Degradable Imidazolium Oligomer and Polymer for Antimicrobial Applications
20200181122 · 2020-06-11
Inventors
Cpc classification
A01N47/06
HUMAN NECESSITIES
A61P31/00
HUMAN NECESSITIES
C08L79/04
CHEMISTRY; METALLURGY
C07D233/61
CHEMISTRY; METALLURGY
A01N47/34
HUMAN NECESSITIES
International classification
C07D403/12
CHEMISTRY; METALLURGY
Abstract
The present invention relates to an oligomer of formula (I)
##STR00001##
where the various groups are as defined in the specification. The present invention also relates to an oligomer or a polymer of formula (II)
##STR00002##
where the various groups are as defined in the specification. The present invention also relates to the methods for their preparation, antimicrobial composition, antimicrobial gel containing these oligomers and/or polymers of Formula (I) and (II), and uses of these oligomers and/or polymers in the treatment of a microbial infection or disease.
Claims
1. An oligomer of formula (I) ##STR00061## wherein linker 1 is an alkyl-aryl-alkyl group or (C.sub.2-C.sub.8)alkene; p and q are independently an integer from 2 to 6, that is, 2, 3, 4, 5, or 6; linker 2 is ##STR00062## m is 0 or 1; A is independently aryl or heteroaryl; B is independently O, N or S; C is independently aryl or heteroaryl; R.sub.1 is a bond, alkyl, or absent; R.sub.2 is a bond, alkoxy or amine; R.sub.3 is carbonyl, bond or alkyl; R.sub.4 is bond or alkyl; R.sub.5 is alkyl; and X is a halide selected from fluoride, chloride and bromide.
2. (canceled)
3. The oligomer of claim 1, wherein linker 2 is selected from the group consisting of ##STR00063##
4. The oligomer of claim 1, wherein when linker 1 is alkyl-aryl-alkyl, said alkyl-aryl-alkyl is a C.sub.1-6alkyl-phenyl-C.sub.1-6alkyl.
5. (canceled)
6. The oligomer of claim 1, wherein the oligomer has a terminal group, or the oligomer is selected from ##STR00064##
7-9. (canceled)
10. An oligomer or a polymer of formula (II) ##STR00065## wherein linker 1 is an alkyl-aryl-alkyl group or (C.sub.2-C.sub.8)alkene; n is an integer from 3 to 30, that is, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30; linker 2 is ##STR00066## m is 0 or 1; A is independently aryl or heteroaryl; B is independently O, N or S; C is independently aryl or heteroaryl; R.sub.1 is a bond or alkyl; R.sub.2 is a bond, alkoxy or amine; R.sub.3 is carbonyl, bond or alkyl; R.sub.4 is bond or alkyl; R.sub.5 is alkyl; and X is a halide selected from fluoride, chloride and bromide.
11. (canceled)
12. The oligomer or the polymer of claim 10, wherein linker 2 is selected from the group consisting of ##STR00067##
13. The oligomer or the polymer of claim 10, wherein when linker 1 is alkyl-aryl-alkyl, said alkyl-aryl-alkyl is a C.sub.1-6alkyl-phenyl-C.sub.1-6alkyl.
14. (canceled).
15. The oligomer or the polymer of claim 10, wherein the polymer has a terminal group selected from the group consisting of linker 2, an imidazolium ring and a combination thereof.
16. An antimicrobial composition comprising the oligomer as defined in claim 1.
17. (canceled)
18. The antimicrobial composition of claim 17, wherein said antimicrobial composition inhibits the activity or treats the infection or disease caused by a microbe that is selected from the group consisting of Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilius, Klebsiella pneumonia, Cryptococcus neoformans and Candida albicans, or wherein when said microbe is contacted with said antimicrobial composition at a defined concentration, the microbial activity of said microbe is reduced to 1%, or to 0.5%, or to 0.1%, or wherein said defined concentration of said antimicrobial composition is in the range of about 1 g/ml to about 100 g/ml, or wherein the reduction of the microbial activity is achieved within a duration of about 0.5 minutes to about 120 minutes, or wherein the microbe is not resistant to said antimicrobial composition.
19-24. (canceled)
25. A method of treating a microbial infection or disease comprising administering the oligomer of claim 1 to a subject.
26. The method of claim 25, wherein said oligomer inhibits the activity or treats the infection or disease caused by a microbe that is selected from the group consisting of Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilius, Klebsiella pneumonia, Cryptococcus neoformans and Candida albicans.
27. The method of claim 26, wherein when said microbe is contacted with said antimicrobial composition at a defined concentration, the microbial activity is reduced to 1% or wherein said defined concentration of said antimicrobial composition is in the range of about 1 g/ml to about 100 g/ml.
28-32. (canceled)
33. A method of preparing an oligomer of formula (I) ##STR00068## wherein linker 1 is an alkyl-aryl-alkyl group or (C.sub.2-C.sub.8)alkene; p and q are independently an integer from 2 to 6, that is 2, 3, 4, 5 or 6; linker 2 is ##STR00069## m is 0 or 1; A is independently aryl or heteroaryl; B is independently O, N or S; C is independently aryl or heteroaryl; R.sub.1 is a bond or alkyl; R.sub.2 is a bond, alkoxy or amine; R.sub.3 is carbonyl, bond or alkyl; R.sub.4 is bond or alkyl; R.sub.5 is alkyl; X is halide selected from fluoride, chloride and bromide, said method comprising the steps of: a) providing a di-imidazole unit bearing linker 2 of Formula (III) ##STR00070## b) mixing the di-imidazole of Formula (III) with an imidazolium salt that is dissolved in a suitable solvent to form a mixture; and c) stirring the mixture obtained in step (b) under conditions to obtain said oligomer.
34. The method of claim 33, wherein the di-imidazole unit bearing linker 2 of Formula (III) is selected from the group consisting of ##STR00071## or wherein the imidazolium salt is selected from the group consisting of bisimidazolium salt, trisimidazolium salt, tetraimidazolium salt, pentaimidazolium salt and hexaimidazolium salt, or wherein the solvent is selected from the group consisting of dimethylformamide (DMF), dimethyl sulfoxide (DMSO), acetone and acetonitrile.
35-36. (canceled)
37. The method of claim 33, wherein said condition in step (c) comprises a temperature of about 20 C. to about 30 C., or wherein said step (c) is undertaken for a time period in the range of about 18 hours to 60 hours.
38. (canceled)
39. A method of preparing the oligomer or the polymer of Formula (II) ##STR00072## wherein linker 1 is an alkyl-aryl-alkyl group or (C.sub.2-C.sub.8)alkene; n is an integer from 3 to 30, that is 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29 or 30; linker 2 is ##STR00073## m is 0 or 1; A is independently aryl or heteroaryl; B is independently 0, N or S; C is independently aryl or heteroaryl; R.sub.1 is a bond or alkyl; R.sub.2 is a bond, alkoxy or amine; R.sub.3 is carbonyl, bond or alkyl; R.sub.4 is bond or alkyl; R.sub.5 is alkyl; and X is halide selected from fluoride, chloride and bromide, said method comprising the steps of: a) mixing a di-imidazole unit bearing linker 2 of Formula (III): ##STR00074## with a precursor bearing linker 1 of Formula (IV):
xlinker 1x Formula IV in a suitable solvent to form a mixture; and b) stirring the mixture obtained in step (a) under conditions to obtain said polymer.
40. The method of claim 39, wherein the di-imidazole unit bearing linker 2 of Formula (III) is selected from the group consisting of ##STR00075## or wherein the precursor bearing linker 1 of Formula (IV) is selected from the group consisting of ##STR00076## or wherein the polymer of Formula (II) is selected from the group consisting of ##STR00077##
41-42. (canceled)
43. The method of claim 39, wherein said condition in step (b) comprises a temperature of about 20 C. to about 30 C., or wherein step (b) is undertaken for a period of time in the range of about 30 minutes to about 48 hours, or wherein the method optionally further comprises the step of heating said mixture.
4445. (canceled)
46. An antimicrobial gel comprising an oligomer of formula (I) ##STR00078## wherein linker 1 is an alkyl-aryl-alkyl group or (C.sub.2-C.sub.8)alkene; p and q are independently an integer from 2 to 6, that is 2, 3, 4, 5, or 6; linker 2 is ##STR00079## m is 0 or 1; A is independently aryl or heteroaryl; B is independently O, N or S; C is independently aryl or heteroaryl; R.sub.1 is a bond or alkyl; R.sub.2 is a bond, alkoxy or amine; R.sub.3 is carbonyl, bond or alkyl; R.sub.4 is bond or alkyl; R.sub.5 is alkyl; and X is halide selected from fluoride, chloride and bromide.
