<i>Francisella </i>glycoconjugate vaccines
11890336 ยท 2024-02-06
Assignee
Inventors
Cpc classification
C12N15/74
CHEMISTRY; METALLURGY
A61K47/64
HUMAN NECESSITIES
Y02A50/30
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
A61K47/646
HUMAN NECESSITIES
C07K2319/40
CHEMISTRY; METALLURGY
A61K2039/57
HUMAN NECESSITIES
A61K2039/6037
HUMAN NECESSITIES
A61K2039/55572
HUMAN NECESSITIES
International classification
A61K39/00
HUMAN NECESSITIES
A61K47/64
HUMAN NECESSITIES
Abstract
The disclosure relates to a glycoconjugate vaccine conferring protection against Francisella tularensis infections and a method to manufacture a glycoconjugate antigen.
Claims
1. A vaccine or immunogenic composition, comprising: a carrier polypeptide comprising at least 95% identity over the full length of the amino acid sequence of SEQ ID NO: 3 and an O-antigen antigenic polysaccharide isolated from Francisella crosslinked to the carrier polypeptide, wherein the O-antigen antigenic polysaccharide comprises 4)--D-GalNAcAN-(1-4)--D-GalNAcAN-(1-3)--D-GlcNAc-(1-2)--D-Qui4NFm-(1-), and wherein GalNacAN is 2-acetomido-2-deoxy-O-D-galacturonamide, Qui4NFm is 4,6-dideoxy-4-formamido-D-glucose, and the reducing end group GlcNAc is N-acetyl glucosamine.
2. The vaccine or immunogenic composition according to claim 1, wherein the carrier polypeptide comprises at least 96% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
3. The vaccine or immunogenic composition according to claim 1, wherein the carrier polypeptide comprises at least 97% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
4. The vaccine or immunogenic composition according to claim 1, wherein said composition further includes an adjuvant.
5. The vaccine or immunogenic composition according to claim 4, wherein said adjuvant is an aluminium based adjuvant suitable for use in a human subject.
6. A method of preventing a Francisella infection, comprising: administering the vaccine or immunogenic composition of claim 1 to a subject, thereby preventing the Francisella infection in the subject.
7. An antigenic polypeptide, comprising: a carrier polypeptide comprising at least 95% identity over the full length amino acid sequence of SEQ ID NO: 3, and an O-antigen antigenic polysaccharide isolated from Francisella crosslinked to the carrier polypeptide; wherein the O-antigen comprises 4)--D-GalNAcAN-(1-4)--D-GalNAcAN-(1-3)--D-GlcNAc-(1-2)--D-Qui4NFm-(1-), and wherein GalNacAN is 2-acetomido-2-deoxy-O-D-galacturonamide, Qui4NFm is 4,6-dideoxy-4-formamido-D-glucose, and the reducing end group GlcNAc is N-acetyl glucosamine.
8. The antigenic polypeptide according to claim 7, wherein the carrier polypeptide comprises at least 96% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
9. A vaccine or immunogenic composition, comprising: a carrier polypeptide comprising the amino acid sequence of SEQ ID NO: 3, and an O-antigen antigenic polysaccharide isolated from Francisella and crosslinked to said carrier polypeptide, wherein the O-antigen is 4)--D-GalNAcAN-(1-4)--D-GalNAcAN-(1-3)--D-GlcNAc-(1-2)--D-Qui4NFm-(1-), wherein GalNacAN is 2-acetomido-2-deoxy-O-D-galacturonamide, Qui4NFm is 4,6-dideoxy-4-formamido-D-glucose, and the reducing end group GlcNAc is N-acetyl glucosamine.
10. The vaccine or immunogenic composition according to claim 9, wherein the composition further includes an adjuvant.
11. The vaccine or immunogenic composition according to claim 10, wherein the adjuvant is an aluminium based adjuvant suitable for use in a human subject.
12. A method of preventing a Francisella infection, comprising: administering the vaccine or immunogenic composition of claim 9 to a subject, thereby preventing the Francisella infection in the subject.
13. An antigenic polypeptide, comprising: a carrier polypeptide comprising the amino acid sequence of SEQ ID NO: 3, and an O-antigen antigenic polysaccharide isolated from Francisella and crosslinked to the carrier polypeptide, wherein the O-antigen is 4)--D-GalNAcAN-(1-4)--D-GalNAcAN-(1-3)--D-GlcNAc-(1-2)--D-Qui4NFm-(1-), wherein GalNacAN is 2-acetomido-2-deoxy-O-D-galacturonamide, Qui4NFm is 4,6-dideoxy-4-formamido-D-glucose, and the reducing end group GlcNAc is N-acetyl glucosamine.
14. The vaccine or immunogenic composition according to claim 1, wherein the carrier polypeptide comprises at least 98% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
15. The vaccine or immunogenic composition according to claim 1, wherein the carrier polypeptide comprises at least 99% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
16. The antigenic polypeptide according to claim 7, wherein the carrier polypeptide comprises at least 97% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
17. The antigenic polypeptide according to claim 7, wherein the carrier polypeptide comprises at least 98% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
18. The antigenic polypeptide according to claim 7, wherein the carrier polypeptide comprises at least 99% identity over the full length of the amino acid sequence of SEQ ID NO: 3.
