SYSTEMS, METHODS, AND APPARATUSES FOR IMMERSION MEDIA APPLICATION AND LENS CLEANING
20220404602 · 2022-12-22
Inventors
- Xaver VOEGELE (Planegg, DE)
- Andreas ACHTERMANN (Planegg, DE)
- Thierry BOTTARO (Planegg, DE)
- Rainer DAUM (Planegg, DE)
Cpc classification
G02B21/33
PHYSICS
G02B27/0006
PHYSICS
International classification
Abstract
An imaging system configured for automatic application and/or removal of immersion media can include (i) a sample stage, (ii) an imaging assembly disposed on a first side of the sample stage and having an immersion objective configured to selectively align with an optical axis of the imaging system, and (iii) an applicator positioned to selectively interact with a lens surface of the immersion objective to deposit or remove immersion media.
Claims
1. An imaging system configured for automatic application and/or removal of immersion media, comprising: a sample stage; an imaging assembly disposed on a first side of the sample stage and comprising an immersion objective configured to selectively align with an optical axis of the imaging system; and an applicator positioned to selectively interact with a lens surface of the immersion objective to deposit or remove immersion media.
2. The imaging system of claim 1, wherein the applicator comprises an immersion media nozzle configured to dispense immersion media without bubbles.
3. (canceled)
4. The imaging system of claim 2, further comprising a bubble sensor configured to detect a presence of a bubble at the immersion media nozzle or within an upstream line feeding immersion media to the immersion media nozzle.
5. The imaging system of claim 2, wherein the applicator comprises a liquid sensor for detecting a presence of immersion media at the immersion media nozzle, the liquid sensor comprising a resistance sensor or a capacitance sensor.
6. The imaging system of claim 5, wherein the liquid sensor comprises an optical sensor or a multimeter for measuring resistance at the nozzle.
7. (canceled)
8. The imaging system of claim 1, further comprising a hose joining the applicator to an immersion media reservoir and a pump associated with the hose and configured to dispense immersion media from the immersion media reservoir and through the applicator.
9. (canceled)
10. The imaging system of claim 8, wherein the pump is configured to dispense a desired volume of immersion media based on an operating time and/or a number of operating cycles.
11. The imaging system of claim 1, wherein the applicator is disposed on the first side of the sample stage.
12. The imaging system of claim 11, wherein the applicator is integrated into and co-translational with the sample stage.
13. The imaging system of claim 12, wherein the sample stage is a motorized xy-stage and configured to position the applicator adjacent to the lens surface of the immersion objective such that dispensing immersion media from the applicator causes immersion media to be deposited onto the lens surface of the immersion objective.
14. The imaging system of claim 1, wherein the imaging system comprises an inverted microscope with the imaging assembly being positioned below the sample stage and the first side of the sample stage being a bottom of the sample stage such that the applicator is disposed on the bottom of the sample stage directionally toward the immersion objective.
15. The imaging system of claim 1, wherein the imaging system comprises an upright microscope with the imaging assembly being positioned above the sample stage and the first side of the sample stage being a top of the sample stage such that the applicator is disposed on the top of the sample stage directionally toward the immersion objective.
16. The imaging system of claim 1, comprising a wipe configured to clean and/or remove immersion media from the lens surface of the immersion objective, the wipe containing a cleaning agent.
17-20. (canceled)
21. The imaging system of claim 16, further comprising a computing system configured to generate a map of the wipe, to track portions of the wipe previously used to clean the immersion objective, and to direct movement of the wipe on a subsequent cleaning operation to interact with the immersion objective at a clean or unused area of the wipe.
22. The imaging system of claim 1, wherein the applicator comprises a suction device configured to remove immersion media from the lens surface of the immersion objective.
23. The imaging system of claim 1, wherein the applicator is disposed at a stationary position within a housing of the imaging system.
24-31. (canceled)
32. A method for automatically applying immersion media to an immersion objective, comprising: providing an imaging system that includes a sample stage, an imaging assembly disposed on a first side of the sample stage and comprising an immersion objective configured to selectively align with an optical axis of the imaging system, and an applicator positioned to selectively interact with a lens surface of the immersion objective to deposit or remove immersion media; positioning the sample stage relative to the immersion objective such that the applicator is adjacent to the lens surface of the immersion objective; and dispensing immersion media from the applicator onto the lens surface of the immersion objective.
33-36. (canceled)
37. The method of claim 32, further comprising returning the sample stage to a viewing position after dispensing the immersion media from the applicator onto the lens surface.
38. The method of claim 37, further comprising positioning the sample stage relative to the immersion objective such that the applicator is adjacent to the lens surface of the immersion objective; and removing immersion media from the lens surface of the immersion objective via the applicator.