47. (canceled)
48. An antimicrobial composition comprising the oligomer or the polymer as defined in claim 10.
49. A method of treating a microbial infection or disease comprising administering the oligomer or polymer of claim 10 to a subject.
50. The method of claim 49, wherein said oligomer or polymer treats the infection or disease caused by a microbe that is selected from the group consisting of Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilius, Klebsiella pneumonia, Cryptococcus neoformans and Candida albicans.
51. The method of claim 50, wherein when said microbe is contacted with said antimicrobial composition at a defined concentration, the microbial activity is reduced to 1% or wherein said defined concentration of said antimicrobial composition is in the range of about 1 g/ml to about 100 g/ml.
52. A method of inhibiting a microbial activity comprising applying the antimicrobial composition of claim 10 on a surface.
53. The method of claim 52, wherein said antimicrobial composition inhibits the activity caused by a microbe that is selected from the group consisting of Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilius, Klebsiella pneumonia, Cryptococcus neoformans and Candida albicans.
54. The method of claim 53, wherein when said microbe is contacted with said antimicrobial composition at a defined concentration, the microbial activity is reduced to 1% or wherein said defined concentration of said antimicrobial composition is in the range of about 1 g/ml to about 100 g/ml.
Description
BRIEF DESCRIPTION OF DRAWINGS
[0235] The accompanying drawings illustrate a disclosed embodiment and serves to explain the principles of the disclosed embodiment. It is to be understood, however, that the drawings are designed for purposes of illustration only, and not as a definition of the limits of the invention.
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EXAMPLES
[0257] Non-limiting examples of the invention will be further described in greater detail by reference to specific Examples, which should not be construed as in any way limiting the scope of the invention.
LIST OF ABBREVIATIONS USED
[0258] ACN: acetonitrile
[0259] AcOEt: ethyl acetate
[0260] AcOH: acetic acid
[0261] NH.sub.4Cl: Ammonium chloride
[0262] AUC: area under the curve
[0263] Brine: saturated aqueous solution of NaCl
[0264] bs: broad signal (broad peak) .sup.1H NMR
[0265] cat.: catalyst
[0266] Cs.sub.2CO.sub.3: Cesium carbonate
[0267] CH.sub.2Cl.sub.2 or DCM: Methylene chloride or Dichloromethane
[0268] DBU: 1,8-Diazabicycloundec-7-ene
[0269] DCC: N,N-Dicyclohexylcarbodiimide
[0270] DI water: deionized water
[0271] DMAP: 4-Dimethylaminopyridine
[0272] DMF: N,N-dimethylformamide
[0273] DMSO: dimethylsulfoxide
[0274] DMSO-d.sub.6: per-deuterated dimethylsulfoxide
[0275] Ether: diethylether
[0276] EtOH: ethanol
[0277] HPLC: high pressure liquid chromatography
[0278] IPA: Iso-propanol (2-propanol)
[0279] KOH: Potassium hydroxide
[0280] L: litre(s)
[0281] LiAIH.sub.4: Lithium aluminium hydride
[0282] LC-MS: Liquid chromatography-mass spectrometry
[0283] Me: methyl
[0284] MeOH: methanol
[0285] m.p.: melting point
[0286] MS: mass spectrometry
[0287] NBS: N-Bromosuccinimide
[0288] Et.sub.3N: triethylamine
[0289] Na.sub.2CO.sub.3: Sodium carbonate
[0290] NaHCO.sub.3: Sodium bicarbonate
[0291] NaH: Sodium hydride
[0292] NaOH: Sodium hydroxide
[0293] Na.sub.2SO.sub.4: Sodium sulphate
[0294] NIS: N-iodosuccinimide
[0295] NMM: N-methylmorpholine
[0296] NMR: Nuclear Magnetic Resonance
[0297] Pd(dppf)Cl.sub.2: [1,1-Bis(diphenylphosphino)ferrocene]dichloropalladium(II)
[0298] Rt: room temperature
[0299] TBAF: Tetra-butyl-ammonium iodide
[0300] TEA: triethylamine
[0301] THF: tetrahydrofuran
[0302] TLC: thin layer chromatography
[0303] TMS: trimethylsilyl
[0304] SOCl.sub.2: Thionyl chloride
Materials and Methods
[0305] All anhydrous solvents were purchased from Sigma-Aldrich Corp. (St. Louis, Mo., U.S.A.) and used without further purification. All other reagents were used as received, except where otherwise noted in the text below.
[0306] Analytical thin layer chromatography (TLC) was performed using Merck 60 F-254 silica gel plates with visualization by ultraviolet light (254 nm) and/or heating the plate after staining with a solution of 20% KMnO4 w/v in H.sub.2O. Flash column chromatography was carried out on Kieselgel 60 (0.040-0.063 mm) supplied by Merck (Burlington, Mass., U.S.A.) under positive pressure.
[0307] .sup.1H and .sup.13C nuclear magnetic resonance (NMR) spectra were recorded on Bruker AV-400 (400 MHz) spectrometer. Chemical shifts () are reported in parts per million (ppm) with the residual solvent peak of tetramethylsilane used as the internal standard at 0.00 ppm. .sup.1H NMR data are reported in the following order: chemical shift, multiplicity (br=broad, s=singlet, d=doublet, t=triplet, q=quartet and m=multiplet), coupling constants (J, Hz), integration and assignment. High resolution mass spectra (HRMS) were recorded on a Bruker MicroTOF-Q system. The samples were directly injected into the chamber at 20 L.Math.minutes.sup.1. Typical instrument parameters: capillary voltage, 4 kV; nebulizer, 0.4 bars; dry gas, 2 L.Math.minutes.sup.1 at 120 C.; m/z range, 403000.
Example 1Antimicrobial Studies
Minimum Inhibitory Concentration
[0308] Staphylococcus aureus (ATCC 6538, Gram-positive), Escherichia coli (ATCC 8739, Gram-negative), Pseudomonas aeruginosa (Gram-negative), and Candida albicans (ATCC 10231, fungus) were used as representative microorganisms to challenge the antimicrobial functions of the imidazolium salts. All bacteria and fungus were stored frozen at 80 C., and were grown overnight at 37 C. in Mueller Hinton Broth (MHB) prior to experiments. Fungus was grown overnight at 22 C. in Yeast Mold (YM) broth. Subsamples of these cultures were grown for a further 3 hours and diluted to give an optical density value of 0.07 at 600 nm, corresponding to 310.sup.8 CFU mL.sup.1 for bacteria and 10.sup.6 CFU mL.sup.1 for fungus (McFarland's Standard 1; confirmed by plate counts).
[0309] The oligomers were dissolved in MHB or YM broth at a concentration of 4 mg mL.sup.1 and the minimal inhibitory concentrations (MICs) were determined by microdilution assay. Bacterial solutions (100 L, 310.sup.8 CFU mL.sup.1) were mixed with 100 L of oligomer solutions (normally ranging from 4 mg mL.sup.1 to 2 g mL.sup.1 in serial two-fold dilutions) in each well of the 96-well plate. The plates were incubated at 37 C. for 24 hours with constant shaking speed at 300 rpm. The MIC measurement against Candida albicans is similar to bacteria except that the fungus solution is 10.sup.6 CFU mL.sup.1 in YM and the plates were incubated at room temperature.
[0310] The minimum inhibitory concentrations were taken as the concentration of the antimicrobial oligomer at which no microbial growth was observed with the microplate reader. PBS solution containing microbial cells alone were used as negative controls. The assay was performed in four replicates and the experiments were repeated at least two times.
Resistance Studies
[0311] The method was adapted from that of Yang and co-authors with modification [K. Fukushima, S. Liu, H. Wu, A. C. Engler, D. J. Coady, H. Maune, J. Pitera, A. Nelson, N. Wiradharma, S. Venkataraman, Y. Huang, W. Fan, J. Y. Ying, Y. Y. Yang, J. L. Hedrick. Nature Comm, 2013, 4:2861]. Drug resistance was induced by treating S. aureus repeatedly with degradable oligomers. First MICs of the tested oligomers were determined against S. aureus using the broth microdilution method. Then serial passaging was initiated by transferring bacterial suspension grown at the sub-MIC of the oligomers ( of MIC at that passage) and was subjected to another MIC assay. After 24 hours incubation period, cells grown at the sub-MIC of the test compounds/antibiotics were once again transferred and assayed for MIC. The MIC against S. aureus was tested for 16 passages.
