DISACCHARIDE LINKER, DISACCHARIDE-SMALL MOLECULE DRUG CONJUGATE AND SUGAR CHAIN FIXED-POINT ANTIBODY-DRUG CONJUGATE, AND PREPARATION METHOD THEREFOR AND USE THEREOF
20240197900 ยท 2024-06-20
Inventors
- Wei Huang (Shanghai, CN)
- Feng Tang (Shanghai, CN)
- Wei Shi (Shanghai, CN)
- Shang JIAO (Shanghai, CN)
- Siqi WANG (Shanghai, CN)
Cpc classification
A61K47/6889
HUMAN NECESSITIES
A61K47/6883
HUMAN NECESSITIES
C07K2317/41
CHEMISTRY; METALLURGY
C07H15/10
CHEMISTRY; METALLURGY
Y02P20/55
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
C07K16/00
CHEMISTRY; METALLURGY
C07H9/06
CHEMISTRY; METALLURGY
C12N9/2402
CHEMISTRY; METALLURGY
International classification
A61K47/68
HUMAN NECESSITIES
Abstract
The present application relates to a disaccharide linker, a disaccharide-small molecule drug conjugate and a sugar chain fixed-point antibody-drug conjugate, a preparation method and the use thereof. The structure of the disaccharide linker is as shown in the following formula I. The present invention provides a new-type fixed-point and quantitative antibody-drug conjugate form, and the stability and cytotoxicity of the antibody-drug conjugate are improved.
##STR00001##
Claims
1. A disaccharide linker, which is represented by the following general formula I or general formula II: ##STR00126## In general formula I, G ring represents a structure derived from a monosaccharide molecule, which is connected to the 4-position of N-acetyl-D-glucosamine ring closed in 1,2 positions through a glycosidic bond, wherein the monosaccharide molecule is selected from the group consisting of galactose, N-acetyl-galactose, glucose, mannose, fucose, sialic acid sugar; the glycosidic bond is 1,4-glycosidic bond, 2,4-glycosidic bond or 3,4-glycosidic bond; Z-Y-X- represents a substituent on the G ring, and the substitution position of Z-Y-X- is any position other than position 1 of the G ring derived from the monosaccharide molecule, Wherein, in the structure Z-Y-X-, Z-Y- may or may not exist, When Z-Y- does not exist, X is an aldehyde group, a phosphoric acid group, NH.sub.2, CH.sub.2NH.sub.2, COOH, CH.sub.2SR.sub.p, CH.sub.2SeR.sub.p, N.sub.3, CH.sub.2N.sub.3, wherein R.sub.p is a protecting group; When Z-Y- exists, X is selected from the group consisting of CH.sub.2, CH.sub.2O, CH.sub.2S, CH.sub.2Se, CONH, ON?CH, CONHN?CH, NHCH.sub.2, CH?CH, and the following structures: ##STR00127## Y is a divalent linker or a multivalent linker connecting X and Z, preferably, Y is selected from the following groups: (CH.sub.2).sub.m(CH-w).sub.n-, (CH.sub.2CH.sub.2O).sub.m(CH-w).sub.n-, (PO.sub.4).sub.n, wherein m and n are independently selected from an integer between 0-30, w is a hydrogen atom or a polyethylene glycol structure with different lengths; or a combination of cleavable fragments and the above-mentioned linking fragments; Z is selected from the following cases i)-iv): i) reactive groups with bioorthogonal reactivity or fragments of functional molecules, Preferably, Z is selected from the following reactive groups: azide residues, aldehyde residues, thiol residues, alkyne residues, alkene residues, halogen residues, tetrazine residues, nitrone residues, hydroxylamine residues, nitrile residues, hydrazine residues, ketone residues, boronic acid residues, cyanobenzothiazole residues, allyl residues, phosphine residues, maleimide residues, disulfide residues, thioester residues, ?-halogenated carbonyl residues, isonitrile residues, sydnones residues, selenium residues, conjugated diene residues, phosphoric acid residues, cycloalkyne residues and cycloalkene residues, Alternatively, Z is selected from the following groups: ##STR00128## ##STR00129## Wherein, n is an integer of 1-30, R.sub.1 and R.sub.2 are independently selected from H, CH.sub.3, CH.sub.2CH.sub.3, cyclopropyl or cyclobutyl; Preferably, the functional molecules are selected from: toxins, drugs, fluorescent probes, polyethylene glycol, lipids, polypeptides, nanobodies, DNA and related drugs, RNA and related drugs, cholesterol, antibiotics or radioisotope labels, contrast agents and MRI agents; ii) ##STR00130## Wherein, L.sub.1 is a trivalent linker with three reactive groups, Preferably, L.sub.1 is a branched-chain amino acid with reactive functional groups which is derived from lysine, aspartic acid, glutamic acid, propargylglycine, cysteine, and the following structures: ##STR00131## Wherein, n is an integer of 1-30, L.sub.2 and L.sub.3 are divalent or