGGCCGAAGATGTCGCACACGAACTG ACCCTGAAAGGTATTAGTTCCATGGCCGTGGTTGCAGATATCAGCAAACC GGATGACGTGCAGAAGATGATTGATGACATCGTTACCAAATGGGGCACGC TGCATATTGCTTGCAACAATGCGGGTATCAACAAAAATAGTGCGTCCGAA GAAACCTCTCTGGAAGAATGGGATCAGACGTTTAACGTCAATCTGCGTGG CACCTTCATGTGCTGTCAGGCAGCTGGTCGCGTTATGCTGAAACAAGGCT ATGGCAAGATTATCAACACCGCTAGCATGGCGTCTCTGATTGTGCCGCAC CCGCAGAAACAACTGTCATACAATACGTCGAAAGCCGGCGTCGTGAAGCT GACCCAGACGCTGGGCACCGAATGGATCGATCGTGGTGTGCGCGTTAACT GTATTTCACCGGGTATCGTGGATACCCCGCTGATTCATTCAGAATCGCTG GAACCGCTGGTTCAGCGTTGGCTGTCGGATATCCCGGCAGGTCGTCTGGC ACAGGTGACGGACCTGCAAGCGGCCGTTGTCTATCTGGCCAGTGATGCAT CCGACTACATGACCGGTCACAATCTGGTTATTGAAGGCGGTCAGTCTCTG TGG S.cerevisiae-optimizedMT-Oxsequence#1 SEQIDNO.11 ATGCAAACCGCTAAAGTTTCTGATACTCCAGTCGAATTCATCGTTGAACA CTTGTTGAAAGCTAAAGAAATTGCTGAAAACCACGCCTCCATCCCAGTTG AATTGCGTGACAACTTGCAAAAGGCTTTGGACATTGCTTCTGGTTTGGAC GAATACTTAGAACAAATGTCTTCCAAGGAGTCTGAACCTTTGACCGAATT ATACAGAAAATCCGTCTCCCATGACTGGAACAAGGTTCATGCTGACGGTA AAACTTTGTTCAGATTGCCAGTTACTTGTATTACTGGTCAAGTTGAAGGT CAAGTCTTGAAGATGTTGGTTCACATGTCTAAGGCTAAGAGAGTTTTGGA AATTGGTATGTTCACCGGTTACGGTGCCTTATCCATGGCTGAAGCCTTGC CAGAGAACGGTCAATTAATTGCCTGTGAATTGGAGCCATATTTGAAGGAC TTTGCTCAACCAATTTTCGACAAGTCTCCACACGGTAAAAAAATTACTGT TAAGACCGGTCCAGCTATGGACACTTTAAAGGAATTGGCCGCTACTGGTG AACAATTCGACATGGTTTTCATTGATGCCGACAAGCAAAACTACATCAAC TACTACAAGTTCTTGTTGGATCACAACTTATTGAGAATCGATGGTGTTAT CTGTGTCGATAACACCTTGTTCAAGGGTAGAGTTTACTTGAAAGACTCTG TCGATGAGATGGGTAAGGCTTTGAGAGATTTCAACCAATTCGTTACTGCT GATCCACGTGTCGAACAAGTCATTATCCCATTGAGAGACGGTTTGACTAT CATTAGACGTGTTCCATACACCCCACAACCAAACTCTCAATCTGGTACTG TCACCTACGATGAAGTTTTCAGAGGTGTTCAAGGTAAGCCTGTTTTGGAC AGATTGCGTTTAGATGGTAAGGTTGCTTACGTTACTGGTGCTGGTCAAGG TATTGGTCGTGCTTTCGCTCACGCCTTGGGTGAAGCCGGTGCCAAAGTCG CTATTATCGATATGGACAGAGGTAAGGCCGAAGACGTTGCTCACGAATTG ACCTTGAAAGGTATCTCCTCCATGGCTGTCGTCGCCGATATCTCCAAGCC AGATGACGTTCAAAAGATGATTGACGATATTGTTACTAAGTGGGGTACCT TGCATATCGCTTGTAATAACGCTGGTATCAACAAGAACTCTGCTTCCGAA GAAACCTCTTTGGAAGAATGGGATCAAACTTTCAACGTCAATTTGAGAGG TACTTTCATGTGTTGTCAAGCTGCCGGTAGAGTTATGTTGAAACAAGGTT ACGGTAAGATTATTAATACCGCTTCTATGGCTTCCTTGATTGTCCCACAT CCACAAAAACAATTGTCTTATAATACTTCCAAGGCTGGTGTTGTTAAGTT GACTCAAACCTTAGGTACTGAATGGATCGACAGAGGTGTTAGAGTCAACT GTATCTCTCCAGGTATTGTCGATACCCCATTGATCCACTCTGAATCTTTA GAACCATTGGTCCAAAGATGGTTATCTGACATCCCAGCCGGTAGATTGGC TCAAGTTACTGATTTGCAAGCTGCTGTCGTCTACTTGGCTTCTGATGCTT CTGACTACATGACCGGTCACAACTTAGTCATCGAAGGTGGTCAATCTTTG TGG S.cerevisiae-optimizedMT-Oxsequence#2 SEQIDNO.12 ATGCAAACCGCTAAGGTTTCCGACACTCCAGTTGAATTTATCGTCGAACA CTTATTGAAAGCTAAGGAAATTGCCGAAAACCATGCCTCCATTCCAGTCG AATTGCGTGACAACTTGCAAAAGGCTTTGGACATTGCTTCTGGTTTGGAC GAATACTTGGAGCAAATGTCCTCTAAGGAATCTGAACCATTGACCGAATT GTATCGTAAATCCGTCTCCCATGATTGGAATAAGGTTCACGCCGACGGTA AGACTTTGTTTAGATTGCCAGTCACTTGTATCACCGGTCAAGTTGAAGGT CAAGTTTTAAAGATGTTGGTTCACATGTCCAAGGCTAAGAGAGTCTTGGA AATTGGTATGTTCACTGGTTATGGTGCCTTATCCATGGCCGAAGCTTTGC CAGAAAACGGTCAATTGATTGCTTGCGAATTGGAACCATATTTGAAGGAT TTCGCTCAACCAATTTTCGATAAATCTCCACACGGTAAGAAAATTACTGT CAAGACTGGTCCTGCTATGGACACTTTAAAAGAATTGGCCGCTACTGGTG AGCAATTCGACATGGTTTTCATCGATGCCGATAAACAAAACTATATTAAC TACTATAAATTCTTGTTGGACCACAACTTGTTGAGAATTGATGGTGTCAT CTGTGTCGATAACACCTTGTTCAAGGGTAGAGTCTACTTAAAGGACTCTG TCGATGAAATGGGTAAGGCTTTAAGAGACTTCAACCAATTCGTTACCGCT GATCCAAGAGTTGAACAAGTCATTATTCCATTGAGAGATGGTTTGACTAT TATTCGTAGAGTTCCTTACACTCCACAACCAAACTCTCAATCTGGTACCG TCACCTACGATGAAGTTTTCAGAGGTGTTCAAGGTAAACCAGTCTTGGAT AGATTGAGATTAGATGGTAAGGTTGCCTACGTTACCGGTGCTGGTCAAGG TATCGGTAGAGCTTTCGCCCACGCTTTGGGTGAAGCTGGTGCCAAGGTCG CTATCATCGATATGGATAGAGGTAAGGCCGAAGATGTTGCCCACGAATTG ACCTTAAAAGGTATCTCCTCCATGGCTGTCGTCGCTGATATCTCTAAACC TGACGATGTTCAAAAAATGATTGACGACATCGTCACCAAGTGGGGTACTT TGCATATTGCTTGTAATAACGCTGGTATTAACAAGAACTCTGCTTCTGAA GAAACTTCTTTGGAAGAATGGGATCAAACTTTCAACGTTAACTTGAGAGG TACTTTCATGTGTTGTCAAGCTGCCGGTAGAGTCATGTTGAAGCAAGGTT ACGGTAAGATTATCAACACTGCCTCCATGGCCTCCTTGATTGTTCCACAT CCACAAAAACAATTGTCTTACAACACCTCCAAGGCCGGTGTTGTCAAGTT GACCCAAACCTTGGGTACTGAGTGGATTGATAGAGGTGTCAGAGTCAACT GTATCTCTCCAGGTATTGTTGATACTCCTTTGATTCACTCCGAGTCCTTG GAACCATTGGTTCAAAGATGGTTATCCGACATCCCAGCTGGTAGATTGGC TCAAGTTACCGATTTGCAAGCTGCTGTTGTTTACTTGGCCTCCGATGCCT CCGATTACATGACTGGTCATAACTTGGTCATTGAAGGTGGTCAATCCTTG TGG S.cerevisiae-optimizedMT-Oxsequence#3 SEQIDNO.13 ATGCAAACTGCCAAGGTCTCCGACACCCCAGTCGAATTCATTGTTGAACA CTTGTTGAAGGCTAAAGAAATCGCTGAAAATCACGCTTCTATTCCTGTTG AATTAAGAGACAACTTGCAAAAAGCCTTGGACATTGCTTCTGGTTTAGAC GAATACTTGGAACAAATGTCTTCTAAAGAATCCGAGCCATTGACTGAATT GTACAGAAAGTCTGTCTCCCACGACTGGAACAAGGTTCACGCTGACGGTA AGACCTTGTTCCGTTTACCTGTTACCTGTATCACCGGTCAAGTCGAAGGT CAAGTTTTGAAAATGTTGGTTCATATGTCCAAGGCTAAGAGAGTCTTGGA GATCGGTATGTTTACCGGTTACGGTGCCTTGTCTATGGCCGAAGCCTTGC CAGAAAACGGTCAATTGATCGCTTGTGAATTGGAACCATATTTGAAGGAC TTCGCTCAACCTATCTTCGACAAGTCCCCACACGGTAAGAAGATCACCGT CAAGACCGGTCCAGCCATGGATACTTTGAAAGAATTGGCCGCTACTGGTG AACAATTCGATATGGTTTTCATCGATGCTGATAAACAAAACTATATCAAT TACTACAAGTTCTTGTTGGATCACAACTTGTTAAGAATCGATGGTGTTAT CTGTGTTGATAACACCTTGTTCAAGGGTAGAGTTTACTTGAAGGACTCTG TCGACGAAATGGGTAAAGCTTTGAGAGACTTTAACCAATTCGTTACCGCT GACCCAAGAGTTGAACAAGTTATCATTCCATTAAGAGATGGTTTGACCAT TATTCGTAGAGTTCCATATACTCCTCAACCAAACTCTCAATCTGGTACTG TCACTTACGACGAAGTCTTCAGAGGTGTTCAAGGTAAGCCTGTCTTGGAC CGTTTACGTTTGGATGGTAAGGTCGCTTACGTCACCGGTGCTGGTCAAGG TATTGGTAGAGCTTTCGCTCACGCTTTGGGTGAAGCTGGTGCCAAGGTCG CTATTATCGACATGGATAGAGGTAAGGCTGAAGATGTCGCTCATGAATTG ACTTTGAAGGGTATCTCTTCCATGGCTGTTGTTGCTGATATTTCTAAGCC AGATGACGTTCAAAAAATGATCGATGACATCGTTACTAAGTGGGGTACTT TGCACATCGCCTGTAATAACGCTGGTATTAATAAAAACTCCGCTTCTGAA GAGACTTCTTTGGAAGAATGGGATCAAACCTTCAACGTTAACTTAAGAGG TACTTTCATGTGTTGTCAAGCTGCTGGTAGAGTCATGTTGAAGCAAGGTT ACGGTAAGATTATTAACACCGCTTCCATGGCTTCTTTGATTGTTCCACAC CCACAAAAACAATTGTCCTACAACACCTCCAAAGCTGGTGTCGTTAAATT GACCCAAACTTTGGGTACTGAATGGATTGATAGAGGTGTCCGTGTTAACT GTATTTCTCCAGGTATCGTCGACACCCCTTTGATTCATTCTGAGTCCTTG GAACCATTGGTCCAAAGATGGTTATCCGACATTCCAGCCGGTAGATTGGC TCAAGTCACCGACTTGCAAGCCGCCGTCGTCTACTTGGCTTCCGACGCTT CCGACTACATGACTGGTCATAATTTGGTCATTGAAGGTGGTCAATCTTTA TGG S.cerevisiae-optimizedMT-Oxsequence#4 SEQIDNO.14 ATGCAAACTGCTAAAGTTTCTGATACTCCTGTCGAATTCATCGTCGAACA TTTGTTAAAGGCTAAGGAAATCGCCGAAAACCACGCCTCTATCCCTGTTG AATTAAGAGATAACTTGCAAAAGGCTTTGGATATTGCTTCTGGTTTGGAC GAATACTTAGAACAAATGTCTTCTAAGGAATCTGAACCATTGACCGAATT GTACCGTAAATCCGTTTCTCACGACTGGAACAAAGTCCATGCTGACGGTA AAACCTTGTTTAGATTGCCAGTTACCTGTATCACTGGTCAAGTTGAAGGT CAAGTCTTAAAAATGTTGGTTCACATGTCTAAGGCCAAGCGTGTCTTGGA AATTGGTATGTTTACTGGTTATGGTGCTTTATCTATGGCTGAAGCTTTGC CAGAAAACGGTCAATTGATTGCTTGTGAATTGGAACCTTACTTGAAGGAC TTCGCTCAACCTATCTTCGACAAGTCCCCACACGGTAAAAAGATCACCGT TAAGACTGGTCCAGCTATGGATACTTTGAAAGAATTAGCTGCTACTGGTG AGCAATTCGACATGGTTTTCATCGATGCTGACAAACAAAACTACATCAAC TATTACAAGTTTTTGTTGGACCATAACTTGTTGAGAATCGATGGTGTCAT TTGTGTTGATAACACCTTATTCAAAGGTAGAGTCTACTTAAAAGACTCTG TCGACGAAATGGGTAAGGCTTTAAGAGACTTCAACCAATTTGTTACTGCT GACCCAAGAGTTGAACAAGTTATTATCCCATTGAGAGATGGTTTGACTAT TATCCGTAGAGTTCCATACACTCCACAACCAAACTCTCAATCCGGTACCG TTACTTATGATGAAGTCTTCCGTGGTGTCCAAGGTAAACCAGTCTTGGAC AGATTGAGATTGGATGGTAAGGTCGCCTATGTTACCGGTGCTGGTCAAGG TATCGGTAGAGCTTTCGCTCACGCCTTGGGTGAGGCCGGTGCCAAAGTTG CTATTATTGATATGGACAGAGGTAAGGCTGAAGACGTTGCCCACGAATTG ACCTTGAAGGGTATTTCTTCCATGGCCGTCGTTGCCGATATTTCTAAGCC AGACGACGTTCAAAAGATGATTGACGATATCGTTACTAAATGGGGTACTT TACACATCGCTTGTAACAATGCTGGTATTAATAAGAACTCTGCTTCCGAG GAAACCTCTTTGGAAGAATGGGATCAAACTTTTAATGTCAATTTGAGAGG TACCTTCATGTGTTGTCAAGCTGCTGGTAGAGTTATGTTGAAGCAAGGTT ACGGTAAGATTATTAACACCGCTTCCATGGCTTCTTTGATCGTCCCTCAC CCACAAAAGCAATTGTCTTACAACACCTCCAAGGCCGGTGTTGTCAAGTT AACTCAAACTTTAGGTACTGAGTGGATCGACAGAGGTGTCAGAGTTAACT GCATTTCTCCAGGTATTGTTGACACCCCATTGATCCATTCCGAATCCTTG GAACCATTAGTCCAAAGATGGTTGTCCGACATTCCTGCCGGTAGATTGGC TCAAGTCACTGACTTGCAAGCCGCTGTCGTTTATTTGGCCTCTGACGCTT CCGATTATATGACCGGTCACAACTTGGTCATCGAAGGTGGTCAATCTTTA TGG S.cerevisiae-optimizedMT-Oxsequence#5 SEQIDNO.15 ATGCAAACTGCTAAGGTCTCCGACACTCCTGTTGAATTTATCGTTGAACA TTTGTTGAAGGCTAAAGAAATCGCCGAAAACCACGCTTCCATCCCAGTCG AATTGAGAGATAATTTACAAAAGGCTTTAGATATTGCTTCTGGTTTGGAC GAATACTTGGAACAAATGTCTTCCAAGGAATCTGAACCATTGACTGAGTT GTACAGAAAGTCCGTTTCTCATGATTGGAACAAAGTTCACGCTGACGGTA AGACCTTGTTCCGTTTGCCAGTTACTTGTATTACTGGTCAAGTTGAAGGT CAAGTCTTGAAGATGTTGGTCCACATGTCTAAAGCTAAGAGAGTTTTGGA AATCGGTATGTTTACCGGTTACGGTGCCTTGTCCATGGCCGAAGCTTTGC CAGAAAACGGTCAATTGATTGCTTGTGAATTGGAACCATACTTAAAGGAT