Description
BRIEF SUMMARY OF THE DRAWINGS
(1) An embodiment of the invention will now be described by example only and with reference to the following figures:
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(22) BF=Brightfield
(23) SSC=Side Scatter
(24) Composite=CD45, CD3 and nucleus
(25) *=p<0.01 by two-way ANOVA and Dunnett's post tests
(26) Images are representative of populations gated and fluorescence markers are optimised for visual impact with IDEAS;
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(32) TABLE-US-00001 TABLE 1 Summary of Sequence Information SEQ ID NO Gene/protein 1 IgIC protein 2 DNAk protein 3 Exo A protein 4 Tul4 protein 5 FTT1713c protein 6 FTT1695 protein 7 FTT1696 protein 8 Francisella O antigen locus DNA 9 Campylobacter jejuni PgI B DNA 10 IgIC DNA 11 DNAk DNA 12 KnR 13 Tul4 DNA 14 FTT1713c DNA 15 FTT1695 DNA 16 FTT1696 DNA 17 Wec A 18 DXNXS 19 DXNXT 20 EXNXS 21 EXNXT 22 PgIB C. jejuni 23 PgIB1 C. sputorum 24 PgIB1 C. sputorum 25 PlgB2 C. sputorum 26 PlgB2 C. sputorum optimised 27 PgIB2 C. sputorum 28 KnF 29 ExoA DNA
(33) TABLE-US-00002 TABLE 2 Strains and plasmids used Strain/plasmid Description Source E. coli Top10 F-mcrA (mrr-hsdRMS- Invitrogen mcrBC) 80lacZM15 lacX74 nupG recA1 araD139 (ara-leu)7697 gaIE15 galK16 rpsL(Str.sup.R) endA1 .sup. E. coli DH5 F-80lacZM15 (lacZYA-argF) Invitrogen U169 deoRrecA1 endA1 hsdR17 (rk, mk+), gal-phoAsupE44-thi-1 gyrA96 relA1 E. coli XL-1 endA1 gyrA96(nalr)thi-1 Stratagene relA1 lac gln V44 F[::Tn10 proAB+ laclq (lacZ)M15] hsdR17 (r.sub.k.sup.m.sub.k.sup.+) E. coli CLM24 rph-I IN(rrnD-rrnE) 1, 5 waaL F. tularensis subs. tularensis strain Type A strain DSTL, Porton SchuS4 Down laboratories F. tularensis subs. holarctica strain Type B strain, isolated in Green, M., et al., HN63 Norway from an infected Efficacy of the live Hare attenuated Francisella turlarenis vaccine (LVS) in a murine model of disease. Vaccine, 2005. 23(20): p. 2680-6 pGEM-T Easy TA cloning vector, amp.sup.r Promega pGH Vector construct GT-ExoA Celtek Bioscience, was synthesized in prior to LLC subcloning into pGVXN150 pLAFR1 Low copy expression Vanbleu E, Marchal vector, tet.sup.r K, Vanderleyden J. Genetic and physical map of the pLAFR1 vector. DNA Seq. 2004 June; 15(3): 225-7. pGAB1 F. tularensis O antigen This study coding region inserted into MCS of pGEM-T easy pGAB2 F. tularensis subs. This study tularensis strain SchuS4 O antigen coding region inserted into Ecorl site of pLAFR. pGVXN114 Expression plasmid for GlycoVaxyn CjPgIB regulated from the Lac promoter in pEXT21. IPTG inducible, HA tag, Spec.sup.r. pGVXN115 Expression plasmid for C. GlycoVaxyn jejuninon functionalPgIB due to a mutation at .sub.457WWDYGY.sub.462 to .sub.457WAAYGY.sub.462, regulated from the Lac promoter in pEXT21. IPTG inducible, HA tag, Spec.sup.r. pGVXN150.sub.260DNQNS.sub.264 Expression plasmid for This study Pseudomonas aeruginosa PA103 (DSM111/) Exotoxin A with the signal peptide of the E. coliDsbA protein, two inserted bacterial N-glycosylation sites, AA at position 262 altered from N to Q and a hexahis tag at the C-terminus. Induction under control of an arabinose inducible promoter, Amp.sup.r pGVXN150.sub.402DQQRT.sub.406 Expression plasmid for This study Pseudomonas aeruginosa PA103 (DSM111/) Exotoxin A with the signal peptide of the E. coliDsbA protein, two inserted bacterial N- glycosylation sites, AA at position 404 altered from N to Q and a hexahis tag at the C-terminus. Induction under control of an arabinose inducible promoter, Amp.sup.r pGVXN150.sub.260DNQNS.sub.264/.sub.402DQQRT.sub.406 Expression plasmid for This study Pseudomonas aeruginosa PA103 (DSM111/) Exotoxin A with the signal peptide of the E. coliDsbA protein, two inserted bacterial N- glycosylation sites, AA at position 262 and 404 altered from N to Q and a hexahis tag at the C- terminus. Induction under control of an arabinose inducible promoter, Amp.sup.r pGVXN150:GTExoA Expression plasmid for P. This study aeruginosa PA103 Exotoxin A (ExoA) with the signal peptide of the E. coli DsbA protein, two inserted bacterial N-glycosylation sites, two extra terminal glycosylation sites on the N and C-termini, and a hexa- His tag at the C-terminus. Induction under control of an arabinose inducible promoter, Amp.sup.r pACYCpgl pACYC184 carrying the 5 CjPgIB locus, Cm.sup.r E. coli CedAPgIB E. coli strain CLM24 with a This study chromosomally inserted IPTG inducible copy of PgIB pGVXN150 Expression plasmid for P. GlycoVaxyn, aeruginosa PA103 ExoA Cuccui et al., 2013 with the signal peptide of the E. coli DsbA protein, two inserted bacterial N- glycosylation sites, and a hexa-His tag at the C- terminus. Induction under control of an arabinose inducible promoter, Amp.sup.r
(34) Materials and Methods
(35) Bacterial Strains
(36) Escherichia coli strains were grown in LB at 37 C., 180 rpm for small scale tests, or 110 rpm for large scale vaccine production. Antibiotics and or supplements were used at the following concentrations; tetracycline 20 g/ml, ampicillin 100 g/ml, spectinomycin 80 g/ml and chloramphenicol 30 g/ml. The host strain for initial cloning experiments was E. coli XL-1, subsequent strains used for glycoconjugate production were E. coli DH5 and CLM24 (Table 1). For efficacy studies, mice were challenged with F. tularensis subsp. holarctica strain HN63. The bacterium was cultured on blood cysteine glucose agar plates (supplemented with 10 ml of 10% (wt/vol) histidine per litre) at 37 C. for 18 hours.