multivalent linkers connecting L.sub.1 with Z.sub.2 and Z.sub.3, Preferably, L.sub.2 and L.sub.3 are independently selected from the following structures: (CH.sub.2).sub.m(CH-w).sub.n-, (CH.sub.2CH.sub.2O).sub.m(CH-w).sub.n-, (PO.sub.4).sub.n, wherein m and n are independently selected from integers between 0-30, w is a hydrogen atom or other side chain structures, such as polyethylene glycol with different lengths; or a combination of cleavable fragments and the above-mentioned linking fragments, Z is a linking fragment coupling L.sub.1 to the sugar linker, independently is absent or (CH.sub.2).sub.p, wherein p is an integer from 1 to 5, or is a group that can react with the Z group in case i), For example, Z is selected from the following groups: ##STR00132## ##STR00133## Wherein, R.sub.1 and R.sub.2 are each independently selected from H, CH.sub.3, CH.sub.2CH.sub.3, cyclopropyl or cyclobutyl; The definitions of Z.sub.2 and Z.sub.3 are the same as the definitions of Z in case i); iii) ##STR00134## Wherein, L.sub.6 is a tetravalent linker with four reactive groups, Preferably, L.sub.6 is selected from dimerized lysine, dimerized glutamic acid, dimerized aspartic acid, aspartic acid-glutamic acid dipeptide structure, aspartic acid-lysine dipeptide structure, glutamate-lysine structure, or is a structure selected from the following: ##STR00135## Wherein, n is an integer of 1-30, the definitions of L.sub.2, L.sub.3, L.sub.4 are the same as the definitions of L.sub.2, L.sub.3 in ii), the definition of Z is the same as the definition of Z in ii), and the definitions of Z.sub.2, Z.sub.3, Z.sub.4 are the same as the definitions of Z.sub.2 and Z.sub.3 in ii); iv) ##STR00136## wherein, the definition of L.sub.1 is the same as the definition of L.sub.1 in ii), the definitions of L.sub.2, L.sub.3, L.sub.4, L.sub.5 are the same as the definitions of L.sub.2, L.sub.3 in ii), the definitions of Z is the same as the definition of Z in ii), and the definitions of Z.sub.2, Z.sub.3, Z.sub.4, Z.sub.5 are the same as the definitions of Z.sub.2 and Z.sub.3 in ii); Or, when Y, Z are absent, X is selected from: ##STR00137## Wherein, R.sub.1 is hydroxyl OH or azido N.sub.3, R.sub.2 is any group, R.sub.3 is hydroxyl OH or any group containing NH, R.sub.4 is any group, represents the connection position, In the above general formula II, X, Y and Z are each as defined as those in formula I.
2. (canceled)
3. The disaccharide linker according to claim 1, wherein the disaccharide linker is selected from the following specific compounds: ##STR00138## ##STR00139## ##STR00140## ##STR00141## Wherein, R is a fragment involved in Y and Z of claim 1 or a combination thereof, l, m and n are each independently integers of 0-30, Preferably, the disaccharide linker is selected from the following specific compounds: ##STR00142## ##STR00143##
4. A method for preparing the disaccharide linker according to claim 1, as shown in the following reaction scheme: ##STR00144## In the above reaction scheme, G ring is as defined as those in claim 1, and the modification position of the monosaccharide is any modifiable position other than position 1; U is an introduced active group, and is selected from aldehyde group, amino group, azido group, alkyne group; the definitions of X, Y, and Z are as defined as those in claim 1, the method comprises the steps of: 1) The disaccharide structure with an acetylglucosamine structure at the end is modified under the action of enzymes or other small molecular compounds to obtain a disaccharide structure with an active group U, and a Z-Y-X- having orthogonal reactivity or containing a functional molecular fragment is introduced to the disaccharide structure with an active group U via derivatization; and 2) The disaccharide structure introduced with Z-Y-X- having orthogonal reactivity or containing a functional molecular fragment is converted into the disaccharide linker of general formula I by a cyclization reaction.
5. The method according to claim 4, wherein the modification reaction in step 1) is an oxidation reaction, the enzyme is galactose oxidase, and U is an aldehyde group, or the derivatization reaction in step 1) is an oxime-forming reaction, reductive amination, a reaction involving an amino group, or a reaction involving an azido group; in step 2), the cyclization reaction is carried out by using 2-chloro-1,3-dimethylimidazoline chloride or 2-chloro-1,3-dimethyl-1H-benzimidazole-3-chloro.
