Membrane vesicle recovery device, membrane vesicle recovery method, and membrane vesicle analysis method
10627327 ยท 2020-04-21
Assignee
Inventors
Cpc classification
B01L2300/0829
PERFORMING OPERATIONS; TRANSPORTING
B01L3/5085
PERFORMING OPERATIONS; TRANSPORTING
G01N33/6842
PHYSICS
B01L2300/165
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/0848
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/069
PERFORMING OPERATIONS; TRANSPORTING
B01L2300/161
PERFORMING OPERATIONS; TRANSPORTING
C12M47/06
CHEMISTRY; METALLURGY
International classification
B01L3/00
PERFORMING OPERATIONS; TRANSPORTING
Abstract
A membrane vesicle recovery device includes: a liquid filler; and at least a fused membrane having a lipid bilayer membrane which covers at least a part of the outer periphery of the liquid filler, in which a content of a membrane vesicle is mixed into the liquid filler through fusing of the membrane vesicle and the fused membrane.
Claims
1. A membrane vesicle recovery device, comprising: a filler; a first reaction base having a surface on which a plurality of holding sections, each of which is configured to hold the filler, is formed, the filler being in contact with each of the plurality of holding sections; a second reaction base over the first reaction base, the second reaction base facing the plurality of holding sections; a flow path between the first and second reaction bases; a fused membrane for each of the plurality of holding sections, including a lipid bilayer membrane which completely covers an outer periphery of the filler other than a portion where the filler is in contact with the respective holding section, wherein the filler fills a space surrounded by each of the respective holding sections and the fused membranes; and the filler contains a reaction reagent for biochemical analysis.
2. The membrane vesicle recovery device according to claim 1, wherein each of the plurality of holding sections is a recessed section formed in the first reaction base, in each of the recessed sections, the fused membrane comes into contact with an opening end forming a boundary between the surface and each of the recessed sections and is provided in the first reaction base so as to seal the recessed sections, and each of the recessed sections is filled with the filler.
3. The membrane vesicle recovery device according to claim 2, wherein each of the fused membranes is provided in the first reaction base so as to come into contact with a part along the opening end at an inner wall surface of the recessed sections and to individually seal each of the plurality of recessed sections.
4. The membrane vesicle recovery device according to claim 3, wherein in the first reaction base, at least the surface is hydrophobic, and a hydrophobic section of each fused membrane comes into contact with the surface.
5. The membrane vesicle recovery device according to claim 1, wherein each of the fused membranes is formed in a planar shape along a surface thereof and seals each of the recessed sections.
6. The membrane vesicle recovery device according to claim 1, wherein each of the fused membranes contains a membrane charge adjustment substance, for promoting membrane fusion between the fused membrane and a membrane vesicle, which substance is derived from a living body or an artificial vesicle and which is covered by the lipid bilayer membrane.
7. The membrane vesicle recovery device according to claim 6, wherein the membrane charge adjustment substance contains at least one of a membrane-destroying peptide, a membrane fusogenic polymer, a pH-sensitive polymer, or virus-derived membrane fusion protein.
8. The membrane vesicle recovery device according to claim 1, wherein the filler further contains a solvent.
9. The membrane vesicle recovery device according to claim 1, wherein the reaction reagent for biochemical analysis contains a pH indicator.
10. The membrane vesicle recovery device according to claim 1, wherein the filler is one of liquid, gel or sol.
11. The membrane vesicle recovery device according to claim 1, wherein the plurality of holding sections is a plurality of hydrophilic sections, the surface of the first reaction base includes hydrophobic sections surrounding the hydrophilic sections, the filler is provided in the hydrophilic sections of the first reaction base, and each of the fused membranes comes into contact with the hydrophobic sections of the first reaction base in a boundary between each of the hydrophilic sections and each of the hydrophobic sections.
12. A membrane vesicle recovery device, according to claim 1, wherein the filler is configured to be mixed with a content of a membrane vesicle through fusing of the membrane vesicle and the fused membrane.
13. A membrane vesicle recovery device, according to claim 1, wherein each of the holding sections includes a hydrophobic region and a hydrophilic region.