[0312] Drug-resistant behaviour of S. aureus was evaluated by recording the changes in the MIC normalized to that of the first passage. Conventional antibiotics vancomycin was used as the control.
Time Kill Kinetics
[0313] The microbes were treated with oligomers at 4MIC concentration, and samples were taken out of each well at different intervals. 100 L of cell suspension was removed, rescued by a series of 10- fold dilutions with growth medium. For plating, 100 L of the diluted samples was spread on growth medium agar plates and colonies were counted after overnight incubation at 37 C.
Monitoring the Changes of Antimicrobial Activity during Degradation
[0314] The changes of antimicrobial activity during degradation were monitored by measuring MIC during the process. The degradable oligomers were dissolved in Sorenson's phosphate buffer (pH 6.0, 7.0, 8.0, 100 mM), tris buffer (pH 8.0, 100 mM), and saline solutions. Stock solutions were 4 mg/ml. The solution was stored at 25 C. and the MIC against E.coli and S. aureus were measured at different intervals.
Well Diffusion Assay
[0315] The degradable oligomers were dissolved in ethanol and glycerol at 0.5% w/v concentration. Agar plates were inoculated with bacteria and 6 mm wells were cut, into which 20 L of solution was added. Plates were inoculated at 37 C. for 24 hours and zone of inhibitions measured using a pair of vernier calipers.
Haemolysis
[0316] Fresh rat red blood cells (RBCs) were diluted with PBS buffer to give an RBC stock suspension (4 vol % blood cells). A 100 L aliquot of RBC suspension was added into a 96-well plate containing 100 L oligomer solutions of various concentrations (ranging from 4 mg mL.sup.1 to 2 g mL.sup.1 in serial two-fold dilutions in PBS). After 1 hour incubation at 37 C., the contents of each well were pipetted into a micro-centrifuge tube and centrifuged at 2000 rpm for 5 minutes. Aliquots (100 L) of the supernatant were transferred to a new 96-well plate. Haemolytic activity was determined as a function of haemoglobin release by measuring OD576 of 100 L of the supernatant using a microplate reader (TECAN). A control solution that contained only PBS was used as a reference for 0% haemolysis. Absorbance of red blood cells lysed with 0.5% Triton-X was taken as 100% haemolysis. The data were expressed as mean and S.D. of four replicates, and the tests were repeated two times.
Example 2Degradable Imidazolium Oligomers
Evaluation of Antimicrobial Properties
[0317] The antimicrobial activities of novel imidazolium oligomers, polymers and their degradation products were evaluated against four different and clinically relevant microbes: S. aureus, E. coli, P. aeruginosa, and C. albicans. The toxicities of these compounds were also evaluated by measuring the extent of hemolysis induced by the oligomers and their degradation products. The minimum inhibitory concentration (MIC) values of all four oligomers are presented in Table 1. All four compounds were generally active against these microbes. IBN-CC8 displayed the lowest MIC value among the four oligomers which was similar to or slightly higher than (depending on microbe strain) the original IBN-C8 oligomer. Interestingly, carbonate oligomer IBN-CC8 also showed low toxicity with HC.sub.10 greater than 2000 g/ml. In contrast, degradation product (F1-CH2OH) of IBN-CC8 was essentially inactive against these microbes and did not induce hemolysis at the highest concentration measured (2000 g/ml). All these results indicate that IBN-CC8 with carbonate linkage is the most promising degradable antimicrobial compound.
TABLE-US-00001 TABLE Minimum inhibitory concentrations (MIC) of the degradable oligomers and their degradation products. MIC (g/ml) HC.sub.10 Entry Compound E. coli S. aureus P. aeruginosa C. albicans (g/ml) 1 IBN-CC8 8 8 125 31 >2000 2 IBN-EC8 8 16 31 125 1000 3 IBN-UC8 8 8 500 62 2000 4 IBN-HC8 8 16 125 125 >2000 5 F1-CH.sub.2OH 2000 >2000 2000 250 >2000 6 F1-COOH 31 62 >2000 500 7 F1-CH.sub.2NH.sub.2 16 125 250 62 1000 8 Vancomycin 2 >2000
[0318] Time kill studies of the imidazolium oligomers IBN-CC8, IBN-EC8 and IBN-C8 against E. coli are shown in
Degradation Profile
[0319] Theoretically, carbonate, ester, urea and hemiaminal linkers have different degradation pathways, products and conditions, with potential degradation products listed in Scheme 1.
##STR00036## ##STR00037##
[0320] The degradation profiles of each linker were investigated under different conditions using NMR analysis. It was found that urea and hemiaminal oligomers, IBN-UC8 and IBN-HC8, were not significantly degraded in pH 6-8 buffered solutions under ambient conditions. Carbonate-linked oligomer (IBN-CC8) degraded under these conditions and the degradation rate was found to be sensitive to pH: the half-life of IBN-CC8 in Sorenson's phosphate buffer (100 mM) was about 18 days at pH 8, 90 days at pH 7, and >90 days at pH 6 (
[0321] Over the course of degradation, conversion of the active oligomers to less active degradation product(s) is expected to be reflected in changes to the MIC values. To determine if this was indeed the case, IBN-CC8 was dissolved in buffer solution and its MIC values against E. coli and S. aureus were monitored at different time points (
[0322] In Sorenson's phosphate buffer (pH 8), the MIC of IBN-CC8 against E. coli doubled from 32 g/ml at day 0 to 64 g/ml after 30 days (
Drug Resistance Development Study
[0323] The potential for bacterial cells to develop resistance following multiple exposure to oligomers IBN-CC8, IBN-EC8, IBN-HC8 and IBN-UC8 and vancomycin was investigated by the serial passage of S. aureus under sub-MIC levels of each oligomer. MIC values were measured after each passage. As shown in
Gel Formation
[0324] In accordance to the previously reported main-chain imidazolium oligomers, these new imidazolium oligomers as defined herein also formed gels in alcohols (
TABLE-US-00002 TABLE 2 Critical gelation concentrations (wt %) of the degradable oligomers in alcohols. ethanol n-propanol n-butanol IBN-CC8 2.0 2.0 x IBN-EC8 2.0 1.5 1.5 IBN-HC8 1.5 0.5 1.0
Antimicrobial Activity in Alcohol Solvents
[0325] The compatibility of degradable imidazolium oligomers IBN-HC8, IBN-EC8 and IBN-CC8 in alcohol solvents commonly employed for skin disinfection was evaluated by well diffusion assay. At concentrations of 0.5% w/v in ethanol, IBN-HC8 and IBN-EC8 elicited larger zones of inhibition than ethanol on its own against E. coli and S. aureus, and comparable zones of inhibition compared to ethanol against P. aeruginosa (
[0326] Glycerol is included in some skin disinfectant products to prevent drying of skin, but has been reported to decrease the efficacy of alcohol-based hand disinfectants. When employed as a 0.5% w/v solution in glycerol, IBN-HC8 and IBN-EC8 displayed comparable efficacy against E. coli, S. aureus and P. aeruginosa as their solutions in ethanol (
Example 3Degradable Imidazolium Polymers
Evaluation of Antimicrobial Properties
[0327] All five polymers with a carbonate linkage demonstrated high antimicrobial activity when tested against the four microbes while their degradation products were inactive (Table 3 and
TABLE-US-00003 TABLE 3 Minimum inhibitory concentrations (MIC) of imidazolium polymers and degradation products. MIC (g/ml) HC.sub.10 Entry Polymer E. coli S. aureus P. aeruginosa C. albicans (g/ml) 1 IBN-CP1 16 16 31 125 1000 2 F-diol1 >2000 125 2000 >2000 >2000 3 IBN-CP2 31 31 62 125 500 4 F-diol2 >2000 2000 >2000 >2000 >2000 5 IBN-CP3 8 8 31 125 1000 6 IBN-CP3-CI 4 8 16 31 N.D. 7 F-diol3 >2000 500 >4000 >2000 >2000 8 IBN-CP4 16 16 62 125 >2000 9 F-diol4 1000 250 >2000 >2000 N.D. 10 IBN-CP5 16 16 125 >125 >2000 11 F-diol5 250 125 >2000 >2000 >2000 12 IBN-HP 31 62 31 31 >2000 13 PIM-45 8 8 31 31 >2000 N.D. = not determined.