39. A kit for automatedly dispensing immersion media, comprising: an immersion media reservoir configured to hold a volume of immersion media; a nozzle fluidically coupled to the immersion media reservoir by an immersion media hose; and a micropump operable to move immersion media from the immersion media reservoir, through the immersion media hose, and to the nozzle for dispensing.
40-45. (canceled)
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0026] In order to describe the manner in which the above recited and other advantages and features of the disclosure can be obtained, a more particular description of the disclosure briefly described above will be rendered by reference to specific embodiments thereof, which are illustrated in the appended drawings. It is appreciated that these drawings depict only typical embodiments of the disclosure and are not therefore to be considered limiting of its scope. The disclosure will be described and explained with additional specificity and detail through the accompanying drawings in which:
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DETAILED DESCRIPTION
[0042] Before describing various embodiments of the present disclosure in detail, it is to be understood that this disclosure is not limited to the parameters of the particularly exemplified systems, methods, apparatus, products, and/or processes, which may, of course, vary. Thus, while certain embodiments of the present disclosure will be described in detail, with reference to specific configurations, parameters, components, elements, etc., the descriptions are illustrative and are not to be construed as limiting the scope of the claimed invention. In addition, the terminology used herein is for the purpose of describing the embodiments and is not necessarily intended to limit the scope of the claimed invention.
[0043] Furthermore, it is understood that for any given component or embodiment described herein, any of the possible candidates or alternatives listed for that component may generally be used individually or in combination with one another, unless implicitly or explicitly understood or stated otherwise. Additionally, it will be understood that any list of such candidates or alternatives is merely illustrative, not limiting, unless implicitly or explicitly understood or stated otherwise.
[0044] In addition, unless otherwise indicated, numbers expressing quantities, constituents, distances, or other measurements used in the specification and claims are to be understood as being modified by the term “about,” as that term is defined herein. Accordingly, unless indicated to the contrary, the numerical parameters set forth in the specification and attached claims are approximations that may vary depending upon the desired properties sought to be obtained by the subject matter presented herein. At the very least, and not as an attempt to limit the application of the doctrine of equivalents to the scope of the claims, each numerical parameter should at least be construed in light of the number of reported significant digits and by applying ordinary rounding techniques. Notwithstanding that the numerical ranges and parameters setting forth the broad scope of the subject matter presented herein are approximations, the numerical values set forth in the specific examples are reported as precisely as possible. Any numerical values, however, inherently contain certain errors necessarily resulting from the standard deviation found in their respective testing measurements.
[0045] Any headings and subheadings used herein are for organizational purposes only and are not meant to be used to limit the scope of the description or the claims.
Overview of Imaging Systems and Methods
[0046]
[0047] For example, when viewing samples with the immersion objectives of an upright or inverted light microscope, it is beneficial for the desired focal plane of the sample to be viewed directly through the immersion media without intervening air space and/or by minimizing the different types of materials the light passes through before being received within the optical train of the microscope. As such, samples within microwell plates are typically best viewed/imaged using an inverted light microscope, whereas a cross-sectional tissue samples on a glass slide with a coverslip is perhaps better viewed with an upright light microscope.
[0048] Regardless of the sample type or viewing angle, upright and inverted microscopes are joined by the common thread that use of immersion objectives with these platforms has traditionally required manual application of the immersion media to the objective. For example, when applying immersion media to an objective of an inverted light microscope (e.g., the inverted light microscope 20 of
[0049] As exemplified in the foregoing, manually applying immersion media to view a single sample is a time intensive process and is benefitted by open access to the objective turret. In an automated imaging system, each sample can be imaged at multiple, different levels of resolution, which may necessitate reiterated changes between a plurality of objective lenses during the imaging process. If, for example, such an imaging process called for two different immersion objectives to be used in series, current systems lack an efficient and effective solution for applying and/or maintaining a proper volume of immersion media on each immersion objective between rotations. Further, continued or over application of immersion media can cause the objective lenses to become gunky and/or may negatively impact the consistency and quality of acquired images. Current systems further lack the ability to automatedly remove and/or clean immersion media from objective lenses.
