PROCESS TO PRODUCE MONO-RHAMNOLIPIDS
20240084353 ยท 2024-03-14
Assignee
Inventors
- Natalia Eliza Iyke DOMERADZKA (Liverpool, GB)
- Dietmar Andreas LANG (Liverpool, GB)
- Neil James PARRY (Tarporley, GB)
- Mark Lawrence THOMPSON (Ellesmere Port, GB)
Cpc classification
C12P19/44
CHEMISTRY; METALLURGY
C12N9/2402
CHEMISTRY; METALLURGY
C12P19/14
CHEMISTRY; METALLURGY
C12N11/00
CHEMISTRY; METALLURGY
International classification
C12P19/44
CHEMISTRY; METALLURGY
Abstract
The invention concerns a process to convert di-rhamnolipid to mono-rhamnolipid comprising the following process steps: (a) contact of a starting di-rhamnolipid material with an -L-rhamnosidase enzyme which is immobilised on a support; (b) separation of the produced mono-rhamnolipid from the reaction medium and/or side products; wherein the -L-rhamnosidase enzyme does not have -D-glucosidase activity.
Claims
1. A process to convert di-rhamnolipid to mono-rhamnolipid comprising the following process steps: (a) contacting a starting di-rhamnolipid material with an -L-rhamnosidase enzyme which is immobilised on a support; (b) separating a produced mono-rhamnolipid from a reaction medium and/or side products; wherein the -L-rhamnosidase enzyme does not have -D-glucosidase activity.
2. The process according to claim 1, wherein the -L-rhamnosidase enzyme is from the genus Aspergillus.
3. The process according to claim 1, wherein the enzyme is immobilised on a support using a technique selected from adsorption, covalent bonding, entrapment, crosslinking, and any combination thereof.
4. The process according to claim 1, wherein the starting di-rhamnolipid material has a carbon alkyl length of from C.sub.8 to C.sub.14.
5. The process according to claim 1, wherein the resulting mono-rhamnolipid material has a carbon alkyl length of from C.sub.8 to C.sub.14.
6. The process according to claim 1, wherein a rhamnose by-product is removed from the enzymatic reaction mixture as the reaction progresses.
7. The process according to claim 1, wherein a temperature during the reaction is from 10 to 60 C.
8. The process according to claim 1, wherein a pH during the reaction is from pH 5 to 10.
9. The process according to claim 2, wherein the -L-rhamnosidase enzyme is selected from Aspergillus niger, Aspergillus terreus, and Aspergillus lentulus.
10. The process according to claim 4, wherein the starting di-rhamnolipid material has a carbon alkyl length of from C.sub.8-C.sub.12.
11. The process according to claim 5, wherein the resulting mono-rhamnolipid material has a carbon alkyl length of from C.sub.8-C.sub.12.
12. The process according to claim 7, wherein the temperature during the reaction is from 15 to 50 C.
13. The process according to claim 7, wherein the temperature during the reaction is from 18 to 45 C.
14. The process according to claim 7, wherein the temperature during the reaction is from 20 to 45 C.
15. The process according to claim 8, wherein the pH during the reaction is from pH 5 to 9, more preferably from pH 5.5 to 8.5, most preferably from pH 6 to 8.
16. The process according to claim 8, wherein the pH during the reaction is from pH 5.5 to 8.5.
17. The process according to claim 8, wherein the pH during the reaction is from pH 6 to 8.
Description
DETAILED DESCRIPTION OF THE DRAWINGS/FIGURES
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[0022]
[0023]
[0024]
[0025]
DETAILED DESCRIPTION OF THE INVENTION
[0026] The indefinite article a or an and its corresponding definite article the as used herein means at least one, or one or more, unless specified otherwise.
[0027] wt. % relates to the amount by weight of the ingredient based on the total weight of the composition. For anionic surfactants, wt. % is calculated based on the protonated form of the surfactant.
[0028] Rhamnolipids
[0029] Rhamnolipid is a biosurfactant. These are a class of glycolipid. They are constructed of rhamnose combined with beta-hydroxy fatty acids. Rhamnose is a sugar. Fatty acids are ubiquitous in animals and plants.