[0328] Time kill studies of the two most effective imidazolium polymers, IBN-CP3 and IBN-CP3-CI were carried out against E. coli. Both polymers displayed fast killing properties even at low concentration of 4 g/ml (
TABLE-US-00004 TABLE 4 Minimum inhibitory concentrations (MIC) of IBN-CP1 with different chain lengths.
TABLE-US-00005 TABLE 5 Minimum inhibitory concentrations (MIC) of IBN-CP3 with different chain lengths.
TABLE-US-00006 TABLE 6 Minimum inhibitory concentrations (MIC) of IBN-CP3-Cl with different chain lengths.
Degradation Profile
[0329] Imidazolium polymers with carbonate linkages were also found to degrade at neutral and basic conditions. 50% of the carbonate linkages in IBN-CP1 degraded within 17 days at pH 8 (
[0330] Over the course of degradation, conversion of the active polymers to less active degradation products was expected to be reflected in changes to the MIC values. To determine if this was indeed the case, IBN-CP1 and IBN-CP3 were dissolved in buffer solution and their MIC values against E. coli and S. aureus were monitored at different time points (
[0331] In Sorenson's phosphate buffer (pH 8), the activity of IBN-CP1 against S. aureus was halved after 14 days and was halved again at day 28 (
Drug Resistance Development Study
[0332] The potential for bacteria to develop resistance to carbonate polymers IBN-CP1 and IBN-CP3 were evaluated using the same procedure as for the oligomers. Fluoroquinolone antibiotic norfloxacin was adopted as a control. As shown in
Example 4Characterization of Gels
Preparation of the Gels
[0333] Gels were prepared by weighing the imidazolium oligomers directly into 4 mL glass vials and subsequently adding a known weight or volume of the solvent. The vials containing both the imidazolium and the solvent were either heated or sonicated to aid the dissolution process. The vials were left standing over night at ambient conditions. The gel state was evaluated by the stable-to-inversion-of-a-test-tube method. The critical gelation concentration (CGC) is defined as the lowest concentration of the gelator which leads to a stable gel.
Rheological Characterization of the Gels
[0334] Rheological measurements were performed with a control strain rheometer (ARES G2, U.S.A.) equipped with a plate-plate geometry of 8 mm diameter. Measurements were taken by equilibrating the gels at 25 C. between the plates at a gap of 1.0 mm. Strain-amplitude sweeps were performed at angular frequency of 10 rad/s. The shear storage modulus (G) and loss modulus (G) were measured at each point.
[0335] Frequency sweeps for IBN-CC8 (4.0 wt %) and IBN-HC8 (2.0 wt %) in alcohols were performed at strain amplitude of 2% and 5%, respectively, to ensure the linearity of viscoelasticity. The dynamic storage modulus (G) and loss modulus (G) were examined as a function of frequency from 0.1 to 100 rad/s. In addition, viscosity of the gel was also examined as a function of shear rate from 0.1 to 50/s.
[0336] To test the thermal stability of the gels, the storage and loss moduli of IBN-CC8 (4.0 wt %) and IBN-HC8 (2.0 wt %) in alcohols were measured from a temperature ramp performed at 2% strain and 5% strain, respectively. The heating rate was 2 C./min.
SEM Observation for Gels and Bacteria
[0337] The morphologies of the organogel microstructure were observed using a field emission SEM (JEOL JSM-7400F) operated at an accelerating voltage of 5 keV. The gels were dried via supercritical drying, and stored in under anhydrous conditions, either in a glovebox or a desiccator prior to imaging.
[0338] Bacterial cells (310.sup.8 CFU/mL) grown in MHB without or with the oligomers at 4MIC for 2 minutes were collected and centrifuged at 5000 rpm for 5 minutes. The precipitates were washed twice with PBS buffer. Then the samples were fixed with glutaraldehyde (2.5%) for 2 hours followed by washing with DI water. Dehydration of the samples was performed using a series of ethanol/water solution (35%, 50%, 75%, 90%, 95% and 100%). The dehydrated samples were mounted on copper tape. After drying for 2 days, the samples were further coated with platinum for imaging with JEOL JSM-7400F (Japan) field emission scanning electron microscope operated at an accelerating voltage of 5 keV.
Statistical Analysis
[0339] Data are expressed as means standard deviation of the mean (S.D. is indicated by error bars). Student's t-test was used to determine significance among groups. A difference with P0.05 was considered statistically significant.
Example 5
Structural Design
[0340] The concept for the design of new imidazolium antimicrobial materials is to introduce degradable linkers in a manner that retains the excellent bactericidal properties of the imidazolium polymers and oligomers. To realize this target, key hydrophobic linkers were replaced with degradable functional groups while conserving the imidazolium main-chain. In the imidazolium oligomer series, the central o-xylene linker was replaced with a carbonate, hemiaminal, ester, or urea linker (Scheme 2a). In the imidazolium polymer series, either one of the butenyl- or xyl- linkers was replaced with a carbonate or hemiaminal linker (Scheme 2b). With these structural modifications, various novel imidazolium oligomers and polymers with degradable linkers were synthesized.
##STR00043##
Materials Synthesis
[0341] The synthesis of new imidazolium oligomers started with the synthesis of di-imidazole units (Scheme 3, compounds 3, 7, 9 and 14) containing potential degradable linkers (Scheme 3).
##STR00044## ##STR00045##
[0342] The final oligomers were then prepared by the reaction of di-imidazoles with fragment 16 (Scheme 4) to give imidazolium oligomers IBN-CC8, IBN-EC8, IBN-UC8 and IBN-HC8. The new imidazolium polymers were synthesized by the condensation of dibromides with di-imidazole 3 or 14 to give polymers IBN-CP1-3 and IBN-HP (Scheme 5). Detailed synthetic procedures and characterizations are described as herein.
##STR00046##
##STR00047##
Synthesis of Degradable Linkers
[0343] ##STR00048##
[0344] [4-(1H-Imidazol-1-yl)methylphenyl]methanol (2). A two-neck round-bottom flask fitted with a dropping funnel and reflux condenser was filled with imidazole (871 mg, 12.8 mmol) and powdered KOH (1.16 g, 16.6 mmol). Acetonitrile (70 mL) was added to the flask and the mixture was stirred at room temperature over 1 hour. The dropping funnel was then charged with a solution of benzyl chloride 1 (2.00 g, 12.8 mmol) in acetonitrile (57 mL) that was added dropwise to the stirring mixture. Upon complete addition, the reaction mixture was stirred at reflux over 16 hours, then cooled to room temperature and concentrated under reduced pressure. The resultant solids were dissolved in chloroform (20 mL) and washed with water (20 mL). The aqueous layer was then extracted with ethyl acetate (220 mL). The combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure to obtain benzyl alcohol 2 as a yellow oil (2.31 g, 12.3 mmol, 96%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.42 (s, 1H, lmH), 7.33 (d, J=8.0 Hz, 2H, PhH), 7.08 (d, J=8.0 Hz, 2H, PhH), 6.97 (t, J=1.0 Hz, 1H, lmH), 6.85 (d, J=1.0 Hz, 1H, lmH), 5.04 (s, 1H, NCH.sub.2), 4.66 (s, 1H, OCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 141.4, 137.4, 135.3, 129.7, 127.5, 119.3, 64.6, 50.6.
[0345] Bis[4-(1H-Imidazol-1-yl)methylbenzyl] carbonate (3). To a solution of benzyl alcohol 2 (1.20 g, 6.35 mmol) in anhydrous THF (20 mL) at 0 C. was added 1,1-carbonyldiimidazole (CDl, 1.03 g, 6.35 mmol) in one portion. The solution was stirred and warmed to room temperature over 2 hour. In the meantime, a second solution of benzyl alcohol 2 (1.20 g, 6.35 mmol) in anhydrous THF (20 mL) was cooled to 0 C. NaH (60% dispersion in mineral oil, 254 mg, 6.35 mmol) was added to the second solution and the mixture was stirred at 0 C. for 30 minutes. The solution of benzyl carbamate was then added slowly to the solution of deprotonated benzyl alcohol at 0 C. and the resulting mixture was warmed to room temperature over 1 hour. The reaction mixture was diluted with ethyl acetate (10 mL) and quenched with saturated aqueous NH.sub.4Cl (50 mL) The aqueous layer was extracted with ethyl acetate (230 mL) and the combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The resulting crude material was purified by column chromatography (1% MeOH in CHCl.sub.3) to obtain carbonate 3 as an off-white solid (1.90 g, 4.72 mmol, 74%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.54 (s, 2H, lmH), 7.36 (d, J=8.0 Hz, 4H, PhH), 7.14 (d, J=8.0 Hz, 4H, PhH), 7.09 (s, 2H, lmH), 6.89 (s, 2H, lmH), 5.15 (s, 4H, OCH.sub.2), 5.12 (s, 4H, NCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 154.9, 137.4, 136.6, 135.2, 129.9, 128.9, 127.5, 119.3, 69.2, 50.4.