6. A disaccharide-small molecule drug conjugate which is represented by the following general formulas III, IV or V: ##STR00145## In the above general formulas III, IV and V, ring G, X, Y, Z.sub.3, Z, L.sub.1, L.sub.2, L.sub.3 are as defined as those in claim 1, respectively, and in the structures of general formula IV or V, each L may be the same or different from each other, Z.sub.2, Z.sub.3 are linker structures formed by bioorthogonal groups and Z.sub.2, Z.sub.3, and each Z can be the same or different from each other, and can also coexist or not independently; L is a divalent linker connecting D, D.sub.1 or D2 with the remaining part of general formulas II-V; Preferably, L is selected from (CH.sub.2)a-(OCH.sub.2CH.sub.2)b-(NHCO)n-(CH.sub.2)c-, or selected from the following groups: ##STR00146## ##STR00147## Wherein V and W are bifunctional linkers, including a structure with lysine and propargylglycine as bifunctional linkers, for example, L is selected from: ##STR00148## Wherein, a, b, c, d and e are each independently selected from integers between 0-30, m and n are 0 or 1, R.sub.3 and R.sub.4 are each independently selected from CH.sub.3, (CH.sub.3).sub.2CH, PhCH.sub.2, NH.sub.2(CH.sub.2), NH.sub.2CONH(CH.sub.2).sub.3, R is selected from azidizable monosaccharides, disaccharides, oligosaccharides or PEG structures with different lengths with azido groups, or combinations of PEG and chain or cyclic monosaccharides, disaccharides, and oligosaccharides, wherein the oligosaccharides include branched oligosaccharide chains; represents connection position; D, D.sub.1 and D.sub.2 each independently represent a group derived from a cytotoxic compound, a small-molecule drug, or a fluorescent group, and the small-molecule drug is preferably selected from maytansine, DM-1, DM-4, MMAE, MMAF, SN-38, Dxd, duocamycin, amanitin, PBDs, vincristine, vinblastine, vinorelbine, VP-16, camptothecin, paclitaxel, docetaxel, epothilone A, epothilone B, nocodazole, colchicine, estramustine, cemadotin, eleutherobin, fluorescent reagents, monosaccharides, disaccharides, oligosaccharides, and derivatives thereof, or The small molecule drug is a radiotherapeutic agent; Preferably, D, D.sub.1 and D.sub.2 are each independently selected from the following groups: ##STR00149## ##STR00150## ##STR00151## ##STR00152## or the disaccharide-small molecule drug conjugate is represented by the following general formulas VI, VII, or VIII: ##STR00153## The respective substituents in the general formulas VI, VII and VIII are as defined as those in general formulas III, IV and V, respectively.
7. (canceled)
8. The disaccharide-small molecule drug conjugate according to claim 6, wherein the disaccharide-small molecule drug conjugate is selected from any of the following compounds: ##STR00154## ##STR00155## ##STR00156## In each of the above structures, the structure of the MMAE moiety is: ##STR00157##
9. A glycoengineered antibody with the site-specific linkage at the N-glycosylation site of the Fc region of the antibody, which is represented by the following general formula IX or X: ##STR00158## Wherein, in the above general formula IX, ring G and X, Y and Z are as defined as those in claim 1, respectively, m is selected from 0 or 1, n is selected from 1 or 2; Ab is a monoclonal antibody, a bifunctional antibody or a polyclonal antibody, which is a therapeutic antibody or a functional antibody originated from different species, Preferably, Ab is selected from the group consisting of: trastuzumab, pertuzumab, rituximab, cetuximab, muromonab, gemtuzumab ozogamicin, abciximab, daclizumab, adalimumab, palivizumab, basiliximab, bevacizumab, panitumumab, nimotuzumab, denosumab, dixituzumab, Ramucirumab, necituzumab, ipilimumab, daratumumab, Brentuximab, alemtuzumab, elotuzumab, blinatumomab, nivolumab, pembrolizumab, atezolizumab, avelumab, durvalumab, toripalimab, catumaxomab, belintumumab, emicizumab, amivantamab (Rybrevant). In the above general formula X, X, Y and Z are as defined as those in claim 1, respectively, m selected from 0 or 1, n is selected from 1 or 2; Ab is an antibody.
