METHOD FOR PURIFYING ANTIBODIES USING PBS
20190330269 ยท 2019-10-31
Inventors
- Samir Hussein Shaban (Ashburn, VA, US)
- Mary Paulette Koleck (Walkersville, MD, US)
- David Alan Meh (Columbia, MD, US)
- Gerald Mark Farquharson (Vienna, VA, US)
- Timothy O. Atolagbe (Elkridge, MD, US)
- George Mitra (Potomac, MD, US)
Cpc classification
B01D15/24
PERFORMING OPERATIONS; TRANSPORTING
C07K1/34
CHEMISTRY; METALLURGY
C07K2317/14
CHEMISTRY; METALLURGY
C07K2317/24
CHEMISTRY; METALLURGY
C07K2317/73
CHEMISTRY; METALLURGY
B01D15/3809
PERFORMING OPERATIONS; TRANSPORTING
C07K2317/76
CHEMISTRY; METALLURGY
C07K1/36
CHEMISTRY; METALLURGY
International classification
C07K1/36
CHEMISTRY; METALLURGY
B01D15/36
PERFORMING OPERATIONS; TRANSPORTING
B01D15/38
PERFORMING OPERATIONS; TRANSPORTING
B01D61/14
PERFORMING OPERATIONS; TRANSPORTING
B01D15/12
PERFORMING OPERATIONS; TRANSPORTING
C07K1/34
CHEMISTRY; METALLURGY
Abstract
Disclosed here includes a method for purifying a biologic composition, comprising diafiltering the biologic composition into a composition comprising phosphate buffered saline (PBS) to obtain a purified composition. The method disclosed here can be particularly useful for removing one or more impurities from the biologic composition, such as bis(2-hydroxyethyl)amino-tris(hydroxymethyl)methane (Bis-tris).
Claims
1. A method for purifying a biologic composition, comprising diafiltering the biologic composition with phosphate buffered saline (PBS) to obtain a purified composition.
2-19. (canceled)
20. A method for purifying a monoclonal antibody, comprising: (a) passing a first composition comprising the monoclonal antibody through an affinity chromatography column to obtain a second composition comprising the monoclonal antibody; (b) lowering the pH of the second composition to obtain a third composition; (c) washing the third composition with a solvent-detergent to obtain a fourth composition; (d) washing the fourth composition to remove the solvent-detergent to obtain a fifth composition; (e) passing the fifth composition through a cation exchange chromatography column to obtain a sixth composition comprising the monoclonal antibody; (f) subjecting the sixth composition to nano-filtration to obtain a seventh composition; (g) passing the seventh composition through an anion exchange chromatography column to obtain an eighth composition comprising the monoclonal antibody and Bis-tris; and (h) diafiltering the eighth composition into a composition comprising PBS to obtain a ninth composition comprising the monoclonal antibody but substantially free from Bis-tris.
21-38. (canceled)
39. A method for purifying a biologic composition, comprising diafiltering the biologic composition with phosphate buffered saline (PBS) to obtain a purified composition, wherein the biologic composition comprises a ch14.18 monoclonal antibody.
40. The method of claim 39, wherein the ch14.18 monoclonal antibody is an isolated protein.
41. The method of claim 39, wherein the biologic composition further comprises at least one impurity, wherein the impurity is bis(2-hydroxyethyl)amino-tris(hydroxymethyl)methane (Bis-tris).
42. The method of claim 41, wherein the concentration of the Bis-tris in the biologic composition is 10 to 50 mM Bis-tris at a pH of 6.3 to 6.7.
43. The method of claim 41, wherein the diafiltering removes at least 50% of the Bis-tris from the biologic composition.
44. The method of claim 41, wherein the diafiltering removes at least 70% of the Bis-tris from the biologic composition.
45. The method of claim 39, wherein the concentration of the PBS is 10 to 50 mM Sodium Phosphate and 100 to 200 mM NaCl.
46. The method of claim 39, wherein the ch14.18 antibody is concentrated to a concentration of at least 2.0 to 5.0 AU before being diafiltered into the composition comprising PBS.
47. The method of claim 39, wherein the ch14.18 antibody is concentrated to a concentration of at least 4.0 to 6.0 AU before being diafiltered into the composition comprising PBS.
48. The method of claim 39, further comprising isolating and purifying the ch14.18 antibody using at least one chromatography column.