##STR00049##
[0346] [2-(1H-Imidazol-1-yl)methylphenyl]methanol (2a). A two-neck round-bottom flask fitted with a dropping funnel and reflux condenser was filled with imidazole (722 mg, 10.6 mmol) and powdered KOH (774 mg, 13.8 mmol). Acetonitrile (46 mL) was added to the flask and the mixture was stirred at room temperature over 1 hour. The dropping funnel was then charged with a solution of benzyl chloride 1a (1.75 g, 10.6 mmol) in acetonitrile (23 mL) that was added dropwise to the stirring mixture. Upon complete addition, the reaction mixture was stirred at reflux over 48 hours, then cooled to room temperature and concentrated under reduced pressure. The resultant solids were dissolved in chloroform (50 mL) and washed with water (50 mL). The aqueous layer was then extracted with ethyl acetate (250 mL). The combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The resulting crude material was purified by column chromatography (5% MeOH in CH.sub.2C.sub.12) to obtain benzyl alcohol 2a as a colourless oil (1.01 g, 5.37 mmol, 51%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.40 (d, J=7.5 Hz, 1H, PhH), 7.38 (s, 1H, lmH), 7.35-7.26 (m, 3H, PhH), 7.01 (d, J=7.5 Hz, 1 H, PhH), 6.98 (s, 1 H, lmH), 6.87 (s, 1 H, lmH), 5.25 (s, 1H, NCH.sub.2), 4.63 (s, 1 H, OCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 138.8, 137.4, 134.3, 129.1, 128.9, 128.7, 128.6, 128.4, 119.5, 62.7, 48.1
[0347] Bis[2-(1H-Imidazol-1-yl)methylbenzyl] carbonate (3a). To a solution of 1,1-carbonyldiimidazole (CDl, 539 mg, 3.33 mmol) in anhydrous THF (2 mL) was added a solution of benzyl alcohol 2a (250 mg, 1.33 mmol) in anhydrous THF (4 mL). The solution was stirred at room temperature over 3 hours. The reaction mixture was diluted with ethyl acetate (10 mL) and washed with saturated aqueous NaHCO.sub.3 (210 mL). The organic layer was dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The residue obtained was dissolved in THF (13 mL). To this solution was added benzyl alcohol 2a (250 mg, 1.33 mmol) and Cs.sub.2CO.sub.3 (867 mg, 2.66 mmol). The reaction mixture was stirred at room temperature over 20 hours. The reaction mixture quenched with saturated aqueous NH.sub.4Cl (30 mL), and the aqueous layer was extracted with ethyl acetate (320 mL). The combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The resulting crude material was purified by column chromatography (5% MeOH in CH.sub.2C.sub.12) to obtain carbonate 3a as an viscous yellow oil (220 mg, 0.547 mmol, 41%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.51 (s, 2H, lmH), 7.44-7.41 (m, 2H, PhH), 7.39-7.34 (m, 4H, PhH), 7.07 (s, 2H, lmH), 7.04-7.01 (m, 2H, PhH), 6.87 (s, 2H, lmH), 5.23 (s, 4H, OCH.sub.2), 5.14 (s, 4H, NCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 154.5, 137.5, 135.1, 132.5, 130.8, 129.9, 129.8, 128.72, 128. 70, 119.3, 67.3, 48.0.
##STR00050##
[0348] 4-[(1H-Imidazol-1-yl)methyl]benzonitrile (5). To a solution of benzyl bromide 4 (3.00 g, 15.3 mmol) in acetonitrile (50 mL) in a two-neck round-bottom flask fitted with a reflux condenser was added imidazole (3.10 g, 45.9 mmol) followed by solid K.sub.2CO.sub.3 (10.6 g, 76.5 mmol). The reaction mixture was stirred at reflux over 16 hours, then cooled to room temperature and filtered through cotton wool. The filtrate was concentrated and the resultant solids were re-dissolved in dichloromethane (50 mL). The organic solution was washed with saturated aqueous sodium carbonate solution (230 mL), dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure to obtain benzonitrile 5 as a yellow powder (2.01 g, 11.0 mmol, 72%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.66 (d, J=8.5 Hz, 2H, PhH), 7.57 (s, 1 H, lmH), 7.22 (d, J=8.5 Hz, 2H, PhH), 7.14 (s, 1H, lmH), 6.91 (s, 1H, lmH), 5.21 (s, 2H, NCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 141.6, 137.6, 132.9, 130.5, 127.6, 119.3, 118.3, 112.4, 50.2.
[0349] 4-[(1H-Imidazol-1-yl)methyl]benzoic acid (6). Benzonitrile 5 (100 mg, 0.546 mmol) was dissolved in 37% concentrated hydrochloric acid (1.5 mL) and stirred at reflux for 3 hours. The solution was cooled to room temperature then concentrated under reduced pressure to obtain carboxylic acid 6 as a white solid (130 mg, 0.546 mmol, quant.). .sup.1H NMR (400 MHz, d.sub.4-MeOD) 7.86 (d, J=8.5 Hz, 2H, PhH), 7.78 (s, 1H, lmH), 7.32 (d, J=8.5 Hz, 2H, PhH), 7.14 (s, 1H, lmH), 7.01 (s, 1H, lmH), 5.31 (s, 2H, NCH.sub.2); .sup.13C NMR (101 MHz, d.sub.4-MeOD) 171.8, 142.3, 138.8, 134.7, 129.5, 129.3, 128.5, 121.0, 51.1.
[0350] 4-[(1H-Imidazol-1-yl)methyl]benzyl 4-[(1H-imidazol-1-yl)methyl]benzoate (7). To a solution of carboxylic acid 6 (193 mg, 0.808 mmol) and DMAP (85 mg, 0.699 mmol) in anhydrous THF (35 mL) was added a solution of benzyl alcohol 2 (101 mg, 0.538 mmol) and DCC (111 mg, 0.538 mmol) in anhydrous THF (35 mL). The resulting mixture was stirred at room temperature over 12 hours then filtered through cotton wool. The filtrate was concentrated and the resultant solids were dissolved in ethyl acetate (10 mL) and washed with saturated aqueous NaHCO.sub.3 (210 mL). The organic layer was dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The resulting crude material was purified by column chromatography (0.fwdarw.5% MeOH in CHCl.sub.3) to obtain ester 7 as a white solid (94 mg, 0.252 mmol, 47%). .sup.1H NMR (400 MHz, CDCl.sub.3) 8.04 (d, J=8.0 Hz, 2H, PhH), 7.55 (s, 1 H, lmH), 7.54 (s, 1H, lmH), 7.42 (d, J=8.0 Hz, 2H, PhH), 7.20-7.16 (m, 4H, PhH), 7.10 (s, 1H, lmH), 7.08 (s, 1H, lmH), 6.89 (s, 2H, lmH), 5.34 (s, 2H, OCH.sub.2), 5.18 (s, 2H, NCH.sub.2), 5.12 (s, 2H, NCH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 165.7, 141.5, 137.5, 137.4, 136.3, 136.0, 130.4, 130.0, 129.9, 129.8, 128.8, 127.5, 127.1, 119.3, 66.3, 50.4, 50.3.