TTTGCTCAACCAATTTTTGACAAATCCCCTCATGGTAAGAAGATCACTGT TAAGACTGGTCCAGCTATGGATACCTTGAAGGAATTGGCTGCTACTGGTG AACAATTCGACATGGTCTTCATTGATGCCGATAAGCAAAACTACATTAAC TACTACAAGTTTTTGTTGGATCATAACTTGTTAAGAATTGATGGTGTTAT CTGTGTTGACAACACCTTGTTCAAAGGTAGAGTTTATTTGAAAGATTCCG TCGATGAAATGGGTAAGGCTTTAAGAGACTTCAACCAATTTGTCACTGCT GACCCAAGAGTTGAACAAGTCATTATCCCATTGCGTGATGGTTTGACTAT CATCCGTAGAGTTCCTTACACTCCACAACCAAACTCTCAATCTGGTACTG TTACTTACGACGAAGTCTTCAGAGGTGTTCAAGGTAAGCCAGTTTTGGAC AGATTGAGATTGGACGGTAAGGTTGCTTACGTCACCGGTGCTGGTCAAGG TATTGGTAGAGCTTTCGCTCACGCTTTGGGTGAAGCTGGTGCTAAGGTTG CTATCATCGACATGGATAGAGGTAAGGCTGAAGATGTCGCTCACGAATTG ACCTTGAAGGGTATTTCTTCTATGGCTGTTGTTGCTGATATTTCTAAGCC AGACGATGTCCAAAAGATGATTGATGACATCGTCACTAAGTGGGGTACCT TGCATATCGCCTGTAACAACGCTGGTATCAACAAGAATTCTGCTTCTGAA GAAACTTCTTTGGAAGAATGGGACCAAACTTTCAACGTTAACTTGCGTGG TACTTTCATGTGTTGTCAAGCTGCTGGTCGTGTCATGTTGAAGCAAGGTT ACGGTAAGATTATTAACACTGCTTCTATGGCTTCCTTGATCGTTCCTCAC CCACAAAAGCAATTGTCTTACAACACTTCTAAGGCTGGTGTCGTCAAGTT GACTCAAACCTTGGGTACCGAATGGATCGATAGAGGTGTCCGTGTTAACT GCATCTCCCCAGGTATCGTCGATACCCCATTGATTCACTCTGAGTCTTTG GAGCCATTGGTTCAAAGATGGTTGTCTGACATTCCAGCCGGTAGATTAGC TCAAGTTACTGATTTGCAAGCTGCCGTCGTCTACTTGGCTTCCGACGCCT CTGATTACATGACTGGTCATAACTTGGTCATTGAAGGTGGTCAATCTTTA TGG S.cerevisiae-optimizedMT-Oxsequence#6 SEQIDNO.16 ATGCAAACTGCTAAGGTTTCTGACACTCCAGTTGAATTCATCGTTGAACA CTTGTTGAAGGCTAAGGAAATCGCTGAAAACCACGCTTCTATCCCAGTTG AATTGAGAGACAACTTGCAAAAGGCTTTGGACATCGCTTCTGGTTTGGAC GAATACTTGGAACAAATGTCTTCTAAGGAATCTGAACCATTGACTGAATT GTACAGAAAGTCTGTTTCTCACGACTGGAACAAGGTTCACGCTGACGGTA AGACTTTGTTCAGATTGCCAGTTACTTGTATCACTGGTCAAGTTGAAGGT CAAGTTTTGAAGATGTTGGTTCACATGTCTAAGGCTAAGAGAGTTTTGGA AATCGGTATGTTCACTGGTTACGGTGCTTTGTCTATGGCTGAAGCTTTGC CAGAAAACGGTCAATTGATCGCTTGTGAATTGGAACCATACTTGAAGGAC TTCGCTCAACCAATCTTCGACAAGTCTCCACACGGTAAGAAGATCACTGT TAAGACTGGTCCAGCTATGGACACTTTGAAGGAATTGGCTGCTACTGGTG AACAATTCGACATGGTTTTCATCGACGCTGACAAGCAAAACTACATCAAC TACTACAAGTTCTTGTTGGACCACAACTTGTTGAGAATCGACGGTGTTAT CTGTGTTGACAACACTTTGTTCAAGGGTAGAGTTTACTTGAAGGACTCTG TTGACGAAATGGGTAAGGCTTTGAGAGACTTCAACCAATTCGTTACTGCT GACCCAAGAGTTGAACAAGTTATCATCCCATTGAGAGACGGTTTGACTAT CATCAGAAGAGTTCCATACACTCCACAACCAAACTCTCAATCTGGTACTG TTACTTACGACGAAGTTTTCAGAGGTGTTCAAGGTAAGCCAGTTTTGGAC AGATTGAGATTGGACGGTAAGGTTGCTTACGTTACTGGTGCTGGTCAAGG TATCGGTAGAGCTTTCGCTCACGCTTTGGGTGAAGCTGGTGCTAAGGTTG CTATCATCGACATGGACAGAGGTAAGGCTGAAGACGTTGCTCACGAATTG ACTTTGAAGGGTATCTCTTCTATGGCTGTTGTTGCTGACATCTCTAAGCC AGACGACGTTCAAAAGATGATCGACGACATCGTTACTAAGTGGGGTACTT TGCACATCGCTTGTAACAACGCTGGTATCAACAAGAACTCTGCTTCTGAA GAAACTTCTTTGGAAGAATGGGACCAAACTTTCAACGTTAACTTGAGAGG TACTTTCATGTGTTGTCAAGCTGCTGGTAGAGTTATGTTGAAGCAAGGTT ACGGTAAGATCATCAACACTGCTTCTATGGCTTCTTTGATCGTTCCACAC CCACAAAAGCAATTGTCTTACAACACTTCTAAGGCTGGTGTTGTTAAGTT GACTCAAACTTTGGGTACTGAATGGATCGACAGAGGTGTTAGAGTTAACT GTATCTCTCCAGGTATCGTTGACACTCCATTGATCCACTCTGAATCTTTG GAACCATTGGTTCAAAGATGGTTGTCTGACATCCCAGCTGGTAGATTGGC TCAAGTTACTGACTTGCAAGCTGCTGTTGTTTACTTGGCTTCTGACGCTT CTGACTACATGACTGGTCACAACTTGGTTATCGAAGGTGGTCAATCTTTG TGG pUC57-Kan(Addgene) SEQIDNO.17 tcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccg gagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccg tcagggcgcgtcagcgggtgttggcgggtgtcggggctggcttaactatg cggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaata ccgcacagatgcgtaaggagaaaataccgcatcaggcgccattcgccatt caggctgcgcaactgttgggaagggcgatcggtgcgggcctcttcgctat tacgccagctggcgaaagggggatgtgctgcaaggcgattaagttgggta acgccagggttttcccagtcacgacgttgtaaaacgacggccagtgaatt cgagctcggtacctcgcgaatgcatctagatatcggatcccgggcccgtc gactgcagaggcctgcatgcaagcttggcgtaatcatggtcatagctgtt tcctgtgtgaaattgttatccgctcacaattccacacaacatacgagccg gaagcataaagtgtaaagcctggggtgcctaatgagtgagctaactcaca ttaattgcgttgcgctcactgcccgctttccagtcgggaaacctgtcgtg ccagctgcattaatgaatcggccaacgcgcggggagaggcggtttgcgta ttgggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgtt cggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatc cacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagc aaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccatagg ctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtg gcgaaacccgacaggactataaagataccaggcgtttccccctggaagct ccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtcc gcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtag gtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacg aaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtctt gagtccaacccggtaagacacgacttatcgccactggcagcagccactgg taacaggattagcagagcgaggtatgtaggcggtgctacagagttcttga agtggtggcctaactacggctacactagaagaacagtatttggtatctgc gctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatc cggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagc agattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttct acggggtctgacgctcagtggaacgaaaactcacgttaagggattttggt catgagattatcaaaaaggatcttcacctagatccttttaaattaaaaat gaagttttaaatcaagcccaatctgaataatgttacaaccaattaaccaa ttctgattagaaaaactcatcgagcatcaaatgaaactgcaatttattca tatcaggattatcaataccatatttttgaaaaagccgtttctgtaatgaa ggagaaaactcaccgaggcagttccataggatggcaagatcctggtatcg gtctgcgattccgactcgtccaacatcaatacaacctattaatttcccct cgtcaaaaataaggttatcaagtgagaaatcaccatgagtgacgactgaa tccggtgagaatggcaaaagtttatgcatttctttccagacttgttcaac aggccagccattacgctcgtcatcaaaatcactcgcatcaaccaaaccgt tattcattcgtgattgcgcctgagcgagacgaaatacgcgatcgctgtta aaaggacaattacaaacaggaatcgaatgcaaccggcgcaggaacactgc cagcgcatcaacaatattttcacctgaatcaggatattcttctaatacct ggaatgctgtttttccggggatcgcagtggtgagtaaccatgcatcatca ggagtacggataaaatgcttgatggtcggaagaggcataaattccgtcag ccagtttagtctgaccatctcatctgtaacatcattggcaacgctacctt tgccatgtttcagaaacaactctggcgcatcgggcttcccatacaagcga tagattgtcgcacctgattgcccgacattatcgcgagcccatttataccc atataaatcagcatccatgttggaatttaatcgcggcctcgacgtttccc gttgaatatggctcataacaccccttgtattactgtttatgtaagcagac agttttattgttcatgatgatatatttttatcttgtgcaatgtaacatca gagattttgagacacgggccagagctgca pRSETB(seetheworldwideweb;tools. lifetechnologies.com/content/sfs/vectors/ prsetb_seq.txt) >pRSETB SEQIDNO.18 GATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGAGACCACAACG GTTTCCCTCTAGAAATAATTTTGTTTAACTTTAAGAAGGAGATATACATA TGCGGGGTTCTCATCATCATCATCATCATGGTATGGCTAGCATGACTGGT GGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGAG CTCGAGATCTGCAGCTGGTACCATGGAATTCGAAGCTTGATCCGGCTGCT AACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGC TGAAAGGAGGAACTATATCCGGATCTGGCGTAATAGCGAAGAGGCCCGCA CCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGGACGCG CCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGT GACCGCTACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCC CTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCTCTAAATCGG GGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAA AAAACTTGATTAGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGA CGGTTTTTCGCCCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTC TTGTTCCAAACTGGAACAACACTCAACCCTATCTCGGTCTATTCTTTTGA TTTATAAGGGATTTTGCCGATTTCGGCCTATTGGTTAAAAAATGAGCTGA TTTAACAAAAATTTAACGCGAATTTTAACAAAATATTAACGCTTACAATT TAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTT TTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATA AATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCC GTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCT CACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGC ACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGA GTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTG CTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGG TCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCA CAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCT GCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACGAT CGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATG TAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAAC GACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAA ACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAG ACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTT CCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTC TCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCG TAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGA CAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGA CCAAGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAAT TTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATC CCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGAT CAAAGGATCTTCTTGAGATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGC AAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAG CTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACC AAATACTGTTCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACT CTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCT GCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATA GTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACAC AGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGT GAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTA TCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAG GGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGA CTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAA AAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTT TTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGT ATTACCGCCTTTGAGTGAGCTGATACCGCTCGCCGCAGCCGAACGACCGA GCGCAGCGAGTCAGTGAGCGAGGAAGCGGAAGAGCGCCCAATACGCAAAC CGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAG pXP416(www.addgene.org/26842/sequences/) >p416 SEQIDNO.19 TCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCG GAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCG TCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCTTAACTATG CGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATA CCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATT CAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTAT TACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTA ACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGCCAA GCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCGGGATAACTTCGTA TAGCATACATTATACGAAGTTATAACGACATTACTATATATATAATATAG GAAGCATTTAATAGAACAGCATCGTAATATATGTGTACTTTGCAGTTATG ACGCCAGATGGCAGTAGTGGAAGATATTCTTTATTGAAAAATAGCTTGTC ACCTTACGTACAATCTTGATCCGGAGCTTTTCTTTTTTTGCCGATTAAGA ATTAATTCGGTCGAAAAAAGAAAAGGAGAGGGCCAAGAGGGAGGGCATTG GTGACTATTGAGCACGTGAGTATACGTGATTAAGCACACAAAGGCAGCTT GGAGTATGTCTGTTATTAATTTCACAGGTAGTTCTGGTCCATTGGTGAAA GTTTGCGGCTTGCAGAGCACAGAGGCCGCAGAATGTGCTCTAGATTCCGA TGCTGACTTGCTGGGTATTATATGTGTGCCCAATAGAAAGAGAACAATTG ACCCGGTTATTGCAAGGAAAATTTCAAGTCTTGTAAAAGCATATAAAAAT AGTTCAGGCACTCCGAAATACTTGGTTGGCGTGTTTCGTAATCAACCTAA GGAGGATGTTTTGGCTCTGGTCAATGATTACGGCATTGATATCGTCCAAC TGCATGGAGATGAGTCGTGGCAAGAATACCAAGAGTTCCTCGGTTTGCCA GTTATTAAAAGACTCGTATTTCCAAAAGACTGCAACATACTACTCAGTGC AGCTTCACAGAAACCTCATTCGTTTATTCCCTTGTTTGATTCAGAAGCAG GTGGGACAGGTGAACTTTTGGATTGGAACTCGATTTCTGACTGGGTTGGA AGGCAAGAGAGCCCCGAAAGCTTACATTTTATGTTAGCTGGTGGACTGAC GCCAGAAAATGTTGGTGATGCGCTTAGATTAAATGGCGTTATTGGTGTTG ATGTAAGCGGAGGTGTGGAGACAAATGGTGTAAAAGACTCTAACAAAATA GCAAATTTCGTCAAAAATGCTAAGAAATAGGTTATTACTGAGTAGTATTT ATTTAAGTATTGTTTGTGCACTTGCCTGATAACTTCGTATAGCATACATT ATACGAAGTTATCCCGGGTACCGAGCTCGAATTCAACGAAGCATCTGTGC TTCATTTTGTAGAACAAAAATGCAACGCGAGAGCGCTAATTTTTCAAACA AAGAATCTGAGCTGCATTTTTACAGAACAGAAATGCAACGCGAAAGCGCT ATTTTACCAACGAAGAATCTGTGCTTCATTTTTGTAAAACAAAAATGCAA CGCGAGAGCGCTAATTTTTCAAACAAAGAATCTGAGCTGCATTTTTACAG AACAGAAATGCAACGCGAGAGCGCTATTTTACCAACAAAGAATCTATACT TCTTTTTTGTTCTACAAAAATGCATCCCGAGAGCGCTATTTTTCTAACAA AGCATCTTAGATTACTTTTTTTCTCCTTTGTGCGCTCTATAATGCAGTCT CTTGATAACTTTTTGCACTGTAGGTCCGTTAAGGTTAGAAGAAGGCTACT TTGGTGTCTATTTTCTCTTCCATAAAAAAAGCCTGACTCCACTTCCCGCG TTTACTGATTACTAGCGAAGCTGCGGGTGCATTTTTTCAAGATAAAGGCA TCCCCGATTATATTCTATACCGATGTGGATTGCGCATACTTTGTGAACAG AAAGTGATAGCGTTGATGATTCTTCATTGGTCAGAAAATTATGAACGGTT TCTTCTATTTTGTCTCTATATACTACGTATAGGAAATGTTTACATTTTCG TATTGTTTTCGATTCACTCTATGAATAGTTCTTACTACAATTTTTTTGTC TAAAGAGTAATACTAGAGATAAACATAAAAAATGTAGAGGTCGAGTTTAG ATGCAAGTTCAAGGAGCGAAAGGTGGATGGGTAGGTTATATAGGGATATA GCACAGAGATATATAGCAAAGAGATACTTTTGAGCAATGTTTGTGGAAGC GGTATTCGCAATATTTTAGTAGCTCGTTACAGTCCGGTGCGTTTTTGGTT TTTTGAAAGTGCGTCTTCAGAGCGCTTTTGGTTTTCAAAAGCGCTCTGAA GTTCCTATACTTTCTAGAGAATAGGAACTTCGGAATAGGAACTTCAAAGC GTTTCCGAAAACGAGCGCTTCCGAAAATGCAACGCGAGCTGCGCACATAC AGCTCACTGTTCACGTCGCACCTATATCTGCGTGTTGCCTGTATATATAT ATACATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAATGCGTACTTA TATGCGTCTATTTATGTAGGATGAAAGGTAGTCTAGTACCTCCTGTGATA TTATCCCATTCCATGCGGGGTATCGTATGCTTCCTTCAGCACTACCCTTT AGCTGTTCTATATGCTGCCACTCCTCAATTGGATTAGTCTCATCCTTCAA TGCTATCATTTCCTTTGATATTGGATCATACGAATTCGTAATCATGGTCA TAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACAT ACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCT AACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAAC CTGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGG TTTGCGTATTGGGCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCT CGGTCGTTCGGCTGCGGCGAGCGGTATCAGCTCACTCAAAGGCGGTAATA CGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT TCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGT CAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGAT ACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCA CGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACT ATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCA GCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTG GTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGC TCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG CAAGCAGCAGATTACGCGCAGAAAAAAAGGATCTCAAGAAGATCCTTTGA TCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGG ATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTAAA TTAAAAATGAAGTTTTAAATCAATCTAAAGTATATATGAGTAAACTTGGT CTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGT CTATTTCGTTCATCCATAGTTGCCTGACTCCCCGTCGTGTAGATAACTAC GATACGGGAGGGCTTACCATCTGGCCCCAGTGCTGCAATGATACCGCGAG ACCCACGCTCACCGGCTCCAGATTTATCAGCAATAAACCAGCCAGCCGGA AGGGCCGAGCGCAGAAGTGGTCCTGCAACTTTATCCGCCTCCATCCAGTC TATTAATTGTTGCCGGGAAGCTAGAGTAAGTAGTTCGCCAGTTAATAGTT TGCGCAACGTTGTTGCCATTGCTACAGGCATCGTGGTGTCACGCTCGTCG TTTGGTATGGCTTCATTCAGCTCCGGTTCCCAACGATCAAGGCGAGTTAC ATGATCCCCCATGTTGTGCAAAAAAGCGGTTAGCTCCTTCGGTCCTCCGA TCGTTGTCAGAAGTAAGTTGGCCGCAGTGTTATCACTCATGGTTATGGCA GCACTGCATAATTCTCTTACTGTCATGCCATCCGTAAGATGCTTTTCTGT GACTGGTGAGTACTCAACCAAGTCATTCTGAGAATAGTGTATGCGGCGAC CGAGTTGCTCTTGCCCGGCGTCAATACGGGATAATACCGCGCCACATAGC AGAACTTTAAAAGTGCTCATCATTGGAAAACGTTCTTCGGGGCGAAAACT CTCAAGGATCTTACCGCTGTTGAGATCCAGTTCGATGTAACCCACTCGTG CACCCAACTGATCTTCAGCATCTTTTACTTTCACCAGCGTTTCTGGGTGA GCAAAAACAGGAAGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACG GAAATGTTGAATACTCATACTCTTCCTTTTTCAATATTACCGCGAATCCT TACATCACACCCAATCCCCCACAAGTGATCCCCCACACACCATAGCTTCA AAATGTTTCTACTCCTTTTTTACTCTTCCAGATTTTCTCGGACTCCGCGC ATCGCCGTACCACTTCAAAACACCCAAGCACAGCATACTAAATTTCCCCT CTTTCTTCCTCTAGGGTGTCGTTAATTACCCGTACTAAAGGTTTGGAAAA GAAAAAAGAGACCGCCTCGTTTCTTTTTCTTCGTCGAAAAAGGCAATAAA AATTTTTATCACGTTTCTTTTTCTTGAAAATTTTTTTTTTTGATTTTTTT CTCTTTCGATGACCTCCCATTGATATTTAAGTTAATAAACGGTCTTCAAT TTCTCAAGTTTCAGTTTCATTTTTCTTGTTCTATTACAACTTTTTTTACT TCTTGCTCATTAGAAAGAAAGCATAGCAATCTAATCTAAGTTTTAATTAC AAAACTAGTGATATCTGCGCACTCGAGTCATGTAATTAGTTATGTCACGC TTACATTCACGCCCTCCCCCCACATCCGCTCTAACCGAAAAGGAAGGAGT TAGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTATAGTTATGTTAG TATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAGA CGCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTT GGGACGCTCGAAGGCTTTAATTTGCGGCCAATATTATTGAAGCATTTATC AGGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAAT AAACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGT CTAAGAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCA CGAGGCCCTTTCGTC pXP420(www.addgene.org/26844/sequences/) >pXP420 SEQIDNO.20 TCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCG GAGACGGTCACAGCTTGTCTGTAAGCGGATGCCGGGAGCAGACAAGCCCG TCAGGGCGCGTCAGCGGGTGTTGGCGGGTGTCGGGGCTGGCTTAACTATG CGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATA CCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATT CAGGCTGCGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTAT TACGCCAGCTGGCGAAAGGGGGATGTGCTGCAAGGCGATTAAGTTGGGTA ACGCCAGGGTTTTCCCAGTCACGACGTTGTAAAACGACGGCCAGTGCCAA GCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCGGGATAACTTCGTA TAGCATACATTATACGAAGTTATCGTTTTAAGAGCTTGGTGAGCGCTAGG AGTCACTGCCAGGTATCGTTTGAACACGGCATTAGTCAGGGAAGTCATAA CACAGTCCTTTCCCGCAATTTTCTTTTTCTATTACTCTTGGCCTCCTCTA GTACACTCTATATTTTTTTATGCCTCGGTAATGATTTTCATTTTTTTTTT TCCACCTAGCGGATGACTCTTTTTTTTTCTTAGCGATTGGCATTATCACA TAATGAATTATACATTATATAAAGTAATGTGATTTCTTCGAAGAATATAC