49. The method of claim 48, comprising isolating and purifying the ch14.18 antibody using at least one affinity chromatography column, at least one cation exchange chromatography column, and/or at least one anion exchange chromatography column.
50. The method of claim 49, wherein the anion exchange chromatography column is a multimodal medium column.
51. The method of claim 50, wherein the ch14.18 antibody is eluted from the multimodal medium column using a composition comprising Bis-tris.
52. The method of claim 39, wherein at least three volume units of the biologic composition is diafiltered into one volume unit of the composition comprising PBS.
53. The method of claim 39, wherein at least five volume units of the biologic composition is diafiltered into one volume unit of the composition comprising PBS.
54. The method of claim 39, wherein the purified composition is further diafiltered into a composition comprising histidine.
55. A method for removing bis(2-hydroxyethyl)amino-tris(hydroxymethyl)methane (bis-tris) from a biologic composition, comprising diafiltering the biologic composition with phosphate buffered saline (PBS) to remove at least 50% of the bis-tris from the biologic composition, wherein the biologic composition comprises a ch14.18 monoclonal antibody.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0017]
[0018]
[0019]
[0020]
[0021]
[0022]
DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS
[0023] Many embodiments described herein relate to a method for purifying a biologic composition, comprising diafiltering the biologic composition with phosphate buffered saline (PBS), to obtain a purified composition.
[0024] Biologic Composition
[0025] Many biologic compositions known in the art can be purified using the methods described herein. The biologic composition can comprise at least one material created biologically rather than chemically synthesized, including proteins, nucleic acids, cells, tissues, vaccines, and blood or a component thereof.
[0026] The biologic composition can comprise, for example, at least one isolated protein including a recombinant protein. The biologic composition can comprise, for example, at least one isolated nucleic acid. The biologic composition can comprise, for example, at least one monoclonal antibody. The biologic composition can comprise, for example, at least one chimeric, altered, or humanized antibody.
[0027] In one particular embodiment, the biologic composition comprises at least one ch14.18 monoclonal antibody, although other antibodies and biologics can be purified by the teaching disclosed herein.
[0028] The biologic composition can comprise, for example, at least one impurity. The impurity can be, for example, an undesirable salt such as Bis-tris. The concentration of the Bis-tris impurity in the biologic composition can be, for example 1 to 100 mM Bis-tris, or 10 to 50 mM Bis-tris, or 20 to 40 mM Bis-tris. The pH can be, for example, 6 to 7, or 6.3 to 6.7, or 6.4 to 6.6.
[0029] Diafiltration with PBS
[0030] In some embodiments, the method described herein comprises diafiltration of at least two, at least three, at least four, at least five, or at least six volume units of the biologic composition into one volume unit of PBS. One of ordinary skill in the art will appreciate the general principles of diafiltration as a technique that is well known in the art. Diafiltration is a dilution process that completely removes, replaces, or lowers the concentration of salts or solvents from solutions containing proteins, peptides, nucleic acids, and other biomolecules. While the process does not always require membrane filters, in certain embodiments diafiltration selectively utilizes permeable porous membrane filters to separate the components of solutions and suspensions based on their molecular size. An ultrafiltration membrane retains molecules that are larger than the pores of the membrane while smaller molecules such as salts, solvents and water, which are 100% permeable, freely pass through the membrane. (Further reference can be made to Pall Life Science, Science and Technical Report, Dialfiltration: A Fast, Efficient Method for Desalting, or Buffer Exchange of Biological Samples, available at http://www.pall.com/pdfs/Laboratory/02.0629_Buffer_Exchange_STR.pdf, which is incorporated in its entirety by reference.) Another reference to diafiltration may be found at Schwartz et al., Diafiltration for Desalting or Buffer Exchange, BioProcess International, May 2003, p. 43-49, which is incorporated herein by reference. Further reference to diafiltration may be found in U.S. Pat. No. 6,423,231 (Non-isosmotic diafiltration system), U.S. Pat. No. 6,406,631 (Two stage diafiltration method and apparatus), U.S. Pat. No. 5,225,194 (Aqueous diafiltration process for preparing acellular vaccines, against selected bacterial diseases), U.S. Pat. No. 4,728,430 (Diafiltration method), and 4,436,626 (Capillary diaphragms for use in diafiltration), each of which is incorporated herein by reference.
