IL2RBETA/COMMON GAMMA CHAIN ANTIBODIES
20240052046 ยท 2024-02-15
Assignee
Inventors
- Peter Brauer (Singapore, SG)
- John Edward Connolly (Singapore, SG)
- Richard HOPKINS (Singapore, SG)
- Junyun Lai (Singapore, SG)
- Jianrong Lionel Low (Singapore, SG)
- Kar Wai Tan (Singapore, SG)
- Cheng-I Wang (Singapore, SG)
- Siok Ping Yeo (Singapore, SG)
Cpc classification
C07K16/468
CHEMISTRY; METALLURGY
A61K39/4611
HUMAN NECESSITIES
C07K16/2866
CHEMISTRY; METALLURGY
Y02A50/30
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
C07K2317/33
CHEMISTRY; METALLURGY
C07K2317/92
CHEMISTRY; METALLURGY
A61P35/00
HUMAN NECESSITIES
International classification
C07K16/28
CHEMISTRY; METALLURGY
A61P35/00
HUMAN NECESSITIES
Abstract
Antigen binding molecules capable of binding to CDI22 and/or common y chain (CDI32) are disclosed herein. Also disclosed are compositions comprising such antigen binding molecules, and uses and methods using the same.
Claims
1. An antigen-binding molecule, optionally isolated, which is capable of binding to common ? chain (CD132), wherein the antigen-binding molecule comprises: (P1A10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 196 HC-CDR2 having the amino acid sequence of SEQ ID NO: 204 HC-CDR3 having the amino acid sequence of SEQ ID NO: 212; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 227 LC-CDR2 having the amino acid sequence of SEQ ID NO: 238 LC-CDR3 having the amino acid sequence of SEQ ID NO: 248; or (P1B6) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 213; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 239 LC-CDR3 having the amino acid sequence of SEQ ID NO: 249; or (P1C10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 112 HC-CDR2 having the amino acid sequence of SEQ ID NO: 124 HC-CDR3 having the amino acid sequence of SEQ ID NO: 214; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 228 LC-CDR2 having the amino acid sequence of SEQ ID NO: 240 LC-CDR3 having the amino acid sequence of SEQ ID NO: 250; or (P1D7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 197 HC-CDR2 having the amino acid sequence of SEQ ID NO: 206 HC-CDR3 having the amino acid sequence of SEQ ID NO: 215; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 229 LC-CDR2 having the amino acid sequence of SEQ ID NO: 241 LC-CDR3 having the amino acid sequence of SEQ ID NO: 251; or (P1E8) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 198 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 216; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 230 LC-CDR2 having the amino acid sequence of SEQ ID NO: 242 LC-CDR3 having the amino acid sequence of SEQ ID NO: 252; or (P2B2) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 207 HC-CDR3 having the amino acid sequence of SEQ ID NO: 217; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 253; or (P2B7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 218; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 231 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 254; or (P2D11) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 199 HC-CDR2 having the amino acid sequence of SEQ ID NO: 208 HC-CDR3 having the amino acid sequence of SEQ ID NO: 219; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 232 LC-CDR2 having the amino acid sequence of SEQ ID NO: 243 LC-CDR3 having the amino acid sequence of SEQ ID NO: 255; or (P2F10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 200 HC-CDR2 having the amino acid sequence of SEQ ID NO: 209 HC-CDR3 having the amino acid sequence of SEQ ID NO: 220; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 233 LC-CDR2 having the amino acid sequence of SEQ ID NO: 244 LC-CDR3 having the amino acid sequence of SEQ ID NO: 256; or (P2H4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 221; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 234 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 257; or (P2D3) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 201 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 222; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1G4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 223; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 258; or (P1B12) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 224; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 235 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1C7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 225; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 245 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189.
2. The antigen-binding molecule according to claim 1, wherein the antigen-binding molecule comprises: (P1A10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 71; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 89; or (P1B6) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 72; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 90; or (P1C10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 73; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 91; or (P1D7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 74; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 92; or (P1E8) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 75; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 93; or (P2B2) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 76; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 94; or (P2B7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 77; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 95; or (P2D11) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 78; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 96; or (P2F10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 79; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 97; or (P2H4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 80; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 98; or (P2D3) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 81; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 99; or (P1G4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 82; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 100; or (P1B12) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 83; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 101; or (P1C7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 84; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 102.
3. The antigen-binding molecule according to claim 1, wherein the antigen binding molecule is capable of binding to CD122 and CD132.
4. The antigen-binding molecule according to claim 1, which is an IL-2 receptor agonist.
5. The antigen-binding molecule according to claim 1, which is capable of reducing expression of PD-1 by T cells.
6. A nucleic acid encoding an antigen-binding molecule, optionally isolated, which is capable of binding to common ? chain (CD132), wherein the antigen-binding molecule comprises: (P1A10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 196 HC-CDR2 having the amino acid sequence of SEQ ID NO: 204 HC-CDR3 having the amino acid sequence of SEQ ID NO: 212; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 227 LC-CDR2 having the amino acid sequence of SEQ ID NO: 238 LC-CDR3 having the amino acid sequence of SEQ ID NO: 248; or (P1B6) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 213; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 239 LC-CDR3 having the amino acid sequence of SEQ ID NO: 249; or (P1C10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 112 HC-CDR2 having the amino acid sequence of SEQ ID NO: 124 HC-CDR3 having the amino acid sequence of SEQ ID NO: 214; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 228 LC-CDR2 having the amino acid sequence of SEQ ID NO: 240 LC-CDR3 having the amino acid sequence of SEQ ID NO: 250; or (P1D7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 197 HC-CDR2 having the amino acid sequence of SEQ ID NO: 206 HC-CDR3 having the amino acid sequence of SEQ ID NO: 215; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 229 LC-CDR2 having the amino acid sequence of SEQ ID NO: 241 LC-CDR3 having the amino acid sequence of SEQ ID NO: 251; or (P1E8) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 198 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 216; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 230 LC-CDR2 having the amino acid sequence of SEQ ID NO: 242 LC-CDR3 having the amino acid sequence of SEQ ID NO: 252; or (P2B2) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 207 HC-CDR3 having the amino acid sequence of SEQ ID NO: 217; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 253; or (P2B7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 218; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 231 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 254; or (P2D11) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 199 HC-CDR2 having the amino acid sequence of SEQ ID NO: 208 HC-CDR3 having the amino acid sequence of SEQ ID NO: 219; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 232 LC-CDR2 having the amino acid sequence of SEQ ID NO: 243 LC-CDR3 having the amino acid sequence of SEQ ID NO: 255; or (P2F10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 200 HC-CDR2 having the amino acid sequence of SEQ ID NO: 209 HC-CDR3 having the amino acid sequence of SEQ ID NO: 220; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 233 LC-CDR2 having the amino acid sequence of SEQ ID NO: 244 LC-CDR3 having the amino acid sequence of SEQ ID NO: 256; or (P2H4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 221; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 234 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 257; or (P2D3) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 201 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 222; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1G4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 223; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 258; or (P1B12) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 224; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 235 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1C7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 225; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 245 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189.