14. A membrane vesicle recovery device, according to claim 13, wherein the lipid bilayer membrane includes a hydrophilic section and a hydrophobic section inside the hydrophilic section, and the hydrophobic section of the lipid bilayer membrane contacts the hydrophobic region of the holding section to cover the holding section by the lipid bilayer membrane.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
First Embodiment
(27) A first embodiment of the present invention will be described.
(28) As shown in
(29) The reaction base 2 is a plate member in which a plurality of recessed sections 4 are formed on a surface 3. In the reaction base 2, an opening end 4b of a recessed section 4 and the surface 3 are hydrophobic. In this embodiment, the reaction base 2 is made of glass or silicon. A fine well which forms a recessed section 4 is produced on the surface of the reaction base 2 after the surface of the reaction base 2 is subjected to hydrophobic processing through disilazane processing. In this embodiment, an inner wall surface 4a of the recessed section 4 is hydrophilic.
(30) The fused membrane 5 is a lipid bilayer membrane which covers the recessed section 4. That is, the fused membrane 5 has a first layer 6 which is positioned at a position close to the reaction base 2 and a second layer 7 which is stacked on the first layer 6. The first layer 6 and the second layer 7 respectively have hydrophilic sections 6a and 7a and hydrophobic sections 6b and 7b. The fused membrane 5 comes into contact with the opening end 4b which forms a boundary between the recessed section 4 and the surface 3 of the reaction base 2 in the recessed section 4. The fused membrane 5 of this embodiment is coupled to a section along the opening end 4b of the recessed section 4 in the inner wall surface 4a of the recessed section 4. In addition, in this embodiment, a plurality of fused membranes 5 are respectively provided with respect to the recessed sections 4 of the reaction base 2 so as to individually block the plurality of recessed sections 4.
(31) In a recessed section 4, the hydrophobic sections of a fused membrane 5, the opening end 4b of the recessed section 4, and the hydrophobic surface 3 are coupled to each other.
(32) The filler 8 is a liquid with which the recessed section 4 is filled. In addition, the filler 8 may be a gel or sol. It is preferable that the filler 8 have a composition in which degeneration or decomposition does not occur with respect to a membrane vesicle to be recovered. In addition, the filler 8 may contain a substance for decomposing or inactivating a substance which affects analysis in the membrane vesicle to be recovered. In addition, in this embodiment, there is an aqueous solvent (not shown) on the surface opposite to the surface facing the filler 8 of the fused membrane 5.
(33) Next, a method for producing the membrane vesicle recovery device 1 of this embodiment will be described.
(34) First, the reaction base 2 is molded. The reaction base 2 is molded by disposing the recessed sections 4, which have a size large enough to house a membrane vesicle such as an exosome 11, in an array shape with respect to a base material 9 formed of plate-like glass or a plate-like resin member, as shown in
(35) The recessed sections 4 may have a shape with, for example, a diameter of 1 m and a depth of 1 m.
(36) In addition, in the case where the base material 9 is formed of a hydrophilic material, hydrophobic processing is performed on the outer surface of the base material 9 after the recessed sections 4 are molded. The hydrophobic processing is reforming of the surface, for example, disilazane processing performed on the outer surface of the base material 9.
(37) Next, as shown in
(38) Next, the fused membrane 5 which blocks a recessed section 4 is coupled to each of the recessed sections 4. The fused membrane 5 is formed of a two-dimensional solid membrane 10 (refer to
(39) In order to couple the fused membrane 5 to the reaction base 2, first, as shown in
(40) After the two-dimensional solid membrane 10 covers the recessed sections 4 and is adhered to the surface 3 of the reaction base 2, as shown in
(41) As shown in
(42) After the first layer 6 and the second layer 7 of the fused membrane 5 are formed on the surface 3 of the reaction base 2, as shown in
(43) The recessed section 4 included in the reaction base 2 in this embodiment may not be formed in the vertical direction. For example, the recessed section 4 may be formed in, for example, the horizontal direction with respect to the surface direction of the reaction base 2, as shown in
(44) That is, the reaction base 2 may have an intermediate layer 2A in which a recessed section 4 is formed and a pair of outer layers 2B interposing the intermediate layer 2A therebetween, and the fused membrane 5 may be formed in the recessed section 4 which is formed in the intermediate layer 2A. As a method for forming a lipid bilayer membrane to be provided in the reaction base 2, a method disclosed in Japanese Unexamined Patent Application, First Publication No. 2009-128206 or the like can be used in addition to the above-described method.