(37) For vaccination of rats with LVS, Lot 4, bacteria were inoculated onto blood cysteine glucose agar (BCGA) and incubated at 37 C. for 48 h. Bacterial growth was recovered from the agar and re-suspended in phosphate buffered saline (PBS), and the OD.sub.600 adjusted to 0.14. The suspension was serially diluted ten-fold to the desired concentration for immunisation.
(38) For challenge studies, F. tularensis Schu S4 was inoculated onto BCGA and incubated at 37 C. for 24 h. Growth was recovered from agar, re-suspended in PBS and the OD.sub.600 adjusted to 0.1. One ml of this suspension was inoculated into 100 ml modified cysteine partial hydrolysate (MCPH) broth with 4% glucose and incubated with shaking at 180 rpm, at 37 C. for 48 h. OD.sub.600 of the culture was adjusted to 0.1 in PBS, and serially diluted to the desired concentration for aerosol challenge.
(39) To determine bacterial load in organs, organs were weighed, then homogenised through a 40 m cell sieve, serially diluted in PBS, and plated onto BCGA.
(40) Cloning, Sequencing and Expression of the F. tularensis O-Antigen Coding Region
(41) DNA was prepared from the F. tularensis subsp. tularensis strain SchuS4 by phenol extraction as described by Karlsson et al. (2000). The O-antigen coding region was amplified using the primers FTfragment2rev (5-GGATCATTAATAGCTAAATGTAGTGCTG-3; SEQ ID NO:30) and Oant1ftfwd (5-TTTTGAATTCTACAGGCTGTCAATGGAGAATG-3; SEQ ID NO:31) using the following cycling conditions: 94 C., 15 sec, 55 C., 15 sec, 68 C., 20 min; 35 cycles using Accuprime TaqHifi (Invitrogen U.K.). This was cloned into the TA cloning vector pGEM-T Easy to generate the vector pGAB1. The plasmid pGAB1 was digested with EcoRI and the insert was subcloned into the vector pLAFR to generate the construct pGAB2.
(42) Immunofluorescence Imaging of E. coli Cells Carrying F. tularensis O Antigen Coding Region
(43) Immunofluorescence was carried out as previously described [17] with the modification that the IgG2a mouse monoclonal antibody FB11 was used to detect F. tularensis O antigen (1 l/ml in 5% (v/v) FCS/PBS).
(44) Bacterial Strains and Plasmid Construction
(45) Escherichia coli CLM24 (17) was used as the host strain for protein expression and glycoconjugate production. CLM24 (a ligase negative strain) was stably transformed with the plasmid pGab2 (24), a construct created from insertion of the F. tularensis subspecies tularensis strain SchuS4 O-antigen into the low copy number expression plasmid pLAFR (25). pGab2 is tetracycline-selectable and constitutively expressed. Following confirmation of the expression of the F. tularensis O-antigen, the resulting strain was then transformed with the plasmid CLM24 contained a plasmid encoded C. jejuni PglB, pGVXN114, which expresses the C. jejuni glycotransferase pglB Finally, the resulting strain was transformed with the plasmid pGVXN150:GT-ExoA, creating a three plasmid system for production of the glycoconjugate. The GT-ExoA construct was engineered to expressed a modified version of P. aeruginosa Exotoxin A that was synthesized by Celtek Bioscience, LLC in the vector pGH and closed into a vector derived from pEC415 using the restriction enzymes NheI and EcoRI (NEB). The synthesized protein contains two internal modifications that allow glycosylation of the protein by PglB (24), as well as containing four N-glycosylation sequons at the N terminal and an additional 4 at the C terminals glycotags. In addition, a hexa-histidine tag was added to the C-terminus of the protein to facilitate putification and an and an E. coli DsbA signal peptide was added to the N-terminal sequences enabling Sec-dependent secretion to the periplasm. pGVXN150: GT-ExoA is ampicillin resistant and L-(+)-Arabinose inducible. The construct sequence was then confirmed using Sanger sequences with the primers GTExoA NF (GCGCTGGCTGGTTTAGTTT, SEQ ID NO 32), GTExoA NR (CGCATTCGTTCCAGAGGT, SEQ ID NO 33), GTExoA CF (GACAAGGAACAGGCGATCAG, Seq ID NO 34) and GTExoA CR (TGGTGATGATGGTGATGGTC, SEQ ID NO 35).