[0030] Rhamnolipids are discussed in Applied Microbiology and Biotechnology (2010) 86:1323-1336 by E. Deziel et al. Rhamnolipids are produced by Evonik, Stepan, Glycosurf, AGAE Technologies and Urumqi Unite Bio-Technology Co., Ltd. Rhamnolipids may be produced by strains of the bacteria Pseudomonas aeruginosa. There are two major groups of rhamnolipids; mono-rhamnolipids and di-rhamnolipids.
[0031] Mono-rhamnolipids have a single rhamnose sugar ring. A typical mono-rhamnolipid produced by P. aeruginosa is L-rhamnosyl-p-hydroxydecanoyl--hydroxydecanoate (RhaC.sub.10C.sub.10). It may be referred to as Rha-C.sub.10-C.sub.10, with a formula of C.sub.26H.sub.43O.sub.9. Mono-rhamnolipids have a single rhamnose sugar ring.
[0032] The IUPAC Name is 3-[3-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxydecanoyloxy]decanoic acid.
[0033] Di-rhamnolipids have two rhamnose sugar rings. A typical di-rhamnolipid is L-rhamnosyl-L-rhamnosyl-p-hydroxydecanoyl--hydroxydecanoate (Rha2C.sub.10C.sub.10). It may be referred to as Rha-Rha-C-.sub.10-C-.sub.10, with a formula of C.sub.32H.sub.58O.sub.13.
[0034] The IUPAC name is 3-[3-[4,5-dihydroxy-6-methyl-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxydecanoyloxy]decanoic acid.
[0035] In practice a variety of other minor components with different alkyl chain length combinations, depending upon carbon source and bacterial strain, exist in combination with the above more common rhamnolipids.
[0036] Throughout this patent specification, we use the terms mono- and di-rhamnolipid in order to avoid possible confusion. However, if abbreviations are used R1 is mono-rhamnolipid and R2 is di-rhamnolipid.
[0037] Suitable Di-Rhamnolipid Starting Materials
[0038] Preferably the rhamnolipid is a di-rhamnolipid of formula: Rha2C.sub.8-14C.sub.8-14. The preferred alkyl chain length is from C.sub.8 to C.sub.12. The alkyl chain may be saturated or unsaturated.
[0039] The following rhamnolipids have been detected as produced by the following bacteria:
[0040] (C12:1, C14:1 indicates fatty acyl chains with double bonds).
[0041] Rhamnolipids produced by P. aeruginosa (di-rhamnolipids):
[0042] Rha-Rha-C8-C10, Rha-Rha-C8-C12:1, Rha-Rha-C10-C8, Rha-Rha-C10-C10, Rha-Rha-C10-C12:1, Rha-Rha-C-10-C-12, Rha-Rha-C-12-C-10, Rha-Rha-C-12:1-C-12, Rha-Rha-C-10-C14:1.
[0043] Rhamnolipids produced by Burkholderia pseudomallei (di-rhamnolipids):
[0044] Rha-Rha-C14-C14.
[0045] Rhamnolipids produced by Burkholderia (Pseudomonas) plantarii (di-rhamnolipids):
[0046] Rha-Rha-C14-C14.
[0047] A typical di-rhamnolipid is L-rhamnosyl-L-rhamnosyl-p-hydroxydecanoyl--hydroxydecanoate (Rha.sub.2C.sub.10C.sub.10 with a formula of C.sub.32H.sub.58O.sub.13).
[0048] Preferably the starting di-rhamnolipid material has a carbon alkyl length of from C.sub.8 to C.sub.14, more preferably from C.sub.8-C.sub.12.
[0049] Preferred Mono-Rhamnolipid Products
[0050] Preferably the resulting mono-rhamnolipid is a mono-rhamnolipid of formula: RhaC.sub.8-14C.sub.8-14. The preferred alkyl chain length is from C.sub.8 to C.sub.12. The alkyl chain may be saturated or unsaturated.
[0051] A preferred mono-rhamnolipid material is L-rhamnosyl--hydroxydecanoyl--hydroxydecanoate (RhaC.sub.10C.sub.10 with a formula of C.sub.26H.sub.48O.sub.9).
[0052] Preferably the resulting mono-rhamnolipid material has a carbon alkyl length of from C.sub.8 to C.sub.14, more preferably from C.sub.8-C.sub.12.
