CHEMILUMINESCENT BIOSENSOR FOR DETECTING COAGULATION FACTORS
20200182889 ยท 2020-06-11
Inventors
Cpc classification
C09K11/07
CHEMISTRY; METALLURGY
G01N2333/96463
PHYSICS
G01N33/86
PHYSICS
International classification
G01N33/86
PHYSICS
C09K11/07
CHEMISTRY; METALLURGY
Abstract
A chemiluminescent biosensor for detecting a coagulation factor in a blood sample including: a fluorogenic substrate for the coagulation factor, where the fluorogenic substrate includes a fluorescent dye; and a quencher conjugated with the fluorogenic substrate. The biosensor rapidly and accurately detects a coagulation factor in a blood sample including whole blood or plasma, thereby useful for minimizing or eliminating any reversal effect of anticoagulants.
Claims
1. A biosensor for detecting a coagulation factor in a blood sample comprising: a fluorogenic substrate for the coagulation factor, wherein the fluorogenic substrate includes a fluorescent dye; and a quencher conjugated with the fluorogenic substrate.
2. The biosensor of claim 1, wherein the coagulation factor is coagulation factor IIa or Xa.
3. The biosensor of claim 1, wherein the blood sample is plasma or whole blood.
4. The biosensor of claim 1, wherein the blood sample is 1 to 1,000-fold diluted plasma or whole blood.
5. The biosensor of claim 1, wherein the fluorescent dye is at least one selected from the group consisting of 2-aminobenzoyl (Abz), N-methyl-anthraniloyl (N-Me-Abz). 5-(dimethylamino)naphthalene-1-sulfonyl (Dansyl), 5-[(2-aminoethyl)amino]-naphthalene-1-sulfonic acid (EDANS), 7-dimethylaminocoumarin-4-acetate (DMACA), 7-amino-4-methylcoumarin (AMC), (7-methoxycoumarin-4-yl)acetyl (MCA), rhodamine, rhodamine 101, rhodamine 110 and resorufin.
6. The biosensor of claim 1, wherein the fluorescent dye emits light when: the fluorescent dye dissociates from the fluorogenic substrate by a hydrolysis reaction between the coagulation factor and the fluorogenic substrate; and the fluorescent dye interacts with high-energy intermediate formed from 1, 1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent.
7. The biosensor of claim 1, wherein the 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent comprises an ODI and H.sub.2O.sub.2.
8. The biosensor of claim 1, wherein the quencher is at least one selected from the group consisting of 2,4-Dinitrophenyl (DNP), N-(2,4-Dinitrophenyl)ethylenediamine (EDDnp), 4-Nitro-phenylalanine, 3-Nitro-tyrosine, para-Nitroaniline (pNa), 4-(4-Dimethylaminophenylazo)benzoyl (DABCYL) and 7-Nitro-benzo[2,1,3]oxadiazol-4-yl (NBD).
9. A method of monitoring a coagulation factor in a blood sample, the method comprising: mixing and reacting the biosensor of claim 1 with a blood sample including a coagulation factor in a buffer; adding a 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent to the reacted mixture; and measuring CL intensity.
10. The method of claim 9, wherein the reaction time between the blood sample and the fluorogenic substrate in the biosensor at room temperature (212 C.) or 37 C. is 10 seconds to 120 minutes.
11. The method of claim 9, wherein measuring CL intensity is performed for 1 to 10 seconds after adding the ODI-CL reagent.
12. The method of claim 9, wherein the coagulation factor is coagulation factor IIa or Xa.
13. The method of claim 9, wherein the blood sample is plasma or whole blood
14. The method of claim 9, wherein the buffer is selected from the groups consisting of PBST, PBS, TBST and TBS.
15. A method of quantifying a coagulation factor in a blood sample, the method comprising: mixing and reacting the biosensor of claim 1 with a blood sample including a coagulation factor in a buffer; adding 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent to the reacted mixture; measuring CL intensity; and comparing the intensity of CL with a standard intensity.
16. A kit for quantifying a coagulation factor in a blood sample, the kit comprising: the biosensor of claim 1; and a container.