TAAAAAATGAGCAGGCAAGATAAACGAAGGCAAAGATGACAGAGCAGAAA GCCCTAGTAAAGCGTATTACAAATGAAACCAAGATTCAGATTGCGATCTC TTTAAAGGGTGGTCCCCTAGCGATAGAGCACTCGATCTTCCCAGAAAAAG AGGCAGAAGCAGTAGCAGAACAGGCCACACAATCGCAAGTGATTAACGTC CACACAGGTATAGGGTTTCTGGACCATATGATACATGCTCTGGCCAAGCA TTCCGGCTGGTCGCTAATCGTTGAGTGCATTGGTGACTTACACATAGACG ACCATCACACCACTGAAGACTGCGGGATTGCTCTCGGTCAAGCTTTTAAA GAGGCCCTAGGGGCCGTGCGTGGAGTAAAAAGGTTTGGATCAGGATTTGC GCCTTTGGATGAGGCACTTTCCAGAGCGGTGGTAGATCTTTCGAACAGGC CGTACGCAGTTGTCGAACTTGGTTTGCAAAGGGAGAAAGTAGGAGATCTC TCTTGCGAGATGATCCCGCATTTTCTTGAAAGCTTTGCAGAGGCTAGCAG AATTACCCTCCACGTTGATTGTCTGCGAGGCAAGAATGATCATCACCGTA GTGAGAGTGCGTTCAAGGCTCTTGCGGTTGCCATAAGAGAAGCCACCTCG CCCAATGGTACCAACGATGTTCCCTCCACCAAAGGTGTTCTTATGTAGTG ACACCGATTATTTAAAGCTGCAGCATACGATATATATACATGTGTATATA TGTATACCTATGAATGTCAGTAAGTATGTATACGAACAGTATGATACTGA AGATGACAAGGTAATGCATCATTCTATACGTGTCATTCTGAACGAGGCGC GCTTTCCTTTTTTCTTTTTGCTTTTTCTTTTTTTTTCTCTTGAACTCGAA TAACTTCGTATAGCATACATTATACGAAGTTATCCCGGGTACCGAGCTCG AATTCGTATGATCCAATATCAAAGGAAATGATAGCATTGAAGGATGAGAC TAATCCAATTGAGGAGTGGCAGCATATAGAACAGCTAAAGGGTAGTGCTG AAGGAAGCATACGATACCCCGCATGGAATGGGATAATATCACAGGAGGTA CTAGACTACCTTTCATCCTACATAAATAGACGCATATAAGTACGCATTTA AGCATAAACACGCACTATGCCGTTCTTCTCATGTATATATATATACAGGC AACACGCAGATATAGGTGCGACGTGAACAGTGAGCTGTATGTGCGCAGCT CGCGTTGCATTTTCGGAAGCGCTCGTTTTCGGAAACGCTTTGAAGTTCCT ATTCCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCAGAGCGCTTTT GAAAACCAAAAGCGCTCTGAAGACGCACTTTCAAAAAACCAAAAACGCAC CGGACTGTAACGAGCTACTAAAATATTGCGAATACCGCTTCCACAAACAT TGCTCAAAAGTATCTCTTTGCTATATATCTCTGTGCTATATCCCTATATA ACCTACCCATCCACCTTTCGCTCCTTGAACTTGCATCTAAACTCGACCTC TACATTTTTTATGTTTATCTCTAGTATTACTCTTTAGACAAAAAAATTGT AGTAAGAACTATTCATAGAGTGAATCGAAAACAATACGAAAATGTAAACA TTTCCTATACGTAGTATATAGAGACAAAATAGAAGAAACCGTTCATAATT TTCTGACCAATGAAGAATCATCAACGCTATCACTTTCTGTTCACAAAGTA TGCGCAATCCACATCGGTATAGAATATAATCGGGGATGCCTTTATCTTGA AAAAATGCACCCGCAGCTTCGCTAGTAATCAGTAAACGCGGGAAGTGGAG TCAGGCTTTTTTTATGGAAGAGAAAATAGACACCAAAGTAGCCTTCTTCT AACCTTAACGGACCTACAGTGCAAAAAGTTATCAAGAGACTGCATTATAG AGCGCACAAAGGAGAAAAAAAGTAATCTAAGATGCTTTGTTAGAAAAATA GCGCTCTCGGGATGCATTTTTGTAGAACAAAAAAGAAGTATAGATTCTTT GTTGGTAAAATAGCGCTCTCGCGTTGCATTTCTGTTCTGTAAAAATGCAG CTCAGATTCTTTGTTTGAAAAATTAGCGCTCTCGCGTTGCATTTTTGTTT TACAAAAATGAAGCACAGATTCTTCGTTGGTAAAATAGCGCTTTCGCGTT GCATTTCTGTTCTGTAAAAATGCAGCTCAGATTCTTTGTTTGAAAAATTA GCGCTCTCGCGTTGCATTTTTGTTCTACAAAATGAAGCACAGATGCTTCG TTGAATTCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCC GCTCACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCT GGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGCGCTCACTG CCCGCTTTCCAGTCGGGAAACCTGTCGTGCCAGCTGCATTAATGAATCGG CCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCTTCCGCTTCCT CGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCA GCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAA AGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCAT CACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTC CGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGC GTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACC GCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACAC GACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCT ACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACC TTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAG GATCTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGG AACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT CTTCACCTAGATCCTTTTAAATTAAAAATGAAGTTTTAAATCAATCTAAA GTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAG GCACCTATCTCAGCGATCTGTCTATTTCGTTCATCCATAGTTGCCTGACT CCCCGTCGTGTAGATAACTACGATACGGGAGGGCTTACCATCTGGCCCCA GTGCTGCAATGATACCGCGAGACCCACGCTCACCGGCTCCAGATTTATCA GCAATAAACCAGCCAGCCGGAAGGGCCGAGCGCAGAAGTGGTCCTGCAAC TTTATCCGCCTCCATCCAGTCTATTAATTGTTGCCGGGAAGCTAGAGTAA GTAGTTCGCCAGTTAATAGTTTGCGCAACGTTGTTGCCATTGCTACAGGC ATCGTGGTGTCACGCTCGTCGTTTGGTATGGCTTCATTCAGCTCCGGTTC CCAACGATCAAGGCGAGTTACATGATCCCCCATGTTGTGCAAAAAAGCGG TTAGCTCCTTCGGTCCTCCGATCGTTGTCAGAAGTAAGTTGGCCGCAGTG TTATCACTCATGGTTATGGCAGCACTGCATAATTCTCTTACTGTCATGCC ATCCGTAAGATGCTTTTCTGTGACTGGTGAGTACTCAACCAAGTCATTCT GAGAATAGTGTATGCGGCGACCGAGTTGCTCTTGCCCGGCGTCAATACGG GATAATACCGCGCCACATAGCAGAACTTTAAAAGTGCTCATCATTGGAAA ACGTTCTTCGGGGCGAAAACTCTCAAGGATCTTACCGCTGTTGAGATCCA GTTCGATGTAACCCACTCGTGCACCCAACTGATCTTCAGCATCTTTTACT TTCACCAGCGTTTCTGGGTGAGCAAAAACAGGAAGGCAAAATGCCGCAAA AAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCATACTCTTCCTTT TTCAATATTACCGCGAATCCTTACATCACACCCAATCCCCCACAAGTGAT CCCCCACACACCATAGCTTCAAAATGTTTCTACTCCTTTTTTACTCTTCC AGATTTTCTCGGACTCCGCGCATCGCCGTACCACTTCAAAACACCCAAGC ACAGCATACTAAATTTCCCCTCTTTCTTCCTCTAGGGTGTCGTTAATTAC CCGTACTAAAGGTTTGGAAAAGAAAAAAGAGACCGCCTCGTTTCTTTTTC TTCGTCGAAAAAGGCAATAAAAATTTTTATCACGTTTCTTTTTCTTGAAA ATTTTTTTTTTTGATTTTTTTCTCTTTCGATGACCTCCCATTGATATTTA AGTTAATAAACGGTCTTCAATTTCTCAAGTTTCAGTTTCATTTTTCTTGT TCTATTACAACTTTTTTTACTTCTTGCTCATTAGAAAGAAAGCATAGCAA TCTAATCTAAGTTTTAATTACAAAACTAGTGATATCTGCGCACTCGAGTC ATGTAATTAGTTATGTCACGCTTACATTCACGCCCTCCCCCCACATCCGC TCTAACCGAAAAGGAAGGAGTTAGACAACCTGAAGTCTAGGTCCCTATTT ATTTTTTTATAGTTATGTTAGTATTAAGAACGTTATTTATATTTCAAATT TTTCTTTTTTTTCTGTACAGACGCGTGTACGCATGTAACATTATACTGAA AACCTTGCTTGAGAAGGTTTTGGGACGCTCGAAGGCTTTAATTTGCGGCC AATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACATA TTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTTCC CCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATTAA CCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTC ExemplaryEEVSProtein SEQIDNO.21 MERPGETFTVSSPEEVRLPSVHRDNSTMENHNKQETVFSLVQVKGTWKRK AGQNAKQGMKGRVSPAKIYESSSSSGTTWTVVTPITFTYTVTQTKNLLDP SNDTLLLGHIIDTQQLEAVRSNTKPLKRFIVMDEVVYNIYGSQVTEYLEA RNVLYRILPLPTTEENKSMDMALKILEEVHQFGIDRRTEPIIAIGGGVCL DIVGLAASLYRRRTPYIRVPTTLLSYIDASVGAKTGVNFANCKNKLGTYI APVAAFLDRSFIQSIPRRHIANGLAEMLKMALMKHRGLFELLEVHGQFLL DSKFQSASVLENDRIDPASVSTRVAIETMLEELAPNLWEDDLDRLVDFGH LISPQLEMKVLPALLHGEAVNIDMAYMVYVSCEIGLLTEEEKFRIICCMM GLELPVWHQDFTFALVQKSLCDRLQHSGGLVRMPLPTGLGRAEIFNDTDE GSLFRAYEKWCDELSTGSPQ ExemplaryMT-OxProtein SEQIDNO.22 MQTAKVSDTPVEFIVEHLLKAKEIAENHASIPVELRDNLQKALDIASGLD EYLEQMSSKESEPLTELYRKSVSHDWNKVHADGKTLFRLPVTCITGQVEG QVLKMLVHMSKAKRVLEIGMFTGYGALSMAEALPENGQLIACELEPYLKD FAQPIFDKSPHGKKITVKTGPAMDTLKELAATGEQFDMVFIDADKQNYIN YYKFLLDHNLLRIDGVICVDNTLFKGRVYLKDSVDEMGKALRDFNQFVTA DPRVEQVIIPLRDGLTIIRRVPYTPQPNSQSGTVTYDEVFRGVQGKPVLD RLRLDGKVAYVTGAGQGIGRAFAHALGEAGAKVAIIDMDRGKAEDVAHEL TLKGISSMAVVADISKPDDVQKMIDDIVTKWGTLHIACNNAGINKNSASE ETSLEEWDQTFNVNLRGTFMCCQAAGRVMLKQGYGKIINTASMASLIVPH PQKQLSYNTSKAGVVKLTQTLGTEWIDRGVRVNCISPGIVDTPLIHSESL EPLVQRWLSDIPAGRLAQVTDLQAAVVYLASDASDYMTGHNLVIEGGQSL W. SHB17,sedoheptulose1,7-bisphosphataseORFfrom S.cerevisiae SEQIDNO.77 ATGCCTTCGCTAACCCCCAGATGTATCATTGTCAGACACGGTCAAACTGA ATGGTCCAAGTCAGGCCAGTATACTGGTTTGACAGATCTACCGTTAACGC CCTACGGTGAGGGCCAAATGTTGAGGACCGGTGAGAGTGTTTTCCGCAAT AATCAGTTTTTGAATCCAGACAACATCACTTATATCTTCACCTCTCCACG TTTGCGTGCCAGGCAAACTGTGGATTTGGTTTTGAAACCATTAAGCGACG AGCAAAGAGCTAAGATCCGTGTGGTGGTAGACGACGACTTGCGAGAGTGG GAGTACGGTGACTACGAGGGAATGCTGACTCGAGAAATCATTGAATTGAG AAAGTCACGCGGTTTGGACAAGGAGAGGCCATGGAATATCTGGAGAGATG GGTGTGAGAACGGTGAGACTACTCAGCAAATTGGGTTGAGACTTTCCCGC GCTATTGCCAGAATCCAGAACTTGCACCGCAAGCACCAGAGTGAGGGCAG AGCATCAGACATCATGGTCTTTGCGCACGGACATGCATTGCGTTATTTTG CTGCTATTTGGTTTGGACTGGGTGTGCAAAAGAAGTGTGAGACGATTGAA GAAATTCAAAATGTCAAATCTTATGATGACGACACAGTTCCATATGTGAA ATTGGAATCTTACAGACATTTGGTAGACAATCCATGTTTCTTACTGGACG CCGGTGGGATTGGTGTTTTGTCATACGCTCACCACAACATTGACGAACCT GCATTGGAATTAGCAGGTCCATTTGTCTCACCACCAGAGGAGGAATCCCA GCATGGCGATGTGTAA ZWF1,glucose6-PdehydrogenaseORFfrom S.cerevisiae SEQIDNO.78 ATGAGTGAAGGCCCCGTCAAATTCGAAAAAAATACCGTCATATCTGTCTT TGGTGCGTCAGGTGATCTGGCAAAGAAGAAGACTTTTCCCGCCTTATTTG GGCTTTTCAGAGAAGGTTACCTTGATCCATCTACCAAGATCTTCGGTTAT GCCCGGTCCAAATTGTCCATGGAGGAGGACCTGAAGTCCCGTGTCCTACC CCACTTGAAAAAACCTCACGGTGAAGCCGATGACTCTAAGGTCGAACAGT TCTTCAAGATGGTCAGCTACATTTCGGGAAATTACGACACAGATGAAGGC TTCGACGAATTAAGAACGCAGATCGAGAAATTCGAGAAAAGTGCCAACGT CGATGTCCCACACCGTCTCTTCTATCTGGCCTTGCCGCCAGCGTTTTTTT GACGGTGGCCAAGCAGATCAAGAGTCGTGTGTACGCAGAGAATGGCATCA CCCGTGTAATCGTAGAGAAACCTTTCGGCCACGACCTGGCCTCTGCCAGG GAGCTGCAAAAAAACCTGGGGCCCCTCTTTAAAGAAGAAGAGTTGTACAG AATTGACCATTACTTGGGTAAAGAGTTGGTCAAGAATCTTTTAGTCTTGA GGTTCGGTAACCAGTTTTTGAATGCCTCGTGGAATAGAGACAACATTCAA