[0053] -L-Rhamnosidase Enzyme
[0054] By using -L-rhamnosidase enzyme that has -L-rhamnosidase activity but also does not have -D-glucosidase activity, the di-rhamnolipid starting material can be selectively converted to mono-rhamnolipid material. This selective nature of the process using an -L-rhamnosidase enzyme that has -L-rhamnosidase activity but also does not have -D-glucosidase activity, results in the desired mono-rhamnolipid material, by selective removal of one rhamnose moiety, in contrast to other enzymes which either do not convert the di-rhamnolipid material at all, or remove both rhamnose units, neither of which results in the desired mono-rhamnolipid material.
[0055] The -L-rhamnosidase enzyme is preferably from the genus Aspergillus.
[0056] Preferably the -L-rhamnosidase enzyme is from Aspergillus niger, Aspergillus terreus, or Aspergillus lentulus. More preferably the -L-rhamnosidase enzyme is from Aspergillus niger, or Aspergillus terreus.
[0057] In the process of the invention, the enzyme may suitably be immobilised.
[0058] Process Details
[0059] The invention relates to a process to convert di-rhamnolipid to mono-rhamnolipid comprising the following process steps: [0060] (a) contact of a starting di-rhamnolipid material with an -L-rhamnosidase enzyme which is immobilised on a support; [0061] (b) separation of the produced mono-rhamnolipid from the reaction medium and/or side products; [0062] wherein the -L-rhamnosidase enzyme does not have -D-glucosidase activity.
[0063] Preferably the rhamnose by-product is removed from the enzymatic reaction mixture as the reaction progresses. This can result in higher conversion and/or yield or the mono-rhamnolipid product.
[0064] Preferably in the process to produce mono-rhamnolipids, the temperature during the reaction is from 10 to 60 C., preferably from 15 to 50 C., more preferably from 18 to 45 C., most preferably from 20 to 45 C.
[0065] Preferably in the process to produce mono-rhamnolipids, the pH during the reaction is from pH 5 to 10, preferably from pH 5 to 9, more preferably from pH 5.5 to 8.5, most preferably from pH 6 to 8.
[0066] Immobilisation of Enzymes
[0067] The -L-rhamnosidase enzyme can potentially be immobilised to improve characteristics such as activity, selectivity and specificity, as well as enzyme stability. The immobilisation itself can be performed by a physical interaction between enzyme and matrix or through a chemical process such as covalent bond formation between the enzyme and support. The typical lab procedure may involve, but not be limited to adsorption, covalent bonding, entrapment, and crosslinking. These methods are described in more detail in Materials Research Foundations (2019) 44:1-28 by M. Javed et al. as well as in Reactive and Functional Polymers (2020) 152: 104613 by R. Wahab et al.
[0068] Preferably in the process to produce mono-rhamnolipids, the enzyme is immobilised on a support using a technique selected from adsorption, covalent bonding, entrapment and/or crosslinking.
[0069] Preferred commercial enzyme immobilisation materials include Praesto and Lifetech available from Purolite.
[0070] The invention will be further described with the following non-limiting examples.
EXAMPLES
[0071] Experimental Methods and Materials
[0072] Enzymes and Chemicals
[0073] Three enzyme variants with -L-rhamnosidase activity were considered in this study: [0074] (i) -L-rhamnosidase from Aspergillus niger was obtained from Megazyme LTD (Bray, Ireland), [0075] (ii) recombinant -L-rhamnosidase from Aspergillus terreus was prepared internally, following biosynthetic methodology as described by Weignerove et al. 2012 (43), and (iii) naringinase (sample outsourced, source and origin unknown).
[0076] Megazyme enzyme from A. niger was supplied as an ammonium sulphate suspension in 0.02% (w/v) sodium azide. A. terreus rhamnosidase, secreted in P. pastoris, was supplied in form of supernatant at total protein concentration of 1.7 mg/mL, and the sample for analysis was purified on the nickel column using 50 mM sodium phosphate elution buffer containing 500 mM of imidazole, Sigma Aldrich (Gillingham, United Kingdom) at pH 6.5, and dialysed against the same buffer without imidazole.