[0050] Embodiments of the present disclosure beneficially provide systems and methods for automatedly applying and cleaning immersion media from objective lenses and have particular benefits when applied to automated imaging systems. For example, in some embodiments disclosed herein, an immersion media applicator is integrated within the sample stage of an automated system Immersion media can be applied to the desired objective by moving the sample stage over the desired immersion objective such that the outlet nozzle of the applicator is oriented above the lens surface where it can discharge a discrete volume of immersion media thereon. When integrated into the sample stage itself, little—if any—additional space is needed within the stage assembly area to implement the applicator. The reservoir of immersion media associated with the nozzle can be housed outside of the sample stage assembly area and drawn thereto via a flexible hose. In this way, embodiments of the present disclosure beneficially allow for the retrofitting of most any automated imaging system without impacting the function or mobility of existing components and can beneficially reduce the mechanical complexity (and associated cost) associated with prior systems that require additional motors or flip mounts to move a nozzle on top of the objective lens. Additionally, embodiments of the present disclosure beneficially allow for the application of immersion media to any objective within an automated imaging system that can be used for imaging samples held by the sample stage, regardless of whether the objectives are held by a turret or objective lens slider.
[0051] In some embodiments of the present disclosure, the immersion media applicator consists of a static hose and nozzle extending into the stage assembly area of an automated imaging system. Instead of positioning the sample stage over a stationary objective lens for immersion media application, the objective lenses are moved to the applicator (e.g., via an objective lens slider) where immersion media can be applied directly to the desired objective. Upon automatedly receiving the immersion media, the objective lens can be repositioned at the sample for high resolution imaging. Additional features and benefits of the disclosed systems are provided herein with reference to embodiments disclosed in the accompanying drawings.
[0052] For example,
[0053] As shown in
[0054] As a general working example, a sample-containing multiwell plate can be positioned within the stage housing 106 such that a desired sample well is optically aligned with the optical train of the associated light microscope assembly 104, including a desired objective lens. The objective lens can be switched to a lower or higher resolution objective (e.g., by rotating an associated turret or repositioning the objective lenses via an objective lens slider) and the sample illuminated via a white light source.
[0055] As another example, a fluorophore excitation source can be automatically or manually directed to provide multiple bandwidths of light ranging from violet (e.g., 380 nm) to near infrared (e.g., at least 700 nm) and are designed to excite fluorophores, such as, for example, cyan fluorescent protein (CFP) and Far Red (i.e., near-IR) fluorophores. Example bandwidths with appropriate excitation filters (e.g., as selected via a computing device 110 driven excitation filter wheel) can include, but are not limited to, Violet (e.g., 380-410 nm LED & 386/23 nm excitation filter), Blue (e.g., 420-455 nm LED & 438/24 nm excitation filter), Cyan (e.g., 460-490 nm LED & 485/20 nm excitation filter), Green (e.g., 535-600 nm LED & 549/15 nm excitation filter), Green (e.g., 535-600 nm LED & 560/25 nm excitation filter), Red (e.g., 620-750 nm LED & 650/13 nm excitation filter), and Near-IR (e.g., 700 nm-IR LED & 740/13 nm excitation filter). The two Green/excitation filter combinations listed above can be provided optionally via, for example, a mechanical flipper, when desiring to improve the brightness of red and scarlet dyes. Of course, other LED bandwidths can also be used, replaced, or complemented with a laser emitting any of the desired excitation bandwidths and/or wavelengths.
[0056] Additionally, or alternatively, the stage housing 106 can include a stage assembly and positioning mechanism configured to retain and selectively move sample for viewing by the objective lens aligned with the remaining portions of the optical train within light microscope assembly 104. As it should be appreciated, the stage assembly can be configured to move within any of three-dimensions, as known in the art. For example, the stage assembly can be configured to move laterally (e.g., in an x, y-plane parallel to the surface of the associated objective lens) to position different portions of the sample within the field of view. The stage assembly can additionally, or alternatively, be configured to move in a z-direction (e.g., between parallel xy-planes that are each disposed at different distances from the surface of the objective lenses) using any mechanism known in the art, such as, for example, a stepper motor and screw/nut combination providing stepwise movements of the sample toward/away from the objective lenses.
[0057] The stage assembly can be moved to position the desired sample within the focal plane of the light microscope assembly 104 and upon capturing image data at the light microscope assembly 104, the data can be viewed, analyzed, and/or stored within an associated computing device 110. Embodiments disclosed or envisioned herein may comprise or utilize a special purpose or general-purpose computer including computer hardware, such as, for example, one or more processors, as discussed in greater detail below. Embodiments may also include physical and other computer-readable media for carrying or storing computer-executable instructions and/or data structures. Such computer-readable media can be any available media that can be accessed by a general purpose or special purpose computer system. Computer-readable media that store computer-executable instructions are physical storage media. Computer-readable media that carry computer-executable instructions are transmission media. Thus, by way of example, and not limitation, embodiments can comprise at least two distinctly different kinds of computer-readable media: computer storage media and transmission media.