(46) Culture and Glycoprotein Expression Conditions
(47) For all experiments, E. coli CLM24 was cultured in Luria-Bertani (LB) broth (Fisher Scientific) supplemented with appropriate antibiotics in the following concentrations: ampicillin 100 g/mL, tetracycline 20 g/mL, and spectinomycin 80 g/mL. The addition of manganese chloride at the time of protein and PglB induction was at a final concentration of 4 mM, and made up as a 1 M stock fresh prior to each experiment. Cultures were incubated at 37 C. at 110 RPM for 16-20 hrs for large-scale preparation. For three plasmid system glycoconjugate production, an overnight LB culture of E. coli CLM24 harbouring p114, pGvn150:GT-ExoA and pGab2 was sub-cultured in a 1:10 dilution of LB broth (Fisher Scientific) with antibiotics, and grown to mid log phase. pGVXN150:GT-ExoA was induced by addition of 0.2% L-(+)-Arabinose (Sigma), and C. jejuni PglB induced with 1 mM IPTG, followed by incubation for an initial 4 hours. Another addition of 0.4% L-(+)-Arabinose was then added and cultures were incubated overnight.
(48) Production and Purification of Glycoconjugate Vaccine
(49) E. coli CLM24 carrying the vectors pGAB2, pGVXN114 and pGVXN150 was grown for 16 h in 200 mL LB broth at 37 C., 180 rpm. This was used to inoculate 1.8 L of LB broth and further incubated at 110 r.p.m. 37 C. to an OD.600 nm reading of 0.4 to 0.6. L-(+)-arabinose was then added to a final concentration of 0.2% w/v and IPTG to a final concentration of 1 mM to induce expression of ExoA and Cj PglB respectively; At this point in time manganese chloride at a final concentration of 4 mM was also added. Following 5 hours of incubation, 0.2% w/v L-(+)-arabinose was added again and the culture left to incubate overnight.
(50) Cells were harvested by centrifugation at 5300 g for 30 min, and pelleted cells were then resuspended in an ice cold lysis solution composed of 50 mM NaH.sub.2PO.sub.4, 300 mM NaCl, 10 mM imidazole, pH 8.0 (adjusted with 5 M NaOH) supplemented with 1 mg/ml lysozyme and 1 l/ml Benzonase nuclease (Novagen). Then, cells were subjected to five rounds of lysis using a pre-chilled Stansted High Pressure Cell Disruptor (Stansted Fluid Homogenizer) under 60,000 psi in continuous mode. Cell debris was removed by centrifugation at 10,000 r.p.m. for 60 m, the supernatant was collected The resulting supernatant was kept on ice while being loaded onto a GE Healthcare HIS trap HP 1 mL column. Then, the column was washed in buffer containing 50.0 mM NaH.sub.2PO.sub.4; 300 mM NaCl.sub.2; 20 mM imidazole lysis while attached to an AKTA purifier. Material was eluted and collected in 1 mL fractions with an imidazole gradient of 30-500 mM elution buffer that also contained 20% v/v glycerol and 5% w/v glucose. The collected fractions were then visualised by Western blot and the most glycosylated F. tularensis carrier proteins conjugated to F. tularensis O-antigen were chosen for pooling and buffer exchange (using VivaSpin 2 (VivaProducts) into PBS 20 v/v % glycerol, prior to quantification with a BCA Protein Assay Kit (Pierce Biotechnology, USA).
(51) This generated a typical yield of 2-3.5 mg/ml of glycoconjugate per 2 L of E. coli culture.
(52) The same techniques were used for the generation of the sham C. jejuni heptasaccharide ExoA glycoconjugate encoded by pACYCpgl [18].
(53) Using the E. coli Chromosomally Inserted Strain CLM 24 CedAPglB:
(54) Escherichia coli strain CLM24 with a chromosomally inserted copy of pglB were grown in Luria-Bertani (LB) broth at 37 C., with shaking. Antibiotics were used at the following concentrations: tetracycline 20 g ml.sup.1 and ampicillin 100 g ml.sup.1. Tetracycline was used to maintain the plasmid pGAB2 coding for Francisella tularensis O antigen and ampicillin was used to maintain the plasmid coding for the acceptor carrier protein.
(55) E. coli cells were grown for 16 h in 200 ml LB broth at 37 C., with shaking. This was used to inoculate 1.8 l of LB broth and further incubated with shaking at 37 C. until an OD.sub.600 reading of 0.4-0.6 was reached. At this point L-(+)-arabinose was added to a final concentration of 0.2% w/v and IPTG to a final concentration of 1 mM to induce expression of the acceptor protein and pglB, respectively; after another 5 h of incubation, 0.2% w/v L-(+)-arabinose was added again and the culture left to incubate overnight.
(56) Cells were harvested by centrifugation at 5300g for 30 min, and pelleted cells were incubated at room temperature for 30 min in a lysis solution composed of 10 BugBuster protein extraction reagent (Novagen) diluted to 1 in 50 mM NaH.sub.2PO.sub.4, 300 mM NaCl, 10 mM imidazole, pH 8.0 supplemented with 0.1 percent Tween, 1 mg ml.sup.1 lysozyme and 1 l ml.sup.1 Benzonase nuclease (Novagen). Cell debris was removed by centrifugation at 7840 g for 30 min, the supernatant was collected and 1 ml Ni-NTA agarose (QIAGEN) was added to the supernatant. The slurry-lysate was incubated for 1 h at 4 C. with shaking then loaded into 10 ml polypropylene columns (Thermo Scientific). His-tagged ExoA was purified by the addition of an elution buffer according to manufacturer's instructions (QIA expressionist, QIAGEN) containing 250 mM imidazole with the addition of 20 percent glycerol and 5 percent glucose.
(57) Alternatively cells were grown in LB agar plates containing tetracycline, ampicillin, IPTG to a final concentration of 50 M and L-(+)-arabinose to a final concentration of 0.2% for 16 h at 37 C. Cells were subsequently harvested by scraping and protein purified as indicated above.