AGCGTTCAGATTTCGTTTAAAGAGAGGTTCGGCACCGAAGGCCGTGGCGG CTATTTCGACTCTATAGGCATAATCAGAGACGTGATGCAGAACCATCTGT TACAAATCATGACTCTCTTGACTATGGAAAGACCGGTGTCTTTTGACCCG GAATCTATTCGTGACGAAAAGGTTAAGGTTCTAAAGGCCGTGGCCCCCAT CGACACGGACGACGTCCTCTTGGGCCAGTACGGTAAATCTGAGGACGGGT CTAAGCCCGCCTACGTGGATGATGACACTGTAGACAAGGACTCTAAATGT GTCACTTTTGCAGCAATGACTTTCAACATCGAAAACGAGCGTTGGGAGGG CGTCCCCATCATGATGCGTGCCGGTAAGGCTTTGAATGAGTCCAAGGTGG AGATCAGACTGCAGTACAAAGCGGTCGCATCGGGTGTCTTCAAAGACATT CCAAATAACGAACTGGTCATCAGAGTGCAGCCCGATGCCGCTGTGTACCT AAAGTTTAATGCTAAGACCCCTGGTCTGTCAAATGCTACCCAAGTCACAG ATCTGAATCTAACTTACGCAAGCAGGTACCAAGACTTTTGGATTCCAGAG GCTTACGAGGTGTTGATAAGAGACGCCCTACTGGGTGACCATTCCAACTT TGTCAGAGATGACGAATTGGATATCAGTTGGGGCATATTCACCCCATTAC TGAAGCACATAGAGCGTCCGGACGGTCCAACACCGGAAATTTACCCCTAC GGATCAAGAGGTCCAAAGGGATTGAAGGAATATATGCAAAAACACAAGTA TGTTATGCCCGAAAAGCACCCTTACGCTTGGCCCGTGACTAAGCCAGAAG ATACGAAGGATAATTAG SameasSEQIDNO.82exceptthata1,353bp EcoRIfragmentcontainingthe2sequencehas beenremoved pGH420-EEVS-MTOx-2 SEQIDNO.79 ACTATATGTGAAGGCATGGCTATGGCACGGCAGACATTCCGCCAGATCAT CAATAGGCACCTTCATTCAACGTTTCCCATTGTTTTTTTCTACTATTGCT TTGCTGTGGGAAAAACTTATCGAAAGATGACGACTTTTTCTTAATTCTCG TTTTAAGAGCTTGGTGAGCGCTAGGAGTCACTGCCAGGTATCGTTTGAAC ACGGCATTAGTCAGGGAAGTCATAACACAGTCCTTTCCCGCAATTTTCTT TTTCTATTACTCTTGGCCTCCTCTAGTACACTCTATATTTTTTTATGCCT CGGTAATGATTTTCATTTTTTTTTTTCCACCTAGCGGATGACTCTTTTTT TTTCTTAGCGATTGGCATTATCACATAATGAATTATACATTATATAAAGT AATGTGATTTCTTCGAAGAATATACTAAAAAATGAGCAGGCAAGATAAAC GAAGGCAAAGATGACAGAGCAGAAAGCCCTAGTAAAGCGTATTACAAATG AAACCAAGATTCAGATTGCGATCTCTTTAAAGGGTGGTCCCCTAGCGATA GAGCACTCGATCTTCCCAGAAAAAGAGGCAGAAGCAGTAGCAGAACAGGC CACACAATCGCAAGTGATTAACGTCCACACAGGTATAGGGTTTCTGGACC ATATGATACATGCTCTGGCCAAGCATTCCGGCTGGTCGCTAATCGTTGAG TGCATTGGTGACTTACACATAGACGACCATCACACCACTGAAGACTGCGG GATTGCTCTCGGTCAAGCTTTTAAAGAGGCCCTAGGGGCCGTGCGTGGAG TAAAAAGGTTTGGATCAGGATTTGCGCCTTTGGATGAGGCACTTTCCAGA GCGGTGGTAGATCTTTCGAACAGGCCGTACGCAGTTGTCGAACTTGGTTT GCAAAGGGAGAAAGTAGGAGATCTCTCTTGCGAGATGATCCCGCATTTTC TTGAAAGCTTTGCAGAGGCTAGCAGAATTACCCTCCACGTTGATTGTCTG CGAGGCAAGAATGATCATCACCGTAGTGAGAGTGCGTTCAAGGCTCTTGC GGTTGCCATAAGAGAAGCCACCTCGCCCAATGGTACCAACGATGTTCCCT CCACCAAAGGTGTTCTTATGTAGTGACACCGATTATTTAAAGCTGCAGCA TACGATATATATACATGTGTATATATGTATACCTATGAATGTCAGTAAGT ATGTATACGAACAGTATGATACTGAAGATGACAAGGTAATGCATCACACC TTTCGAGAGGACGATGCCCGTGTCTAAATGATTCGACCAGCCTAAGAATG TTCAACCCTGACTTCAACTCAAGACGCACAGATATTATAACATCTGCATA ATAGGCATTTGCAAGAATTACTCGTGAGTAAGGAAAGAGTGAGGAACTAT CGCATACCTGCATTTAAAGATGCCGATTTGGGCGCGAATCCTTTATTTTG GCTTCACCCTCATACTATTATCAGGGCCAGAAAAAGGAAGTGTTTCCCTC CTTCTTGAATTGATGTTACCCTCATAAAGCACGTGGCCTCTTATCGAGAA AGAAATTACCGTCGCTCGTGATTTGTTTGCAAAAAGAACAAAACTGAAAA AACCCAGACACGCTCGACTTCCTGTCTTCCTATTGATTGCAGCTTCCAAT TTCGTCACACAACAAGGTCCTAGCGACGGCTCACAGGTTTTGTAACAAGC AATCGAAGGTTCTGGAATGGCGGGAAAGGGTTTAGTACCACATGCTATGA TGCCCACTGTGATCTCCAGAGCAAAGTTCGTTCGATCGTACTGTTACTCT CTCTCTTTCAAACAGAATTGTCCGAATCGTGTGACAACAACAGCCTGTTC TCACACACTCTTTTCTTCTAACCAAGGGGGTGGTTTAGTTTAGTAGAACC TCGTGAAACTTACATTTACATATATATAAACTTGCATAAATTGGTCAATG CAAGAAATACATATTTGGTCTTTTCTAATTCGTAGTTTTTCAAGTTCTTA GATGCTTTCTTTTTCTCTTTTTTACAGATCATCAAGGAAGTAATTATCTA CTTTTTACAACAAATATAATGCAAACGGCAAAAGTCTCGGACACCCCGGT TGAATTTATTGTGGAACATCTGCTGAAGGCTAAGGAAATCGCTGAAAATC ACGCTTCCATTCCGGTGGAACTGCGCGATAACCTGCAGAAAGCTCTGGAT ATCGCGAGCGGCCTGGACGAATATCTGGAACAAATGAGCTCTAAAGAATC TGAACCGCTGACGGAACTGTACCGCAAGTCAGTCTCGCATGATTGGAATA AAGTGCACGCGGACGGCAAGACCCTGTTTCGTCTGCCGGTGACCTGCATT ACGGGCCAGGTCGAAGGTCAAGTGCTGAAAATGCTGGTTCACATGAGTAA AGCGAAGCGTGTCCTGGAAATTGGCATGTTTACCGGCTATGGTGCCCTGT CCATGGCAGAAGCTCTGCCGGAAAACGGTCAGCTGATCGCTTGTGAACTG GAACCGTACCTGAAAGATTTTGCACAACCGATTTTCGACAAGAGTCCGCA TGGCAAAAAGATCACCGTGAAAACGGGTCCGGCAATGGATACCCTGAAGG AACTGGCGGCCACGGGCGAACAGTTTGACATGGTTTTCATTGATGCGGAC AAGCAAAACTACATCAACTACTACAAGTTCCTGCTGGATCACAACCTGCT GCGTATTGATGGCGTCATCTGCGTGGACAATACGCTGTTCAAAGGTCGCG TGTACCTGAAGGATAGCGTTGACGAAATGGGTAAAGCCCTGCGTGATTTT AACCAGTTCGTGACCGCAGACCCGCGTGTTGAACAAGTCATTATCCCGCT GCGCGATGGCCTGACCATTATCCGTCGCGTCCCGTATACGCCGCAGCCGA ATAGCCAATCTGGTACCGTGACGTACGATGAAGTTTTTCGCGGCGTCCAG GGTAAACCGGTTCTGGATCGTCTGCGCCTGGACGGCAAAGTGGCTTATGT TACCGGTGCCGGTCAGGGTATTGGTCGTGCATTCGCCCATGCACTGGGCG AAGCTGGTGCGAAAGTTGCCATTATCGATATGGACCGTGGCAAGGCCGAA GATGTCGCACACGAACTGACCCTGAAAGGTATTAGTTCCATGGCCGTGGT TGCAGATATCAGCAAACCGGATGACGTGCAGAAGATGATTGATGACATCG TTACCAAATGGGGCACGCTGCATATTGCTTGCAACAATGCGGGTATCAAC AAAAATAGTGCGTCCGAAGAAACCTCTCTGGAAGAATGGGATCAGACGTT TAACGTCAATCTGCGTGGCACCTTCATGTGCTGTCAGGCAGCTGGTCGCG TTATGCTGAAACAAGGCTATGGCAAGATTATCAACACCGCTAGCATGGCG TCTCTGATTGTGCCGCACCCGCAGAAACAACTGTCATACAATACGTCGAA AGCCGGCGTCGTGAAGCTGACCCAGACGCTGGGCACCGAATGGATCGATC GTGGTGTGCGCGTTAACTGTATTTCACCGGGTATCGTGGATACCCCGCTG ATTCATTCAGAATCGCTGGAACCGCTGGTTCAGCGTTGGCTGTCGGATAT CCCGGCAGGTCGTCTGGCACAGGTGACGGACCTGCAAGCGGCCGTTGTCT ATCTGGCCAGTGATGCATCCGACTACATGACCGGTCACAATCTGGTTATT GAAGGCGGTCAGTCTCTGTGGTGAATTGAATTGAATTGAAATCGATAGAT CAATTTTTTTCTTTTCTCTTTCCCCATCCTTTACGCTAAAATAATAGTTT ATTTTATTTTTTGAATATTTTTTATTTATATACGTATATATAGACTATTA TTTATCTTTTAATGATTATTAAGATTTTTATTAAAAAAAAATTCGCTCCT CTTTTAATGCCTTTATGCAGTTTTTTTTTCCCATTCGATATTTCTATGTT CGGGTTCAGCGTATTTTAAGTTTAATAACTCGAAAATTCTGCGTTCGTTA AAGCTTTCGAGAAGGATATTATTTCGAAATAAACCGTGTTGTGTAAGCTT GAAGCCTTTTTGCGCTGCCAATATTCTTATCCATCTATTGTACTCTTTAG ATCCAGTATAGTGTATTCTTCCTGCTCCAAGCTCATCCCACTTGCAACAA AATATTCACGTAGACGGATAGGTATAGCCAGACATCAGCAGCATACTTCG GGAACCGTAGGCGAATTCCATACGTTGAAACTACGGCAAAGGATTGGTCA GATCGCTTCATACAGGGAAAGTTCGGCAaaaggcggtaatacggttatcc acagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagca aaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggc tccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtgg cgaaacccgacaggactataaagataccaggcgtttccccctggaagctc cctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccg cctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtagg tatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacga accccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttg agtccaacccggtaagacacgacttatcgccactggcagcagccactggt aacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaa gtggtggcctaactacggctacactagaaggacagtatttggtatctgcg ctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatcc ggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagca gattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttttcta cggggtctgacgctcagtggaacgaaaactcacgttaagggattttggtc atgagattatcaaaaaggatcttcacctagatccttttaaattaaaaatg aagttttaaatcaatctaaagtatatatgagtaaacttggtctgacagtt accaatgcttaatcagtgaggcacctatctcagcgatctgtctatttcgt tcatccatagttgcctgactccccgtcgtgtagataactacgatacggga gggcttaccatctggccccagtgctgcaatgataccgcgagacccacgct caccggctccagatttatcagcaataaaccagccagccggaagggccgag cgcagaagtggtcctgcaactttatccgcctccatccagtctattaattg ttgccgggaagctagagtaagtagttcgccagttaatagtttgcgcaacg ttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggtatg gcttcattcagctccggttcccaacgatcaaggcgagttacatgatcccc catgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttgtca gaagtaagttggccgcagtgttatcactcatggttatggcagcactgcat aattctcttactgtcatgccatccgtaagatgcttttctgtgactggtga gtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagttgct cttgcccggcgtcaatacgggataataccgcgccacatagcagaacttta aaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaaggat cttaccgctgttgagatccagttcgatgtaacccactcgtgcacccaact gatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaaaca ggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatgttg aatactcatactcttcctttttcAGATTACTCTAACGCCTCAGCCATCAT CGGTAATAGCTCGAATTGCTGAGAACCCGTGACACCGCGAATCCTTACAT CACACCCAATCCCCCACAAGTGATCCCCCACACACCATAGCTTCAAAATG TTTCTACTCCTTTTTTACTCTTCCAGATTTTCTCGGACTCCGCGCATCGC CGTACCACTTCAAAACACCCAAGCACAGCATACTAAATTTCCCCTCTTTC TTCCTCTAGGGTGTCGTTAATTACCCGTACTAAAGGTTTGGAAAAGAAAA AAGAGACCGCCTCGTTTCTTTTTCTTCGTCGAAAAAGGCAATAAAAATTT TTATCACGTTTCTTTTTCTTGAAAATTTTTTTTTTTGATTTTTTTCTCTT TCGATGACCTCCCATTGATATTTAAGTTAATAAACGGTCTTCAATTTCTC AAGTTTCAGTTTCATTTTTCTTGTTCTATTACAACTTTTTTTACTTCTTG CTCATTAGAAAGAAAGCATAGCAATCTAATCTAAGTTTTAATTACAAAAC TAGTATGGAACGTCCGGGCGAAACCTTTACCGTCAGCTCCCCGGAAGAAG TGCGTCTGCCGTCTGTTCACCGCGATAACTCAACGATGGAAAACCATAAT AAACAGGAAACGGTGTTTTCTCTGGTTCAAGTCAAGGGTACCTGGAAGCG TAAGGCGGGCCAGAACGCCAAACAGGGTATGAAGGGCCGCGTTAGTCCGG CCAAAATTTATGAAAGCTCTAGTTCCTCAGGTACCACGTGGACGGTGGTT