[0031] In some embodiments, the biologic composition comprises undesirable Bis-tris, and the method described herein comprises removing at least 30%, at least 50%, at least 70%, at least 90%, or at least 95% of the Bis-tris from the biologic composition by means of PBS diafiltration.
[0032] The concentration of the PBS can be, for example, 10 to 50 mM Sodium Phosphate, and 100 to 200 mM NaCl.
[0033] In some embodiments, prior to being diafiltered with PBS, the biologic composition is concentrated first.
[0034] In some embodiments, after the PBS diafiltration, the biological composition is diafiltered into a formulation comprising 20 mM histidine, 150 mM NaCl, and 0.05% Tween 20 saline (HBS).
[0035] Isolation of Monoclonal Antibody
[0036] In several embodiments described herein, the method also comprises isolating and purifying the monoclonal antibody before the PBS diafiltration. The monoclonal antibody can be isolated and purified by, for example, at least one chromatography column. The monoclonal antibody can be isolated and purified by, for example, at least one affinity chromatography column, at least one cation exchange chromatography column, and/or at least one anion exchange chromatography column. The anion exchange chromatography column can be, for example, a Capto adhere column. In some embodiments, the chromatography step can include passing the sample through a Superdex (e.g., Superdex 200) size-exclusion chromatography column, followed optionally by passing the composition through a Q Sepharose anion exchange column or resin. In an alternative embodiment, the Superdex and Sepharose columns can be replaced with a Capto adhere column. While specific embodiments are exemplified above, one of ordinary skill in the art may conduct the chromatography step or steps with any suitable chromatography system (e.g., anion, cation, size-exchange, Capto adhere) or combination of systems (e.g., Superdex and Sepharose) in accordance with ordinary skill and knowledge in the art.
[0037] Capto adhere column is known in the art and a commercially available from GE Healthcare Life Sciences. It is a multimodal medium for intermediate purification and polishing of monoclonal antibodies after capture on Protein A medium by packed bed chromatography. Some embodiments described herein comprises purifying a monoclonal antibody using Capto adhere column, wherein the monoclonal antibody is eluted with a composition comprising Bis-tris buffer. The eluted antibody formulation must then be diafiltered into a formulation comprising PBS, as discussed above, and optionally further diafiltered into a formulation comprising HBS.
[0038] The methods described herein can further comprise, for example, concentrating the biologic composition comprising harvested monoclonal antibody.
[0039] The methods described herein can further comprise, for example, diafiltering the biologic composition into Protein A equilibration buffer. In a particular aspect, the Protein A equilibration buffer comprises 25 to 100 mM Sodium Phosphate, 0.5 to 2.0 M NaCl, with pH 7.0 to 8.0.
[0040] The methods described herein can further comprise, for example, passing the biologic composition through an affinity chromatography column, such as a Protein A affinity column.
[0041] The methods described herein can further comprise, for example, viral inactivation by lowering the PH of the biologic composition.
[0042] The methods described herein can further comprise, for example, viral inactivation by washing the biologic composition with a solvent-detergent. In a particular aspect, the solvent-detergent comprises 10 to 25% Polysorbate (TWEEN), 5 to 10% Tributyl Phosphate.
[0043] The methods described herein can further comprise, for example, washing the biologic composition to remove any solvent-detergent.
[0044] The methods described herein can further comprise, for example, diafiltering the biologic composition into 50HS equilibration buffer. In a particular aspect, the 50HS equilibration buffer comprises 5 to 20 mM Citrate, 5 to 30 mM Phosphate, 15 to 100 mM Sodium Chloride, with pH 4.0 to 5.5.
[0045] The methods described herein can further comprise, for example, passing the biologic composition through a cation exchange affinity chromatography column such as a 50HS column.
[0046] The methods described herein can further comprise, for example, subjecting the biologic composition to nano-filtration.
[0047] The methods described herein can further comprise, for example, passing the biologic composition through an anion exchange affinity chromatography column, such as a Capto adhere column before the PBS diafiltration. The monoclonal antibody can be eluted from the Capto adhere column using a Bis-tris buffer.
[0048] The methods described herein can further comprise, for example, diafiltering the biologic composition into a histidine buffer after the PBS diafiltration.