[0077] Rhamnolipid sample used in this study was obtained from Evonik (Witten, Germany), in form of 50% (w/v) water solution. The sample is a blend consisting of the various rhamnolipid congeners, with the major congener, (Rha-Rha-C10-C10),
[0078] 2-O-alpha-L-rhamnosyl-alpha-L-rhamnosyl-3-hydroxydecanoyl-3-hydroxydecanoic acid and it will be referred hereafter as RL2. This sample also contains a minor amount of rhamnosyl-3-hydroxydecanoyl-3-hydroxydecanoate congener (Rha-C10:0/C10:0), which will be referred hereafter as RL1. The expected molecular weight of RL1 is 504.321 g*mol-1, and the expected molecular weight of RL2 is 649.378 g*mol-1.
[0079] All other chemicals were obtained from Sigma Aldrich (Gillingham, United Kingdom) unless otherwise stated in the methods below.
[0080] HPLC-CAD Instrumentation and Method Parameters for Rhamnolipid Analysis
[0081] RL2 samples were diluted in acetonitrile to final concentration of 0.75 mM, filtered with 0.45 m nitrocellulose syringe filter, and applied onto column for analysis. The fractions were collected in 30 sec rate per fraction and subjected to MALDI-TOF analysis. Next, RL2 were used as substrates for enzymes from A. terreus and A. niger, and naringinase.
[0082] For each reaction, the enzymes were used in concentration 1.2 mg*mL- and substrate was used at 1 mM. Both reactions were performed in 50 mM MES buffer, pH 6.5. The total volume of the reaction mix was 1 mL. Both samples were incubated at 40 C. and 225 rpm for 24 hours in incubator shaker (Infors HT, Surrey). 100 L of reaction mixture was diluted in acetonitrile at ratio 1:10, filtered with 0.45 m nitrocellulose syringe filter, and applied onto the C18 column. The control sample (i.e. R2 benchmark) was not treated with any enzyme.
[0083] Rhamnolipid analysis was carried out using a Dionex UltiMate 3000 system (Thermo Scientific, Dreieich, Germany) composed of an RS Dual Gradient pump, an RS Autosampler, an RS Column Compartment, an RS Diode Array Detector and a Corona Veo SD Charged-Aerosol Detector (CAD). The response in this type of detector is proportional to mass of analyte reaching the detector per unit time and it is expressed in picoampere (pA).
[0084] Chromatographic separation was performed using Accucore C18 LC Column (1504.6 mm, 2.6 m) (Thermo Scientific, Dreieich, Germany) at ambient temperature. The flow rate was set to 1 mL/min. Mobile phase gradient consisting of 0.02% acetic acid/water (v/v) (A) and 100% acetonitrile (B) was used. The gradient was set to 70% B from 0 to 2 min, increased to 82% B from 2 to 4 min, remained constant for 1 min, and increased to 88% B from 5 to 8 min before it immediately decreased to 70% and remained constant for equilibration. Total run time was 12 min. The injection volume was 10 L. Charged-aerosol detection was performed at ambient temperature with an acquisition rate of 10 Hz and a filter constant of 3.6. CAD nitrogen gas pressure was 35 psi. Chromeleon V7.2 software was used for general HPLC-control, data acquisition and analysis for CAD measurements.
[0085] Analysis of RLs by Matrix-Assisted Laser Desorptionionization Time of Flight Mass Spectrometry (MALDI TOF MS)
[0086] MALDI-TOF was used for analysis RL2 fractions collected as described above. The matrix solution was 2,5-dihydroxybenzoic acid dissolved in 50% aqueous acetonitrile containing 0.1% trifluoroacetic acid (TFA). 1 L of HPLC fractionations, 1 L of matrix solution and 2 L of distilled water were mixed in an Eppendorf tube. 1 L of the matrix-sample mixture was spotted onto the stainless-steel anchor chip. The spots were air-dried at room temperature and then analysed by MALDI TOF MS, using UltraflexIII MALDI-TOF/TOF mass spectrometer (Bruker, Billerica, MA) operated with Smart beam laser system.