ACCCCGATCACCTTTACGTACACCGTGACGCAGACCAAAAACCTGCTGGA CCCGTCGAACGACACGCTGCTGCTGGGCCATATTATCGATACCCAGCAAC TGGAAGCTGTCCGCAGCAATACGAAACCGCTGAAGCGTTTCATTGTGATG GACGAAGTCGTGTATAATATCTACGGTTCCCAAGTCACCGAATATCTGGA AGCGCGCAACGTGCTGTACCGTATTCTGCCGCTGCCGACCACGGAAGAAA ATAAATCAATGGATATGGCTCTGAAGATTCTGGAAGAAGTGCACCAGTTT GGTATCGACCGTCGCACCGAACCGATTATCGCGATTGGCGGTGGCGTTTG CCTGGATATCGTCGGTCTGGCAGCCTCTCTGTATCGTCGCCGTACCCCGT ACATTCGTGTGCCGACCACGCTGCTGTCTTATATCGACGCAAGTGTGGGT GCTAAAACGGGCGTTAACTTTGCTAATTGTAAAAACAAGCTGGGTACCTA CATTGCGCCGGTTGCAGCTTTTCTGGATCGTTCGTTCATTCAGAGCATCC CGCGCCGTCACATCGCAAACGGTCTGGCCGAAATGCTGAAAATGGCCCTG ATGAAGCATCGCGGTCTGTTCGAACTGCTGGAAGTTCACGGCCAGTTTCT GCTGGATAGTAAATTCCAATCGGCAAGCGTCCTGGAAAACGATCGCATTG ACCCGGCCTCTGTCAGTACGCGTGTGGCAATCGAAACCATGCTGGAAGAA CTGGCCCCGAATCTGTGGGAAGATGACCTGGATCGTCTGGTGGACTTTGG TCATCTGATTTCGCCGCAGCTGGAAATGAAAGTTCTGCCGGCACTGCTGC ACGGCGAAGCTGTCAACATTGATATGGCGTATATGGTGTACGTTTCATGC GAAATCGGTCTGCTGACCGAAGAAGAAAAATTCCGCATTATCTGCTGTAT GATGGGCCTGGAACTGCCGGTGTGGCATCAGGATTTTACCTTCGCACTGG TTCAAAAGTCCCTGTGTGACCGCCTGCAGCACTCAGGTGGCCTGGTTCGT ATGCCGCTGCCGACGGGTCTGGGTCGTGCAGAAATTTTTAATGATACCGA CGAAGGTAGCCTGTTCCGCGCGTATGAAAAATGGTGCGATGAACTGTCCA CCGGCTCACCGCAGTGACTCGAGTCATGTAATTAGTTATGTCACGCTTAC ATTCACGCCCTCCCCCCACATCCGCTCTAACCGAAAAGGAAGGAGTTAGA CAACCTGAAGTCTAGGTCCCTATTTATTTTTTTATAGTTATGTTAGTATT AAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAGACGCG TGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTTGGGA CGCTCGAAGGCTTTAATTTGCGGCCAATATTATTGAAGCATTTATCAGGG TTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATAAAC AAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTCTAA GAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCACGAG GCCCTTTCGTCTCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGACACA TGCAGCTCCCGGAGACGGTCACAGCTTGTCTG pXP416-SHB17-2 SEQIDNO.80 tcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccg gagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccg tcagggcgcgtcagcgggtgttggcgggtgtcggggctggcttaactatg cggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaata ccgcacagatgcgtaaggagaaaataccgcatcaggcgccattcgccatt caggctgcgcaactgttgggaagggcgatcggtgcgggcctcttcgctat tacgccagctggcgaaagggggatgtgctgcaaggcgattaagttgggta acgccagggttttcccagtcacgacgttgtaaaacgacggccagtgccaa gcttgcatgcctgcaggtcgactctagaggatcCCCGGGATAACTTCGTA TAGCATACATTATACGAAGTTATAACGACATTACTATATATATAATATAG GAAGCATTTAATAGAACAGCATCGTAATATATGTGTACTTTGCAGTTATG ACGCCAGATGGCAGTAGTGGAAGATATTCTTTATTGAAAAATAGCTTGTC ACCTTACGTACAATCTTGATCCGGAGCTTTTCTTTTTTTGCCGATTAAGA ATTAATTCGGTCGAAAAAAGAAAAGGAGAGGGCCAAGAGGGAGGGCATTG GTGACTATTGAGCACGTGAGTATACGTGATTAAGCACACAAAGGCAGCTT GGAGTATGTCTGTTATTAATTTCACAGGTAGTTCTGGTCCATTGGTGAAA GTTTGCGGCTTGCAGAGCACAGAGGCCGCAGAATGTGCTCTAGATTCCGA TGCTGACTTGCTGGGTATTATATGTGTGCCCAATAGAAAGAGAACAATTG ACCCGGTTATTGCAAGGAAAATTTCAAGTCTTGTAAAAGCATATAAAAAT AGTTCAGGCACTCCGAAATACTTGGTTGGCGTGTTTCGTAATCAACCTAA GGAGGATGTTTTGGCTCTGGTCAATGATTACGGCATTGATATCGTCCAAC TGCATGGAGATGAGTCGTGGCAAGAATACCAAGAGTTCCTCGGTTTGCCA GTTATTAAAAGACTCGTATTTCCAAAAGACTGCAACATACTACTCAGTGC AGCTTCACAGAAACCTCATTCGTTTATTCCCTTGTTTGATTCAGAAGCAG GTGGGACAGGTGAACTTTTGGATTGGAACTCGATTTCTGACTGGGTTGGA AGGCAAGAGAGCCCCGAAAGCTTACATTTTATGTTAGCTGGTGGACTGAC GCCAGAAAATGTTGGTGATGCGCTTAGATTAAATGGCGTTATTGGTGTTG ATGTAAGCGGAGGTGTGGAGACAAATGGTGTAAAAGACTCTAACAAAATA GCAAATTTCGTCAAAAATGCTAAGAAATAGGTTATTACTGAGTAGTATTT ATTTAAGTATTGTTTGTGCACTTGCCTGATAACTTCGTATAGCATACATT ATACGAAGTTATCCCGGGtaccgagctcGAATTCgtaatcatggtcatag ctgtttcctgtgtgaaattgttatccgctcacaattccacacaacatacg agccggaagcataaagtgtaaagcctggggtgcctaatgagtgagctaac tcacattaattgcgttgcgctcactgcccgctttccagtcgggaaacctg tcgtgccagctgcattaatgaatcggccaacgcgcggggagaggcggttt gcgtattgggcgctcttccgcttcctcgctcactgactcgctgcgctcgg tcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacgg ttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaagg ccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttcc ataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcag aggtggcgaaacccgacaggactataaagataccaggcgtttccccctgg aagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacc tgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgc tgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgt gcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatc gtcttgagtccaacccggtaagacacgacttatcgccactggcagcagcc actggtaacaggattagcagagcgaggtatgtaggcggtgctacagagtt cttgaagtggtggcctaactacggctacactagaaggacagtatttggta tctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctct tgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaa gcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatct tttctacggggtctgacgctcagtggaacgaaaactcacgttaagggatt ttggtcatgagattatcaaaaaggatcttcacctagatccttttaaatta aaaatgaagttttaaatcaatctaaagtatatatgagtaaacttggtctg acagttaccaatgcttaatcagtgaggcacctatctcagcgatctgtcta tttcgttcatccatagttgcctgactccccgtcgtgtagataactacgat acgggagggcttaccatctggccccagtgctgcaatgataccgcgagacc cacgctcaccggctccagatttatcagcaataaaccagccagccggaagg gccgagcgcagaagtggtcctgcaactttatccgcctccatccagtctat taattgttgccgggaagctagagtaagtagttcgccagttaatagtttgc gcaacgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgttt ggtatggcttcattcagctccggttcccaacgatcaaggcgagttacatg atcccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcg ttgtcagaagtaagttggccgcagtgttatcactcatggttatggcagca ctgcataattctcttactgtcatgccatccgtaagatgcttttctgtgac tggtgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccga gttgctcttgcccggcgtcaatacgggataataccgcgccacatagcaga actttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctc aaggatcttaccgctgttgagatccagttcgatgtaacccactcgtgcac ccaactgatcttcagcatcttttactttcaccagcgtttctgggtgagca aaaacaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaa atgttgaatactcatactcttcctttttcAATATTACCGCGAATCCTTAC ATCACACCCAATCCCCCACAAGTGATCCCCCACACACCATAGCTTCAAAA TGTTTCTACTCCTTTTTTACTCTTCCAGATTTTCTCGGACTCCGCGCATC GCCGTACCACTTCAAAACACCCAAGCACAGCATACTAAATTTCCCCTCTT TCTTCCTCTAGGGTGTCGTTAATTACCCGTACTAAAGGTTTGGAAAAGAA AAAAGAGACCGCCTCGTTTCTTTTTCTTCGTCGAAAAAGGCAATAAAAAT TTTTATCACGTTTCTTTTTCTTGAAAATTTTTTTTTTTGATTTTTTTCTC TTTCGATGACCTCCCATTGATATTTAAGTTAATAAACGGTCTTCAATTTC TCAAGTTTCAGTTTCATTTTTCTTGTTCTATTACAACTTTTTTTACTTCT TGCTCATTAGAAAGAAAGCATAGCAATCTAATCTAAGTTTTAATTACAAA ACTAGTATGCCTTCGCTAACCCCCAGATGTATCATTGTCAGACACGGTCA AACTGAATGGTCCAAGTCAGGCCAGTATACTGGTTTGACAGATCTACCGT TAACGCCCTACGGTGAGGGCCAAATGTTGAGGACCGGTGAGAGTGTTTTC CGCAATAATCAGTTTTTGAATCCAGACAACATCACTTATATCTTCACCTC TCCACGTTTGCGTGCCAGGCAAACTGTGGATTTGGTTTTGAAACCATTAA GCGACGAGCAAAGAGCTAAGATCCGTGTGGTGGTAGACGACGACTTGCGA GAGTGGGAGTACGGTGACTACGAGGGAATGCTGACTCGAGAAATCATTGA ATTGAGAAAGTCACGCGGTTTGGACAAGGAGAGGCCATGGAATATCTGGA GAGATGGGTGTGAGAACGGTGAGACTACTCAGCAAATTGGGTTGAGACTT TCCCGCGCTATTGCCAGAATCCAGAACTTGCACCGCAAGCACCAGAGTGA GGGCAGAGCATCAGACATCATGGTCTTTGCGCACGGACATGCATTGCGTT ATTTTGCTGCTATTTGGTTTGGACTGGGTGTGCAAAAGAAGTGTGAGACG ATTGAAGAAATTCAAAATGTCAAATCTTATGATGACGACACAGTTCCATA TGTGAAATTGGAATCTTACAGACATTTGGTAGACAATCCATGTTTCTTAC TGGACGCCGGTGGGATTGGTGTTTTGTCATACGCTCACCACAACATTGAC GAACCTGCATTGGAATTAGCAGGTCCATTTGTCTCACCACCAGAGGAGGA ATCCCAGCATGGCGATGTGTAACTCGAGTCATGTAATTAGTTATGTCACG CTTACATTCACGCCCTCCCCCCACATCCGCTCTAACCGAAAAGGAAGGAG TTAGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTATAGTTATGTTA GTATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAG ACGCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTT TGGGACGCTCGAAGGCTTTAATTTGCGGCCAATATTattgaagcatttat cagggttattgtctcatgagcggatacatatttgaatgtatttagaaaaa taaacaaataggggttccgcgcacatttccccgaaaagtgccacctgacg tctaagaaaccattattatcatgacattaacctataaaaataggcgtatc acgaggccctttcgtc PHO13=YDL236WSGDID:S000002395,chrIV: 32296..33234 SEQIDNO.81 ATGACTGCTCAACAAGGTGTACCAATAAAGATAACCAATAAGGAGATTGC TCAAGAATTCTTGGACAAATATGACACGTTTCTGTTCGATTGTGATGGTG TATTATGGTTAGGTTCTCAAGCATTACCATACACCCTGGAAATTCTAAAC CTTTTGAAGCAATTGGGCAAACAACTGATCTTCGTTACGAATAACTCTAC CAAGTCCCGTTTAGCATACACGAAAAAGTTTGCTTCGTTTGGTATTGATG TCAAAGAAGAACAGATTTTCACCTCTGGTTATGCGTCAGCTGTTTATATT CGTGACTTTCTGAAATTGCAGCCTGGCAAAGATAAGGTATGGGTATTTGG AGAAAGCGGTATTGGTGAAGAATTGAAACTAATGGGGTACGAATCTCTAG GAGGTGCCGATTCCAGATTGGATACGCCGTTCGATGCAGCTAAATCACCA TTTTTGGTGAACGGCCTTGATAAGGATGTTAGTTGTGTTATTGCTGGGTT AGACACGAAGGTAAATTACCACCGTTTGGCTGTTACACTGCAGTATTTGC