(58) Immunoblot Analysis
(59) To verify transfer and presence of the F. tularensis O antigen, samples were analysed by western blotting. E. coli cells were grown o/n in 10 ml LB broth and diluted to an O.D.600 nm of 1.0. Cells were centrifuged at 13,000 r.p.m. for 10 min, supernatant was removed and cells were resuspended in 100 l Laemmli buffer and lysed by boiling for 10 min before analysis by western blotting or silver staining. Mouse anti F. tularensis O-antigen monoclonal antibody FB011 (AbCam U.K.) was used at a dilution of 1:1,000, rabbit anti HIS monoclonal antibody was used to detect ExoA at a dilution of 1:10,000 (AbCam U.K.). Secondary antibodies used were goat anti mouse IRDye680 and IRDye800 conjugates used at 1:5000 dilutions. Signal detection was undertaken using the Odyssey LI-COR detection system (LI_COR Biosciences GmbH).
(60) Cytokine Response Analysis
(61) Spleen supernatants were assessed using mouse inflammatory cytometric bead array kit (CBA-BD biosciences) for IL-10, IL-12p70, IFN-, IL-6, TNF-, and MCP-1. Samples were incubated with the combined capture bead cocktail, and incubated for 1 h at room temperature. Following incubation, PE detection antibodies were added and incubated for a further 1 h. Samples were then washed and resuspended in FACS buffer. Cytokine concentrations were measured via quantification of PE fluorescence of samples in reference to a standard curve.
(62) BALB/c Mouse Challenge Studies
(63) Female Balb/C mice were obtained from Charles River Laboratories (Kent, U.K.) at 6-8 weeks of age. The pilot study was done in groups of 10 mice immunised with either 0.5 g F. tularensis LPS, 0.5 g F. tularensis glycoconjugate, 0.5 g F. tularensis glycoconjugate+SAS, 0.5 g sham glycoconjugate+SAS, 0.5 g sham glycoconjugate or SAS only. One group of mice were left untreated as challenge efficacy controls. Immunisations occurred on days 0, 14 and 28 via intra-peritoneal (IP) route. Mice were challenged 35 days post-immunisation with 100 CFU of F. tularensis strain HN63 by the IP route, delivered in 0.1 ml. Subsequent experiments used the same schedule with 15 mice per group and doses of 10 g of material per immunisation. Four weeks following final vaccination 5 mice from each group were tail bled to obtain sera for antibody analysis and culled at day 3 post-infection with spleens harvested to analyse bacterial load and cytokine response. For the enumeration of bacteria, spleen samples were homogenized in 2 ml of PBS through 40 m cell sieves (BD Biosciences) and 100 l aliquots were plated onto BCGA plates. F. tularensis LPS-specific IgM and total IgG levels were determined by ELISA as previously described [19]. All work was performed under the regulations of the Home Office Scientific Procedures Act (1986).
(64) Statistical Analysis
(65) Statistical analyses were performed using the program PASW (SPSS release 18.0). Survival data was analysed by pair-wise Log Rank test stratified by experiment. Cytokine and bacterial load data were analysed using univariate general linear models, using Bonferroni's post tests to further clarify significant differences.
(66) Production and Purification of Glycoconjugate Vaccine
(67) E. coli CLM24 carrying the vectors pGAB2, pGVXN114 and pGVXN150 was grown for 16 h in 200 mL LB broth at 37 C., 180 rpm. This was used to inoculate 1.8 L of LB broth and further incubated at 110 rpm. 37 C. until an O.D600 reading of 0.4 to 0.6 was reached. At this point L-(+)-arabinose was added to a final concentration of 0.2% and IPTG to a final concentration of 1 mM to induce expression of exoA and CjpglB respectively; after another 5 hours of incubation, 0.2% w/v L-(+)-arabinose was added again and the culture left to incubate o/n.
(68) Cells were harvested by centrifugation at 6,000 rpm. for 30 m, and pelleted cells were incubated at room temperature for 30 m in a lysis solution composed of 10BugBuster protein extraction reagent (Novagen) diluted to 1 in 50 mM NaH2PO4, 300 mM NaCl, 10 mM imidazole, pH 8.0 supplemented with 0.1% Tween, 1 mg/ml lysozyme and 1 l/ml Benzonase nuclease (Novagen). Cell debris was removed by centrifugation at 10,000 r.p.m. for 30 m, the supernatant was collected and 1 ml Ni-NTA agarose (QIAgen) was added to the supernatant. The slurry-lysate was incubated for 1 h at 4 C. with shaking then loaded into 10 ml polypropylene columns (Thermo scientific). His tagged ExoA was purified by the addition of an elution buffer according to manufacturer's instructions (QIA expressionist, QIAGEN) containing 250 mM imidazole with the addition of 20% w/v glycerol and 5% w/v glucose. Protein yields were estimated using a bicinchonic acid assay kit according to manufacturer's instructions (Pierce Biotechnology BCA protein Assay Kit, U.S.A.).
(69) For large-scale protein purification, material was isolated using GE Healthcare HIS trap columns and an AKTA purifier with an imidazole gradient of 30 mM to 500 mM. The collected fraction containing ExoA glycosylated with F. tularensis O-antigen was further purified using a resource Q anionic exchange column (GE Healthcare) with a NaCl gradient from 0 to 500 mM in 20 mM TrisHCl pH 8.0. This generated a typical yield of 2-3 mg/ml of glycoconjugate per 2 L of E. coli culture.