[0087] The rhamnolipid MS spectra were attained in a positive mode reflector; the used parameters for RLs detection were: ion source 1, 25.08 kV and 2, 21.72 kV; reflector, 26.42 kV and 13.867 kV; lens, 9.28 kV. The LIFT mode was applied for MS/MS analysis, using the following considerations: ion source 1, 8.01 kV and 2, 7.21 kV; reflector, 29.50 kV and 2, 13.91 kV; lens, 3.61 kV; LIFT 1, 19.08 kV and LIFT 2, 2.71 kV. The used mass range for measurements was m/z 300-4000 Da and a maximum MS deviation of 0.5 Da. 4000 laser shots were accumulated with increments of 200 shot, to represent the final mass spectrum. External MS calibration was conducted using peptide calibration standard II (Bruker Daltonics), FlexControl V. 3.4 software was used for system control, where FlexAnalysis V. 3.4 and BioTools V. 3.2 software were used for data processing.
[0088] Rhamnosidase Activity Assessment
[0089] -l-Rhamnosidase activity of enzyme from A. terreus and enzyme from A. niger was determined by a colorimetric method using p-nitrophenyl--l-rhamnopyranoside (pNPR) (See the chemical formula equation shown in
[0090] Influence of pH and Temperature on Rhamnosidase Activity
[0091] The analysis was performed only for -l-rhamnosidase from A. terreus. The influence of temperature change and pH change on enzyme activity was investigated using the same colorimetric method as described above (See
[0092] Influence of Rhamnose Excess on Rhamnosidase Activity
[0093] The analysis was performed only for -l-rhamnosidase from A. terreus. The influence of rhamnose excess on enzyme activity was investigated using the same colorimetric method as described above (See
[0094] -D-Glucosidase Activity Assessment
[0095] -D-glucosidase activity of enzyme from A. terreus was determined by a colorimetric method using p-nitrophenyl--l-glucopyranoside (pNPG). The pNPG substrate was first dissolved in DMSO, with concentration adjusted to 200 M in 100 mM sodium phosphate buffer pH 6.5. To analyse the substrate preference, the pNPG was mixed with pNPR at 1:1 ratio, then dissolved in DMSO, and concentration of such mixture was adjusted to 200 M in 100 mM sodium phosphate buffer pH 6.5. As a control, pNPR, prepared as above, at concentration of 200 M was used. Enzyme was diluted to concentration of 20 g/mL in 100 mM sodium phosphate buffer pH 6.5. The reactions were prepared by mixing the substrate solution with enzyme solution in 1:1 ratio. The activity assay was performed on 96-well Microtiter UV plate by Thermo Scientific (Waltham, MA USA). All reactions were done at pH 6.5 and in temperature 40 C. The changes in relative absorbance values were monitored at 405 nm for about 30 minutes in Microplate reader Varioskan Flash.
Example 1RP-HPLC Analysis of Enzymatically Treated Di-Rhamnolipids
[0096] We evaluated the ability of utilizing rhamnolipids as substrates by -L-rhamnosidase using A. terreus -L-rhamnosidase, A. niger -L-rhamnosidase and naringinase.
[0097] The substrate sample was mixed with the studied enzyme at a concentration of 1 mg/mL and reactions were performed at 40 C., in pH 6.5 for 24 hours. For the control, R2 sample was mixed with buffer only. Next, the reactions were analysed using RP-HPLC, and the control was additionally analysed using MAL-TOF, to confirm which peak corresponds to R1 and R2 congeners.
[0098] In
[0099] The chromatogram of the control sample presented two peaks at 6.5 min of retention time and 8.2 min of retention time (see
[0100] The chromatogram of the sample treated by enzyme from A. terreus revealed that only R1 peak was detected (see
Example 2Activity of -L-Rhamnosidase Enzymes of Different Origin
[0101] The relative activity of -L-rhamnosidase from A. terreus and -L-rhamnosidase from A. niger were measured against the p-NPR. The reaction was monitored in time at 40 C. and pH 6.5 (See
Example 3Influence of Rhamnose on Rhamnosidase Activity
[0102] The relative activity of -L-rhamnosidase from A. terreus was measured using pNPR substrate in the excess of rhamnose in the reaction mix. The analysis was performed in order to study product inhibition phenomenon. The monitoring of the enzyme activity in the reactions with various rhamnose concentrations has showed that the substrate conversion rate decreased in the reactions with increasing amount of rhamnose added (See
Example 4-D-Glucosidase Activity Assessment
[0103] pNPG was used as a substrate to monitor -D-glucosidase activity of enzyme from A. terreus, the pNPR was used as a substrate showing -l-rhamnopyranoside activity, and mixture of both substrates was used to determine substate preference (see