7. The nucleic acid encoding an antigen-binding molecule according to claim 6, wherein the antigen-binding molecule comprises: (P1A10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 71; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 89; or (P1B6) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 72; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 90; or (P1C10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 73; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 91; or (P1D7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 74; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 92; or (P1E8) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 75; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 93; or (P2B2) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 76; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 94; or (P2B7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 77; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 95; or (P2D11) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 78; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 96; or (P2F10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 79; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 97; or (P2H4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 80; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 98; or (P2D3) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 81; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 99; or (P1G4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 82; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 100; or (P1B12) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 83; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 101; or (P1C7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 84; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 102.
8. The nucleic acid encoding an antigen-binding molecule according to claim 6, wherein the antigen binding molecule is capable of binding to CD122 and CD132.
9. The nucleic acid encoding an antigen-binding molecule according to claim 6, which is an IL-2 receptor agonist.
10. The nucleic acid encoding an antigen-binding molecule according to claim 6, which is capable of reducing expression of PD-1 by T cells.
11. A method of treating or preventing a T cell dysfunctional disorder, a cancer, or an infectious disease, comprising administering to a subject a therapeutically or prophylactically effective amount of an antigen-binding molecule, wherein the antigen-binding molecule comprises: (P1A10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 196 HC-CDR2 having the amino acid sequence of SEQ ID NO: 204 HC-CDR3 having the amino acid sequence of SEQ ID NO: 212; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 227 LC-CDR2 having the amino acid sequence of SEQ ID NO: 238 LC-CDR3 having the amino acid sequence of SEQ ID NO: 248; or (P1B6) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 213; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 239 LC-CDR3 having the amino acid sequence of SEQ ID NO: 249; or (P1C10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 112 HC-CDR2 having the amino acid sequence of SEQ ID NO: 124 HC-CDR3 having the amino acid sequence of SEQ ID NO: 214; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 228 LC-CDR2 having the amino acid sequence of SEQ ID NO: 240 LC-CDR3 having the amino acid sequence of SEQ ID NO: 250; or (P1D7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 197 HC-CDR2 having the amino acid sequence of SEQ ID NO: 206 HC-CDR3 having the amino acid sequence of SEQ ID NO: 215; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 229 LC-CDR2 having the amino acid sequence of SEQ ID NO: 241 LC-CDR3 having the amino acid sequence of SEQ ID NO: 251; or (P1E8) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 198 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 216; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 230 LC-CDR2 having the amino acid sequence of SEQ ID NO: 242 LC-CDR3 having the amino acid sequence of SEQ ID NO: 252; or (P2B2) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 207 HC-CDR3 having the amino acid sequence of SEQ ID NO: 217; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 253; or (P2B7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 218; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 231 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 254; or (P2D11) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 199 HC-CDR2 having the amino acid sequence of SEQ ID NO: 208 HC-CDR3 having the amino acid sequence of SEQ ID NO: 219; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 232 LC-CDR2 having the amino acid sequence of SEQ ID NO: 243 LC-CDR3 having the amino acid sequence of SEQ ID NO: 255; or (P2F10) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 200 HC-CDR2 having the amino acid sequence of SEQ ID NO: 209 HC-CDR3 having the amino acid sequence of SEQ ID NO: 220; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 233 LC-CDR2 having the amino acid sequence of SEQ ID NO: 244 LC-CDR3 having the amino acid sequence of SEQ ID NO: 256; or (P2H4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 108 HC-CDR2 having the amino acid sequence of SEQ ID NO: 120 HC-CDR3 having the amino acid sequence of SEQ ID NO: 221; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 234 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 257; or (P2D3) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 201 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 222; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1G4) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 223; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 258; or (P1B12) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 224; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 235 LC-CDR2 having the amino acid sequence of SEQ ID NO: 174 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189; or (P1C7) a VH region incorporating the following CDRs: HC-CDR1 having the amino acid sequence of SEQ ID NO: 106 HC-CDR2 having the amino acid sequence of SEQ ID NO: 119 HC-CDR3 having the amino acid sequence of SEQ ID NO: 225; and a VL region incorporating the following CDRs: LC-CDR1 having the amino acid sequence of SEQ ID NO: 151 LC-CDR2 having the amino acid sequence of SEQ ID NO: 245 LC-CDR3 having the amino acid sequence of SEQ ID NO: 189.
12. The method according to claim 11, wherein the antigen-binding molecule comprises: (P1A10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 71; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 89; or (P1B6) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 72; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 90; or (P1C10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 73; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 91; or (P1D7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 74; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 92; or (P1E8) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 75; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 93; or (P2B2) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 76; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 94; or (P2B7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 77; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 95; or (P2D11) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 78; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 96; or (P2F10) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 79; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 97; or (P2H4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 80; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 98; or (P2D3) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 81; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 99; or (P1G4) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 82; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 100; or (P1B12) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 83; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 101; or (P1C7) a VH region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 84; and a VL region comprising an amino acid sequence having at least 85% sequence identity to SEQ ID NO: 102.