(45) In addition, the reaction base 2 in this embodiment need not have a recessed section 4. For example, the reaction base may have a hydrophilic section 4A and a hydrophobic section 4B on a plane, as shown in
(46) A tool having such a configuration can be produced by, for example, forming a lipid bilayer membrane on the surfaces of liquid droplets provided on a plane through the method disclosed in Japanese Unexamined Patent Application, First Publication No. 2009-128206. Specifically, after pouring the filler 8 between the outer layers 2B shown in
(47) Next, a membrane vesicle recovery method using the membrane vesicle recovery device 1 will be described.
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(49) The membrane vesicle recovery method of the present embodiment is a method for recovering a membrane vesicle which is derived from a living body or an artificial vesicle and which is covered by the lipid bilayer membrane in the membrane vesicle recovery device 1 of this embodiment.
(50) In this embodiment, an example of recovering an exosome 11 is shown as an example of recovering a membrane vesicle.
(51) First, a sample which can contain an exosome 11 is prepared. The sample which can contain an exosome 11 may be, for example, a body fluid or a culture supernatant of a culture cell. In addition, a solution which is artificially prepared and contains liposome may be used as the sample.
(52) Subsequently, the fused membrane 5 and the exosome 11 are subjected to membrane fusion by bringing the sample into contact with the fused membrane 5, as shown in
(53) In the reaction base 2 in which recessed sections 4 are arranged in an array shape, the fused membrane 5 which is formed of a lipid bilayer membrane that blocks each of the recessed sections 4 is coupled to an inner wall surface 4a (refer to
(54) Although the membrane fusion by the lipid bilayer membrane is a spontaneous nature of the lipid bilayer membrane, a repulsive force (repelling force) by a negative electric charge of a phosphate group of a phospholipid constituting the membrane blocks the membrane fusion. A negative electric charge on the membrane of the exosome 11 and a negative electric charge of the fused membrane 5 may be combined with each other in order to make the membrane vesicle such as the exosome 11 be fused into the fused membrane 5 at a high frequency. However, the negative electric charge on the exosome 11 depends on the membrane protein of the exosome 11, and therefore, the adjustment of the negative electric charge of the fused membrane 5 in combination with the exosome 11 can be complicated.
(55) It is important to shorten the physical distance between the membrane vesicle and the fused membrane 5 in order to fuse the membrane vesicle into the fused membrane 5 at a high frequency. In the case where the volume of a solution containing exosomes 11 is small, the physical distance between an exosome 11 and the fused membrane 5 is shortened, and therefore, the frequency at which the exosome 11 comes into contact with the fused membrane 5 becomes high. In addition, even in the case where the concentration of exosomes 11 in the solution containing the exosomes 11 is high, the frequency at which an exosome 11 comes into contact with the fused membrane 5 becomes high. In addition, there is also a high possibility that a plurality of exosomes 11 are recovered in one recessed section 4 if only the concentration of exosomes 11 is increased.
(56) It is possible to increase the efficiency of membrane fusion even by bringing a sample which has become acidic after adding a pH regulator that makes the sample acidic into contact with the fused membrane 5.
(57) Next, a membrane vesicle analysis method using the membrane vesicle recovery device 1 of this embodiment will be described.
(58) The membrane vesicle recovery device 1 of this embodiment can analyze molecules as constituents of an exosome 11 after trapping a membrane vesicle such as the exosome 11 in the recessed section 4.
(59) In this embodiment, by fusing the membrane vesicle such as the exosome 11 into the fused membrane 5 of the membrane vesicle recovery device 1, the content of the exosome 11 is held in the filler 8 and membrane protein or a membrane lipid of the exosome 11 is held on the fused membrane 5.