10. (canceled)
11. A method for preparing the glycoengineered antibody according to claim 9, wherein the method is carried out by the following method I or the following method II: ##STR00159## Wherein, in the above reaction scheme, m is selected from 0 or 1, and G ring, X, Y, and Z are as defined as those in claim 1, respectively, Method I: The wild-type antibody is hydrolyzed by endoglycosidase or endoglycosidase combined with fucosidase to remove the heterogeneous sugar chain at the conservative glycosylation site of the natural antibody to obtain a deglycosylated antibody, the disaccharide linker of claim 1 is then co-incubated with the wild-type antibody, and the disaccharide linker is connected to the conserved glycosylation site of the Fc domain of the antibody under the catalysis of the wild-type endoglycosidase, and the antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose is prepared, and the antibody is modified by the disaccharide linker of general formula I containing the orthogonal reactive group; Method II: The disaccharide linker of claim 1 is co-incubated with the wild-type antibody, the N-oligosaccharide structure of the Fc domain of the wild-type antibody is hydrolyzed under the catalysis of the wild-type endoglycosidase, and at the same time the disaccharide linker is connected to the conservative glycosylation site of the Fc domain of the antibody, thus the antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose is prepared, and the antibody is modified by the disaccharide linker of general formula I containing the orthogonal reactive group, Preferably the wild-type endoglycosidase is N-acetylglucosaminidase, more preferably, the N-acetylglucosaminidase is Endo-S2 (Endoglycosidase-S2), for example, Endoglycosidase Endo-S2 derived from Streptococcus pyogenes; when preparing core-free fucosylated compounds, an endoglycosidase should be used with fucohydrolase together, or the method is performed by the following method I or II: ##STR00160## Wherein, in the above reaction scheme; m is selected from 0 or 1, and X, Y, and Z are as defined as those in claim 1, respectively, Method I: The wild-type antibody is hydrolyzed by endoglycosidase or endoglycosidase combined with fucosidase to remove the heterogeneous sugar chain at the conservative glycosylation site of the natural antibody to obtain a deglycosylated antibody, and the disaccharide linker of claim 1 and the wild-type antibody are then co-incubated, and the disaccharide linker is connected to the conserved glycosylation site of the Fc domain of the antibody under the catalysis of the wild-type endoglycosidase, and the antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose is prepared, and the antibody is modified by the disaccharide linker of general formula I containing an orthogonal reactive group; Method II: The disaccharide linker of claim 1 is co-incubated with the wild-type antibody, the N-oligosaccharide structure of the Fc domain of the wild-type antibody is hydrolyzed under the catalytic action of the wild-type endoglycosidase, and at the same time the disaccharide linker is connected to the conservative glycosylation site of the Fc domain of the antibody, thus the antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose is prepared, and the antibody is modified by the disaccharide linker of general formula I containing an orthogonal reactive group, Preferably, the wild-type endoglycosidase is N-acetylglucosaminidase, more preferably, the N-acetylglucosaminidase is Endo-S2 (Endoglycosidase-S2), for example, Endoglycosidase Endo-S2 derived from Streptococcus pyogenes; when preparing core-free fucosylated compounds, endoglycosidase should be used with fucohydrolase together.
12. (canceled)
13. An antibody-drug conjugate which is represented by the following general formula XI or XII: ##STR00161## In general formula XI, ring G and X, Y, Z, L and D are as defined as those in claim 6, respectively, m is selected from 0 or 1, n is selected from 1 or 2; Ab is an antibody, and the connection site of the sugar structure is the conserved N-glycosylation site on antibody Fc; In formula XII, X, Y, Z, L and D are as defined as those in claim 6, respectively, m is selected from 0 or 1, n is selected from 1 or 2; Ab is an antibody, and the connection site of the sugar structure is the conserved N-glycosylation site on antibody Fc.
14. (canceled)
15. The antibody-drug conjugate according to claim 13, wherein in the structures of general formula XI and general formula XII, -Z-L-D is replaced by: ##STR00162## wherein, Z, L, L.sub.1-L.sub.6 and D.sub.1 and D.sub.2 are as defined as those in claim 1 and claim 6, respectively, and Z.sub.2, Z.sub.3, Z.sub.4, Z.sub.5 are linking fragments generated by the reaction between the bioorthogonal groups of functional molecules and Z.sub.2, Z.sub.3, Z.sub.4, Z.sub.5 respectively, they can be absent simultaneously or independently; the definitions of D.sub.3 and D.sub.4 are the same as those of D.sub.1 and D.sub.2; when the structures of D.sub.1-D.sub.4 are the same, the antibody-drug conjugate of general formula XI or XII represents a high drug loading (drug-antibody ratio, drug to antibody ratio, DAR value) antibody-drug conjugate loading the same drug structure, when D.sub.1-D.sub.4 are different, the antibody-drug conjugate of general formula XI or XII represents an antibody-drug conjugate loading different drug structures in a multidrug-form.
16. A method for preparing the antibody-drug conjugate according to claim 13, and the method includes the following two methods I and II: Method I: a) The disaccharide linker of claim 1 is co-incubated with a wild-type antibody, the Asn297 N-oligosaccharide structure of the Fc domain of the wild-type antibody is hydrolyzed under the catalytic action of wild-type endoglycosidase, meanwhile the disaccharide linker is linked to the Asn297 site of the Fc domain of the antibody, or the disaccharide linker of claim 1 is co-incubated with a deglycosylated antibody and an endoglycosidase, wherein the deglycosylated antibody is obtained by treating the wild-type antibody with an endoglycosidase in advance, it can be also obtained by removing fucose using a fucohydrolase at the same time, and thus preparing the antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose, which is modified by the disaccharide linker of general formula I or II containing the orthogonal reactive group, b) The antibody of general formula X modified by a ?1,6-acetylglucosamine disaccharide containing or not containing fucose, which is modified by the disaccharide linker of general formula I or II containing the orthogonal reactive group, obtained in step a) is coupled with a small molecule drug modified with a corresponding group capable of performing a specific coupling reaction with the orthogonal reactive group to prepare the antibody-drug conjugate of general formula XI or XII; Method II: The disaccharide-small molecule drug conjugate of claim 6 is co-incubated with a wild-type antibody, the Asn297 N-oligosaccharide structure of the Fc domain of the wild-type antibody is hydrolyzed under the catalytic action of wild-type endoglycosidase, meanwhile the disaccharide-small molecule drug conjugate is linked to the Asn297 site of the Fc domain of the antibody, or the disaccharide-small molecule drug conjugate of claim 6 is co-incubated with a deglycosylated antibody and an endoglycosidase, wherein the deglycosylated antibody is obtained by treating the wild-type antibody with an endoglycosidase in advance, it can be also obtained by removing fucose using a fucohydrolase at the same time, and thus the antibody-drug conjugate of general formula XI or XII is prepared.