(70) The same techniques were used for the generation of the sham C. jejuni heptasaccharide ExoA glycoconjugate. The plasmid coding for this heptasaccharide was pACYCpgl carrying the entire Cjpgl cluster from C. jejuni 81116 [1].
(71) Protein Expression
(72) Escherichia coli strain CLM24 with a chromosomally inserted copy of pglB were grown in Luria-Bertani (LB) broth at 37 C., with shaking. Antibiotics were used at the following concentrations: tetracycline 20 g ml-1 and ampicillin 100 g ml-1. Tetracycline was used to maintain the plasmid pGAB2 coding for Francisella O-antigen and ampicillin was used to maintain the plasmid coding for the acceptor carrier protein. Additionally, a final concentration of 4 mM Manganese chloride was added as an additional co-factor to the cultures.
(73) E. coli cells were grown for 16 h in 200 ml LB broth at 37 C., with shaking. This was used to inoculate 1.8 l of LB broth and further incubated with shaking at 37 C. until an OD600 reading of 0.4-0.6 was reached. At this point L-(+)-arabinose was added to a final concentration of 0.2% w/v, 4 mM final concentration of manganese chloride, and IPTG to a final concentration of 1 mM to induce expression of the acceptor protein and pglB, respectively; after another 5 h of incubation, 0.2% w/v L-(+)-arabinose was added again and the culture left to incubate overnight.
(74) Cells were harvested by centrifugation at 5300g for 30 min, and pelleted cells were incubated at room temperature for 30 min in a lysis solution composed of 10 BugBuster protein extraction reagent (Novagen) diluted to 1 in 50 mM NaH2PO4, 300 mM NaCl, 10 mM imidazole, pH 8.0 supplemented with 0.1 percent Tween, 1 mg ml-1 lysozyme and 1 l ml-1 Benzonase nuclease (Novagen). Cell debris was removed by centrifugation at 7840 g for 30 min, the supernatant was collected and 1 ml Ni-NTA agarose (QIAGEN) was added to the supernatant. The slurry-lysate was incubated for 1 h at 4 C. with shaking then loaded into 10 ml polypropylene columns (Thermo Scientific). His-tagged ExoA was purified by the addition of an elution buffer according to manufacturer's instructions (QIA expressionist, QIAGEN) containing 250 mM imidazole with the addition of 20 percent glycerol and 5 percent glucose.
(75) Creation of WecA.sup. E. coli Strain
(76) The kanamycin resistance cassette from plasmid pKD4 was amplified using the following primers KnF 5-GTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACTGTGTAGGCT GGAGCTGCTTC-3 (SEQ ID NO 28) and KnR 5-GTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAACATATGAA TATCCTCCTTAGCTGCAG-3 (SEQ ID NO 12) using accuprime taq hifi (Invitrogen UK) and the following cycling conditions 94 C./30 s, followed by 30 cycles of 94 C./30 s, 56 C./30 s, 68 C./90 s. These primers carry 5 end tails that are homologous to the wecA gene of Escherichia coli K-12. The PCR product was digested with DpnI and purified before transforming 1 g into E. coli K 12 carrying, the lambda red helper plasmid pKD20 (Datsenko and Wanner PNAS, One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products, Jun. 6, 2000 pp. 6640-6645). Bacteria were grown on LB agar plates containing 10 mM L-arabinose to induce rec recombinase expression for 48 hrs prior to plating on kanamycin plates. wecA gene deletions were detected by gene specific PCR and resistance to kanamycin.
(77) Animals
(78) Animals were kept in accordance with the Animals (Scientific Procedures) Act 1986. Codes of Practice for the Housing and Care of Animals used in Scientific Procedures 1989. Following challenge with F. tularensis, all animals were handled under UK Advisory Committee on Dangerous Pathogens animal containment level 3 conditions within a half-suit isolator compliant with British Standard BS5726.
(79) Female Fischer 344 rats were obtained from Harlan, UK. Rats were implanted with biotherm microchips sub-cutaneously.
(80) Rats were vaccinated with LVS in PBS via the sub-cutaneous (s.c.) route. Rats were vaccinated with 10 g glycoconjugate in 100 l PBS via the s.c. or intra-peritoneal route 3 times, 2 weeks apart. Aerosol challenge with F. tularensis Schu S4 occurred five weeks following final vaccination.
(81) Following challenge, animals were observed twice daily, and signs of disease and sub-cutaneous temperature recorded. Disease signs were assigned a score, and a cumulative score for disease observed was calculated. Animals were weighed once daily. Weight data was analysed using IBM SPSS V21.0. Weight data was taken as the differential weight from 1 day prior to challenge. Data was found to fit the normal, Gaussian distribution using Q-Q plots (not shown). The data was then analysed using a repeated measures General Linear Model. Validity of the data for this test was further established using Levene's tests for unequal variance (not shown). Individual comparisons, pairwise and dependant or independent of time points, were performed using the Bonferroni's correction. Humane end points of more than 15% weight loss, and/or sub-cutaneous temperature reading of less than 33 C. were used. Animals underwent Schedule 1 euthanasia with i.p. administered euthatal.
(82) Aerosol Challenge
(83) Rats were exposed to an aerosol of F. tularensis SchuS4 by the inhalational route in a nose-only exposure unit (DstI, in house) utilising a 6-jet Collison atomiser (DstI, in house) attached to a contained Henderson Piccolo arrangement to condition the aerosol to 50% (5%) relative humidity, and controlled by the (AeroMP) Aerosol Management Platform aerosol system (Biaera Technologies L.L.C.). The animals were exposed to the aerosolised bacteria for 10 minutes, with impingement of the aerosol cloud sampled at the midway point of challenge into PBS via an All-Glass Impinger (AGI-30; Ace Glass, Vineland, NJ).