13. The method according to claim 11, wherein the antigen binding molecule is capable of binding to CD122 and CD132.
14. The method according to claim 11, wherein the cancer is selected from the group consisting of: colon cancer, colon carcinoma, colorectal cancer, nasopharyngeal carcinoma, cervical carcinoma, oropharyngeal carcinoma, gastric carcinoma, hepatocellular carcinoma, head and neck cancer, head and neck squamous cell carcinoma (HNSCC), oral cancer, laryngeal cancer, prostate cancer, lung cancer, small cell lung cancer, non-small cell lung cancer, bladder cancer, urothelial carcinoma, melanoma, advanced melanoma, renal cell carcinoma, ovarian cancer or mesothelioma.
15. The method according to claim 11, wherein the antigen binding molecule is administered in combination with a therapeutically effective amount of an agent capable of inhibiting signalling mediated by an immune checkpoint protein.
16. The method according to claim 15, wherein the immune checkpoint protein is PD-1, CTLA-4, LAG-3, TIM-3, VISTA, TIGIT or BTLA.
17. The method according to claim 11, wherein the infectious disease causes an inability to mount an effective immune response against an infection, and wherein the infection is a chronic and/or latent infection.
18. The method according to claim 11, wherein the infectious disease is caused by a bacterial, fungal, parasitic, or viral infection.
19. The method according to claim 11, wherein the infectious disease caused by a bacterial infection is selected from: Bacillus spp., Bordetella pertussis, Clostridium spp., Corynebacterium spp., Vibrio chloerae, Staphylococcus spp., Streptococcus spp. Escherichia, Klebsiella, Proteus, Yersinia, Erwina, Salmonella, Listeria sp, Helicobacter pylori, mycobacteria (e.g. Mycobacterium tuberculosis) and Pseudomonas aeruginosa; wherein the infectious disease caused by a fungal infection is selected from: Alternaria sp, Aspergillus sp, Candida sp and Histoplasma sp; wherein the infectious disease caused by a parasitic infection is selected from: diseases caused by Plasmodium species (e.g. Plasmodium falciparum, Plasmodium yoeli, Plasmodium ovale, Plasmodium vivax, or Plasmodium chabaudi chabaudi), malaria, leishmaniasis, and toxoplasmosis; or wherein the infectious disease caused by a viral infection is selected from by influenza virus, measles virus, hepatitis B virus (HBV), hepatitis C virus (HCV), human immunodeficiency virus (HIV), lymphocytic choriomeningitis virus (LCMV), Herpes simplex virus and human papilloma virus (HPV).
20. The method according to claim 11, wherein the T cell dysfunctional disorder comprises T cell exhaustion or T cell anergy.
Description
BRIEF DESCRIPTION OF THE FIGURES
[1728] Embodiments and experiments illustrating the principles of the invention will now be discussed with reference to the accompanying figures.
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[1736] Absolute numbers of CD4+ T cells. (7B) Absolute numbers of CD8+ T cells. (7C) Absolute numbers of Tregs. (7D) Graphs showing CD4+CD25+FoxP3+ regulatory T cell compartment following stimulation with the indicated agents. (7E) Absolute numbers of naive CD8+ T cells. (7F) Absolute numbers of naive CD4+ T cells. (7G) Absolute numbers of central memory CD8+ T cells. (7H) Absolute numbers of central memory CD4+ T cells. (7I) Absolute numbers of effector memory CD8+ T cells. (7J) Absolute numbers of effector memory CD4+ T cells. (7K) Graphs showing dividing effector memory CD8+ T cells as determined by CellTrace Violet staining. (7L) Percentage of CD8+ effector memory cells which are dividing.
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EXAMPLES
[1760] In the following Examples, the inventors design, produce and characterise antibodies capable of binding to IL-2R? and ?c.
Example 1: IL-2R? and ?c Binding Antibodies
[1761] Anti-IL-2R? antibody clones and anti-?c antibody clones were isolated from a human antibody phage display library via in vitro selection.
[1762] Illustrative bispecific antibodies were constructed using IL-2R?-binding clone P2C4 in combination with one of the ?c-binding antibody clones P1A3 or P1A10. The bispecific antibodies were designated P2C4/P1A3 and P2C4/P1A10, respectively.
[1763] The closest matching antibody germline genes for clone P2C4 are IGHV1-46*01 and IGLV2-14*01.
[1764] The closest matching antibody germline genes for clone P1A3 are IGHV4-34*01 and IGKV2-28*01.
[1765] The closest matching antibody germline genes for clone P1A10 are IGHV1-24*01 and IGKV2-28*01.
[1766] Three bispecific antibody formats were prepared: scFv-KIH-Fc, CrossMab and Duobody formats. The bispecific antibodies were expressed by transient transfection of HEK 293 cells, and yields were as follows: [1767] ScFv-KiH-Fc: [1768] P2C4/P1A3: 4-14 mg/L; P2C4/P1A10: 28-40 mg/L [1769] CrossMab: [1770] P2C4/P1A3: 14-160 mg/L; P2C4/PIA 10: 63 mg/L [1771] Duobody: [1772] P2C4/P1A10: (P2C4) 77 mg/L; (P1A10) 110 mg/L
[1773] Except where otherwise indicated, in the following examples P2C4/P1A3 and P2C4/P1A10 were investigated in the scFv-KiH-Fc format, in which scFv comprising VH and VL domains for P2C4 are fused via a linker to Fc comprising the knob modification is expressed with scFv comprising VH and VL domains for P1A3 (P2C4/P1A3) or P1A10 (P2C4/P1A10) fused via a linker to Fc comprising the hole modification.
Example 2: Analysis of Binding to IL-2 Receptors
[1774] 2.1 Analysis of Binding Affinity by ELISA
[1775] Binding of P2C4/P1A3 to IL-2R? or ?c was measured by ELISA analysis, using recombinant IL-2R?-Fc and ?c-Fc coated on maxisorp plates.
[1776] Biotinylated P2C4/P1A3 was added at various concentrations. Detection of binding was performed using a colorimetric assay using HRP-conjugated streptavidin which converts TMB substrate to a blue solution. The reaction was stopped using hydrochloric acid, and absorbance was measured at 450 nm and 670 nm.