(60) Thus, it is possible to analyze the constituents of the exosome 11 in each of the recessed sections 4. Examples of analysis of transmembrane protein or the like which is held on the fused membrane 5 include immunoassay. Specific examples of the analysis method include determination of the quantity of CD9, CD63, and CD81, which are known to be highly expressed in the exosome 11. CD9, CD63, and CD81 are held on the fused membrane 5 through fusing of the exosome 11 into the fused membrane 5, and therefore, it is possible to perform quantitative determination using an anti-CD9 antibody, an anti-CD63 antibody, and an anti-CD81 antibody.
(61) According to the membrane vesicle analysis method of this embodiment, it is possible to perform detection and quantitative determination of biomolecules derived from a membrane vesicle in the recessed sections 4. Accordingly, it is possible to perform a simple and accurate analysis with high reproducibility with respect to the constituents contained in the membrane vesicle.
Second Embodiment
(62) A second embodiment of the present invention will be described.
(63) As shown in
(64) In this embodiment, the surface 3A of the reaction base 2A is hydrophilic. For example, the reaction base 2A of this embodiment is formed of a hydrophilic material. In the case where the base material of the reaction base 2A is formed of a hydrophobic material, hydrophilic processing is performed on the outer surface of the base material after recessed sections 4 are molded. The hydrophilic processing is reforming of the surface, for example, plasma processing performed on the outer surface of the base material.
(65) In this embodiment, the hydrophilic section of the fused membrane 5 is favorably coupled to the surface 3A of the reaction base 2A. Thus, the fused membrane 5 is formed in a planar shape along the surface 3A of the reaction base 2A and is formed in a series of membrane shapes which block the plurality of recessed sections 4.
(66) Even with such a configuration, the same effect as that in the above-described first embodiment is exhibited.
Third Embodiment
(67) A third embodiment of the present invention will be described.
(68) In a membrane vesicle recovery device 1B of this embodiment shown in
(69) The membrane charge adjustment substance 12 contains at least one of a membrane-destroying peptide, a membrane fusogenic polymer, a pH-sensitive polymer, and virus-derived membrane fusion protein.
(70) In the membrane vesicle recovery device 1B of this embodiment, when a solution containing exosomes is added to the fused membrane 5 so as to be brought into contact with the fused membrane 5, the membrane charge adjustment substance 12 incorporated into the fused membrane 5 promotes membrane fusion on the membrane vesicle by adjusting the membrane charge of the fused membrane 5.
(71) In this embodiment, the recovery efficiency of a membrane vesicle such as an exosome is higher compared to the above-described first and second embodiments.
Fourth Embodiment
(72) A fourth embodiment of the present invention will be described.
(73) In a membrane vesicle recovery device 1C of this embodiment shown in
(74) In addition, in this embodiment, the filler 8 may be formed in a state in which the reaction reagent for biochemical analysis 14 is dissolved in an aqueous buffer as the solvent 13, or may be formed by being processed into a gel or sol. If the filler 8 is a gel or sol, it is difficult for the reaction reagent for biochemical analysis 14 to be diffused in the water tank 100 (refer to
(75) Next, a membrane vesicle analysis method using the membrane vesicle recovery device 1C of this embodiment will be described.
(76) The membrane vesicle analysis method of this embodiment is a method for analyzing the content, membrane protein, or a membrane lipid of a membrane vesicle from a living body or an artificial vesicle and which is covered by a lipid bilayer membrane within a recessed section 4.
(77) In this embodiment, a membrane vesicle such as an exosome is fused into the fused membrane 5 in the same manner as that described in the above-described first embodiment.
(78) In this embodiment, there is a reaction reagent for biochemical analysis 14 such as an enzyme or a substrate which reacts with an analysis object in the filler 8 with which a recessed section 4 has been filled in advance. Therefore, it is possible to cause a reaction in accordance with the type of reaction reagent for biochemical analysis 14 in the recessed section 4.
(79) For example, in the case of detecting other nucleic acids such as micro RNA, an oligonucleotide, a polymerase, and a fluorescent reagent for detection may be put into the recessed section 4. Alternately, in the case of detecting protein, a homogeneous immunoassay reagent in which fluorescence resonance energy transfer (FRET) may occur through a sandwich reaction of antibodies labeled with fluorescence may be included in the recessed section 4.