17. The kit of claim 16 further comprising: a buffer; and 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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DETAILED DESCRIPTION
[0049] According to an embodiment of the present invention, a biosensor is provided for detecting a coagulation factor in a blood sample, the biosensor comprises: a fluorogenic substrate for the coagulation factor, wherein the fluorogenic substrate includes a fluorescent dye; and a quencher conjugated with the fluorogenic substrate. The fluorescent dye emits light when the fluorescent dye is dissociated from the fluorogenic substrate by a hydrolysis reaction between the coagulation factor and the fluorogenic substrate, and when the fluorescent dye interacts with high-energy intermediate formed from 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent. The 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent may comprise an ODI and H.sub.2O.sub.2.
[0050] The fluorescent dye used in the fluorogenic substrate may be at least one of 2-aminobenzoyl (Abz), N-methyl-anthraniloyl (N-Me-Abz), 5-(dimethylamino)naphthalene-1-sulfonyl (Dansyl), 5-[(2-aminoethyeamino]-naphthalene-1-sulfonic acid (EDANS), 7-dimethylaminocoumarin-4-acetate (DMACA), 7-amino-4-methylcoumarin (AMC), (7-methoxycoumarin-4-yl)acetyl (MCA), rhodamine, rhodamine 101, rhodamine 110 and resorufin. In this specification, AMC is used as an example, but other fluorescent dye can be used alone or in combination with each other.
[0051] The quencher used in the biosensor may be at least one of 2,4-Dinitrophenyl (DNP), N-(2,4-Dinitrophenyl)ethylenediamine (EDDnp), 4-Nitro-phenylalanine, 3-Nitro-tyrosine, para-Nitroaniline (pNa), 4-(4-Dimethylaminophenylazo)benzoyl (DABCYL) and 7-Nitro-benzo[2,1,3]oxadiazol-4-yl (NBD).
[0052] The coagulation factor of the present invention can be any type of coagulation factor that is involved in the blood coagulation cascade. Among the various coagulation factors, factor IIa (thrombin) and factor Xa are preferable.
[0053] As shown in
[0054] An exemplary structure of a IIa specific fluorogenic substrate and an Xa specific fluorogenic substrate are shown TABLE 1 below.
TABLE-US-00001 TABLE 1 Fluorogenic substrate IIa Xa Formula Benzoyl-Phe-Val-Arg- CH.sub.3SO.sub.2-D-CHA-Gly-Arg- AMC, HCl AMC, AcOH Physical Form Lyophilized Lyophilized Fluorescent dye Chemical Structure
[0055] In the present invention, the blood sample can be either plasma or whole blood. The blood sample can be used as is, or 1 to 1,000-fold diluted. The effect of using plasma in ODI-CL reactions using AMC (12.5 M) as a fluorescent dye is shown in
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[0057] In the present invention, peptides specific to the coagulation factor included in the biosensor may react with a coagulation factor in a buffer. The buffer can be any one of Phosphate buffered saline with Tween-20 (PBST), Phosphate buffered saline (PBS), Tris buffered saline with Tween-20 (TBST) and Tris buffered saline (TBS). As shown in
[0058] In the present invention, the reaction (hydrolysis) time between the blood sample and the fluorogenic substrate in the biosensor at room temperature (212 C.) or 37 C. may be controlled in the range of approximately 10 seconds to 120 minutes. Preferably, the reaction (hydrolysis) time may be controlled to be 1-30 minutes, and most preferably, 1-4 minutes.
[0059] The reaction (hydrolysis) time is also applicable to the biosensor capable of sensing the coagulation factor Xa in 10% human plasma in PBS. The following table shows a normalized intensity of ODI-CL and fluorescence (conventional) for quantifying factor Xa in 10% human plasma.
TABLE-US-00002 TABLE 2 Normalized Normalized X.sub.a ODI-CL Intensity Fluorescence Intensity (nM) (2-min incubation) (30-min incubation) 0 2.51 4.22 0.02 3.46 4.92 0.05 3.94 4.08 0.11 4.42 4.22 0.27 5.26 5.63 0.62 6.57 6.61 1.45 8.48 9.14 3.37 11.11 13.50 7.87 17.68 20.68 18.37 27.12 39.24 42.86 48.51 63.01 100.00 100.00 100.00 *The error range of each value measured with ODI-CL or fluorescence detection was 3~7%. **The excitation and emission wavelengths for the fluorescence measurement were 342 and 440 nm.