(84) Following challenge, the impinged aerosol was enumerated by serial dilution and plating onto BCGA plates. Calculated retained dose was calculated from aerosol concentration (cfu/L of air), using Guyton's formula (27), for minute respiratory volume, and assuming 40% retention of 1-3 m droplets (26).
(85) Cell Isolation and Culture
(86) Rat spleens were homogenised through a 40 m sieve using a sterile plunger and colleved into L15 medium. The isolated splenocytes were diluted to 210.sup.6 cells/ml in medium and cultured in the presence of either medium alone, sonicated LVS whole cells (10 g/ml, DstI), sonicated Schu S4 whole cells (10 g/ml, DstI), purified ExoA (5 g/ml, LSHTM) or Concanavalin-A (Con-A, 5 g/ml, Sigma-Aldrich). For cultures of cells from LVS infected or PBS control rats, splenocytes were diluted in L-15 medium (Life Technologies) supplemented with 10% Foetal Bovine Serum (Sigma), non-essential amino acids (Life Technologies), 2-mercaptoethanol (Life Technologies), 100 U/ml penicillin and 100 mg/ml streptomycin sulphate (Life Technologies) and then cultured at 37 C. in the absence of a controlled CO.sub.2 environment. For cultures of cells from ExoA vaccinated rats, splenocytes were diluted in RPM11640 medium (Life Technologies), supplemented as described above and then cultured at 37 C. with 5% CO.sub.2.
(87) Measurement of IFN by Enzyme Linked Immunosorbent Assay (ELISA). Splenocytes (210.sup.5 per assay well) were cultured in duplicate in the presence of antigen for 72 hours and supernatants harvested and stored at 20 C. prior to use. The expression of IFN was determined in plasma supernatants using a commercial rat IFN ELISA kit (Mabtech) with responses determined by measurement of optical density at 450 nm (OD.sub.450 nm). For reporting, the OD.sub.450 nm results were normalised by transformation into units of g/ml by generating a standard curve using recombinant rat IFN, as supplied with the assay kit.
(88) Flow cytometry. Splenocytes (210.sup.6 cells per assay well) were cultured in the presence of antigen for 20 hours with Brefeldin-A (10 ug/ml, Sigma-Aldrich) added to culture medium for the final 4 hours of the culture. Cells were harvested by centrifugation (300 g/5 mins) and stained using the following anti-rat surface marker antibodies; CD3-Brilliant Violet 421, CD4-FITC (clone OX35, eBioscience) and CD8-PerCP eFluor710 (clone OX8, eBioscience). Cells were stained for 15 minutes at 4 C. in the presence of a fixable yellow (405 nm) cell viability dye (Life Technologies) and then fixed for 16 hours at 4 C. in Cytofix fixation reagent (BD Biosciences). Fixed cells were permeabilised in BD Biosciences Permeabilistation Buffer and then stained intracellularly for 30 minutes at 4 C. using anti-rat antibodies IFN-PE (clone DB-1, BD Biosciences) and IL17A-APC (clone eBio17B7, eBioscience). Stained samples were analysed using a FACSCanto II analyser equipped with 405, 488 and 633 nm lasers (BD Biosciences). An example gating strategy for measurement of intracellular expression of IFN and IL-17 is given in
(89) ImageStream Staining and Data Capture
(90) 500 l whole rat blood was blocked with 5 l anti-rat CD32 antibody (BD Pharmingen Cat No: 550271), incubated for 5 minutes at room temperature (.sup.23 C.). Following blocking 40 l anti-rat CD45-FITC (BD Pharmingen Cat No: 554877), 50 l anti-rat CD3-APC (BD Pharmingen, Cat No: 557030) and 120 l 0.5% BSA in PBS were added to the blood sample. Samples were then incubated at 4 C. for 45 minutes. Blood samples were subsequently centrifuges at 300g for 10 minutes and the supernatants removed. 1 ml BD lysis buffer (BD Pharmingen) was added and samples incubated for 10 minutes at room temperature (.sup.23 C.), before being centrifuged at 300g for 10 minutes. Supernatants were removed and samples were washed and centrifuged again before being re-suspended in 100 l of 4% paraformaldehyde and stored at 4 C. Samples were counterstained with 3 M 4,6-diamidino-2-phenylindole (DAPI) 3 minutes before data capture.
(91) Data was collected using an dual camera imagestream X Mk II equipt with a 405 nm laser (set to 2 mW), a 488 nm laser (set to 100 mW) and a 642 nm laser (set to 150 mW). Samples were acquired using Inspire (version 2.0) where a minimum of 20,000 in-focus (Gradient RMS<50) nucleated (Intensity Ch07<110.sup.4) were captured per rat. Single stained samples were also created and acquired for the construction of a compensation matrix. This was performed in inspire using the compensation wizard during data capture. Data are generated from a minimum of 4 mice. Statistical analysis was completed using GraphPad Prism version 6.02.
(92) Data validity was first assessed using a Brown-Forsythe test for variance after which a two-way ANOVA was completed with Dunnett's multiple comparisons test was completed.