(80) In this embodiment, it is possible to analyze a substance within the recessed section 4 in a state in which external impurities do not enter the recessed section 4. Therefore, it is unnecessary to perform cleaning in order to remove impurities. Therefore, it is possible to eliminate the possibility that an analysis object is degenerated or lost through cleaning. Therefore, this embodiment is excellent in analysis accuracy and reproducibility compared to a method requiring cleaning in a process of separating and purifying an exosome 11 and a process of analyzing an exosome 11.
(81) Furthermore, it is possible to rapidly perform a biochemical reaction on an analysis object incorporated into a recessed section 4 by making the recessed section 4 contain a reagent which is required for analysis. Therefore, it is possible to simply perform analysis on a substance or the like of which the activity is rapidly lost in an experiment system.
(82) Furthermore, according to the membrane vesicle recovery device 1C, the membrane vesicle recovery method, and the membrane vesicle analysis method of this embodiment, the recessed section 4 contains the reaction reagent for biochemical analysis 14, and therefore, it is possible to simply and rapidly perform analysis on constituents of a membrane vesicle such as an exosome subsequently to separation of the membrane vesicle.
(83) In addition, by performing detection of tetraspanin on the fused membrane 5 and biochemical analysis in recessed sections 4 together, it is possible to distinguish a recessed section 4 containing an exosome and a recessed section 4 containing no exosome among a plurality of recessed sections 4 on the reaction base 2 and to obtain biochemical analysis results obtained by targeting only the recessed section 4 containing an exosome.
(84) It is possible to estimate how many exosomes are contained in one recessed section 4 by determining an amount of tetraspanin in each of the recessed sections 4.
Modification Example
(85) Next, a modification example of the above-described embodiment will be described with reference to
(86) In this modification example, the reaction reagent for biochemical analysis 14 shown in
(87) In addition, by using the membrane vesicle recovery device 1 configured such that the volume of a recessed section 4 and the amount of pH indicator became constant with respect to each of the recessed sections 4, it is possible to estimate how many exosomes 11 are contained in one recessed section 4 using the pH indicator.
Fifth Embodiment
(88) A fifth embodiment of the present invention will be described.
(89) In the membrane vesicle recovery device according to this embodiment, the recessed sections may be formed of resin, glass, or the like, or may be formed of the same materials as those of the base materials. In addition, the recessed sections may be integrated with the base materials through resin molding processing or the like. The resin can be selected from cycloolefin polymers, silicon, polypropylene, polycarbonate, polystyrene, polyethylene, and polyvinyl acetate, but is not limited thereto. The base material may be formed of a material having rigidity, and may be formed of resin, glass, or the like. In the case of observing micropores through transmission, the base material may be transparent. In addition, a hydrophobic section may be formed through photolithography, and a material such as CYTOP (manufactured by Asahi Glass Co., Ltd.), which is highly hydrophobic, can be selected as the resin.
(90) Next, the membrane vesicle recovery device, the membrane vesicle recovery method, and the membrane vesicle analysis method of this embodiment will be described in more detail based on Examples shown below.
Example 11
(1) Production of Invader Reaction Reagent-Filled Well Plate which is Coated with Lipid Bilayer Membrane
(91) A plate made of PDMS and in which micropores (well and recessed sections) with a diameter of 1 m and a depth of 1 m were arranged in an array shape by imprinting were prepared. Then, only the well sections were subjected to hydrophilic processing by performing plasma processing using a plasma-generating device. One side of the plate was set to 1 cm and the thickness thereof was set to 5 mm, and 910.sup.6 wells were arranged in the center. In order to fill the wells with an invader reaction reagent (1 M allele probe, 0.4 M invader oligo, 1 M FAM label arm, 20 M MOPS pH7.5, 15 mM NaCl, 6.25 mM MgCl.sub.2, and 50 U/L cleavase), 5 L of a reagent solution was added dropwise to the plate which was then covered with a cover glass. After injecting the reagent solution into the wells under reduced pressure, the cover glass was removed and air-dried.