17. (canceled)
18. The method according to claim 16, wherein the wild-type endoglycosidase is N-acetylglucosaminidase, more preferably, the N-acetylglucosaminidase is Endo-S2 (Endoglycosidase-S2, derived from Streptococcus pyogenes endoglycosidase Endo-S2); when preparing non-core fucosylated compounds, endoglycosidase should be used with fucohydrolase together, Preferably, in Method I, the orthogonal reactive group and the corresponding group capable of performing a specific coupling reaction with the orthogonal reactive group are selected from any combination of the following: azido group and alkynyl, mercapto and maleimide group, mercapto and mercapto or activated forms of mercapto, aldehyde group and amino, aldehyde group and aminooxy group or hydrazine group, Preferably, in the step b) of Method I, the drug linker has the following groups, so as to be coupled with the small molecule drug modified by the corresponding group: ##STR00163## ##STR00164## Preferably, the small molecule drug modified by the corresponding group is selected from the following compounds: ##STR00165## ##STR00166## ##STR00167## ##STR00168##
19. The method according to claim 16, wherein method I is performed as shown in the following reaction scheme: ##STR00169## Wherein, in the above reaction scheme, m is selected from 0 or 1, X, Y, Z, Z, L, and D are as defined as those in claim 1, respectively; E is an orthogonal reactive group that can react with Z, wherein, the glycoengineered antibody in the reaction scheme is obtained according to the method of claim 11; or, wherein Method I is performed as shown in the following reaction scheme: ##STR00170## Wherein, in the above reaction scheme, m is selected from 0 or 1, X, Y, Z, Z, L, and D are as defined as those in claim 1, respectively; E is an orthogonal reactive group that can react with Z, wherein, the glycoengineered antibody in the reaction scheme is obtained according to the method of claim 12, preferably, the preparation method is as shown in the following reaction scheme: ##STR00171## ##STR00172## Wherein, L and D are as defined as those in claim 6, respectively, and E.sub.3 is a corresponding group that reacts orthogonally with an aldehyde group, and is selected from thiopyrazolone, o-aminobenzamidoxime, and hydroxylamine, such as: ##STR00173## X.sub.2 is the structure formed by the reaction between an aldehyde group and E.sub.3; E.sub.5 is a corresponding group that undergoes an orthogonal reaction with an azido group, which is selected from a straight-chain alkynyl group, a DBCO structure, and a BCN structure, and X.sub.4 is a structure formed by the reaction between an azido group and E.sub.5.
20. (canceled)
21. The method according to claim 16, wherein Method II includes: As shown in the following reaction scheme, the endoglycosidase is co-incubated with an antibody and the disaccharide-small molecule drug conjugate of claim 6, when the N-oligosaccharide at the conserved glycosylation site Asn297 of the Fc domain of the antibody is hydrolyzed, the disaccharide-small molecule drug conjugate is transferred to Asn297 site (Method 1), or the disaccharide-small molecule drug conjugate of claim 6 is co-incubated with a deglycosylated antibody and endoglycosidase (method II), in which the above-mentioned deglycosylated antibody is obtained by treating the wild-type antibody with endoglycosidase in advance, and it can also be obtained by removing fucose using fucohydrolase at the same time, to realize the site-specific and quantitative introduction of small molecule drugs into the sugar chain, and obtain the corresponding antibody-drug conjugates. ##STR00174## or, Method II includes: As shown in the following reaction scheme, the endoglycosidase is co-incubated with an antibody and the disaccharide-small molecule drug conjugate of claim 6, when the N-oligosaccharide at the conserved glycosylation site Asn297 of the Fc domain of the antibody is hydrolyzed, the disaccharide-small molecule drug conjugate is transferred to Asn297 site (Method 1), or the disaccharide-small molecule drug conjugate of claim 6 is co-incubated with a deglycosylated antibody and endoglycosidase (method II), in which the above-mentioned deglycosylated antibody is obtained by treating the wild-type antibody with endoglycosidase in advance, and it can also be obtained by removing fucose using fucohydrolase at the same time, to realize the site-specific and quantitative introduction of small molecule drugs into the sugar chain, and obtain the corresponding antibody-drug conjugates. ##STR00175##
22. (canceled)
23. The disaccharide linker according to claim 1 in antibody glycoengineered modification or in the preparation of an antibody drug conjugate.
