SYSTEM AND METHOD FOR IDENTIFYING THE PRESENCE OF INSECTS
20190364872 ยท 2019-12-05
Inventors
Cpc classification
A01M1/04
HUMAN NECESSITIES
A01M1/026
HUMAN NECESSITIES
Y02A50/30
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
G01N33/5308
PHYSICS
A01M1/023
HUMAN NECESSITIES
C12N15/115
CHEMISTRY; METALLURGY
G01N33/542
PHYSICS
International classification
Abstract
A system and method to detect the presence of bed bugs are disclosed. A system detecting the presence of bed bugs comprises an aptamer solution that includes a base ligand, a fluorophore ligand that includes at least one fluorophore, and a quencher ligand that includes at least one quencher, a liquid application tool, and a fluorescent light source. A method of detecting the presence of bed bugs, comprising providing a liquid application tool that carries an aptamer solution, applying the aptamer solution to a target area, shining fluorescent light on the target area, and observing the target area under the fluorescent light. If there are light spots under the fluorescent light, bed bugs have been present.
Claims
1. A compound including an aptamer having an affinity for a substance associated with bed bugs, a nucleotide strand, at least one quencher joined to at least one of the aptamer and the nucleotide strand, and at least one fluorescent label joined to at least one of the nucleotide strand and the aptamer, the compound being adapted to include a first state wherein the nucleotide strand is joined to the aptamer with the quencher being in sufficiently close proximity to the fluorophore to suppress re-emittance of light by the fluorophore and a second state wherein the nucleotide strand is sufficiently dislodged from the aptamer with the quencher being sufficiency distance from the fluorophore to permit re-emittance of light by the fluorophore.
2. The compound of claim 1, wherein the aptamer is a histamine aptamer.
3. The compound of claim 1, wherein the fluorescent label is a fluorophore.
4. The compound of claim 3, wherein the fluorophore has an emission in the range between 500 and 550 nm.
5. A solution comprising a liquid and the compound of claim 1.
6. A system for detecting bed bugs comprising a container, the solution of claim 5 positioned in the container, and a light source emitting a wavelength, wherein the fluorescent label is configured to re-emit light in response to the wavelength when the compound is in the second state.
7. The system of claim 4, wherein the container is a spray bottle.
8. The system of claim 4, wherein the container is a wipe.
9. The system of claim 4, wherein the light source is a fluorescent light source.
10. A method of identifying the presence of a bed bug, comprising: providing a container having a histamine aptamer solution, applying the aptamer solution to a target area, shining fluorescent light on the target area, and observing the target area under the fluorescent light.
11. The method of claim 10, wherein the aptamer solution comprises an histamine aptamer, at least one fluorescent label, and a quencher positioned sufficiently close to the fluorescent label to suppress re-emittance of light by the fluorescent light prior to the applying step and spaced apart far enough from the fluorescent label to permit re-emittance of light by the fluorescent light after the applying step.
12. The method of claim 8, wherein the container is a spray bottle.
13. The method of claim 8, wherein the container is a wipe.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0006] The previously described aspects of this disclosure will grow to be appreciated at a greater level once references to the following accompanying illustrations are expounded upon.
[0007]
[0008]
[0009]
[0010]
[0011] The embodiments disclosed below are not intended to be exhaustive or limit the disclosure to the precise form disclosed in the following detailed description. Rather, the embodiments are chosen and described so that others skilled in the art may utilize their teachings. It will be understood that no limitation of the scope of the disclosure is thereby intended. The disclosure includes any alterations and further modifications in the illustrative devices and described methods and further applications of the principles of the disclosure which would normally occur to one skilled in the art to which the disclosure relates.
DETAILED DESCRIPTION
[0012] For the purposes of promoting an understanding of the principles of the present disclosure, reference will now be made to the embodiments illustrated in the drawings, and specific language will be used to describe the same. It will nevertheless be understood that no limitation of the scope of this disclosure is thereby intended.
[0013]
[0014] Insects, such as bed bugs, lice, and fleas, are used to illustrate use of the systems and methods described herein to detect the presence of such insects. However, the systems and methods described herein can be used to detect the presence of other animals and organisms, such as bacteria including cdiff, staph, etc., and other substances, such as unsafe food including spoiled fish.