[0058] Computer storage media includes RAM, ROM, EEPROM, CD-ROM or other optical disk storage, magnetic disk storage or other magnetic storage devices, or any other medium which can be used to store desired program code means in the form of computer-executable instructions or data structures and which can be accessed by a general purpose or special purpose computer. A “network” is defined as one or more data links that enable the transport of electronic data between computer systems and/or modules and/or other electronic devices. When information is transferred or provided over a network or another communications connection (either hardwired, wireless, or a combination of hardwired and wireless) to a computer, the computer properly views the connection as a transmission medium. Transmission media can include a network and/or data links which can be used to carry data or desired program code means in the form of computer-executable instructions or data structures and which can be accessed by a general purpose or special purpose computer. Combinations of the above should also be included within the scope of computer-readable media.
[0059] Further, upon reaching various computer system components, program code means in the form of computer-executable instructions or data structures can be transferred automatically from transmission media to computer storage media (or vice versa). For example, computer-executable instructions or data structures received over a network or data link can be buffered in RAM within a network interface module (e.g., an “NIC”), and then eventually transferred to computer system RAM and/or to less volatile computer storage media at a computer system. Thus, it should be understood that computer storage media can be included in computer system components that also (or even primarily) utilize transmission media.
[0060] Computer-executable instructions comprise, for example, instructions and data which cause a general-purpose computer, special purpose computer, or special purpose processing device to perform a certain function or group of functions. The computer executable instructions may be, for example, binaries, intermediate format instructions such as assembly language, or even source code. Although the subject matter has been described in language specific to structural features and/or methodological acts, it is to be understood that the subject matter defined in the appended claims is not necessarily limited to the described features or acts described above. Rather, the described features and acts are disclosed as example forms of implementing the claims.
[0061] Those skilled in the art will appreciate that embodiments may be practiced in network computing environments with many types of computer system configurations, including, personal computers, desktop computers, laptop computers, message processors, hand-held devices, multi-processor systems, microprocessor-based or programmable consumer electronics, network PCs, minicomputers, mainframe computers, tablets, smart phones, routers, switches, and the like. Embodiments may be practiced in distributed system environments where local and remote computer systems, which are linked (either by hardwired data links, wireless data links, or by a combination of hardwired and wireless data links) through a network, both perform tasks. In a distributed system environment, program modules may be located in both local and remote memory storage devices. Program modules for one entity can be located and/or run in another entities data center or “in the cloud.”
[0062] With continued reference to the system 100 of
[0063] System 100 can also include a user display device 112 to display results and/or system configurations. Light microscope assembly 104 and/or computing device 110 can communicate, either directly or indirectly, with user display device 112 to program and/or control the automated imaging method, which can include, for example, the automated application of immersion media to an appropriate immersion objective prior to and/or during the imaging method.
[0064] In one embodiment, one or more of the method steps described herein are performed as a software application. However, embodiments are not limited to this and method steps can also be performed in firmware, hardware or a combination of firmware, hardware and/or software. Furthermore, the steps of the methods can exist wholly or in part on the light microscope assembly 104, computing device 110, and/or other computing devices.
[0065] An operating environment for the devices of the system may comprise or utilize a processing system having one or more microprocessors and system memory. In accordance with the practices of persons skilled in the art of computer programming, embodiments are described below with reference to acts and symbolic representations of operations or instructions that are performed by the processing system, unless indicated otherwise. Such acts and operations or instructions are referred to as being “computer-executed,” “CPU-executed,” or “processor-executed.”
[0066] Various embodiments disclosed herein are related to apparatuses, methods, and systems for immersion media application and lens cleaning. Such embodiments beneficially improve microscopy systems by enabling the automated application of immersion media to an objective lens before and/or during automated imaging runs. Such embodiments can additionally, or alternatively, provide an automated lens cleaning system that can beneficially remove immersion media and/or clean objective lenses at any point prior to, during, and/or following sample imaging where immersion media is used, thereby increasing the consistency and/or quality of images obtained by the associated imaging system and decreasing the likelihood of possible damage to the objective lens caused by extended or repeated exposure to immersion media when the affected objective lens is not in use. Various embodiments can also be easily incorporated into existing imaging systems (e.g., at the original equipment manufacturer and/or as a retrofit to already manufactured imaging systems) without substantially hindering the movement and/or operation of components within the system, and the beneficially small footprint of the disclosed immersion media applicators and disclosed lens cleaners—in addition to the position and operation of the same within imaging systems—enables an expanded utilization of objective lenses and imaging modalities.
[0067] Additionally, embodiments disclosed herein can increase the efficiency and ease by which immersion media is applied and cleaned from objective lenses housed within automated imaging systems that may be difficult or time consuming to access. As a result, embodiments disclosed herein provide researchers and other imaging system operators with additional flexibility when planning or implementing an automated (e.g., high throughput) image capture process. For example, immersion media applicators disclosed herein can be configured to apply immersion media to any number (e.g., some or all) of objective lenses easily and while maintaining or returning to a desired field of view with great precision and accuracy. Embodiments disclosed herein can also beneficially reduce focus drift as the immersion media is positioned within the same incubator/controlled environment as the objective lenses prior to its application.