[1777] The results are shown in
[1778] The bispecific antibodies analysed in this assay were: [1779] scFv (P2CA) scFv (P1A3)KiH-Fcdesignated P2C4/P1A3 in the Figures. [1780] scFv (P2C4_FW2); scFv (P1A3_FW2)KIH-Fcdesignated P2C4_FW2/P1A3_ FW2 in the Figures. [1781] Fab (P2C4): Fab (P1A3) in CrossMab formatdesignated P2C4/P1A3 Crossmab in the Figures.
[1782] 2.2 Analysis of Binding Affinity by Bio-Layer Interferometry
[1783] The affinity of binding of P2C4/P1A3 and P2C4/P1A10 to IL-2R? and ?c was measured by Bio-Layer Interferometry (BLI).
[1784] P2C4/P1A3 or P2C4/P1A10 were captured on anti-human Fc biosensor tips, and 5 different concentrations of monomeric IL-2R? or ?c were allowed to bind to the captured antibodies. Dissociation of the antigen from the immobilised antibodies was performed for 5 min Binding affinity was calculated by fitting binding curves using the 1:1 Langmuir model.
[1785] The affinity data are summarised in the table below.
TABLE-US-00003 IL -2R? ?c P2C4/P1A3 k.sub.on = 2.21 ? 10.sup.5 M.sup.1s.sup.1 k.sub.off = 6.62 ? 10.sup.3 s.sup.1 k.sub.on = 6.22 ? 10.sup.4 M.sup.1s.sup.1 k.sub.off = 4.42 ? 10.sup.3 s.sup.1 Ko = 3.00 ? 10.sup.8 M Ko = 8.47 ? 10.sup.8 M P2C4/P1A10 k.sub.on = 1.66 ? 10.sup.5 M.sup.1s.sup.1 k.sub.off = 4.40 ? 10.sup.3 s.sup.1 k.sub.off = 1.56 ? 10.sup.5 M.sup.1s.sup.1 k.sub.off = 9.61 ? 10.sup.3 s.sup.1 Ko = 2.82 ? 10.sup.8 M Ko = 6.18 ? 10.sup.8 M
[1786] Similar binding to IL-2R? for P2C4/P1A3 and P2C4/P1A10 was observed (30 nM vs 28.2 nM). This was to be expected because the bispecific antibodies have the same IL-2R?-binding clone P2C4.
[1787] Whilst the affinity of binding to ?c was similar for P2C4/P1A3 and P2C4/P1A10 (84.7 nM vs 61.8 nM). P2C4/P1A10 was found to have a faster on-rate and a faster off-rate than P2C4/P1A3.
[1788] 2.3 Analysis of Binding to IL-2RD and Yc Expressed at the Cell Surface
[1789] To determine whether P2C4/P1A3 and P2C4/P1A10 are able to bind to IL-2 receptors expressed on the surface of cells, HEK293-6E cells were transfected with plasmids encoding human IL-2R?-GFP, or IL-2R?-OFP and ?c-GFP.
[1790] Transfected cells were stained with P2C4/P1A3, P2C4/P1A10 or an isotype control antibody, followed by detection with a fluorochrome-conjugated secondary antibody for analysis by flow cytometry.
[1791] Normalized Median Fluorescence Intensity (nMFI) was calculated in the GFP+ cell population (for calls transfected with constructs encoding IL-2R?-GFP) or the GFP+/OFP+ cell population (for cells transfected with constructs encoding IL-2R?-OFP and ?c-GFP) by subtracting the MFI obtained when secondary antibody only was added to the cells (negative control condition).
[1792] The results of the analysis are shown in
[1793] 2.4 Analysis of Binding to Human T Cell Subsets
[1794] To identify the subsets of human T cells that P2C4/P1A3 and P2C4/P1A10 bind to, human peripheral blood mononuclear cells (PBMCs) were isolated and stained with P2C4/P1A3, P2C4/P1A10 or isotype control antibody, followed by detection with a fluorochrome-conjugated secondary antibody. Cells were then stained with antibodies for the T cell markers CD3, CD4, CD8, CD45RA, CCR7, Foxp3 and CD25 to enable the delineation of the following T cell subsets: Naive (CD45RA+CCR?+). T central memory (CD45RA-CCR7+), T effector memory (CD45RA-CDR7?), T effector memory re-expressing CD45RA (TEMRA: CD45RA+CCR7?) and Treg (CD4+CD25+Foxp3+).
[1795] Samples were analysed by flow cytometry. Normalized Median Fluorescence Intensity (nMFI) was calculated by subtracting the MFI of the secondary antibody control.
[1796] The results are shown in
[1797] 2.5 Analysis of Binding to Rhesus IL-2R? and ?c Expressed at the Cell Surface
[1798] Cross-reactivity of P2C4/P1A3 and P2C4/P1A10 for rhesus IL-2R? and ?c was analysed essentially as described in Example 2.3 above, using HEK293-6E cells transfected with plasmids encoding rhesus IL-2R?-OFP and ?c-GFP.
[1799] The results of the analysis are shown in
[1800] 2.6 Analysis of Binding to Cynomolgus Macaque T Cells
[1801] Cynomolgus macaque PBMCs were isolated and stained with P2C4/P1A3, P2C4/P1A10 or isotype control antibody, followed by a fluorochrome-conjugated secondary antibody. Cells were then stained with T call markers CD3, CD28 and CD95 to delineate the following T cell subsets: Naive (CD28+CD95?). Effector (CD28-CD95+) and Memory (CD28+CD95+).
[1802] Samples were analysed by flow cytometry. Normalized Median Fluorescence Intensity (nMFI) was calculated by subtracting the MFI of the secondary antibody control.
[1803] The results are shown in
Example 3: Analysis of Induction of Cell Proliferation by IL-2R6- and ?c-Binding Bispecific Antibodies
[1804] 3.1 Analysis of the Effect on NK Cells
[1805] To analyse the functional activity of the IL-2R?- and ?c-binding bispecific antibodies, a stimulation assay was performed using the NK92 cell line which expresses both IL-2R? and ?c.