##STR00051##
[0351] 4-(1H-Imidazol-1-yl)methyl phenyl methanamine (8). To a three-neck round-bottom flask fitted with a dropping funnel and reflux condenser was added solid LiAIH.sub.4 (1.70 g, 43.9 mmol) followed by anhydrous THF (12 mL). The suspension was heated at a gentle reflux. The dropping funnel was then charged with a solution of benzonitrile 5 (2.01 g, 11.0 mmol) in anhydrous THF (35 mL), which was added dropwise to the refluxing mixture over the course of 1 hour. The resulting thick brown slurry was stirred at reflux over 16 hours, then cooled to 0 C. and quenched carefully with water (10 mL) till it formed a thick white slurry. The pH of the slurry was adjusted to 12 with 3M aqueous NaOH, and the resulting mixture was filtered through Celite that was rinsed with dichloromethane. The organic layer from the filtrate was collected, and the aqueous layer was extracted with dichloromethane (220 mL). The combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure to obtain benzylamine 8 as a yellow oil (1.81 g, 9.67 mmol, 88%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.54 (s, 1H, lmH), 7.31 (d, J=8.0 Hz, 2H, PhH), 7.13 (d, J=8.0 Hz, 2H, PhH), 7.08 (s, 1H, lmH), 6.90 (s, 1H, lmH), 5.11 (s, 2H, NCH.sub.2), 3.87 (s, 2H, CH.sub.2NH.sub.2); .sup.13C NMR (101 MHz, CDCl.sub.3) 143.4, 137.4, 134.6, 129.8, 127.7, 127.6, 119.2, 50.6, 46.0.
[0352] 1,3-Bis[4-(1H-imidazol-1-yl)methylbenzyl]urea (9). A solution of benzyl amine 8 (1.80 g, 9.82 mmol) and 1,1-carbonyldiimidazole (CDl, 1.17 g, 5.93 mmol) in anhydrous toluene (21 mL) was stirred at 70 C. for over 16 hours. The resulting mixture was cooled to room temperature and concentrated. The resultant solids were dissolved in dichloromethane (50 mL) and washed with saturated aqueous Na.sub.2CO.sub.3 (20 mL). The aqueous layer was extracted with DCM (2 x 10 mL) and the combined organic layers were dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure. The resulting crude material was purified by column chromatography (6.fwdarw.10% MeOH in dichloromethane) to obtain urea 9 as a white solid (662 mg, 1.65 mmol, 34%). .sup.1H NMR (400 MHz, CDCl.sub.3) 7.42 (s, 2H, lmH), 7.17 (d, J=8.0 Hz, 4H, PhH), 7.00 (d, J=8.0 Hz, 4H, PhH), 6.98 (s, 2H, lmH), 6.84 (s, 2H, lmH), 6.01 (t, J=5.5 Hz, 2H, NH), 5.01 (s, 4H, NCH.sub.2), 4.27 (d, J=5.5 Hz, 4H, CH.sub.2NH); .sup.13C NMR (101 MHz, CDCl.sub.3) 158.7, 140.1, 137.2, 134.8, 129.4, 127.8, 127.5, 119.4, 50.5, 43.6.
##STR00052##
[0353] 4-(1H-Imidazol-1-yl)methylphenol (11). Benzyl alcohol 10 [J. McNulty, D. McLeod; Tetrahedron Lett. 2013, 54, 6303-6306.] (1.92 g, 15.5 mmol) and imidazole (3.17 g, 46.5 mmol) were combined in vial vented by a needle and heated at 160 C. for over 30 minutes. The hot mixture was poured into boiling water (100 mL), and the hot suspension was filtered through a
[0354] Bchner funnel. The residue was rinsed with hot water (210 mL) and dried in vacuo (50 C., 10 mbar) to obtain phenol 11 as a white powder (1.92 g, 11.0 mmol, 71%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.50 (br s, 1H, OH), 7.69 (s, 1H, lmH), 7.13 (t, J=1.0 Hz, 1H, lmH), 7.10 (d, J=8.5 Hz, 2H, PhH), 6.87 (t, J=1.0 Hz, 1h, lmH), 6.72 (d, J=8.5 Hz, 2H, PhH), 5.03 (s, 2H, NCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 157.0, 137.1, 129.1, 128.6, 128.0, 119.3, 115.3, 49.1.
[0355] The spectroscopic data was found to be in agreement with that reported by McNulty and co-workers [J. McNulty, D. McLeod; Tetrahedron Lett. 2013, 54, 6303-6306.].
[0356] 1-(Chloromethyl)-1H-imidazole (13). To a solution of 1H-imidazole-1-methanol 12 [A. M. Deberardinis, M. Turlington, J. Ko, L. Sole, L Pu; J. Org. Chem. 2010, 75, 2836-2850.] (80% w/w, 1.00 g, 8.15 mmol) in anhydrous dioxane (16 mL) was added SOCl2 (1.8 mL, 24.5 mmol). The reaction mixture was stirred at room temperature over 2 hours then concentrated under reduced pressure to obtain chloride 13 as an off-white syrup (1.79 g). Analysis of the crude material by .sup.1H NMR spectroscopy (d.sub.6-DMSO) revealed chloride 13 present as its HCl salt along with imidazole hydrochloride in a 3:2 ratio (69% w/w).
[0357] 1-[4-(1H-Imidazol-1-yl)methoxybenzyl]-1H-imidazole (14). To a solution of chloride 13 (69% w/w, 1.35 g, 6.09 mmol) in EtOH (12 mL) were added phenol 11 (1.06 g, 6.09 mmol) and KOH pellets (1.03 g, 18.3 mmol). The solution was stirred under reflux for 16 hours then cooled to room temperature and filtered through cotton wool. The filtrate was concentrated and the resultant solids were re-dissolved in dichloromethane (10 mL). The organic solution was washed with water (10 mL) followed by 1 M aqueous NaOH (310 mL), dried over Na.sub.2SO.sub.4, filtered and concentrated under reduced pressure to obtain hemiaminal 14 as a yellow oil (616 mg, 2.42 mmol, 40%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 7.87 (s, 1H, lmH), 7.73 (s, 1 H, lmH), 7.34 (t, J=1.5 Hz, 1H, lmH), 7.23 (d, J=8.5 Hz, 2H, PhH), 7.16 (t, J=1.5 Hz, 1H, lmH), 7.04 (d, J=8.5 Hz, 2H, PhH), 6.92 (t, J=1.0 Hz, 1H, lmH), 6.88 (t, J=1.0 Hz, 1H, lmH), 5.98 (s, 2H, OCH.sub.2), 5.11 (s, 2H, NCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 155.4, 138.3, 137.3, 131.6, 129.2, 129.0, 128.7, 119.9, 119.5, 116.1, 72.9, 48.9.
Example 6
General Procedure For The Synthesis of Imidazolium Oligomers
[0358] Linker (1.0 eq) and bisimidazolium salt (2.4 eq) were dissolved in anhydrous DMF (0.02 M) and stirred at room temperature over 24 to 48 hours. The reaction mixture was concentrated in vacuo to approx. 5-10 mL, and the product was precipitated with acetone. The solids were spun down in a Falcon tube in a centrifuge (5000 rpm), and the supernatant was decanted. The solids were washed twice more by first being dissolved in the minimum amount of methanol, and then precipitated with acetone (total volume of 40-50 mL). The resulting solids were dried in a vacuum oven (50 C., 10 mbar) over 16 hours to obtain the imidazolium oligomers as white powders.
[0359] Where DMF was detected in NMR spectroscopic analysis of the compounds, it could be azeotropically removed with toluene. This was achieved by first dissolving the powder in the minimum amount of methanol, adding 3-4 times the volume of toluene and removing the solvents in vacuo. Repeating this step twice was usually sufficient to remove traces of DMF from the samples for biological testing.
##STR00053##
[0360] A solution of 15 [S. N. Riduan, Y. Yuan, F. Zhou, J. Leong, H. Su, Y. Zhang; Small, 2016, 12, 1928-1934] (2.63 g, 6.23 mmol) in DMF (62 mL) was added dropwise to a solution of 1,4-dibromo-p-xylene(16.4 g, 62.3 mmol) and the resulting mixture stirred at room temperature over 48 hours. The reaction mixture was concentrated in vacuo, and the product was precipitated with ether. The solids were spun down in a Falcon tube in a centrifuge (5000 rpm), and the supernatant was decanted. The solids were washed with ether followed by acetone. The resulting solids were dried in a vacuum oven (50 C., 10 mbar) over 16 hours to obtain bisimidazolium salt 16 as white solids (2.88 g, 4.44 mmol, 71%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.49 (s, 1 H, lmH), 9.39 (s, 1 H, lmH), 7.86-7.82 (m, 4H, lmH),7.51-7.40 (m, 8H, PhH), 5.45 (s, 6H, PhH), 4.71 (s, 2H, CH.sub.2Br), 4.17 (t, J=7.4 Hz, 2H, CH.sub.2N), 1.80-1.76 (m, 2H, NCH.sub.2CH.sub.2), 1.31-1.15 (m, 10H, C.sub.5H.sub.10), 0.85 (t, J=6.5 Hz, 6H, 2CH.sub.3); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 138.7, 136.4, 136.2, 135.5, 1353, 134.9, 129.9, 129.1, 128.9, 128.7, 123.0, 122.9, 122.6, 51.6, 51.5, 5 1.4, 49.0, 31.2, 29.3, 28.5, 28.3, 25.5, 22.1, 14.0.