24. The antibody-drug conjugate according to claim 13 in the preparation of drugs, pharmaceutical compositions or diagnostic reagents, wherein the drugs in the conjugate are selected from anti-tumor drugs, anti-inflammatory drugs, antiviral drugs, anti-infectious diseases drugs or other immunotherapeutic drugs.
25. The disaccharide-small molecule drug conjugate of claim 6 in antibody glycoengineered modification or in the preparation of an antibody drug conjugate.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0115]
[0116]
[0117]
DETAILED DESCRIPTION
[0118] Term: multivalent linker herein refers to a linker which has a valence greater than divalent.
[0119] The glycosidase used in the invention is expressed in the Escherichia coli system in the laboratory. The small molecule cytotoxic drug DM1 and MMAE used in the invention were purchased from RESUPERPHARMTECH (Shanghai); DBCO and BCN compounds were purchased from Chengdu Bioconebio Co., Ltd; 3-azidopropylamine was purchased from J&K Scientific (shanghai); N-acetyl-D-lactosamine and acetonitrile were purchased from Shanghai Acmec Biochemical Co., Ltd; BTTAA was purchased from Taizhou Greenchem Company; Galactose oxidase, catalase and horseradish peroxidase were purchased from Sangon Biotech (Shanghai); Amino acid compounds were purchased from JL Biochem (Shanghai) Ltd; 4-pentyne acid was purchased from Shanghai Bide Pharmaceutical Technology Co., Ltd. Other compounds and reagents of which the manufacturers are not specified were purchased from SINOPHMARM Chemical Reagent Co., Ltd.
[0120] The instruments and chromatographic columns used in the present invention include: Waters Xevo G2-XS QTOF, analytical high-performance liquid chromatography (Thermo ultimate 3000), analytical high-performance liquid chromatography (Beijing Innovation Tongheng LC3000), and preparative high-performance liquid chromatography (Beijing Innovation Tongheng LC3000); Thermo C18 (Acclaim? 120.5 ?m. 4.6?250 mm), Agilent SB-C18 (5 ?m. 4.6?150 mm), Waters C18 column (ACQUITY UPLC BEH C18. 1.7 ?m. 2.1?50 mm).
[0121] Instrument for measuring antibody molecular weight: Liquid chromatography-mass spectrometry (LC-MS), Waters Xevo G2-XS QTOF, equipped with Waters C4 (ACQUITY UPLC Protein BEH C4, 1.7 ?m. 2.1 mm?50 mm).
[0122] The preparation route of the disaccharide linker, glycoengineered antibody, and glycosite-specific antibody-drug conjugate (ADC) in the present application is illustrated and summarized in the following reaction scheme.
[0123] General Preparation Example
[0124] The synthesis route of the disaccharide linkers is as follows:
##STR00057##
[0125] Note: a. Galactose oxidase GOase, catalase, horseradish peroxidase HRP, O.sub.2, pH 7.0, 30? C.: b. Hydroxylamine hydrochloride, sodium cardonate, rt; Sodium borohydride, nickel chloride hexhydrate, 4? C.; c. 1H imidazol-1-sulfonyl azide hydrochloride, potassium carbonate, copper sulfate, 37? C.; d. 3-azidopropylamine, NaCNBH.sub.3, pH 6.0, 0? C.; e. O-(2-azido ethyl) hydroxylamine hydrochloride, pH 7.4, 37? C.; f. DMC, triethylamine, 0? C. or CDMBI, potassium phosphate, 0? C.; g. propargyl amine, NaCNBH.sub.3, pH 6.0, 0? C.; h. O-(2-propargyl) hydroxylamine hydrochloride, pH 7.4, 37? C.; i. Biotin-ONH.sub.2. pH 7.4, 37C; j. FITC-NCS, pH 7.4, 37? C.; k. Azidoacetic acid active ester, pH 7.4; m. CMP sialic acid (as shown in compound 70 below), ?-2,6-sialyltransferase, 100 mM Tris buffer, pH 8.0. n. DBCO-CONHS 80, pH 7.4/DMF.
##STR00058##
[0126] Note: g. Endo-S2, containing (not containing) a certain amount of DMSO, DMA, or DMF as co solvents, buffer solution oy pH 7.0, 30? C.; h. buffer of pH 7.0 containing (not containing) a certain amount of DMSO, DMA, or DMF as co solvents, general operation 3 to general operation 10.