[1806] Anti-IL-2R? antibody clones and anti-?c antibody clones identified from human antibody phage display library were paired to form various bispecific antibody combinations, based on a single chain variable fragment (scFv) linked to a IgG1 knob or hole Fc. These antibodies were then used in a NK92 cell stimulation assay.
[1807] Briefly, cells were washed and stimulated with antibodies or cytokines for 3 days. Trastuzumab was used as a negative control. To quantify cell proliferation, alamarBlue reagent was added and fluorescence signal was measured at fluorescence excitation wavelength 544 nm and fluorescence emission wavelength 590 nm.
[1808] The results are shown in
[1809] In a separate assay, the following bispecific antibodies were analysed. [1810] scFv (P2C4): scFv (P1A3)KiH-Fcdesignated P2C4/P1A3 in the Figure. [1811] scFv (P2C4) scFv (P1A10)KIH-Fcdesignated P2C4/P1A10 in the Figure. [1812] Fab (P2C4): Fab (P1A3) in CrossMab formatdesignated P2C4/P1A3 Crossmab in the Figure. [1813] Fab (P2C4): Fab (P1A10) in CrossMab formatdesignated P2C4/P1A10 Crossmab in the Figure. [1814] Fab (P2C4): Fab (P1A10) in Duobody formatdesignated P2C4/P1A10 Duobody in the Figure.
[1815] The results are shown in
[1816] 3.2 Analysis of the Effect on Primary Human T Cells
[1817] To analyse the effects of P2C4/P1A3 and P2C4/P1A10 on primary human T cells, T cells were isolated from human PBMCs and pre-activated for three days with anti-CD3-coated plates (2 ?g/ml) plus soluble anti-CD28 (1 ?g/ml). Cells were then rested in fresh media for a day before being labelled with CellTrace Violet, Cells were seeded at 100,000 per well and treated with P2C4/P1A3, P2C4/P1A10 (200 nM, 40 nM, 8 nM and 1.6 nM), IL-2 (20 nM, 4 nM, 0.8 nM, 0.16 nM) or anti-CD3/CD28 beads. Isotype antibody and untreated cells were included as negative controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD45RO, CCR7, Foxp3 and CD25 to delineate T cell subsets: [1818] CD4+na?ve T cells: CD3+CD4+FoxP3?CCR7+CD45RO? [1819] CD8+na?ve T cells: CD3+CD8+CCR7+CD45RO? [1820] CD4+ central memory T cells: CD3+CD4+FoxP3?CCR7+CD45RO+ [1821] CD8+ central memory T cells: CD3+CD8+CCR7+CD45RO+ [1822] CD4+ effector memory T cells: CD3+CD4+FoxP3?CCR7?CD45RO+ [1823] CD8+ effector memory T cells: CD3+CD8+CCR7?CD45RO+ [1824] CD4+ Tregs: CD3+CD4+CD25+FoxP3+
[1825] Counting beads were included to allow absolute cell numbers to be determined by flow cytometry.
[1826] The results are shown in
[1827] With respect to the individual T cell subsets, CD8+ T effector memory subset responded the most to stimulation with P2C4/P1A3 and P2C4/P1A10 (
[1828] In a separate experiment, pre-activated T cells were stimulated with 8 different concentrations of P2C4/P1A3, P2C4/P1A10, isotype control antibody. IL-2 or IL-15. The ratio of CD8 to Treg cells was determined by dividing the absolute number of COB T cells with the absolute number of Tregs.
[1829] The results are shown in
[1830] Pre-expanded human Treg cells were stimulated with P2C4/P1A3, P2C4/P1A10, isotype control antibody IL-2 or IL-15. After four days, cells were stained with CD3, CD4, CD8, Foxp3 and CD25 and assessed by flow cytometry to determine absolute counts using counting beads. Treg cells were defined as CD3+CD4+CD25+Foxp3+ cells.
[1831] The results are shown in
[1832] 3.3 Analysis of the Effect on Primary Human PBMCs
[1833] To determine whether the same stimulatory effect for P2C4/P1A3 and Gigkaine could be observed in stimulated human PBMCs. PBMCs were isolated and pre-activated with anti-CD3/CD28 beads for three days. Cells were then rested in fresh media for a day before labelling with CellTrace Violet. Cells were seeded at 400 000 per well and treated with P2C4/P1A3, P2C4/P1A10 (200 nM, 4D nM, 8 nM and 1.6 nM), IL-2 (20 nM, 4 nM, 0.8 nM, 0.16 nM) or anti-CD3/CD28 beads. Isotype antibody and untreated control conditions were included as negative controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD45RO, CCR7, Foxp3 and CD25 to delineate T cell subsets (see Example 3.2). Counting beads were included to allow absolute cell numbers to be determined by flow cytometry.
[1834] The results are shown in
[1835] 3.4 Analysis of the Effect on Antigen-Specific T Cells
[1836] To determine the effects of P2C4/P1A3 and P2C4/P1A10 stimulation on antigen-specific T cells (e.g. virus-specific T cells), EBV-specific T cells (EBVSTs) were thawed and rested for a day in fresh media, and subsequently treated with P2C4/P1A3, P2C4/P1A10, IL-2 or anti-CD3/CD28 beads. Isotype antibody and untreated control conditions were included as negative controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD45RA, CDR7, Foxp3 and CD25 to delineate T call subsets, and CD56 to enable detection of NK cells.
[1837] Counting beads were included to allow absolute cell numbers to be determined by flow cytometry.