AGAAGGATTCTGTTCACTTTGTTGGTACAAATGTTGATTCTACTTTCCCG CAAAAGGGTTATACATTTCCCGGTGCAGGCTCCATGATTGAATCATTGGC ATTCTCATCTAATAGGAGGCCATCGTACTGTGGTAAGCCAAATCAAAATA TGCTAAACAGCATTATATCGGCATTCAACCTGGATAGATCAAAGTGCTGT ATGGTTGGTGACAGATTAAACACCGATATGAAATTCGGTGTTGAAGGTGG GTTAGGTGGCACACTACTCGTTTTGAGTGGTATTGAAACCGAAGAGAGAG CCTTGAAGATTTCGCACGATTATCCAAGACCTAAATTTTACATTGATAAA CTTGGTGACATCTACACCTTAACCAATAATGAGTTATAG SameasSEQIDNO.79withtheadditionofa 1,353bpEcoRIfragmentcontainingthe2sequence pGH420-EEVS-MTOx SEQIDNO.82 ACTATATGTGAAGGCATGGCTATGGCACGGCAGACATTCCGCCAGATCAT CAATAGGCACCTTCATTCAACGTTTCCCATTGTTTTTTTCTACTATTGCT TTGCTGTGGGAAAAACTTATCGAAAGATGACGACTTTTTCTTAATTCTCG TTTTAAGAGCTTGGTGAGCGCTAGGAGTCACTGCCAGGTATCGTTTGAAC ACGGCATTAGTCAGGGAAGTCATAACACAGTCCTTTCCCGCAATTTTCTT TTTCTATTACTCTTGGCCTCCTCTAGTACACTCTATATTTTTTTATGCCT CGGTAATGATTTTCATTTTTTTTTTTCCACCTAGCGGATGACTCTTTTTT TTTCTTAGCGATTGGCATTATCACATAATGAATTATACATTATATAAAGT AATGTGATTTCTTCGAAGAATATACTAAAAAATGAGCAGGCAAGATAAAC GAAGGCAAAGATGACAGAGCAGAAAGCCCTAGTAAAGCGTATTACAAATG AAACCAAGATTCAGATTGCGATCTCTTTAAAGGGTGGTCCCCTAGCGATA GAGCACTCGATCTTCCCAGAAAAAGAGGCAGAAGCAGTAGCAGAACAGGC CACACAATCGCAAGTGATTAACGTCCACACAGGTATAGGGTTTCTGGACC ATATGATACATGCTCTGGCCAAGCATTCCGGCTGGTCGCTAATCGTTGAG TGCATTGGTGACTTACACATAGACGACCATCACACCACTGAAGACTGCGG GATTGCTCTCGGTCAAGCTTTTAAAGAGGCCCTAGGGGCCGTGCGTGGAG TAAAAAGGTTTGGATCAGGATTTGCGCCTTTGGATGAGGCACTTTCCAGA GCGGTGGTAGATCTTTCGAACAGGCCGTACGCAGTTGTCGAACTTGGTTT GCAAAGGGAGAAAGTAGGAGATCTCTCTTGCGAGATGATCCCGCATTTTC TTGAAAGCTTTGCAGAGGCTAGCAGAATTACCCTCCACGTTGATTGTCTG CGAGGCAAGAATGATCATCACCGTAGTGAGAGTGCGTTCAAGGCTCTTGC GGTTGCCATAAGAGAAGCCACCTCGCCCAATGGTACCAACGATGTTCCCT CCACCAAAGGTGTTCTTATGTAGTGACACCGATTATTTAAAGCTGCAGCA TACGATATATATACATGTGTATATATGTATACCTATGAATGTCAGTAAGT ATGTATACGAACAGTATGATACTGAAGATGACAAGGTAATGCATCACACC TTTCGAGAGGACGATGCCCGTGTCTAAATGATTCGACCAGCCTAAGAATG TTCAACCCTGACTTCAACTCAAGACGCACAGATATTATAACATCTGCATA ATAGGCATTTGCAAGAATTACTCGTGAGTAAGGAAAGAGTGAGGAACTAT CGCATACCTGCATTTAAAGATGCCGATTTGGGCGCGAATCCTTTATTTTG GCTTCACCCTCATACTATTATCAGGGCCAGAAAAAGGAAGTGTTTCCCTC CTTCTTGAATTGATGTTACCCTCATAAAGCACGTGGCCTCTTATCGAGAA AGAAATTACCGTCGCTCGTGATTTGTTTGCAAAAAGAACAAAACTGAAAA AACCCAGACACGCTCGACTTCCTGTCTTCCTATTGATTGCAGCTTCCAAT TTCGTCACACAACAAGGTCCTAGCGACGGCTCACAGGTTTTGTAACAAGC AATCGAAGGTTCTGGAATGGCGGGAAAGGGTTTAGTACCACATGCTATGA TGCCCACTGTGATCTCCAGAGCAAAGTTCGTTCGATCGTACTGTTACTCT CTCTCTTTCAAACAGAATTGTCCGAATCGTGTGACAACAACAGCCTGTTC TCACACACTCTTTTCTTCTAACCAAGGGGGTGGTTTAGTTTAGTAGAACC TCGTGAAACTTACATTTACATATATATAAACTTGCATAAATTGGTCAATG CAAGAAATACATATTTGGTCTTTTCTAATTCGTAGTTTTTCAAGTTCTTA GATGCTTTCTTTTTCTCTTTTTTACAGATCATCAAGGAAGTAATTATCTA CTTTTTACAACAAATATAATGCAAACGGCAAAAGTCTCGGACACCCCGGT TGAATTTATTGTGGAACATCTGCTGAAGGCTAAGGAAATCGCTGAAAATC ACGCTTCCATTCCGGTGGAACTGCGCGATAACCTGCAGAAAGCTCTGGAT ATCGCGAGCGGCCTGGACGAATATCTGGAACAAATGAGCTCTAAAGAATC TGAACCGCTGACGGAACTGTACCGCAAGTCAGTCTCGCATGATTGGAATA AAGTGCACGCGGACGGCAAGACCCTGTTTCGTCTGCCGGTGACCTGCATT ACGGGCCAGGTCGAAGGTCAAGTGCTGAAAATGCTGGTTCACATGAGTAA AGCGAAGCGTGTCCTGGAAATTGGCATGTTTACCGGCTATGGTGCCCTGT CCATGGCAGAAGCTCTGCCGGAAAACGGTCAGCTGATCGCTTGTGAACTG GAACCGTACCTGAAAGATTTTGCACAACCGATTTTCGACAAGAGTCCGCA TGGCAAAAAGATCACCGTGAAAACGGGTCCGGCAATGGATACCCTGAAGG AACTGGCGGCCACGGGCGAACAGTTTGACATGGTTTTCATTGATGCGGAC AAGCAAAACTACATCAACTACTACAAGTTCCTGCTGGATCACAACCTGCT GCGTATTGATGGCGTCATCTGCGTGGACAATACGCTGTTCAAAGGTCGCG TGTACCTGAAGGATAGCGTTGACGAAATGGGTAAAGCCCTGCGTGATTTT AACCAGTTCGTGACCGCAGACCCGCGTGTTGAACAAGTCATTATCCCGCT GCGCGATGGCCTGACCATTATCCGTCGCGTCCCGTATACGCCGCAGCCGA ATAGCCAATCTGGTACCGTGACGTACGATGAAGTTTTTCGCGGCGTCCAG GGTAAACCGGTTCTGGATCGTCTGCGCCTGGACGGCAAAGTGGCTTATGT TACCGGTGCCGGTCAGGGTATTGGTCGTGCATTCGCCCATGCACTGGGCG AAGCTGGTGCGAAAGTTGCCATTATCGATATGGACCGTGGCAAGGCCGAA GATGTCGCACACGAACTGACCCTGAAAGGTATTAGTTCCATGGCCGTGGT TGCAGATATCAGCAAACCGGATGACGTGCAGAAGATGATTGATGACATCG TTACCAAATGGGGCACGCTGCATATTGCTTGCAACAATGCGGGTATCAAC AAAAATAGTGCGTCCGAAGAAACCTCTCTGGAAGAATGGGATCAGACGTT TAACGTCAATCTGCGTGGCACCTTCATGTGCTGTCAGGCAGCTGGTCGCG TTATGCTGAAACAAGGCTATGGCAAGATTATCAACACCGCTAGCATGGCG TCTCTGATTGTGCCGCACCCGCAGAAACAACTGTCATACAATACGTCGAA AGCCGGCGTCGTGAAGCTGACCCAGACGCTGGGCACCGAATGGATCGATC GTGGTGTGCGCGTTAACTGTATTTCACCGGGTATCGTGGATACCCCGCTG ATTCATTCAGAATCGCTGGAACCGCTGGTTCAGCGTTGGCTGTCGGATAT CCCGGCAGGTCGTCTGGCACAGGTGACGGACCTGCAAGCGGCCGTTGTCT ATCTGGCCAGTGATGCATCCGACTACATGACCGGTCACAATCTGGTTATT GAAGGCGGTCAGTCTCTGTGGTGAATTGAATTGAATTGAAATCGATAGAT CAATTTTTTTCTTTTCTCTTTCCCCATCCTTTACGCTAAAATAATAGTTT ATTTTATTTTTTGAATATTTTTTATTTATATACGTATATATAGACTATTA TTTATCTTTTAATGATTATTAAGATTTTTATTAAAAAAAAATTCGCTCCT CTTTTAATGCCTTTATGCAGTTTTTTTTTCCCATTCGATATTTCTATGTT CGGGTTCAGCGTATTTTAAGTTTAATAACTCGAAAATTCTGCGTTCGTTA AAGCTTTCGAGAAGGATATTATTTCGAAATAAACCGTGTTGTGTAAGCTT GAAGCCTTTTTGCGCTGCCAATATTCTTATCCATCTATTGTACTCTTTAG ATCCAGTATAGTGTATTCTTCCTGCTCCAAGCTCATCCCACTTGCAACAA AATATTCACGTAGACGGATAGGTATAGCCAGACATCAGCAGCATACTTCG GGAACCGTAGGCGAATTCaacgaagcatctgtgcttcattttgtagaaca aaaatgcaacgcgagagcgctaatttttcaaacaaagaatctgagctgca tttttacagaacagaaatgcaacgcgaaagcgctattttaccaacgaaga atctgtgcttcatttttgtaaaacaaaaatgcaacgcgagagcgctaatt tttcaaacaaagaatctgagctgcatttttacagaacagaaatgcaacgc gagagcgctattttaccaacaaagaatctatacttcttttttgttctaca aaaatgcatcccgagagcgctatttttctaacaaagcatcttagattact ttttttctcctttgtgcgctctataatgcagtctcttgataactttttgc actgtaggtccgttaaggttagaagaaggctactttggtgtctattttct cttccataaaaaaagcctgactccacttcccgcgtttactgattactagc gaagctgcgggtgcattttttcaagataaaggcatccccgattatattct ataccgatgtggattgcgcatactttgtgaacagaaagtgatagcgttga tgattcttcattggtcagaaaattatgaacggtttcttctattttgtctc tatatactacgtataggaaatgtttacattttcgtattgttttcgattca ctctatgaatagttcttactacaatttttttgtctaaagagtaatactag agataaacataaaaaatgtagaggtcgagtttagatgcaagttcaaggag cgaaaggtggatgggtaggttatatagggatatagcacagagatatatag caaagagatacttttgagcaatgtttgtggaagcggtattcgcaatattt tagtagctcgttacagtccggtgcgtttttggttttttgaaagtgcgtct tcagagcgcttttggttttcaaaagcgctctgaagttcctatactttcta gagaataggaacttcggaataggaacttcaaagcgtttccgaaaacgagc gcttccgaaaatgcaacgcgagctgcgcacatacagctcactgttcacgt cgcacctatatctgcgtgttgcctgtatatatatatacatgagaagaacg gcatagtgcgtgtttatgcttaaatgcgtacttatatgcgtctatttatg taggatgaaaggtagtctagtacctcctgtgatattatcccattccatgc ggggtatcgtatgcttccttcagcactaccctttagctgttctatatgct gccactcctcaattggattagtctcatccttcaatgctatcatttccttt gatattggatcatacGAATTCCATACGTTGAAACTACGGCAAAGGATTGG TCAGATCGCTTCATACAGGGAAAGTTCGGCAaaaggcggtaatacggtta tccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggcca gcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccata ggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagagg tggcgaaacccgacaggactataaagataccaggcgtttccccctggaag ctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgt ccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgt aggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgca cgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtc ttgagtccaacccggtaagacacgacttatcgccactggcagcagccact ggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttctt gaagtggtggcctaactacggctacactagaaggacagtatttggtatct gcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttga tccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagca gcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatctttt ctacggggtctgacgctcagtggaacgaaaactcacgttaagggattttg gtcatgagattatcaaaaaggatcttcacctagatccttttaaattaaaa atgaagttttaaatcaatctaaagtatatatgagtaaacttggtctgaca gttaccaatgcttaatcagtgaggcacctatctcagcgatctgtctattt cgttcatccatagttgcctgactccccgtcgtgtagataactacgatacg ggagggcttaccatctggccccagtgctgcaatgataccgcgagacccac gctcaccggctccagatttatcagcaataaaccagccagccggaagggcc gagcgcagaagtggtcctgcaactttatccgcctccatccagtctattaa ttgttgccgggaagctagagtaagtagttcgccagttaatagtttgcgca acgttgttgccattgctacaggcatcgtggtgtcacgctcgtcgtttggt atggcttcattcagctccggttcccaacgatcaaggcgagttacatgatc ccccatgttgtgcaaaaaagcggttagctccttcggtcctccgatcgttg tcagaagtaagttggccgcagtgttatcactcatggttatggcagcactg cataattctcttactgtcatgccatccgtaagatgcttttctgtgactgg tgagtactcaaccaagtcattctgagaatagtgtatgcggcgaccgagtt gctcttgcccggcgtcaatacgggataataccgcgccacatagcagaact ttaaaagtgctcatcattggaaaacgttcttcggggcgaaaactctcaag gatcttaccgctgttgagatccagttcgatgtaacccactcgtgcaccca actgatcttcagcatcttttactttcaccagcgtttctgggtgagcaaaa acaggaaggcaaaatgccgcaaaaaagggaataagggcgacacggaaatg ttgaatactcatactcttcctttttcAGATTACTCTAACGCCTCAGCCAT