[0361] Unreacted 1,4-dibromo-p-xylene(ca 8 equivalents) was recovered by concentrating the combined ether washings.
[0362] IBN-Carbonate-C8 (IBN-CC8) was prepared by the general procedure from carbonate linker 3 and isolated as a white powder (438 mg, 0.244 mmol, 47%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.56-9.54 (m, 4H, lmH), 9.42 (s, 2H, lmH), 7.86-7.84 (m, 12H, lmH), 7.51-7.43 (m, 24H, PhH), 5.47 (s, 20H, 10NCH.sub.2), 5.16 (s, 4H, 2OCH.sub.2), 4.17 (t, J=7.0 Hz, 4H, 2NCH.sub.2CH.sub.2), 1.80-1.77 (m, 4H, 2NCH.sub.2CH.sub.2), 1.24-1.23 (m, 20H, 2C.sub.5H.sub.10), 0.85 (t, J=6.5 Hz, 6H, 2CH.sub.3); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 154.4, 136.4, 136.2, 136.1, 135.6, 135.4, 135.4, 135.3, 135.0, 129.1, 129.0, 128.8, 128.7, 123.0, 122.9, 122.6, 68.7, 51.7, 51.6, 51.5, 49.0, 31.2, 29.3, 28.5, 28.4, 25.6, 22.1, 14.0; HRMS (ESI.sup.+) calc. for C.sub.83H.sub.100Br.sub.4N.sub.12O.sub.3 [M-2Br].sup.2+816.2361; found 816.1995.
[0363] IBN-Ester-C8 (IBN-EC8) was prepared by the general procedure from ester linker 7 and isolated as a white powder (102 mg, 0.060 mmol, 34%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.56-9.42 (m, 6H, lmH), 8.05-8.02 (m, 2H, PhH), 7.90-7.80 (m, 12H, lmH), 7.61-7.37 (m, 20H, PhH), 5.58-5.36 (m, 22H, OCH.sub.2+10NCH.sub.2), 4.18 (t, J=7.0 Hz, 4H, 2NCH.sub.2CH.sub.2), 1.82-1.75 (m, 4H, 2NCH.sub.2CH.sub.2), 1.31-1.17 (m, 20H, 2C.sub.5H.sub.10), 0.85 (t, J=6.5 Hz, 6H, 2CH.sub.3); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 165.2, 140.1, 136.7, 136.4, 136.2, 135.5, 135.4, 135.3, 129.9, 129.1, 129.0, 128.7, 128.5, 122.9, 122.6, 65.9, 51.6, 51.4, 49.0, 31.2, 29.3, 28.5, 28.3, 25.5, 22.1, 14.0; HRMS (ESl.sup.+) calc. for C.sub.82H.sub.98Br.sub.4N.sub.12O.sub.2 [M-2Br].sup.2+ 801.2309; found 801.1903.
[0364] IBN-Urea-C8 (IBN-UC8) was prepared by the general procedure from urea linker 9 and isolated as white powder (745 mg, 0.416 mmol, 75%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.57-9.38 (m, 6H, lmH), 7.86-7.82 (m, 12H, lmH), 7.51-7.21 (m, 24H, PhH), 6.65-6.57 (m, 2H, 2NH), 5.49-5.26 (m, 20H, 10NCH.sub.2), 4.23-4.16 (m, 8H, 2NHCH.sub.2+2NCH.sub.2CH.sub.2), 1.82-1.76 (m, 4H, 2NCH.sub.2CH.sub.2), 1.31-1.78 (m, 20H, 2C.sub.5H.sub.10), 0.85 (t, J=6.5 Hz, 6H, 2CH.sub.3); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 158.1, 141.8, 136.4, 136.3, 135.5, 135.3, 133.0, 129.1, 129.0, 128.5, 128.5, 127.6, 127.6, 127.5, 127.4, 122.9, 122.9, 122.6, 51.9, 51.6, 51.4, 49.0, 42.3, 31.2, 29.3, 28.5, 28.3, 25.5, 22.1, 14.0; HRMS (ESI.sup.+) calc. for C.sub.83H.sub.102Br.sub.4N.sub.14O [M-2Br].sup.2+ 815.2521; found 815.2153.
[0365] IBN-Hemiaminal-C8 (IBN-HC8) was prepared by the general procedure from hemiaminal linker 14 and isolated as a white powder (625 mg, 0.427 mmol, 50%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.74-9.35 (m, 6H, lmH), 8.00-7.77 (m, 12H, lmH), 7.52-7.45 (m, 18H, PhH), 7.19-7.12 (m, 2H, PhH), 6.26 (s, 2H, OCH.sub.2N), 5.51-5.36 (m, 18H, NCH.sub.2), 4.16 (t, J=7.0 Hz, 4H, 2NCH.sub.2CH.sub.2), 1.81-1.74 (m, 4H, 2NCH.sub.2CH.sub.2), 1.31-1.16 (m, 20H, 2C.sub.5H.sub.10), 0.84 (t, J=6.5 Hz, 6H, 2CH.sub.3); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 155.6, 136.5, 136.3, 135.6, 135.5, 135.5, 135.4, 135.4, 130.7, 130.4, 129.2, 129.2, 129.1, 123.0, 122.6, 116.5, 116.4, 75.2, 51.8, 51.7, 51.5, 51.4, 49.1, 31.2, 29.4, 28.6, 28.4, 25.6, 22.2, 14.1.
Example 7
Synthesis of Imidazolium Polymers
General Procedure For The Synthesis of Imidazolium Polymers
[0366] Linker (1.0 eq) and butenyl or xylyl dibromide (1.0 eq) were dissolved in solvent (0.2 M) in a 20-mL vial sealed with a PTFE crimp-on cap. The solution was stirred for 30 minutes to 48 hours at room temperature or with heating in a pre-heated DrySyn heating block. The reaction mixture was transferred to a 15-mL Falcon tube, dissolved in the minimum volume of methanol then precipitated with ether to form a milky white suspension. The solids were spun down in a centrifuge (7000 rpm, 3 minutes), and the supernatant decanted. The solids were washed once more and the resulting solids were dried in a vacuum oven (50 C., 10 mbar) over 16 hours to obtain the imidazolium polymers as white solids. The n integer value which is the average number is provided in each of the polymers below.
##STR00054##
[0367] IBN-Carbonate-Polymerl (IBN-CP1) was prepared by the general procedure from carbonate linker 3 (200 mg, 0.50 mmol) and trans-1,4-dibromobutene (106 mg, 0.50 mmol) in DMF (2.5 mL) at room temperature over 48 hours and isolated as a white crushable foam (144 mg, 47%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.48 (br s, 2H, lmH), 7.88-7.82 (m, 4H, lmH), 7.50-7.43 (m, 8H, 2PhH), 6.06 (br s, 2H, 2CH), 5.49 (br s, 4H, 2NCH.sub.2), 5.16 (br s, 4H, 2OCH.sub.2), 4.91 (br s, 4H, 2CHCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 154.4, 136.4, 136.0, 129.3, 128.8, 128.7, 123.0, 122.7, 68.7, 51.6, 49.8. n=11.
##STR00055##
[0368] IBN-Carbonate-Polymer 2 (IBN-CP2) was prepared by the general procedure from carbonate linker 3 (100 mg, 0.25 mmol) and ,-dibromo-p-xylene(66 mg, 0.50 mmol) in THF (1.2 mL) at 65 C. for over 1 hour and isolated as white solids (93 mg, 56%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.55 (br s, 2H, lmH), 7.88-7.83 (m, 4H, lmH), 7.54-7.36 (m, 12H, 3p-PhH), 5.51-5.42 (m, 8H, 4NCH.sub.2), 5.20-5.13 (m, 4H, 2OCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 154.8, 136.9, 136.5, 135.8, 135.4, 129.5, 129.2, 129.1, 123.4, 123.3, 69.07, 52.1, 52.0. n=6.