[0015] According to the present disclosure, compound 10 is a solution that includes a delivery medium, such as water or a buffer solution such as phosphate buffer saline and a substance 20 that has an active state that re-emits light in the presence of a target substance and passive state that suppresses re-emittance of light when the target substance is not present. The target substance is associated with a specific insect, such as a bed bug (or other organism or other item). When a bed bug enters an area, it deposits the target substance, such as bedbug excrement. If a user suspects a bed bug may be present or have been present in the area, the user applies solution 10 to the area to be tested using bottle 14, wipe 16, or other delivery system. If the bedbug excrement is present in the tested area, at least a portion of solution 10 changes from the passive state to the active state. If a light, such as flashlight 18, have a specific wavelength is shone on the tested area, the portion of solution 10 that is active will re-emit light, either at the same or a different wavelength. A user detecting the re-emitted light will know that bedbug excrement is present in the tested area, indicating that one or more bed bugs is present or has been present in the tested area. The failure to detect re-emitted light indicates that no bedbug excrement is present in the tested area, indicating that no bed bugs have been present in the tested area or the area, such as a bed sheet, has been sufficiently cleaned to remove bedbug excrement. According to one embodiment, a concentration range in the micro molar to pico molar is provided
[0016] According to one aspect of the present disclosure, substance 20 includes a nucleotide strand in the form of an aptamer 22 that has an affinity for a target substance 24 associated with a specific insect, such as a bed bug. Example aptamers 22 include stable ssDNA or RNA ligands that can bind with high affinity and specificity to target substance 24, such as an antigen, or other small molecules, peptides, proteins (including nitrophorin, lice and other proteins discussed in U.S. patent application Ser. No. 16/176,483, titled Test Strip to Identify Insect & Arachnid Ectoparasites, and other proteins), cells, and/or tissue associated with organisms including insects.
[0017] One such target substance is a component of bedbug excrement, such as histamine. An example aptamer 22 is a histamine aptamer, such as the H2 aptamer that has a high affinity for histamine. As mentioned above, this systems and methods described herein can be used to detect unsafe conditions including unsafe food. For example, a histamine aptamer can also be used to detect certain spoiled fish.
[0018] Solution 10 also includes a light re-emitting base in the form of a nucleotide strand 26. Strand 26 is synthesized to include a light re-emitting substance, such as a fluorophore ligand including a fluorophore 28, which re-emits light when exposed to a light source, such as flashlight 18, of a specific wavelength. The type of light 16 should be chosen depending on fluorophore 28 and may emit UV, blacklight, bluelight, any fluorescent, LED or any other lights. The re-emitted light may be at the same or different frequency as source light 16.
[0019] Aptamer 22 is synthesized to include a light re-emitting suppressor such as a quencher ligand including a quencher 30. According to one embodiment, fluorophores with an emission in the range between 500 and 550 nm such as FAM and HEX are quenched with quenchers with absorption maxima between 450 and 550 nm such as dabcyl and BHQ-1. According to another embodiment, fluorophores with emission above 550 nm such as rhodamines and Cy3/Cy5 are quenched with quenchers with absorption maxima above 550 nm such as Black Hole Quencher-2 or DDQ-II quencher. In the passive state of solution 10 mentioned above, nucleotide stand 26 is annealed or otherwise joined to aptamer 22 so that quencher 30 is in close enough proximity to fluorophore 28 to suppress or block its ability to re-emit light as shown in the left side of
[0020] If light 16 from flashlight 18 shines on solution 10, fluorophore 28 in the portion of solution 10 in the passive state will not re-emitted light. A user that detects a lack of re-emitted light then knows that target substance 24 associated with the specific insect, such as a bed bug, is not present in the tested area. Based on this knowledge, the user knows the specific insect was likely not in the target area in the past or the target area has been sufficient cleaned to remove target substance 24.