[1838] The results are shown in
[1839] 3.5 Analysis of the Effect on Cynomolgus PBMCs
[1840] Frozen cynomolgus PBMCs were thawed and rested overnight in complete media before labelling with Cell Trace Violet and seeded at 200 000 cells per well. Cells were then treated with P2C4/P1A3, P2C4/P1A10, isotype antibody (200 nM, 40 nM, 8 nM, 1.6 nM) or human recombinant IL-2 (20 nM, 4 nM, 0.8 nM, 0.16 nM). Media and anti-CD3/CD28 beads were included as controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD2B, CD95. Foxp3 and CD25 to delineate cynomolgus T cell subsets: [1841] CD4+ Na?ve T cells: CD3+CD4+CD28+CD95? [1842] CD4+ effector memory T cells: CD3+CD4+CD28-CD95+ [1843] CD4+ central memory T cells: CD3+CD4+CD28+CD95+ [1844] CD8+ Na?ve T cells: CD3+CD8+CD28+CD95? [1845] CD8+ effector memory T cells: CD3+CD8+CD28-CD95+ [1846] CD8+ central memory T cells: CD3+CD8+CD28+CD95+
[1847] Cells were also stained with CD16 and CD2D to respectively identify NK and B cells. Counting beads were included to allow absolute cell numbers to be determined by flow cytometry.
[1848] The results are shown in
[1849]
[1850] 3.6 Analysis of the Effect on Pre-Activated Cynomolgus PBMCs
[1851] Frozen cynomolgus PBMCs were thawed end rested overnight in complete media before pre-activation for three days with CD3/CD2/CD28 non-human primate T cell activating beads at a beads:cells ratio of 1:2. Cells were then rested in fresh media for a day before labelling with Cell Trace Violet. Cells were seeded at 180 000 per well and treated with P204/P1A3, P2C4/P1A10, isotype antibody (200 nM, 40 nM, 8 nM, 1.6 (M) or human recombinant IL-2 (20 nM, 4 nM, 0.8 nM, 0.15 nM). Media and anti-CD3/CD28 beads were included as controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD28, CD95, Foxp3 and CD25 to delineate T cell subsets, as above.
[1852] Counting beads were included to allow absolute cell numbers to be determined by flow cytometry.
[1853] The results are shown in
[1854]
[1855]
[1856] 3.7 Analysis of the Effect on Pre-Activated Human NK Cells
[1857] To determine the effects of IL-2R?- and ?c-binding bispecific antibodies on human NK calls, primary NK cells were isolated from human PBMCs and pre-activated for three days with irradiated K562-4-1BBL-CD64-CD86 cell line. Cells were labelled with CellTrace? Violet for tracking of cell proliferation, then treated with P2C4/P1A3, P2C4/P1A10, IL-2 and IL-15. Isotype antibody and no treatment wells were included as negative controls. After five days, cells were stained for CD56 and CD16 NK cell markers. Counting beads were also added to determine the absolute cell numbers, and samples were analysed by now cytometry.
[1858] The results are shown in
[1859] 3.8 Analysis of the Effect on CAR-T Cells
[1860] To determine the effects of IL-2R?- and ?c-binding bispecific antibodies on CAR-T calls, primary T cells were isolated from human PBMCs and then transduced with the CAR construct so that the CAR is expressed. Alter 24 days of cell expansion, cells were labelled with CellTrace? M Violet for tracking of cell proliferation, then treated with P2CA/P1A3, P204/P1A10, isotype antibody or IL-2. After five days, cells were stained for CAR expression and T cell markers to identify the T cell subsets Counting beads were also added to determine the absolute cell numbers, and samples were analysed by flow cytometry.
[1861] The results are shown in
Example 4: Analysis of Induction of Intracellular Signalling by IL-2RB- and ?c-Binding Bispecific Antibodies
[1862] 4.1 Analysis of Induction of STAT5 Phosphorylation in NK Cells
[1863] NK92 cells were washed and rested in IL-2-free media for 1 h prior to stimulation with various concentrations of P2C4/P1A3, P2CA/P1A10, Isotype control antibody or IL-2 for 30 min. Cells were subsequently fixed, permeabilised and stained for phosphorylated STAT5 using a fluorescently-labelled antibody, and the samples were then analysed by flow cytometry.
[1864] The results are shown in
[1865] 4.2 Analysis of Induction of STAT5 Phosphorylation in Primary Human Immune Cell Subsets
[1866] PBMCs were thawed and rested overnight prior to being seeded at 400.000 cells per well in serum-free media. Cells were rested for two hours and subsequently stimulated with 8 different concentrations of P2C4/P1A3, P2C4/P1A10, isotype control antibody or IL-2. After 30 minutes, cells were analysed by flow cytometry for phosphorylation of STAT5 as well as for immune cell markers CD3, CD4, CD8, CD45RA, CD45RO, Foxp3, CD25, CD56, CD19 and CD14 to delineate T subsets, B, NK cells and monocytes.
[1867] The results are shown in
[1868] 4.3 Analysis of Induction of STAT5 Phosphorylation in Pre-Activated Primary Human Immune Cell Subsets
[1869] PBMCs were thawed and rested overnight before pre-activation with anti-CD3/CD28 beads for three days. Cells were then rested in fresh media for a day before seeding at 200 000 par well in serum-free media. Cells were rested for two hours and subsequently stimulated with 8 different concentrations of P2C4/P1A3, P2C4/P1A10, isotype control antibody or IL-2. After 30 minutes, cells were analysed by flow cytometry for phosphorylation of STAT5 as well as for immune cell markers CD3, CD4, CD8, and CD56 to delineate T subsets and NK cells.
[1870] The results are shown in
[1871] 4.4 Analysis of the Kinetics of Induction of STAT5 Phosphorylation in NK Cells
[1872] NK92 calls were rested in serum-free media and treated with P2C4/P1A3, P2C4/P1A10. Isotype control antibody at 100 nM or IL-2 at 20 nM for 5, 10, 20, 30, 60 and 120 min. Cells were harvested at the indicated time points for assessment of STAT5 phosphorylation (Y694) via western blotting. Total STAT5 and actin were included as controls.
[1873] P2C4/P1A3 and P2C4/P1A10 were able to induce pSTAT5 in a time-dependent manner in comparison to Isotype antibody treatment (
[1874] 4.5 Analysis of the Kinetics of Induction of STAT5 Phosphorylation in Primary Human Immune Cell Subsets
[1875] Freshly isolated human PBMCs were stimulated with 50 nM P2C4/P1A3, P2C4/P1A10, Isotype control antibody or 2 nM IL-2 in a reverse lime course of 0, 5, 10, 20, 40, 60 and 120 min. Cells were then fixed, permeabilised and stained with CD3, CD4, CD8, CD14, CD19 and pSTAT5 (Y694) for the identification of immune cell subsets. The data are presented as mean percentage of pSTAT5-positive cells of the PBMC subsets from 3 donors.