##STR00056##
[0369] IBN-Carbonate-Polymer 3 (IBN-CP3) was prepared by the general procedure from carbonate linker 3 (100 mg, 0.25 mmol) and ,-dibromo-o-xylene(66 mg, 0.50 mmol) in THF (1.2 mL) at 65 C. for over 1 hour and isolated as white solids (131 mg, 79%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.50-9.38 (m, 2H, lmH), 7.87-7.78 (m, 4H, lmH), 7.52-7.42 (m, 8H, 2p-PhH), 7.38-7.26 (m, 4H, o-PhH), 5.68-5.61 (m, 4H, 2NCH.sub.2), 5.49-5.44 (m, 4H, 2NCH.sub.2), 5.21-5.13 (m, 4H, 2OCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 154.4, 136.7, 136.1, 135.0, 133.0, 129.8, 128.8, 128.6, 127.7, 123.2, 122.9, 68.7, 51.7, 49.2. n=5.
##STR00057##
[0370] IBN-Carbonate-Polymer 3 CI (IBN-CP3-CI) was prepared by the general procedure from carbonate linker 3 (100 mg, 0.25 mmol) and ,-dichloro-o-xylene(44 mg, 0.25 mmol) in MeCN (1.2 mL) at 70 C. for over 12 hours and isolated as a pale yellow foam (146 mg, quant.). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.82-9.46 (m, 2H, lmH), 7.94-7.69 (m, 4H, lmH), 7.55-7.27 (m, 12H, 2p-PhH +o-PhH), 5.81-5.64 (m, 4H, 2NCH.sub.2), 5.57-5.42 (m, 4H, 2NCH.sub.2), 5.23-5.14 (m, 3.2H, 2OCH.sub.2), 4.51 (s, 0.8H, HOCH.sub.2). n=5.
##STR00058##
[0371] IBN-Carbonate-Polymer 4 (IBN-CP4) was prepared by the general procedure from carbonate linker 3a (90 mg, 0.22 mmol) and trans-1,4-dibromobutene (48 mg, 0.22 mmol) in THF (1.1 mL) at 65 C. for over 1 hour and isolated as a white crushable foam (105 mg, 76%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.43-9.27 (m, 2H, lmH), 7.86-7.76 (m, 4H, lmH), 7.52-7.41 (m, 6H, PhH), 7.29-7.23 (m, 2H, PhH), 6.04-6.03 (m, 2H, 2CH), 5.63-5.54 (m, 4H, 2NCH.sub.2), 5.35-5.32 (m, 4H, 2OCH.sub.2), 4.88-4.80 (br s, 4H, 2CHCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 153.9, 136.8, 133.6, 130.6, 130.3, 130.0, 129.6, 129.3, 129.1, 129.0, 128.1, 122.9, 67.0, 49.7, 49.0. n=5.
##STR00059##
[0372] IBN-Carbonate-Polymer 5 (IBN-CP5) was prepared by the general procedure from carbonate linker 3a (90 mg, 0.22 mmol) and ,-dibromo-o-xylene(59 mg, 0.22 mmol) in THF (1.1 mL) at 65 C. for over 1 hour and isolated as white solids (110 mg, 74%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.49-9.33 (m, 2H, lmH), 7.87-7.81 (m, 4H, lmH), 7.54-7.41 (m, 8H, PhH), 7.28-7.22 (m, 4H, PhH), 5.69-5.57 (m, 8H, 4NCH.sub.2), 5.36-5.27 (m, 4H, 2OCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 154.0, 137.2, 133.5, 133.0, 130.6, 130.3, 130.0, 129.6, 129.4, 129.1, 128.8, 123.3, 123.1, 67.0, 49.3, 49.2. n=5.
##STR00060##
[0373] IBN-Hemiaminal-Polymer (IBN-HP) was prepared by the general procedure from hemiaminal linker 14 (220 mg, 0.87 mmol) and trans-1,4-dibromobutene (185 mg, 0.87 mmol) in DMF (4 mL) at room temperature over 48 hours and isolated as a white crushable foam (201 mg, 50%). .sup.1H NMR (400 MHz, d.sub.6-DMSO) 9.70 (br s, 1 H, lmH), 9.52 (br s, 1H, lmH), 8.07 (br s, 1H, lmH), 7.90-7.82 (m, 3H, lmH), 7.54-7.52 (m, 2H, PhH), 7.22-7.20 (m, 2H, PhH), 6.31 (s, 2H, OCH2), 6.07 (br s, 2H, 2CH), 5.55 (br s, 2H, NCH.sub.2), 4.98-4.93 (m, 4H, 2CHCH.sub.2); .sup.13C NMR (101 MHz, d.sub.6-DMSO) 155.5, 137.3, 136.2, 130.6, 129.5, 129.4, 129.3, 123.1, 122.9, 122.6, 122.5, 116.3, 74.9, 51.2, 49.9, 49.7. n=6.
Example 8
Calculating Polymer Length by H.SUP.1 .NMR Spectroscopy
[0374] Compounds IBN-CP1, IBN-CP2 and IBN-CP3 were found to have imidazole terminal groups based on the analysis of the .sup.1H NMR spectrum of purified polymers. The average polymer length, in terms of the number of imidazole and imidazolium units per chain, was calculated based on the ratio of imidazolium ( 9.3-9.6 ppm) to imidazole ( 6.9 or 7.2 ppm) integral values (see
Measuring Oligomer and Polymer Degradation by .SUP.1.H NMR Spectroscopy
[0375] Sorenson's phosphate buffer (pH, 6.0, 7.0, 8.0), tris buffer (pH 6.0, 7.0, 8.0) and sodium citrate-citric acid buffer (pH 3.0, 4.0, 5.0) were prepared in deionized water at concentrations of 100 mM, as well as 10 mM for tris buffer solution. Stock solutions of the buffers were divided into 1 mL portions which were freeze-dried and dissolved in 1 mL of D.sub.2O. A 4 mg sample of imidazolium oligomer or polymer was dissolved in deuterated buffer solution with care taken to ensure complete solution of the compounds. The solution was stored at 25 C. in NMR tubes and .sup.1H NMR spectra were obtained at specific time points. It was found that 128 scans were sufficient to obtain good signal-to-noise ratio.
[0376] Degradation of the carbonate and ester-linked compounds was observed by disappearance of the signal of the methylene protons adjacent to the carbonate or ester functional group, and/or appearance of the signal of the methylene protons adjacent to the hydroxyl group in the degradation product.
INDUSTRIAL APPLICABILITY
[0377] The oligomers or the polymers as defined above may be as antimicrobial composition. The oligomers or the polymers as defined above may find a multiple number of applications in which their ability to inhibit a microbial activity. The oligomers or the polymers may also be used in treating a microbial infection or disease. The oligomers or the polymers as defined above may find a multiple number of applications in which their ability to inhibit a microbial activity or treating a microbial infection or disease comprising administering the antimicrobial composition as defined above to a subject or applying the antimicrobial composition as defined above on a surface. The use of the oligomers or the polymers as defined above may be in the manufacture of a medicament for treating a microbial infection or disease. The microbial infection or disease is caused by a microbe that is selected from the group consisting of Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, Bacillus subtilius, Klebsiella pneumonia, Cryptococcus neoformans and Candida albicans. The microbe may be contacted with the antimicrobial composition at a defined concentration and the microbial activity may be reduced to 1% or less. The oligomer of formula (I) may also be used as an antimicrobial gel.
[0378] The new imidazolium compounds as defined above may retain the excellent antimicrobial activity of the previous generation of materials against a broad range of microbes, and may possess essential degradation and non-resistance properties. Imidazolium polymers and oligomers with a carbonate linkage may have also demonstrated the best performance. The new imidazolium compounds as defined above may have tuneable degradation profiles under different conditions which would have wide ranging applications in agricultural and environmental disinfection.
[0379] The antimicrobial composition may be added to household products, sanitizers or disinfectants that can be used in a variety of settings, from imparting an antimicrobial property to clothings, household products, floors, surfaces of objects, etc, or be used in general medical applications to sterilize or sanitise surfaces (such as hospital beds, operating theatres, etc).
[0380] It will be apparent that various other modifications and adaptations of the invention will be apparent to the person skilled in the art after reading the foregoing disclosure without departing from the spirit and scope of the invention and it is intended that all such modifications and adaptations come within the scope of the appended claims.