[0127] General Operation 1:
[0128] Method 1 for Preparing Non Natural Glycoengineered Antibodies:
[0129] The derivative disaccharide oxazoline (i.e. compounds G1-G11, G13-G14) and sialic acid-derived disaccharide oxazoline (i.e. compound G12) as prepared, wild-type antibody, and wild-type endoglycosidase Endo-S2 are incubated each at concentrations of 0.5 mM, 5 mg/mL, and 0.4 mg/mL, respectively, in a reaction system of pH 7.0 at 30? C. for 0.5 to 12 hour. After purification by protein A, the desired non natural glycoengineered antibodies Ab-1 to Ab-14 are obtained, as shown in examples 37-50 below.
##STR00059## ##STR00060## ##STR00061##
[0130] General Operation 2:
[0131] Method 2 for Preparing Non Natural Glycoengineered Antibodies:
[0132] The derivative disaccharide oxazoline (i.e. compounds G3, G8, G10, G13) and sialic acid-derived disaccharide oxazoline (i.e. compound G12) as prepared, the defucosylated antibody, and wild-type endoglycosidase Endo-S2 are incubated each at concentrations of 0.5 mM, 5 mg/mL, and 0.4 mg/mL, respectively, in a reaction system of pH 7.0 at 30? C. for 0.5 to 12 hours. After purification by protein A, the desired non natural glycoengineered antibodies Ab-15 to Ab-19 are obtained, as shown in examples 51-55 below.
##STR00062##
[0133] General Operation 3:
[0134] Method for Preparing Glycosite-Specific Antibody-Drug Conjugate (ADC) in One Step:
[0135] The drug-linker disaccharide oxazoline (i.e. compounds DG-1 to DG-7, dDG1 to dDG3) as prepared, wild-type antibody, and wild-type endoglycosidase Endo-S2 are incubated each at concentrations of 0.5 mM, 5 mg/mL, and 0.4 mg/mL, respectively, in a reaction system of pH 7.0 at 30? C. for 0.5 to 12 hours. After it is converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugates gsADC-30 to gsADC-37 are obtained, as shown in examples 89-96 below.
[0136] General Operation 4:
[0137] Method 1 for Preparing Site-Specific ADC Based on Aldehyde Disaccharide Antibody:
[0138] The disaccharide antibody containing aldehyde group (i.e. non natural glycoengineered antibody Ab-2) as prepared, drug-linker containing 2-aminobenzamidoxime group (i.e. compound D2) are incubated each at concentrations of 5 mg/mL, and 0.3 mM, respectively, in a reaction system of pH 7.0-7.4 at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugate gsADC-1 is obtained, as shown in example 56 below.
[0139] General Operation 5:
[0140] Method 2 for Preparing Site-Specific ADC Based on Aldehyde Disaccharide Antibody:
[0141] The disaccharide antibody containing aldehyde group (i.e. non natural glycoengineered antibody Ab-2) as prepared, drug-linker containing aminooxy group (i.e. compound D1) are incubated each at concentrations of 5 mg/mL, and 0.3 mM, respectively, in a reaction system of pH 7.5 at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugate gsADC-2 is obtained, as shown in example 57 below.
[0142] General Operation 6:
[0143] Method 3 for Preparing Site-Specific ADC Based on Aldehyde Disaccharide Antibody:
[0144] The disaccharide antibody containing aldehyde group (i.e. non natural glycoengineered antibody Ab-2) as prepared, drug-linker containing thioPz group (i.e. compounds D3 and D4) are added to concentrations of 5 mg/mL, and 0.3 mM, respectively, then adding EDTA, 10% TritonX-100 to the final concentrations of 0.5 mM and 1%, the reaction system of pH 5.5 is incubated at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugates gsADC-3 and gsADC-4 are obtained as shown in examples 58 and 59 below.
[0145] General Operation 7:
[0146] Method 1 for Preparing Site-Specific ADC Based on Azide Disaccharide Antibody:
[0147] The disaccharide antibody containing azide group (i.e. non natural glycoengineered antibody Ab-3, Ab-4, Ab-6, Ab-9, Ab-15) as prepared. DBCO drug-linker (i.e. compounds D6-D9 and D13) are incubated each at concentrations of 5 mg/mL, and 0.3 mM, respectively, in a reaction system of pH 7.4 at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugates gsADC-5?gsADC-20, gsADC-29 are obtained, as shown in examples 60-76 below.
[0148] General Operation 8:
[0149] Method 2 for Preparing Site-Specific ADC Based on Azide Disaccharide Antibody:
[0150] The disaccharide antibody containing azide group (i.e. non natural glycoengineered antibody Ab-3, Ab-4, Ab-6, Ab-9, Ab-14, Ab-15) as prepared, BCN drug-linker (i.e. compounds D5, D11, D12) are incubated each at concentrations of 5 mg/mL, and 0.3 mM, respectively, in a reaction system of pH 7.4 at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugates gsADC-21?gsADC-24, gsADC-39, gsADC-41?gsADC-43 are obtained, as shown in examples 77-84 below.