[1876] The results are shown in
[1877] 4.6 Analysis of the Kinetics of Induction of STAT5 Phosphorylation in Antigen-Specific T Cells
[1878] EBV-specific T cells were thawed and rested in fresh media, and subsequently stimulated with 50 nM P2C4/P1A3, P2C4/P1A10, isotype control antibody or 2 nM IL-2 in a reverse time course of 0, 5, 10, 20, 40, 60 and 120 min. Cells were then fixed, permeabilised and stained with CD3, CD4, CD8 and pSTAT5 (Y694) for the identification of EBV-specific T cell subsets. The data are presented as mean percentage of pSTAT5-positive cells of the virus-specific T cell subsets from 3 donors.
[1879] The results are shown in
[1880] 4.7 Effects on Other Cytokine Receptors
[1881] To assess whether P2C4/P1A3 or P2C4/P1A10 binding of IL-2Ry prevents IL-4 signalling through the IL-4 receptor, THP-1 cells were treated with P2C4/P1A3, P2C4/P1A10. Isotype Control antibody (100 nM) or IL-2 (20 nM), with or without IL-4 (200 ng/ml) for 30 minutes. Cell lysates were assessed by western blotting to determine phosphorylation of STATE (Y641). Total STAT6 and actin were included as controls.
[1882] IL-4 induced pSTAT6 to a similar extent between different conditions, even in the presence of P2C4/P1A3/P2C4/P1A10 (
Example 5: Analysis of ToxicityInduction of Proliferation of Non-Activated Immune Cells
[1883] 5.1 Analysis of Stimulation of Proliferation by Non-Activated PBMCs
[1884] To measure the effects of P2C4/P1A3 and P2C4/P1A10 on non-activated, freshly-obtained PBMCs. PBMCs were isolated and directly treated with P2C4/P1A3, P2C4/P1A10 (200 nM, 40 nM, 8 nM and 1.6 nM), IL-2 (20 nM, 4 nM, 0.8 nM and 0.16 nM) or anti-CD3/CD28 beads as positive control. Isotype antibody and untreated control conditions were included as negative controls. After four days, cells were stained with T cell markers CD3, CD4, CD8, CD45RO, CCR7, Foxp3 and CD25 to for the delineation of T cell subsets, and with CD19 and CD56 for the identification of 8 cells and NK cells, respectively. Counting beads were included to enable absolute cell numbers to be determined by flow cytometry.
[1885] The results of the analysis are shown in
[1886] T cell activation requires three signals (1) TCR-(CD3)/MHC interaction, (2) co-stimulation i.e. CD28 and (3) cytokine signalling i.e. IL-2, As P2C4/P1A3 and P2C4/P1A10 do not induce proliferation of T cells under direct stimulation, this indicated that signals (1) and (2) are required before T cells become responsive to the antibodies, in agreement with the results obtained with preactivated calls.
[1887] These data suggest that P2C4/P1A3 and P2C4/P1A10 preferentially expand activated T cells, and may be associated with reduced toxicity as compared to treatment with IL-2 (which expands both activated and non-activated cells).
[1888] 5.2 Analysis of Stimulation of Proliferation by Non-Activated T Cells
[1889] Human T cells were isolated and directly treated with P2C4/P1A3, P2C4/P1A10. IL-2 or anti-CD3/CD28 beads. Isotype antibody and untreated control conditions were included as negative controls. After four days, cells were stained with T cell markers CD3, CD4, CD5, CD45RA, CCR7, Foxp3 and CD25 to delineate T cell subsets. Counting beads were included to enable absolute cell numbers to be determined by flow cytometry.
[1890] The results are shown in
Example 6: Analysis of Pharmacokinetics in non-Human Primates
[1891] A simple pharmacokinetics (PK) study was performed to measure the clearance of P2C4/P1A3 in non-human primates.
[1892] 3 cynomolgus macaques were injected with a single dose of 1 mg/kg, 5 mg/kg and 10 mg/kg P2C4/P1A3 and blood collection was done at pre-dose, 1 h, 24 h, 72 h and 120 h post-antibody injection time-points. Plasma is obtained from the collected blood and a sandwich ELISA were performed to measure the levels of P2C4/P1A3.
[1893] Sandwich ELISA was performed using coated anti-human CH2 antibody, and detection of P2C4/P1A3 was by using anti-human Fc-HRP. An ELISA standard curve was derived using purified P2C4/P1A3 for calculation of the absolute concentration of antibody in blood.
[1894] The results are shown in
[1895] IL-2 is known to have a much shorter serum half-lifesee e.g. Skrombolas and Frelinger, Expert Rev Clin Immunol. (2014)10(2): 207-217, which reports that a study of the serum half-life of IL-2 introduced intravenously found a bi-phasic event with phase I (biodistribution throughout the body) resulting in t.sub.1/2 of approximately 7 min and phase II (extravasation from plasma into tissue) at approximately 60 min.
Example 7: Analysis of IL-2RS and Yc Expression on Human PBMCs and Antigen-Specific T Cells
[1896] Human PBMCs were thawed and rested overnight in cell culture media. The cells were then activated using anti-CD3/CD28 beads.
[1897] After three days, cells were rested in media for a day before staining with commercially available anti-IL-2R? or ?c antibodies plus antibodies for markers of human immune subsets. Cells were then analysed by flow cytometry to determine the expression of IL-2R? and ?c before (?) and after (+) pre-activation. Normalized Median Fluorescence Intensity (nMFI) was calculated by subtracting MFI values for the fluorescence-minus one (FMO) control.