[0049] In one embodiment, the methods described herein comprises the following steps: [0050] (a) passing a first composition comprising the monoclonal antibody through an affinity chromatography column to obtain a second composition comprising the monoclonal antibody; [0051] (b) lowering the pH of the second composition to obtain a third composition; [0052] (c) washing the third composition with a solvent-detergent to obtained a fourth composition; [0053] (d) washing the fourth composition to remove the solvent-detergent to obtain a fifth composition; [0054] (e) passing the fifth composition through a cation exchange chromatography column to obtain a sixth composition comprising the monoclonal antibody; [0055] (f) subjecting the sixth composition to nano-filtration to obtain a seventh composition; [0056] (g) passing the seventh composition through an anion exchange chromatography column to obtain an eighth composition comprising the monoclonal antibody and Bis-tris; and [0057] (h) diafiltering the eighth composition into a composition comprising PBS to obtain a ninth composition comprising the monoclonal antibody but substantially free from Bis-tris.
[0058] WORKING EXAMPLES
Example 1
Development of Weak Cation Exchange HPLC Assay
[0059] In the development of the ch14.18 purification process, an objective was to improve the purification process which was initially developed by the National Cancer Institute (NCI) (see
[0060] For the last chromatography purification step (see Section 18 of
[0061] At the same time that the purification of ch14.18 was being revised, quality indicating assays were also being developed. One of these was a weak cation exchange chromatography HPLC assay. For this, the TSKGEL CM-3SW column from TOSOH was used to assess the purity of ch14.18. For this analysis, the antibody bound to the column and eluted the column as a salt gradient was run through the column. The column was equilibrated in a low salt sodium phosphate buffer (buffer A) and the gradient was generated with an increased concentration of sodium phosphate/sodium perchlorate buffer (Buffer B). With this separation method the column effluent was monitored at 215 nm and the ch14.18 peak eluted from the column at approximately 15-19 minutes after injection. The retention time for ch14.18 varied as the method and gradient were being optimized. During the development of the assay, various samples of ch14.18 were tested and in some of them a fairly large peak, having a retention time of 7.5 minutes was observed. In trying to identify this contaminant, samples of ch14.18 were spiked with contaminants that are added early in the manufacturing process (see
[0062] Through tracing the source of the samples and which step in the purification process the sample was derived from, it was noted that the peak at issue was only seen after Capto adhere chromatography, which was the final polishing step in the purification process. It was suspected that the contaminant was some trace contaminant, such as host cell protein from the cell culture process that was co-purifying and concentrating on the column. Samples from mock runs on a Capto adhere column which had been loaded on a used column or a new column were evaluated by weak cation exchange chromatography HPLC (see
[0063] By tracking the origin of the samples of ch14.18 which contained the samples and those that did not, it became apparent that the contaminant was Bis-tris which is the buffer salt used for the Capto adhere purification step (see
[0064] Having identified the contaminant, investigated next was the reason that some of the purified ch14.18 samples, which had been through the entire purification process, contained the Bis-tris peak, whereas others did not. Also being developed is a final antibody formulation in 20 mM histidine, 150 mM NaCl, 0.05% Tween 20 saline (HBS), which was transitioned from a formulation in phosphate buffered saline (PBS) used by NCI. It was noted that if the Capto adhere product pool containing ch14.18 was diafiltered directly into the HBS buffer, the Bis-tris peak did not diafilter out of the retentate pool. However, if this pool was first diafiltered into phosphate buffered saline and then into the HBS buffer, the Bis-tris was completely removed from the solution.
[0065] In conclusion, the Capto adhere column is commonly used in the biotechnology industry for the purification of monoclonal antibodies. It has utility for the removal of trace contaminants such as residual Protein A ligand, residual host cell DNA, residual host cell proteins, antibody aggregates, and viruses. Diafiltration with PBS was proved to be an effective way to remove the Bis-tris impurities prior to the final formulation of a monoclonal antibody such as ch14.18.
Example 2
Process Flow Chart
[0066] A Process Flow Chart is provided in
[0067] Section 8. Initial pooling and filtration of harvest of the monoclonal antibody (e.g., crude harvest).
[0068] Section 9. Passing the harvests of Section 8 through an affinity chromatography column (e.g., a Protein A chromatography column) to obtain a second composition comprising the monoclonal antibody.
[0069] Section 10. Inactivating viruses by lowering the pH of the second composition to obtain a third composition. The third composition is then washed with a solvent-detergent to obtained a fourth composition, which is then washed again to remove the solvent-detergent to obtain a fifth composition.