[0060] As shown in TABLE 2, the biosensor with ODI-CL detection is much more sensitive than a conventional sensor with fluorescence detection. ODI-CL was able to detect 0.02 nM X.sub.a with only a 2-min incubation period under ambient conditions, whereas the fluorescence detection could not sufficiently sense 0.11 nM X.sub.a even with the 30-min incubation due to the high background generated while operating light source. The sensitivity of the biosensor with the fluorescence detection, a conventional method, was used to compare with the biosensor with ODI-CL detection. (https://www.mybiosource.com/prods/Assay-Kit/Factor-Xa/datasheet.php?products_id.84634).
[0061] According to another embodiment of the present invention, a method for monitoring/quantifying a coagulation factor in a blood sample by using a biosensor as described above. The method includes mixing and reacting the biosensor with a blood sample including a coagulation factor in a buffer; adding a 1,1-oxalyldiimidazole chemiluminescence (ODI-CL) reagent to the reacted mixture; and measuring CL intensity. The reaction (hydrolysis) time between the blood sample and the fluorogenic substrate in the biosensor at room temperature (212 C.) or 37 C. may be 10 seconds to 120 minutes, and the measuring CL intensity may be performed for 1 to 10 seconds after adding the ODI-CL reagent.
[0062] With a 2-min incubation of the coagulation factor IIa (and Xa) and a substrate conjugated with AMC, as shown in
[0063] The following TABLE 3 shows that a biosensor with ODI-CL detection according to exemplary embodiments of the present invention can quantify coagulation factors IIa and Xa with good accuracy, precision, and recovery. Thus, a biosensor according to the present invention can quantify factors IIa and Xa in human plasma with a statistically acceptable reproducibility far more rapidly than conventional biosensors.
TABLE-US-00003 TABLE 3 (Accuracy, precision, and recovery for the all-in-one Biosensor with ODI-CL detection for the quantization of IIa and Xa in human plasma (N = 5)) Sample 1 Sample 2 Expected Measured Recovery Factor (nM) (nM) (nM) (nM) (%) IIa 6.8 27.6 17.2 16.52 0.94 95.9 8.5 14.0 11.25 11.94 0.68 105.8 Xa 5.0 20.0 12.5 12.79 0.43 101.6 2.5 17.5 10.0 9.42 0.52 94.2
[0064] Analyses of Factors IIa and Xa in Whole Blood
[0065] A biosensor according to exemplary embodiments of the present invention can be used with whole blood as the sample.
[0066] As shown in
[0067] As shown in
[0068] The linear calibration curves of
TABLE-US-00004 TABLE 4 Sample Analytical Dynamic Method Factor type time (min) range (nM) LOD (pM) References Self-powered IIa Plasma 30 1-100 410 (Jung et al. triboelectric aptasensor 2016)* Bio-dots/AuNPs IIa Serum 60 0-35 1,050 (Kuang et al. nanosensor with FRET 2016)** detection Aptasensor with IIa Serum/ 150 0-0.05 0.01 (Hao and Zhao fluorogenic substrate plasma 2016)*** Cyclic peptide coated IIa plasma 180 0.005-0.2 5 (Zhao and Gao magnetic bead with 2015)**** fluorogenic substrate Colorimetric assay IIa Plasma 90 0.001-0.1 0.2 (Chen et al. with chromogenic 2010)***** substrate Fluorometric Assay kit Xa Plasma 30-60 0-4.4 444 (MyBiosource) ****** Biosensor with ODI- IIa Plasma 2 0.3-27.2 104 This research CL detection Biosensor with ODI- IIa Whole 4 0.21-10 66 This research CL detection blood Biosensor with ODI- Xa Plasma 2 0.25-20 44 This research CL detection Biosensor with ODI- Xa Whole 4 0.06-5 18 This research CL detection blood *Jung, Y.K., Kim, K.N., Baik, J.M., Kim, B.-S., 2016 Self-powered triboelectric aptasensor for label-free highly specific thrombin detection. Nano Energy 30, 77-83. **Kuang, L., Cao, S.P., Zhang, L., Li, Q.H., Liu, Z.C., Liang, R.P., Qiu, J.D., 2016. A novel nanosensor composed of aptamer bio-dots and gold nanoparticles for determination of thrombin with multiple signals. Biosens Bioelectron 85, 798-806. ***Hao, L.H., Zhao, Q., 2016. Microplate based assay for thrombin detection using an RNA aptamer as affinity ligand and cleavage of a chromogenic or a fluorogenic peptide substrate. Microchim Acta 183(6), 1891-1898. **** Zhao, Q., Gao, J., 2015. Sensitive and selective detection of thrombin by using a cyclic peptide as affinity ligand. Biosens Bioelectron 63, 21-25. ***** Chen, C.K., Huang, C.C., Chang, H.T., 2010. Label-free colorimetric detection of picomolar thrombin in blood plasma using a gold nanoparticle-based assay. Biosens Bioelectron 25(8), 1922-1927. ******(https://www.mybiosource.com/prods/Assay-Kit/Factor-Xaidatasheet.php? products_id=841634)