[1898] The results are shown in
[1899] In a separate experiment, EBV-specific immune cells were thawed and rested in fresh media overnight prior to being stained with commercially available anti-IL-2R? or ?c antibodies plus antibodies for markers of human T cell subsets and NK cells. Cells were then analysed by flow cytometry to determine the expression of IL-2R? and ?c. Normalized Median Fluorescence Intensity (nMFI) was calculated by subtracting MFI values for the fluorescence-minus one (FMO) control.
[1900] The results are shown in
Example B: Production of Anti-IL-2R?/?c Antibody P2C4IP1A10 in Duobody Format
[1901] P2C4/P1A10 was made in the Duobody format. Briefly, monospecific anti-IL-2R? P2C4 IgG1-K409R and anti-?c P1A10 IgG1-F405L antibodies were produced and purified, mixed, then subjected to reduction with 75 mM 2-MEA at pH 8.5, 31? C. for 5 h, 2-MEA was removed by dialysis, and the antibodies were left to re-oxidise at 4? C. The fully formed bispecific Duobody were purified by anion exchange chromatography.
Example 9: Analysis of the Effect of Anti-IL-2R?/?c Antibodies on Anti-Cancer Immune Responses
[1902] Example 8.4 of WO 2017/021540 A1 reports the ability of CD8+ T cells expanded by treatment with bispecific agonist anti-IL-2R? and -?c antibodies to kill cancer cells. Specifically, T cells expanded from PBMCs obtained from EBV seropositive donors by culture in presence of P2C4:P1A3 are shown to kill LCLs.
[1903] Example 12 and
[1904] In the present Example, bispecific agonist anti-IL-2R? and -?c antibodies are shown to promote an anti-cancer immune response in vivo.
[1905] Tumours are established by subcutaneous injection of mice with LOLs. Specifically. EBV-transformed lymphoblastoid B-cell line (LCLs) was mixed with Matrigel and injected subcutaneously to the right flank of NSG mice.
[1906] Mice were subsequently administered with autologous EBV-specific CTLs (VSTs), with or without P2C4/P1A3, P2C4/P1A10, isotype control antibody, or IL-2, at 19 days post-tumour inoculation, IL-2 treatments were given at 40 000 U/kg, intra-peritoneally (i.p.) consecutively for 5 days for a total of 5 doses. Antibody treatments were given at 5 mg/kg, i.p. every 14 days, for a total of 2 doses. The administration schedule is shown in
[1907] Mouse blood was collected at 8 days post-VST treatment and flow cytometric analysis showed elevated numbers of total human CD3, CD4 and CD8 T cells in mice treated with P2C4/P1A3 and P2CA/P1A10 as compared to mica treated with isotype control antibody or IL-2. The results are shown in
[1908] At the end of the experiment, mice were euthanised at 22 days post-VST treatment and blood, spleen, liver, tumour-draining lymph node and flank tumour were harvested for flow cytometric analysis.
[1909] The results are shown in
[1910] Total organ tumour load in mice was calculated from the total numbers of GD 19+ cells in spleen, liver, flank tumour and tumour-draining lymph node (
Example 10: Analysis of the Effect of anti-IL-2R?/?c Antibodies on Anti-Cancer Immune Responses in the Presence of Tregs
[1911] In the present Example, bispecific agonist anti-IL-2R? and -?c antibodies are shown to promote an anti-cancer immune response in vivo, without accompanying increases in immunosuppressive regulatory T cells (Tregs) in a mouse model of EBV-BLCL metastatic lymphoma.
[1912] Tumours are established by subcutaneous injection of mice with LCLs. Specifically. EBV-transformed B lymphoblastoid cell lines (LCLs) was mixed with Matrigel and injected subcutaneously to the right flank of NSG mice.
[1913] Mice were subsequently administered with autologous EBV-specific CTLs (VSTs) and Tregs, with or without P2C4/P1A3, P2C4/P1A10, isotype control antibody, or IL-2, at 20 days post-tumour inoculation.
[1914] IL-2 treatments were given at 40 000 U/kg, intra-peritoneally (i.p.) consecutively for 5 days for a total of 5 doses Antibody treatments were given at 5 mg/kg, i.p. every 14 days, for a total of 2 doses. The administration schedule is shown in
[1915] Analysis of peripheral blood collected from mice at 7, 14 and 21 days post-treatment showed that slightly higher numbers of circulating VSTs were detected in mics which received bispecific anti-IL-2R? and -?c antibodies compared to isotype (Iso) or IL-2, as shown in
[1916] At the end of the experiment, mice were euthanised at 22 days post-treatment and spleen, liver, tumour-draining lymph node and injection site were harvested for flow cytometric analysis. The results are shown in
[1917] The ratio of CD8 cells to Tregs has been shown to be predictive of a favourable outcome in multiple tumour types (de Leeuw R J et al. Clin Cancer Res 2012, 18:3022-9).
[1918] The numbers of CD3, CD4 and CD8 T cells from spleen, liver, tumour-draining lymph node and injection site were pooled to provide total numbers of cells. The results are shown in
[1919] The numbers of EBV-BLCLs present in the spleen, liver and lymph node(s) at the end of the experiment were also analysed. The results are shown in
[1920] Total organ tumour load in mice was calculated from the total numbers of CD19+ tumour cells found in spleen, liver, and tumour-draining lymph node. The results are shown in
[1921] Next, the cytolytic activity of the expanded CD8 T cells was assessed by identifying the total number of CD8 T cells from spleen, liver, tumour-draining lymph node and injection site secreting the effector molecules interferon-? (IFN-?), CD107a and perforin. The results are shown in
[1922] In conclusion, bispecific anti-IL-2R and -ye antibodies were shown to provide sustained expansion of COB T cells in vivo without accompanying increases in Tregs, leading to improved tumour control.
Example 11: Analysis of the Effect of Anti-IL-2R?/?c Antibodies on Survival
[1923] A murine model of metastatic lymphoma is generated by intravenous injection of EBV-BLCLs to investigate the effect of bispecific agonist anti-IL-2R and -ye antibodies versus IL-2 on survival. Mice treated with anti-IL-2R and -ye antibodies are found to have improved survival as compared to mice not treated with anti-IL-2R and -ye antibodies.