[0068] Image capture events over an extended duration (e.g., multiple hours or days long) can also be implemented with less time spent maintaining the immersion media interface between the objective lens and the sample and can beneficially enable the application and/or cleaning of immersion media on multiple objective lenses throughout the extended duration image capture event with a reduced amount or duration of imaging interruptions.
Exemplary Immersion Media Applicators and Systems
[0069] Referring now to
[0070] Stage housing 106 includes a stage assembly 114 mounted in a manner so as to optically and mechanically cooperate with components that make up microscope assembly 104. Stage assembly 114 generally includes a stage 116 on which sample 108 can be positioned, and can include a stage positioning mechanism for selectively moving the stage in an xy-plane for viewing samples positioned thereon, as is known in the art. In some embodiments, the stage housing is the stage assembly. Accordingly, as used herein, the “stage housing” is intended to include a microscope sample stage for holding and/or positioning samples to be imaged. This term can also be used to describe additional features associated with the stage, including, for example, elements for controlling environmental conditions around the sample, such as any one or more of a heating element, cooling element, fan, gas sensor/inlet (e.g., oxygen, carbon dioxide, etc.), vacuum, compressor, or other element or physical housing associated with or coupled to the sample stage.
[0071] In the depicted embodiment, microscope assembly 104 houses an inverted microscope that can be used to perform screening of specimens on specimen sample plate 108b from underneath the sample. The microscope includes an objective assembly 118 comprising a plurality of objectives, as is known in the art, to obtain magnified views of the sample. In one embodiment, one or more standard objectives are included with one or more immersion objectives. Example standard objectives include 2×/0.08 NA, 4×/0.16 NA, 10×/0.4 NA, 20×/0.45 NA, 20×/0.7 NA, and 40x/0.6 NA objectives. Any one or more of the foregoing standard objectives can be included on a turret or lens slider with any one or more of the following immersion objectives: 40×/1.3 NA, 50×/0.95 NA, 60×/1.25 NA, 100×/1.25 NA, 100×/1.28 NA, 100×/1.3 NA, and 100×/1.4 NA objectives. It should be appreciated that any number or combination of objectives (including other magnification levels and objective types known in the art) can also be used within embodiments of the present disclosure according to operator preference and/or application.
[0072] The microscope also includes a focus drive mechanism 120 mechanically coupled to microscope objective assembly 118. Objective assembly 118 can be moved up and down with respect to stage assembly 114 via focus drive mechanism 120 so as to align and focus any of the objectives of microscope objective assembly 118 on the biological cells disposed within specimen sample plate 108b. Focus drive mechanism 120 can be an auto focus mechanism, although that is not required. Focus drive mechanism 120 can be configured with a stepper motor and screw/nut combination that reduces anti-backlash to provide a resolution of, e.g., down to 0.006-μm/microstep to support the microscope objectives configured in imaging system 102.
[0073] The stage assembly 114 additionally includes an immersion media applicator 122 associated with the stage 116 for applying immersion media to objectives in the objective assembly 118. As an example embodiment to illustrate the objective workings of imaging system 102, objective assembly 118 can be configured in a custom-made fashion to provide a number of positions that enable interrogation of cells organized within sample plate 108b. Focus drive mechanism 120 can rapidly and reliably switch between the objectives in an automated fashion. When on a turret, the objectives in such an arrangement can be positioned, but not necessarily, at 60-degrees apart, which can enable the primary objective to focus on sample plate 108b without the other objectives interfering with the stage, sample plate 108b, or other components within imaging system 102.
[0074] To change the objective, focus drive mechanism 120 can drop below stage assembly 114, rotate to the next objective position and then push the objective up to a proper focusing height. To provide enhanced system safety, a mechanical limit switch can be used to home the turret, while one or more optical switches can be used to confirm that the position of the objective has been properly switched. In addition, each optical position can be held in place with an accurately machined mechanical detent on the rotating turret.
[0075] When switching to an immersion objective requiring application of immersion media prior to imaging, the focus drive mechanism 120 can drop the objective below the stage, the stage assembly can position the applicator 122 over the objective lens and apply a predetermined volume of immersion media to the immersion objective, and the stage assembly can reposition the sample 108 relative to the objective assembly 118 at the viewing position prior to application of the immersion media. The focus drive mechanism 120 can then position the immersion objective at the proper focusing height for imaging.