[0069] TABLE 4 shows that the sensitivity of a biosensor with ODI-CL detection, capable of quantifying IIa and Xa in plasma and whole blood, is as low as other methods operated with 10100 fold diluted human samples such as serum and plasma.
[0070] The fluorogenic substrate for the coagulation factors IIa and Xa having a fluorescent dye (AMC) have good specificity and selectivity.
[0071] Also,
[0072] TABLE 5 shows that the accuracy, precision, and recovery of the biosensor for whole blood are as good as those for human plasma.
TABLE-US-00005 TABLE 5 (Accuracy, precision, and recovery for the all-in-one Biosensor with ODI-CL detection for the quantization of IIa and Xa in whole blood (N = 5)) Sample 1 Sample 2 Expected Measured Recovery Factor (nM) (nM) (nM) (nM) (%) II.sub.a 0.5 1.5 1.0 0.95 0.05 95.9 1.5 3.5 2.5 2.66 0.18 106.8 X.sub.a 0.8 2.0 1.4 1.35 0.09 96.4 1.4 4.2 2.8 2.63 0.20 93.9
[0073] Accordingly, a biosensor with ODI-CL detection according to exemplary embodiments of the present invention rapidly quantify the coagulation factors IIa and Xa in whole blood with acceptable reproducibility as compared to conventional biosensors.
[0074] Additionally, TABLE 6 shows that the concentrations of IIa and Xa in whole blood quantified using the biosensor with ODI-CL detection are the same as those determined using the conventional method with fluorescence detection within the statistically acceptable error range.
TABLE-US-00006 TABLE 6 (Quantification of IIa and Xa in whole blood using the biosensor with ODI-CL detection and conventional method with fluorescence detection (N = 3)) Biosensor with Conventional method with ODI-CL detection fluorescence detection (4-min incubation) (30-min incubation) IIa Xa IIa Xa Sample 1 0.98 (0.05) 0.63 (0.04) 0.95 (0.06) 0.67 (0.05) Sample 2 1.60 (0.09) 1.29 (0.06) 1.54 (0.11) 1.20 (0.09) Sample 3 2.85 (0.12) 2.22 (0.11) 2.99 (0.16) 2.03 (0.14)
[0075] A biosensor and a method of using a biosensor as described above may be provided in the form of a kit. In one embodiment of the present invention, the kit includes the above-described biosensor and a container. The kit may further include a buffer and an ODI-CL reagent (e.g., ODI and H.sub.2O.sub.2).
[0076] Accordingly, the present invention provides a cost-effective biosensor with ODI-CL detection which can be applied as a new device for rapid coagulation testing. The fluorescent dye (Luminophore) can be formed from the rapid reaction between coagulation factors (e.g., Xa) and a specific fluorogenic substrate. The intensity of light emitted with the addition of ODI-CL reagents (e.g., ODI, H.sub.2O.sub.2) in the solution was proportionally enhanced with the increase of the coagulation factor concentration in blood sample (e.g., plasma, whole blood). It is expected that the wide dynamic range of the biosensor with ODI-CL detection can diagnose and monitor bleeding and clotting in patients with statistically acceptable accuracy, precision, and reproducibility. In addition, the analytical procedure of the biosensor with ODI-CL detection is rapid and simple because sample pretreatment, time-consuming multiple incubations and washings aren't necessary. In conclusion, the concepts and principle of the biosensor with ODI-CL detection of the present invention can be widely applied for the early diagnosis and rapid monitoring of human diseases such as cancer, cardiac ailments, and infectious diseases (e.g., HIV, SARs, Zika virus).