(92) 0.0013 g of oxotitanium phthalocyanine was dissolved in 10 mL of dichloromethane containing 0.1 mol/L trichloroacetic acid to prepare a sample solution for an LB membrane. This sample solution was added dropwise to the water surface to form a monomolecular membrane, and an LB membrane was produced using a commercially available LB membrane production device. The monomolecular membrane was transferred onto the surface of the plate by pulling up the plate in which the wells were filled with the invader reaction reagent and which had been sunk in a water tank in advance. Then, a bilayer membrane was produced after the plate was sunk in the water tank again.
(93) (2) Reaction of Oligonucleotide Sealed in Liposome
(94) An oligonucleotide as a substrate was sealed in a liposome reagent (Thermo Fisher Scientific Inc., Lipofectamine) and was then diluted in stages to obtain a sample solution as a model of an exosome. Thereafter, the sample solution was added dropwise to the top of a well plate filled with an invader reaction reagent of the above-described (1). A cover glass was placed thereon and was lightly pressed. The plate was incubated in an oven at 62 C. for 15 minutes. The fluorescent amount of wells after the reaction was measured (by obtaining an average value of each fluorescent amount of 21 pixels after selecting 5 wells) using a fluorescence microscope (Carl Zeiss, AX10), an objective lens (EC Plan-Neofluar 40oil NA 1.3), a light source (Lithium Energy Japan, FluoArc 001.26 A Usable with HBO 10), a sensor (Hamamatsu Photonics K.K., EM-CCD C9100), a filter (Olympus Corporation, U-MNIBA2), and analysis software (Hamamatsu Photonics K.K., AQUACOSMOS 2.6: exposure time of 64.3 ms, EM gain of 180, offset of 0, binning1), and the number of wells exhibiting fluorescence was measured. As a result, it was confirmed that the number of wells exhibiting a constant amount of fluorescence was increased in accordance with the amount of liposome.
Example 2
(1) Production of Membrane Vesicle Recovery Device Having Lipid Bilayer Membrane
(95) A glass base material having a thickness of 0.5 mm was spin-coated with CYTOP (manufactured by Asahi Glass Co., Ltd.) and was heat-cured for 3 hours at 180 C., and micropore chips each having one million micropores (well or recessed sections) with a diameter of 5 m were produced using a photolithography technique. A glass base material with a feeding port was provided on the top of a micropore chip such that the gap between the micropore chips and the glass base became 100 m. Accordingly, a flow path which is provided between two base materials was produced. The flow path can send a liquid to the micropores. An invader reaction reagent (1 M allele probe, 0.4 M invader oligo, 1 M FAM label arm, 20 M MOPS pH7.5, 15 mM NaCl, 6.25 mM MgCl.sub.2, and 50 U/L cleavase) was sent to the recessed sections through the sample ports, and the minute recessed sections were filled with the reaction reagent through deaeration. 40 L of hexadecane in which a mixed lipid of DOPE and DOPG is dissolved to be 4 mg/ml, was sent to the recessed sections. 40 L of a buffer (20 M MOPS pH 7.5, 15 mM NaCl, 6.25 mM MgCl.sub.2) was sent to the recessed sections.
(96) (2) Reaction of Oligonucleotide Sealed in Liposome
(97) An oligonucleotide as a substrate was sealed in a liposome reagent (Thermo Fisher Scientific Inc., Lipofectamine) to obtain a sample solution as a model of an exosome. Thereafter, the sample solution was sent to the top of the wells filled with the above-described invader reaction reagent. The sample solution was made into droplets by further sending oil to the wells. Thereafter, the wells were incubated in an oven at 62 C. for 15 minutes. The fluorescent amount of each well after the reaction was measured using a fluorescence microscope. The measurement results are shown in
(98) In the above, the embodiments and the examples of the present invention have been described in detail with respect to the drawings. However, specific configurations are not limited to these embodiments, and modifications or the like to the design can be included within a scope not departing from the gist of the present invention.
(99) For example, in the above-described embodiments 3, 4, and 5, the hydrophobic section 7b of the fused membrane 5 may be coupled to the surface 3 of the reaction base 2, as described in the above-described first embodiment.
(100) In addition, the constituents shown in each of the above-described embodiments can be configured by being appropriately combined.
(101) The present invention can be used to separate exosomes, organelles, and other membrane vesicles.
(102) In addition, the present invention can be used in the analysis of constituents of a membrane vesicle.