[0076] The microscope assembly 104 also includes various known components for generating and/or recording images of the samples. These components can include, but are not limited to, an image sensor 124 (e.g., a monochrome CCD or CMOS camera or sensor), a light source 126 (e.g., a light engine comprising multiple LEDs), optical filters that filter the excitation and emission lights (e.g., a multi-position dichroic filter wheel 128 and a multi-position emission filter wheel 130), and light directing devices that direct light through the microscope assembly (e.g., tube lens 132 and fold mirror 134). One or more of the above components are typically controlled by the computing device 110 to allow for automated imaging.
[0077] The microscope assembly 104 allows for epi-illumination (or reflected) light microscopy as well as transillumination light microscopy. In epi-illumination, light (e.g., white light) generated by the light source 126 is projected through the optical assembly along light path 136 where it is focused on and illuminates the sample 108. The reflected light is received at the objective lens and returned to the image sensor 124 along the reflected light path 138. Alternatively, transmitted white light can be generated by a transmission light assembly 140 for brightfield imaging. Light generated by the transmission light assembly 140 is passed through the sample and received at the objective lens of the microscope assembly 104. The light travels through the assembly 104 along light path 138 until received at the image sensor 124.
[0078] Although the discussion herein is geared toward the use of an inverted microscope configuration, it is to be appreciated that an upright microscope configuration can alternatively be used to perform screening from above the sample.
[0079] Immersion media applicators can be implemented in various ways. For example,
[0080] Accordingly, the applicator assembly 200 can be configured to dispense immersion media without bubbles. In some embodiments, the applicator assembly includes a sensor 212 at a distal end of the assembly 200. The sensor 212 can be a bubble sensor for detecting the presence of a bubble at the immersion media nozzle 202 or within the upstream hose 206 feeding immersion media to the nozzle 202. Additionally, or alternatively, the sensor 212 can be a liquid sensor for detecting the presence of immersion media at the nozzle 202. For example, the sensor 212 can be any of a capacitor sensor, an optical sensor, or multimeter that measures resistance at the dispensing tip of the nozzle 202. In operation, the sensor 212 can first register whether there is liquid at the nozzle 202. If present, the pump 208 can be activated for the predetermined number of cycles and/or period of time to deliver a known volume of immersion media (e.g., based on the pump type, diameter of the nozzle and hose, and type/viscosity of immersion media being dispensed). Alternatively, if the sensor 212 does not register liquid at the nozzle 202, the pump 208 can be activated until the sensor 212 indicates that liquid is present. As above, once the sensor 212 registers liquid at the nozzle 202, the pump 208 can be activated for the requisite time and/or number of cycles to dispense the desired volume of immersion media.
[0081] In some embodiments, pumping immersion media through the hose until the sensor registers liquid can be performed with the nozzle positioned over a waste reservoir 214, thereby preventing any immersion media from being accidentally discharged into the interior of the microscope assembly. Similarly, in embodiments where the applicator assembly includes a bubble sensor, the system can be operable to clear the line into a waste reservoir 214 to ensure a bubble-free line.
[0082] With continued reference to
[0083] Similarly, the waste reservoir 214 can be associated with a level detector 215b operable to monitor and/or identify when a volume of waste within the waste reservoir 214 has met or exceeded a predetermined upper threshold. The level detector 215b can alert the user and/or associated computing system that the waste reservoir is “full” and requires voiding of the liquid contents, and in some embodiments, the applicator may be prevented from dispensing immersion media into the waste reservoir until the level detector 215b indicates that the volume of immersion media within the waste reservoir 214 has fallen below the upper threshold. This can beneficially prevent overflow of immersion media from the waste reservoir 214, which can beneficially protect components from potentially damage from exposure to immersion media.
[0084] It should be appreciated that the applicator assembly can be provided with software or other set of computer executable instructions for configuring a computing system to operate and/or communicate with the liquid sensor, level detector(s), nozzle, valve, and/or pump. In this way, the applicator assembly can be incorporated with an automated imaging system and thereby allow proper application of immersion media to the desired objective lenses. In some embodiments, the applicator assembly can, itself, include the requisite operability for communicating with and between the discrete components of the assembly to enable any and/or all of the functions and operations of the assembly (or any of its individual components), as disclosed herein.
[0085] In some embodiments, the applicator assembly is stationary within the associated automated imaging assembly. For example, the nozzle 202 of the applicator assembly 200 can be positioned along the path of an objective slider 216 (e.g., as shown by arrow A in
[0086] With continued reference to
[0087] While having a fixed nozzle location can beneficially reduce the risk of binding or breaking a tractable hose, the relocation precision of a moved objective lens is often worse than the relocation precision of a moved sample stage, causing an unintended shift in the image field of view. Accordingly, in some embodiments, the nozzle and hose can be incorporated into the sample stage itself.