EXAMPLES
[0077] The experiments described in this specification were conducted with the following materials and procedures.
[0078] Chemicals and Materials
[0079] Thrombin from human plasma (coagulation factor IIa, 100 UN) and fluorogenic substrate of thrombin (Benzoyl-Phe-Val-Arg-AMC, HCl, 25 mg) were purchased from Sigma-Aldrich. Factor Xa (human) native protein was purchased from Invitrogen. Fluorogenic substrate of factor Xa (CH.sub.3SO.sub.2-D-CHA-Gly-Arg-AMC, AcOH) was purchased from Cryopep. AMC, as a fluorescent dye (fluorophore), is 7-Amino-4-methylcoumarin. Normal plasma lyophilized with pooled human dornors (1 g) was purchased from LEE Biosolution. Bis (2,4,6-trichlorophenyl) oxalate (TCPO) and 4-methylimidazole (4 MImH) were purchased from TCI America. 3 and 30% H.sub.2O.sub.2 were purchased from VWR. Deionized H.sub.2O (HPLC grade), Ethyl acetate, Isopropyl alcohol, and high concentration of PBS (pH 7.4, 20), TBS (pH 7.410), PBST and TBST were purchased from EMD. 8-well EIA/RIA strip-well plate was purchased from Costar. Human plasma and whole blood were provided by Meritus Medical Center, IIagerstown, Md., USA.
[0080] Confirmation of the Chemical Reaction Between Coagulation Factor IIa or Xa and a Specific Fluorogenic Substrate Using ODI-CL Detection
[0081] Experiment 1: Background of Fluorogenic Substrate Only in the Absence of Factor IIa or Xa in ODI-CL Reaction (
[0082] Each fluorogenic substrate (5 mg/ml) was dissolved in DMSO as a stock solution. The stock solution was stored in a freezer (80 C.). The working solution of fluorogenic substrate (5 g/ml) diluted in PBS (pH 7,4) was prepared before conducting the experiment. Each working solution (10 l) was injected into a borosilicate test tube (12 mm75 mm). The tube was inserted into the detection area of the luminometer (Lumat LB 9507, Berthold, Inc) with two syringe pumps. 100 mM H.sub.2O.sub.2 (25 l) dissolved in isopropyl alcohol was dispensed through the first syringe pump of the luminometer. With the addition of ODI (25 l) using the second syringe pump, we investigated whether each fluorogenic substrate can emit light in the absence of factor IIa or Xa. With this procedure, we were able to determine the background of fluorogenic substrate in the absence of factor IIa and Xa in ODI-CL reaction.
[0083] Experiment 2: CL Emission of AMC Formed from the Reaction of Fluorogenic Substrate and Coagulation Factor (
[0084] Each coagulation factor (IIa or Xa, 5 nM) was prepared in 10-fold diluted plasma with deionized H.sub.2O. Each fluorogenic substrate (5 g/ml) was prepared in PBS. The mixture of factor IIa (50 l) and fluorogenic substrate (50 l) of factor IIa in a strip-well was incubated for 2 minutes under ambient condition. Also, the mixture of factor Xa (50 l) and flurogenic substrate (50 l) of factor Xa in a strip-well was also incubated for 2 minutes under ambient condition. After the incubation, each mixture (10 l) was inserted into a borosilicate test tube. H.sub.2O.sub.2 (25 l) and ODI (25 l) were consecutively dispensed through two syringe pumps of the luminometer to measure relative CL intensity of light emitted in the tube.