CATCGGTAATAGCTCGAATTGCTGAGAACCCGTGACACCGCGAATCCTTA CATCACACCCAATCCCCCACAAGTGATCCCCCACACACCATAGCTTCAAA ATGTTTCTACTCCTTTTTTACTCTTCCAGATTTTCTCGGACTCCGCGCAT CGCCGTACCACTTCAAAACACCCAAGCACAGCATACTAAATTTCCCCTCT TTCTTCCTCTAGGGTGTCGTTAATTACCCGTACTAAAGGTTTGGAAAAGA AAAAAGAGACCGCCTCGTTTCTTTTTCTTCGTCGAAAAAGGCAATAAAAA TTTTTATCACGTTTCTTTTTCTTGAAAATTTTTTTTTTTGATTTTTTTCT CTTTCGATGACCTCCCATTGATATTTAAGTTAATAAACGGTCTTCAATTT CTCAAGTTTCAGTTTCATTTTTCTTGTTCTATTACAACTTTTTTTACTTC TTGCTCATTAGAAAGAAAGCATAGCAATCTAATCTAAGTTTTAATTACAA AACTAGTATGGAACGTCCGGGCGAAACCTTTACCGTCAGCTCCCCGGAAG AAGTGCGTCTGCCGTCTGTTCACCGCGATAACTCAACGATGGAAAACCAT AATAAACAGGAAACGGTGTTTTCTCTGGTTCAAGTCAAGGGTACCTGGAA GCGTAAGGCGGGCCAGAACGCCAAACAGGGTATGAAGGGCCGCGTTAGTC CGGCCAAAATTTATGAAAGCTCTAGTTCCTCAGGTACCACGTGGACGGTG GTTACCCCGATCACCTTTACGTACACCGTGACGCAGACCAAAAACCTGCT GGACCCGTCGAACGACACGCTGCTGCTGGGCCATATTATCGATACCCAGC AACTGGAAGCTGTCCGCAGCAATACGAAACCGCTGAAGCGTTTCATTGTG ATGGACGAAGTCGTGTATAATATCTACGGTTCCCAAGTCACCGAATATCT GGAAGCGCGCAACGTGCTGTACCGTATTCTGCCGCTGCCGACCACGGAAG AAAATAAATCAATGGATATGGCTCTGAAGATTCTGGAAGAAGTGCACCAG TTTGGTATCGACCGTCGCACCGAACCGATTATCGCGATTGGCGGTGGCGT TTGCCTGGATATCGTCGGTCTGGCAGCCTCTCTGTATCGTCGCCGTACCC CGTACATTCGTGTGCCGACCACGCTGCTGTCTTATATCGACGCAAGTGTG GGTGCTAAAACGGGCGTTAACTTTGCTAATTGTAAAAACAAGCTGGGTAC CTACATTGCGCCGGTTGCAGCTTTTCTGGATCGTTCGTTCATTCAGAGCA TCCCGCGCCGTCACATCGCAAACGGTCTGGCCGAAATGCTGAAAATGGCC CTGATGAAGCATCGCGGTCTGTTCGAACTGCTGGAAGTTCACGGCCAGTT TCTGCTGGATAGTAAATTCCAATCGGCAAGCGTCCTGGAAAACGATCGCA TTGACCCGGCCTCTGTCAGTACGCGTGTGGCAATCGAAACCATGCTGGAA GAACTGGCCCCGAATCTGTGGGAAGATGACCTGGATCGTCTGGTGGACTT TGGTCATCTGATTTCGCCGCAGCTGGAAATGAAAGTTCTGCCGGCACTGC TGCACGGCGAAGCTGTCAACATTGATATGGCGTATATGGTGTACGTTTCA TGCGAAATCGGTCTGCTGACCGAAGAAGAAAAATTCCGCATTATCTGCTG TATGATGGGCCTGGAACTGCCGGTGTGGCATCAGGATTTTACCTTCGCAC TGGTTCAAAAGTCCCTGTGTGACCGCCTGCAGCACTCAGGTGGCCTGGTT CGTATGCCGCTGCCGACGGGTCTGGGTCGTGCAGAAATTTTTAATGATAC CGACGAAGGTAGCCTGTTCCGCGCGTATGAAAAATGGTGCGATGAACTGT CCACCGGCTCACCGCAGTGACTCGAGTCATGTAATTAGTTATGTCACGCT TACATTCACGCCCTCCCCCCACATCCGCTCTAACCGAAAAGGAAGGAGTT AGACAACCTGAAGTCTAGGTCCCTATTTATTTTTTTATAGTTATGTTAGT ATTAAGAACGTTATTTATATTTCAAATTTTTCTTTTTTTTCTGTACAGAC GCGTGTACGCATGTAACATTATACTGAAAACCTTGCTTGAGAAGGTTTTG GGACGCTCGAAGGCTTTAATTTGCGGCCAATATTATTGAAGCATTTATCA GGGTTATTGTCTCATGAGCGGATACATATTTGAATGTATTTAGAAAAATA AACAAATAGGGGTTCCGCGCACATTTCCCCGAAAAGTGCCACCTGACGTC TAAGAAACCATTATTATCATGACATTAACCTATAAAAATAGGCGTATCAC GAGGCCCTTTCGTCTCGCGCGTTTCGGTGATGACGGTGAAAACCTCTGAC ACATGCAGCTCCCGGAGACGGTCACAGCTTGTCTG Amplicon1:A-HIS3-B SEQIDNO.83 ACTATATGTGAAGGCATGGCTATGGCACGGCAGACATTCCGCCAGATCAT CAATAGGCACCTTCATTCAACGTTTCCCATTGTTTTTTTCTACTATTGCT TTGCTGTGGGAAAAACTTATCGAAAGATGACGACTTTTTCTTAATTCTCG TTTTAAGAGCTTGGTGAGCGCTAGGAGTCACTGCCAGGTATCGTTTGAAC ACGGCATTAGTCAGGGAAGTCATAACACAGTCCTTTCCCGCAATTTTCTT TTTCTATTACTCTTGGCCTCCTCTAGTACACTCTATATTTTTTTATGCCT CGGTAATGATTTTCATTTTTTTTTTTCCACCTAGCGGATGACTCTTTTTT TTTCTTAGCGATTGGCATTATCACATAATGAATTATACATTATATAAAGT AATGTGATTTCTTCGAAGAATATACTAAAAAATGAGCAGGCAAGATAAAC GAAGGCAAAGATGACAGAGCAGAAAGCCCTAGTAAAGCGTATTACAAATG AAACCAAGATTCAGATTGCGATCTCTTTAAAGGGTGGTCCCCTAGCGATA GAGCACTCGATCTTCCCAGAAAAAGAGGCAGAAGCAGTAGCAGAACAGGC CACACAATCGCAAGTGATTAACGTCCACACAGGTATAGGGTTTCTGGACC ATATGATACATGCTCTGGCCAAGCATTCCGGCTGGTCGCTAATCGTTGAG TGCATTGGTGACTTACACATAGACGACCATCACACCACTGAAGACTGCGG GATTGCTCTCGGTCAAGCTTTTAAAGAGGCCCTAGGGGCCGTGCGTGGAG TAAAAAGGTTTGGATCAGGATTTGCGCCTTTGGATGAGGCACTTTCCAGA GCGGTGGTAGATCTTTCGAACAGGCCGTACGCAGTTGTCGAACTTGGTTT GCAAAGGGAGAAAGTAGGAGATCTCTCTTGCGAGATGATCCCGCATTTTC TTGAAAGCTTTGCAGAGGCTAGCAGAATTACCCTCCACGTTGATTGTCTG CGAGGCAAGAATGATCATCACCGTAGTGAGAGTGCGTTCAAGGCTCTTGC GGTTGCCATAAGAGAAGCCACCTCGCCCAATGGTACCAACGATGTTCCCT CCACCAAAGGTGTTCTTATGTAGTGACACCGATTATTTAAAGCTGCAGCA TACGATATATATACATGTGTATATATGTATACCTATGAATGTCAGTAAGT ATGTATACGAACAGTATGATACTGAAGATGACAAGGTAATGCATCACACC TTTCGAGAGGACGATGCCCGTGTCTAAATGATTCGACCAGCCTAAGAATG TTCAAC Amplicon2:B-P.sub.PGK1-MT SEQIDNO.84 ACCTTTCGAGAGGACGATGCCCGTGTCTAAATGATTCGACCAGCCTAAGA ATGTTCAACCCTGACTTCAACTCAAGACGCACAGATATTATAACATCTGC ATAATAGGCATTTGCAAGAATTACTCGTGAGTAAGGAAAGAGTGAGGAAC TATCGCATACCTGCATTTAAAGATGCCGATTTGGGCGCGAATCCTTTATT TTGGCTTCACCCTCATACTATTATCAGGGCCAGAAAAAGGAAGTGTTTCC CTCCTTCTTGAATTGATGTTACCCTCATAAAGCACGTGGCCTCTTATCGA GAAAGAAATTACCGTCGCTCGTGATTTGTTTGCAAAAAGAACAAAACTGA AAAAACCCAGACACGCTCGACTTCCTGTCTTCCTATTGATTGCAGCTTCC AATTTCGTCACACAACAAGGTCCTAGCGACGGCTCACAGGTTTTGTAACA AGCAATCGAAGGTTCTGGAATGGCGGGAAAGGGTTTAGTACCACATGCTA TGATGCCCACTGTGATCTCCAGAGCAAAGTTCGTTCGATCGTACTGTTAC TCTCTCTCTTTCAAACAGAATTGTCCGAATCGTGTGACAACAACAGCCTG TTCTCACACACTCTTTTCTTCTAACCAAGGGGGTGGTTTAGTTTAGTAGA ACCTCGTGAAACTTACATTTACATATATATAAACTTGCATAAATTGGTCA ATGCAAGAAATACATATTTGGTCTTTTCTAATTCGTAGTTTTTCAAGTTC TTAGATGCTTTCTTTTTCTCTTTTTTACAGATCATCAAGGAAGTAATTAT CTACTTTTTACAACAAATATAATGCAAACGGCAAAAGTCTCGGACACCCC GGTTGAATTTATTGTGGAACATCTGCTG Amplicon7:E-P.sub.TEF1-EEVS-T.sub.CYC1-A SEQIDNO.85 AGATTACTCTAACGCCTCAGCCATCATCGGTAATAGCTCGAATTGCTGAG AACCCGTGACACCGCGAATCCTTACATCACACCCAATCCCCCACAAGTGA TCCCCCACACACCATAGCTTCAAAATGTTTCTACTCCTTTTTTACTCTTC CAGATTTTCTCGGACTCCGCGCATCGCCGTACCACTTCAAAACACCCAAG CACAGCATACTAAATTTCCCCTCTTTCTTCCTCTAGGGTGTCGTTAATTA CCCGTACTAAAGGTTTGGAAAAGAAAAAAGAGACCGCCTCGTTTCTTTTT CTTCGTCGAAAAAGGCAATAAAAATTTTTATCACGTTTCTTTTTCTTGAA AATTTTTTTTTTTGATTTTTTTCTCTTTCGATGACCTCCCATTGATATTT AAGTTAATAAACGGTCTTCAATTTCTCAAGTTTCAGTTTCATTTTTCTTG TTCTATTACAACTTTTTTTACTTCTTGCTCATTAGAAAGAAAGCATAGCA ATCTAATCTAAGTTTTAATTACAAAACTAGTATGGAACGTCCGGGCGAAA CCTTTACCGTCAGCTCCCCGGAAGAAGTGCGTCTGCCGTCTGTTCACCGC GATAACTCAACGATGGAAAACCATAATAAACAGGAAACGGTGTTTTCTCT GGTTCAAGTCAAGGGTACCTGGAAGCGTAAGGCGGGCCAGAACGCCAAAC AGGGTATGAAGGGCCGCGTTAGTCCGGCCAAAATTTATGAAAGCTCTAGT TCCTCAGGTACCACGTGGACGGTGGTTACCCCGATCACCTTTACGTACAC CGTGACGCAGACCAAAAACCTGCTGGACCCGTCGAACGACACGCTGCTGC TGGGCCATATTATCGATACCCAGCAACTGGAAGCTGTCCGCAGCAATACG AAACCGCTGAAGCGTTTCATTGTGATGGACGAAGTCGTGTATAATATCTA CGGTTCCCAAGTCACCGAATATCTGGAAGCGCGCAACGTGCTGTACCGTA TTCTGCCGCTGCCGACCACGGAAGAAAATAAATCAATGGATATGGCTCTG AAGATTCTGGAAGAAGTGCACCAGTTTGGTATCGACCGTCGCACCGAACC GATTATCGCGATTGGCGGTGGCGTTTGCCTGGATATCGTCGGTCTGGCAG CCTCTCTGTATCGTCGCCGTACCCCGTACATTCGTGTGCCGACCACGCTG CTGTCTTATATCGACGCAAGTGTGGGTGCTAAAACGGGCGTTAACTTTGC TAATTGTAAAAACAAGCTGGGTACCTACATTGCGCCGGTTGCAGCTTTTC TGGATCGTTCGTTCATTCAGAGCATCCCGCGCCGTCACATCGCAAACGGT CTGGCCGAAATGCTGAAAATGGCCCTGATGAAGCATCGCGGTCTGTTCGA ACTGCTGGAAGTTCACGGCCAGTTTCTGCTGGATAGTAAATTCCAATCGG CAAGCGTCCTGGAAAACGATCGCATTGACCCGGCCTCTGTCAGTACGCGT GTGGCAATCGAAACCATGCTGGAAGAACTGGCCCCGAATCTGTGGGAAGA TGACCTGGATCGTCTGGTGGACTTTGGTCATCTGATTTCGCCGCAGCTGG AAATGAAAGTTCTGCCGGCACTGCTGCACGGCGAAGCTGTCAACATTGAT ATGGCGTATATGGTGTACGTTTCATGCGAAATCGGTCTGCTGACCGAAGA AGAAAAATTCCGCATTATCTGCTGTATGATGGGCCTGGAACTGCCGGTGT GGCATCAGGATTTTACCTTCGCACTGGTTCAAAAGTCCCTGTGTGACCGC CTGCAGCACTCAGGTGGCCTGGTTCGTATGCCGCTGCCGACGGGTCTGGG TCGTGCAGAAATTTTTAATGATACCGACGAAGGTAGCCTGTTCCGCGCGT ATGAAAAATGGTGCGATGAACTGTCCACCGGCTCACCGCAGTGACTCGAG TCATGTAATTAGTTATGTCACGCTTACATTCACGCCCTCCCCCCACATCC GCTCTAACCGAAAAGGAAGGAGTTAGACAACCTGAAGTCTAGGTCCCTAT TTATTTTTTTATAGTTATGTTAGTATTAAGAACGTTATTTATATTTCAAA TTTTTCTTTTTTTTCTGTACAGACGCGTGTACGCATGTAACATTATACTG AAAACCTTGCTTGAGAAGGTTTTGGGACGCTCGAAGGCTTTAATTTGCGG CCAATATTATTGAAGCATTTATCAGGGTTATTGTCTCATGAGCGGATACA TATTTGAATGTATTTAGAAAAATAAACAAATAGGGGTTCCGCGCACATTT CCCCGAAAAGTGCCACCTGACGTCTAAGAAACCATTATTATCATGACATT AACCTATAAAAATAGGCGTATCACGAGGCCCTTTCGTCTCGCGCGTTTCG GTGATGACGGTGAAAACCTCTGACACATGCAGCTCCCGGAGACGGTCACA GCTTGTCTGACTATATGTGAAGGCATGGCTATGGCACGGCAGACATTCCG CCAGATCATCAATAGGCAC
[0302] Although certain embodiments have been illustrated and described herein, it will be appreciated by those of ordinary skill in the art that a wide variety of alternate and/or equivalent embodiments or implementations calculated to achieve the same purposes may be substituted for the embodiments shown and described without departing from the scope. Those with skill in the art will readily appreciate that embodiments may be implemented in a very wide variety of ways. This application is intended to cover any adaptations or variations of the embodiments discussed herein. Therefore, it is manifestly intended that embodiments be limited only by the claims and the equivalents thereof.