[0088] For example, as shown in
[0089] As shown in
[0090] It should be appreciated that the position of the nozzle 302 in
[0091]
[0092] As further illustrate by the embodiment of
[0093] Referring specifically to
[0094] In some embodiments, the objective lenses can be positioned on a turret that can rotate various lenses into the optical light path of the microscope assembly. The objective lenses on the turret can be positioned in the correct focal plane by a focus drive mechanism but can be otherwise stationary with respect to lateral movements (e.g., in the x- and y-directions). In such embodiments, the sample stage can be responsible for positioning the applicator nozzle in the correct xy-coordinate for application of immersion media to the objective lens. It should be appreciated that by limiting the movement of the objective lenses, the relocation precision of the sample field of view can be maximized in comparison to relocation precision when moving the objective lens.
[0095] In some embodiments, one or both of the stage and objectives can translate in the xy-plane to orient the immersion media applicator in a position where immersion media can be dispensed appropriately onto a desired objective lens. For example, as shown in
[0096] Additionally, or alternatively, the objective lenses can be moved with respect to the sample stage to retrieve immersion media and return to the approximate field of view for imaging. For example, as shown in
[0097] It should be appreciated that the foregoing movements of the stage and/or lenses can be implemented in an automated fashion and without physical interaction with the objectives by an operator. As such, embodiments of the present disclosure beneficially enable the automated application of immersion media to one or more objective lenses in an automated imaging system.
[0098] With continued reference to
[0099] It should be further appreciated that although
[0100] One such exemplary system is illustrated in the schematic of
Exemplary Automated Objective Lens Cleaning Systems
[0101] In addition to the foregoing, embodiments of the present disclosure additionally include systems for removing immersion media from objective lenses in an automated imaging system and/or for cleaning objective lenses in an automated imaging system. For example,
[0102] In some embodiments, the topology of the wipe is mapped and tracked by the computing system such that a clean or unused area of the wipe is used to clean each subsequent objective lens. During the cleaning process, the objective lens can be moved in a linear back and forth movement within a single plane or rotationally. In some embodiments, the wipe is associated with a translocation element, such as a solenoid, which provides vibration-like amplitude to the wipe movement. Such movement can be implemented, for example, by vibrating or moving the sample stage.
[0103] Additional cleaning systems are envisioned by the present disclosure. In addition to or alternatively from the wipe disclosed in
[0104] In some embodiments, the applicator and cleaning system can be incorporated into a single and/or cooperative system. For example,
[0105] It should be appreciated that in some embodiments, the nozzle 420 of
Abbreviated List of Defined Terms
[0106] To assist in understanding the scope and content of this written description and the appended claims, a select few terms are defined directly below. Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which the present disclosure pertains.
[0107] The terms “approximately,” “about,” and “substantially,” as used herein, represent an amount or condition close to the specific stated amount or condition that still performs a desired function or achieves a desired result. For example, the terms “approximately,” “about,” and “substantially” may refer to an amount or condition that deviates by less than 10%, or by less than 5%, or by less than 1%, or by less than 0.1%, or by less than 0.01% from a specifically stated amount or condition.
[0108] It should be appreciated that the term “immersion media” includes any natural or synthetic media with a high refractive index (e.g., greater than 1.3, preferably greater than 1.5) that is suitable to increase the resolving power (i.e., the numerical aperture) of high-resolution objective lenses. The term “immersion media” is understood to include water or any transparent oil with the desired viscosity and optical characteristics for the given microscopic application.
[0109] As used herein, the term “immersion objective” is intended to include those objectives with a numerical aperture greater than 1 (i.e., the refractive index of air) and which benefit from or require the use of immersion media for optimal performance An “immersion objective” is understood to be synonymous herein with a “high-resolution objective lens” or other objective lens in the disclosed imaging systems that automatedly receives immersion media.
[0110] The term “stage housing,” as used herein, includes a stage and/or stage assembly mounted in a manner to optically and mechanically cooperate with components that make up a microscope assembly. A “stage assembly” can be the stage on which sample can be positioned and can additionally include a stage positioning mechanism for selectively moving the stage in an xy-plane for viewing samples positioned thereon, as is known in the art. As used herein, the term “stage housing” can also be used to describe additional features associated with the stage or stage assembly, including, for example, elements for controlling environmental conditions around the stage and/or mounted sample, such as any one or more of a heating element, cooling element, fan, gas sensor/inlet (e.g., oxygen, carbon dioxide, etc.), vacuum, compressor, or other element or physical housing associated with or coupled to the sample stage.