[0085] Experiment 3: Sensitivity of Fluorescence and ODI-CL for the Quantification of Coagulation Factor (TABLE 2)
[0086] 12 standards (0-10 nM) of factor Xa in 10% human plasma were prepared. Fluorogenic substrate (5 g/ml) of factor Xa was prepared in PBS. Each standard solution (50 l) was mixed with fluorogenic substrate (50 l) in a strip-well. The mixture was incubated for 2 minutes under ambient condition. After the incubation, relative CL intensity of each sample was measured using the luminometer operated with the same method described in Experiments 1 and 2. In order to measure fluorescence intensity of each sample, the mixture in the strip-well was incubated for 30 min under ambient condition. After the incubation, the strength of fluorescence emitted in the strip-well was measured with a microplate reader (Infinite M 1000 of Tecan, Inc.). Finally, the sensitivity of ODI-CL detection for the quantification of coagulation factor was compared with that of fluorescence detection.
[0087] Experiment 4: Quantification of Coagulation Factors in Human Plasma Using the Biosensor with ODI-CL Detection (TABLE 3)
[0088] Standards of factor IIa and Xa were prepared with 10% plasma diluted with deionized H.sub.2O. Unknown samples were prepared with 100% plasma. Then, each sample was 10-fold diluted in deionized H.sub.2O. Each standard or sample (50 l) was dispensed into a strip-well containing fluorogenic substrate. The mixture in the strip-well was incubated for 2 minutes under ambient condition. The fluorogenic substrate of factor IIa (5 g/ml) was prepared in TBST. Also, the fluorogenic substrate of factor Xa (5 g/ml) was prepared in PBS. After the incubation, light emitted from each mixture with the addition of ODI CL reagents was measured for 2 sec using the luminometer.
[0089] Experiment 5: Quantification of Coagulation Factors in Human Whole Blood Using the Biosensor with ODI-CL Detection (TABLE 5)
[0090] Standards of factor IIa and Xa were prepared with 10% whole blood diluted with deionized H.sub.2O. Unknown whole blood samples were 10-fold diluted in deionized H.sub.2O. Each standard or sample (50 l) was dispensed into a strip-well containing fluorogenic substrate. The mixture in the strip-well was incubated for 4 minutes under ambient condition. The fluorogenic substrate of factor IIa (25 g/ml) was prepared in TBST. Also, the fluorogenic substrate of factor Xa (25 g/ml) was prepared in PBS. After the 4-min incubation, light emitted from each mixture with the addition of ODI-CL reagents was measured for 2 sec using the luminometer.
[0091] Experiment 6: Correlation Between Biosensor with ODI-CL Detection and Conventional Method with Fluorescence Detection for the Quantification of IIa and Xa in 10-Fold Diluted Plasma and Whole Blood (TABLE 4)
[0092] In order to confirm the correlation between the biosensor with ODI-CL detection and the conventional method with fluorescence detection, the concentrations of IIa and Xa in 10-fold diluted plasma or whole blood (e.g., standards, samples) were determined with a microplate reader with fluorescence detection (Infinite M 1000, Tecan, Inc). The concentrations of fluorogenic substrates of IIa and Xa for the quantification of IIa and Xa using the conventional method were the same as those using the biosensor with ODI-CL detection described in Experiments 4 and 5. Each standard or sample (50 l) was mixed with fluorogenic substrate (50 l) in a black well. The black well-plate (96 well, Greiner Bio-One) containing various mixtures, was inserted into the microplate reader with fluorescence detection and incubated for 30 min at room temperature. After the incubation, the relative intensity of fluorescence emitted from each well was measured at 440 nm emission wavelength (excitation wavelength: 342 nm). After determining the concentrations of samples in plasma and whole blood using the conventional method, they were compared with those that used the biosensor with ODI-CL detection to confirm the correlation between the new and conventional methods.
[0093] Analysis of Experimental Data
[0094] All experimental results observed in this specification were analyzed using the statistical tools of Microsoft Excel and SigmaPlot 12.5 (Systat software, Inc.).
[0095] It is to be understood that the above-described biosensor and method are merely illustrative embodiments of the principles of this disclosure, and that other compositions and methods for using them may be devised by one of ordinary skill in the art, without departing from the spirit and scope of the invention. It is also to be understood that the disclosure is directed to embodiments both comprising and consisting of the disclosed parts.