[0070] Section 11. Passing the fifth composition through a cation exchange chromatography column (e.g., SP Sepharose FF Chromatography) to obtain a sixth composition comprising the monoclonal antibody. The Protein A chromatography can be repeated (Section 12), followed by a repeating of the viral inactivation (Section 13), followed by a repeating of the cation exchange chromatography (e.g., Sepharose) (Section 14). The Sepharose runs are then pooled to form the sixth composition.
[0071] Section 16. Subjecting the sixth composition to nano-filtration to further remove viruses to obtain a seventh composition.
[0072] Section 17Concentration of the seventh composition by diafiltration (e.g., using the diafiltration apparatus of
[0073] Section 19. Concentration and Final Filtration. The eighth composition is then subjected to concentration and final filtration, including diafiltration into a composition comprising PBS, to obtain a ninth composition comprising the monoclonal antibody. It is noted that the diafiltration system of
Additional Embodiments
[0074] Embodiment 1A method for purifying a biologic composition, comprising diafiltering the biologic composition with phosphate buffered saline (PBS) to obtain a purified composition.
[0075] Embodiment 2The method of embodiment 1, wherein the biologic composition comprises at least one isolated protein.
[0076] Embodiment 3The method of any of embodiments 1 to 2, wherein the biologic composition comprises at least one isolated monoclonal antibody such as ch14.18.
[0077] Embodiment 4The method of any of embodiments 1 to 3, wherein the biologic composition further comprises at least one impurity such as bis(2-hydroxyethyl)amino-tris(hydroxymethyl)methane (Bis-tris).
[0078] Embodiment 5The method of any of embodiments 1 to 4, wherein the biologic composition further comprises Bis-tris at a concentration of 10 to 50 mM Bis-tris at a pH of 6.3 to 6.7.
[0079] Embodiment 6The method of any of embodiments 1 to 5, wherein the diafiltering removes at least 50%, at least 70%, or at least 90% of the Bis-tris from the biologic composition.
[0080] Embodiment 7The method of any of embodiments 1 to 6, wherein the concentration of the PBS is 10 to 50 mM Sodium Phosphate and 100 to 200 mM NaCl.
[0081] Embodiment 8The method of any of embodiments 1 to 7, wherein the monoclonal antibody is concentrated to a concentration of at least 2.0 to 5.0 AU, before being diafiltered into the composition comprising PBS.
[0082] Embodiment 9The method of any of embodiments 1 to 8, comprising isolating and purifying the monoclonal antibody using at least one chromatography column.
[0083] Embodiment 10The method of any of embodiments 1 to 9, comprising isolating and purifying the monoclonal antibody using at least one affinity chromatography column, at least one cation exchange chromatography column, and/or at least one anion exchange chromatography column such as Capto adhere column.
[0084] Embodiment 11The method of any of embodiments 1 to 10, wherein the monoclonal antibody is eluted from the Capto adhere column using a composition comprising Bis-tris before being diafiltered with PBS.
[0085] Embodiment 12The method of any of embodiments 1 to 11, wherein at least three volume units, least four volume units, least five volume units, or least six volume units of the biologic composition is diafiltered into one volume unit of the composition comprising PBS.
[0086] Embodiment 13The method of any of embodiments 1 to 12, wherein the purified composition is further diafiltered into a composition comprising histidine.
[0087] Embodiment 14A method for purifying a monoclonal antibody, comprising: (a) passing a first composition comprising the monoclonal antibody through an affinity chromatography column to obtain a second composition comprising the monoclonal antibody; (b) lowering the pH of the second composition to obtain a third composition; (c) washing the third composition with a solvent-detergent to obtained a fourth composition; (d) washing the fourth composition to remove the solvent-detergent to obtain a fifth composition; (e) passing the fifth composition through a cation exchange chromatography column to obtain a sixth composition comprising the monoclonal antibody; (f) subjecting the sixth composition to nano-filtration to obtain a seventh composition; (g) passing the seventh composition through an anion exchange chromatography column to obtain an eighth composition comprising the monoclonal antibody and Bis-tris; and (h) diafiltering the eighth composition into a composition comprising PBS to obtain a ninth composition comprising the monoclonal antibody but substantially free from Bis-tris.