[0111] Various aspects of the present disclosure, including devices, systems, and methods may be illustrated with reference to one or more embodiments or implementations, which are exemplary in nature. As used herein, the term “exemplary” means “serving as an example, instance, or illustration,” and should not necessarily be construed as preferred or advantageous over other embodiments disclosed herein. In addition, reference to an “implementation” of the present disclosure or invention includes a specific reference to one or more embodiments thereof, and vice versa, and is intended to provide illustrative examples without limiting the scope of the invention, which is indicated by the appended claims rather than by the following description.
[0112] As used in the specification, a word appearing in the singular encompasses its plural counterpart, and a word appearing in the plural encompasses its singular counterpart, unless implicitly or explicitly understood or stated otherwise. Thus, it will be noted that, as used in this specification and the appended claims, the singular forms “a,” “an” and “the” include plural referents unless the context clearly dictates otherwise. For example, reference to a singular referent (e.g., “a widget”) includes one, two, or more referents unless implicitly or explicitly understood or stated otherwise. Similarly, reference to a plurality of referents should be interpreted as comprising a single referent and/or a plurality of referents unless the content and/or context clearly dictate otherwise. For example, reference to referents in the plural form (e.g., “widgets”) does not necessarily require a plurality of such referents. Instead, it will be appreciated that independent of the inferred number of referents, one or more referents are contemplated herein unless stated otherwise.
[0113] As used herein, directional terms, such as “top,” “bottom,” “left,” “right,” “up,” “down,” “upper,” “lower,” “proximal,” “distal,” “adjacent,” and the like are used herein solely to indicate relative directions and are not otherwise intended to limit the scope of the disclosure and/or claimed invention.
Conclusion
[0114] The terms and expressions which have been employed herein are used as terms of description and not of limitation, and there is no intention in the use of such terms and expressions of excluding any equivalents of the features shown and described or portions thereof, but it is recognized that various modifications are possible within the scope of the invention claimed. Thus, it should be understood that although the present invention has been specifically disclosed in part by preferred embodiments, exemplary embodiments, and optional features, modification and variation of the concepts herein disclosed may be resorted to by those skilled in the art, and such modifications and variations are considered to be within the scope of this invention as defined by the appended claims. The specific embodiments provided herein are examples of useful embodiments of the present invention and various alterations and/or modifications of the inventive features illustrated herein, and additional applications of the principles illustrated herein that would occur to one skilled in the relevant art and having possession of this disclosure, can be made to the illustrated embodiments without departing from the spirit and scope of the invention as defined by the claims and are to be considered within the scope of this disclosure.
[0115] It will also be appreciated that systems, devices, products, kits, methods, and/or processes, according to certain embodiments of the present disclosure may include, incorporate, or otherwise comprise properties or features (e.g., components, members, elements, parts, and/or portions) described in other embodiments disclosed and/or described herein. Accordingly, the various features of certain embodiments can be compatible with, combined with, included in, and/or incorporated into other embodiments of the present disclosure. Thus, disclosure of certain features relative to a specific embodiment of the present disclosure should not be construed as limiting application or inclusion of said features to the specific embodiment. Rather, it will be appreciated that other embodiments can also include said features, members, elements, parts, and/or portions without necessarily departing from the scope of the present disclosure.
[0116] Moreover, unless a feature is described as requiring another feature in combination therewith, any feature herein may be combined with any other feature of a same or different embodiment disclosed herein. Furthermore, various well-known aspects of illustrative systems, methods, apparatus, and the like are not described herein in particular detail in order to avoid obscuring aspects of the example embodiments. Such aspects are, however, also contemplated herein.
[0117] All references cited in this application are hereby incorporated in their entireties by reference to the extent that they are not inconsistent with the disclosure in this application. It will be apparent to one of ordinary skill in the art that methods, devices, device elements, materials, procedures, and techniques other than those specifically described herein can be applied to the practice of the invention as broadly disclosed herein without resort to undue experimentation. All art-known functional equivalents of methods, devices, device elements, materials, procedures, and techniques specifically described herein are intended to be encompassed by this invention.
[0118] When a group of materials, compositions, components, or compounds is disclosed herein, it is understood that all individual members of those groups and all subgroups thereof are disclosed separately. When a Markush group or other grouping is used herein, all individual members of the group and all combinations and sub-combinations possible of the group are intended to be individually included in the disclosure. Every formulation or combination of components described or exemplified herein can be used to practice the invention, unless otherwise stated. Whenever a range is given in the specification, for example, a temperature range, a time range, or a composition range, all intermediate ranges and subranges, as well as all individual values included in the ranges given are intended to be included in the disclosure.
[0119] All changes which come within the meaning and range of equivalency of the claims are to be embraced within their scope.