[0021] As mentioned above, aptamer 22 has a high affinity for target substance 24. The affinity is so high, that nucleotide strand 26 will be dislodged from aptamer 22 when target 24 is in close enough proximity to aptamer 22 as shown in the right side of
[0022] According to the present disclosure a system and method is provided for detecting target 24 in a large volume liquid sample. Aptamer 22 are labeled with a fluorophore or horseradish proxidase (HRP) 28 for colorimetric sensing and functionalized (attached) to a nitrocellulose strip to capture target 24 in solution. Target 24 can be the excrement of a bedbug suspension. The capture of target 24 with aptamer 22 would release the HRP (or fluorophore) 28 labeled complementary DNA sequences into the solution. The ensuring fluorescence can be directly viewed by a fluorescence lamp 18. If a HRP 28 is provided, then reaction may be catalyzed by tetra methyl blue (TMB) to indicate the presence of target bacteria in liquid sample to produce a colorimetric signal, which could be recognized by naked eyes, or a more precise quantitative determination. As a combination of target enrichment and enzyme-based amplification of colorimetric signal, the proposed method facilitates the monitor of target in large volume liquid samples.
[0023] According to the present disclosure, a fluorescent aptamer-based biosensor is provided to be sprayed on solid samples. Graphene oxides are provided to quench the fluorescence from corresponding tags (Dong et al., 2010). With aptamer and graphene oxides, a biosensor for the detection of histamine target on solid samples, with a spray-based strategy is provided. The graphene oxides are modified with suitable polymers which increase their affinity to the surface. Aptamers hybridized with complementary sequences which are linked with fluorophore are conjugated to the graphene oxides. The fluorescence from the fluorophore is quenched by the graphene oxides due to fluorescence resonance energy transfer. The obtained modified graphene oxides with aptamer sequences as probes are then dispersed in suitable solutions. During detection, the probe solution is sprayed on the surface. The recognition of aptamer to target will release the fluorophore-labeled complementary sequence, which are collected by a suitable rinse step while the graphene oxides stay on the sample due to the affinity from polymer modification. The fluorescence from the fluorophore conjugated on complementary sequences would restore as the detectable signal for the presence of targets. The methods may be used on the solid sample, requiring no long and complex sampling process, thus fit for on-site detection of bed bugs.
[0024] According to present disclosure, a wet wipe-based aptamer sensor for the detection of a target on solid samples is provided. A wet wipe, which could provide a liquid environment for the aptamer-based recognition, is used as a biosensing platform for the detection of target 24 on the surface of solid samples. An aptamer-based fluorescent detection strategy is provided for the detection of target on solid samples. The recognition is based the corresponding aptamer, where fluorophore is conjugated to one end of aptamer sequence. A complementary sequence linked with nanoparticle or a quencher which quenches the fluorescence is hybridized with the aptamer, like the pattern proposed in the reported method (Lerga et al., 2019). Then, through aptamer sequence, the hybridized DNA sequences are linked to wet wipe, which contains a suitable solution for the stability and recognition activity of aptamer. The obtained wet wipe could be stored in sealed containers. During detection, the modified wet wipe covers on the solid samples and contact the surface compactly. With incubation, the capture of target with aptamer would detach the complementary sequence thus separate the nanoparticles and fluorophore on aptamer sequence. After incubation, the solid sample is removed and the wet wipe is illuminated with UV light. The fluorescence from the fluorophore would be restored for the determination of the existence of target bacteria on the surface of solid sample. Furthermore, by integrating culture media on the wet wipe, a pre-culture step could be used along with the proposed biosensor for improved sensitivity. Additional details are provided in Mairal Lerga, T.; Jauset-Rubio, M.; Skouridou, V.; Bashammakh, A. S. O.; El-Shahawi, M. S.; Al-Youbi, A. O.; O'Sullivan, C. K. Anal. Chem. 2019 and 2. Dong, H. F.; Gao, W. C.; Yan, F.; Ji, H. X.; Ju, H. X. Anal. Chem. 2010, 82, 5511-5517.
[0025] Those having ordinary skill in the art will recognize that numerous modifications can be made to the specific implementations described above. The implementations should not be limited to the particular limitations described. Other implementations may be possible.