(93) ELISA for Anti Gt-ExoA Antibody Titre
(94) Plates were coated with 5 g/ml Gt-ExoA in PBS and, 100 l per well, and incubated at 4 C. overnight. After blocking with 1% skimmed milk powder in PBS for 2 hours at 37 C., plates were washed three times with 0.05% TWEEN in PBS. Sera was applied to plates at 1:50 and serially diluted 1:2 across the plate, in 1% skimmed milk powder. Bound IgG rat antibody was detected using anti-rat antibody conjugated to HRP at 1:2000 in PBS, and developed using 10 mM 2,2-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) in citrate buffer, with 0.01% H.sub.2O.sub.2. OD was measured at 414 nm. Antibody titre was defined as the reciprocal of the highest dilution of serum that had a mean OD value at least 3 standard deviations higher than the mean OD of non-vaccinated serum.
EXAMPLE 1
(95) Fischer 344 Rats are Susceptible to <10 CFU F. tularensis Schu S4 Via the Aerosol Route
(96) Groups of 5 rats were challenged with a range of doses of Francisella tularensis Schu S4 via the aerosol route, from approximately 9 cfu to 3.1510.sup.4 cfu. To determine bacterial dissemination following challenge, groups of five rats from each dose group were sacrificed at 7 days post infection. At this time, all rats challenged with 3.1510.sup.4 cfu, and 3 of 5 rats challenged with 2.2210.sup.3 had already succumbed to infection. At 7 days post-infection, all infected animals had highly colonised lungs, containing greater than 110.sup.6 cfu/g of lung tissue. The most heavily colonised lungs, from animals challenged with 2.2210.sup.3 contained up to 110.sup.8 cfu/g. Bacteria had disseminated from lungs to liver and spleen in all infected rats. All rat spleens and livers at 7 days post infection contained greater than 110.sup.4 cfu/g tissue Schu S4 bacteria.
(97) All rats challenged with 2.9410.sup.2 to 3.1510.sup.4 cfu rats succumbed to infection within 14 days of challenge (
EXAMPLE 2
(98) LVS Disseminates to Lungs, Liver, and Spleen Following Challenge, Inducing Expansion of Neutrophil and Macrophage Populations in the Blood.
(99) To determine dissemination and clearance of bacteria, and determine host cell responses to LVS infection, groups of five rats were vaccinated with 5.5610.sup.5 or 5.5610.sup.7 CFU of LVS sub-cutaneously. Following vaccination, rats were sacrificed at 3, 7 and 21 days post-vaccination to determine bacterial dissemination and clearance. There was no significant difference in colonisation of organs between rats vaccinated at the 2 different doses. At 3 days post-vaccination, all rats were colonised in the liver and spleen, whilst lungs had low numbers of detectable bacteria. At 7 days, no bacteria could be detected in lungs and liver of vaccinated rats, whilst spleens were still colonised. No bacteria were detected in lungs, liver or spleen at 21 days post infection.
(100) Rat immune cells in whole blood were quantified using the ImageStream X MkII. Cell types were differentiated by CD45 intensity verses side scatter intensity identifying three distinct populations namely, lymphocytes, monocytes/macrophages and neutrophils (
EXAMPLE 3
(101) LVS Induces T Cell Memory Response Characterised by IFN and IL-17 Expression on Re-Stimulation
(102) To determine the splenocyte re-stimulation response following LVS vaccination, 5 rats were sacrificed at day 21 and day 35 post-vaccination and splenocytes were harvested from rat spleens. IFN secretion by splenocytes was measured following re-stimulation with a range of antigens. The absence of responses in the PBS control rats indicates the antigen specific nature of these memory re-call responses, whilst all cells secreted IFN in response to the mitogen ConA indicating the cells potential for responding. LVS vaccinated rat splenocytes secreted significantly more IFN in response to stimulation with all three F. tularensis whole cell antigen preparations than PBS vaccinated rats (
(103)
(104) Further investigation of memory response to LVS was investigated by measurement of intracellular expression of IFN and IL-17 following antigen stimulation, 21 days post-infection with LVS. LVS infection resulted in the induction of both CD4 and CD8 effector memory responses, as demonstrated by antigen-specific IFN responses by these cell phenotypes (
EXAMPLE 4
(105) Glycoconjugate Induces Antigen Specific Memory Response and IgG Antibody
(106) Similarly to LVS vaccinated rats, splenocytes were isolated from glycoconjugate vaccinated rats at 35 days post final vaccination. Cells were re-stimulated both with crude antigen preparations, and recombinant ExoA protein for 72 hours. IFN secretion following re-stimulation of splenocytes from LVS challenged rats with crude F. tularensis antigens, corroborates intracellular IFN expression previously described (
EXAMPLE 5
(107) LVS and F. tularensis O-Antigen+Exoprotein A Glycoconjugate Both Protect Against Pulmonary Tularemia
(108) Rats were vaccinated with 5.3910.sup.7 LVS via the s.c. route, and glyconojugate by both the s.c. and i.p. route. Five weeks later the animals were challenged with an average 5.4810.sup.2 F. tularensis Schu S4. All vaccinated rats survived 21 days post aerosol challenge (
(109) Rats vaccinated with Gt-ExoA by either route, or with LVS did not become febrile (data not shown) and showed no signs of disease (
(110) Weight change in rats after challenge, compared to 1 day before challenge, was shown to be significantly different over time between all groups of vaccinated rats and their relevant controls (
(111) The surviving control rats all resolved signs of disease and had recovered some weight by 21 days following infection. F. tularensis was not detected in lungs, liver or spleen of LVS and glycoconjugate vaccinated rats at 21 days post infection whilst all surviving MF59 only vaccinated rats were colonised with F. tularensis in lung, liver and spleen at 21 days post infection.
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