[0151] General Operation 9:
[0152] Method 3 for Preparing Site-Specific ADC Based on Azide Disaccharide Antibody:
[0153] The disaccharide antibody containing azide group (i.e. non natural glycoengineered antibody Ab-3, Ab-4. Ab-6, Ab-9) as prepared, straight chain alkyne drug-linker (i.e. compound D10) are added to concentrations of 5 mg/mL, and 0.3 mM, respectively, then adding 6 mM Cu(I)-BTTAA solution (preparation: 21 ?L of ddH.sub.2O, 3 ?L of 60 mM CuSO.sub.4 solution, 3 ?L of 300 mM BTTAA solution, and 3 ?L of 900 mM sodium ascorbate solution are added in sequence) to the final concentration of 0.5 mM, then the reaction system of pH 7.4 is incubated at 37? C. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugates gsADC-25? gsADC-28 are obtained, as shown in examples 85-89 below.
[0154] General Operation 10:
[0155] Method for Preparing Site-Specific ADC Based on Defucosylated Disaccharide:
[0156] The drug-linker disaccharide oxazoline (i.e. compound DG-6) as prepared, defucosylated antibody, and wild-type endoglycosidase Endo-S2 are incubated each at concentrations of 0.5 mM, 5 mg/mL, and 0.4 mg/mL, respectively, in a reaction system of pH 7.0 at 30? C. for 1 hour. After it is completely converted into the product as confirmed by LC-MS, after purification by protein A, the desired glycosite-specific and quantitative antibody-drug conjugate gsADC-38 is obtained, as shown in example 97 below.
[0157] The specific processes for preparing disaccharide linkers, glycoengineered antibodies, and glycosite-specific ADCs using the aforementioned general preparation method are described by the specific examples as below.
I: Preparation of Disaccharide Linkers
Example 1: Synthesis of Compounds G1-G2
[0158] The structures and synthesis methods of compounds G1-G2 are as follows:
##STR00063##
[0159] Step 1: Compound 1 (20 mg, 52.2 ?mol) was weighed and dissolved in 800 ?L of 50 mM PB, pH 7.0 buffer, and 2-chloro-1,3-dimethyl-1H-benzimidazole-3-chloride (CDMBI, 56.4 mg, 261 ?mol) was added to the above reaction system, mixed well and cooled to 0? C., adding potassium phosphate (166 mg, 0.783 mmoL), then adding ddH.sub.2O to a total volume of 1044 ?L and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation, and a non-desalinated compound G1 (dissolved in water to obtain a 50 mM stock) was obtained. After aliquoting, the stock was stored at ?80? C. for use. HRMS, calculated for C.sub.14H.sub.23NO.sub.10 [M+H].sup.+ 366.14, found 366.1322
[0160] Step 2: After blowing O.sub.2 into Compound G1 (5 mg, 274 ?L of 50 mM stock) obtained in step 1 for 10 min, 11.9 U of galactose oxidase GOase, 120 U of horseradish peroxidase HRP, and 2.38 kU of catalase were added to the reaction system to achieve a volume of 300 ?L. The reaction system was kept at 30? C., at 888 rpm for 4 h, and then the resultant was separated and purified by using a P2 column. After adding 1 equivalent of NaOH and freeze drying, Compound G2 was obtained (which is dissolved to obtain a 50 mM stock, solvent 50 mM PB, pH 7.0), After aliquoting, the stock was stored at ?80? C. for use. HRMS, calculated for C.sub.14H.sub.21NO.sub.10[M+H].sup.+ 364.1243, found 364.1201.
Example 2: Synthesis of Compound G3
[0161] The structure and synthesis method of compound G3 are as follows:
##STR00064##
[0162] Step 1: Compound 1 (20 mg. 52.2 ?mol) was weighed and dissolved in 1 mL of 50 mM PB, pH 7.0 buffer solution, followed by blowing O.sub.2 for 10 min, and then 47.6 U of galactose oxidase GOase, 480 U of horseradish peroxidase HRP, and 9.52 kU of catalase were added to the above reaction system to a volume of 1.19 mL. The reaction system was kept at 30? C., at 888 rpm for 4 h, and then the resultant was purified by using a P2 column and freeze dried to obtain compound 2 (18 mg, yield 90.5%). HRMS, calculated for C.sub.14H.sub.23NO.sub.11 [M+H].sup.+ 382.1349, found 382.1331
[0163] Step 2: Compound 2 (18 mg, 47.2 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB, pH 7.4 buffer, and Compound 12 (5.3 mg, 51.9 ?mol) was added to the above reaction system and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified using a semi preparative C18 column to obtain compound 3 (20 mg, yield 91%). HRMS, calculated for C.sub.14H.sub.23NO.sub.10 [M+H].sup.+ 466.1785, found 466.1732.
[0164] Step 3: Compound 3 (20 mg, 43 ?mol) was weighed and dissolved in a 700 ?L of 50 mM PB, pH7.0 buffer. CDMBI (46.44 mg, 215 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C. After adding potassium phosphate (137 mg. 0.645 mmoL), ddH.sub.2O was added to a total volume 860 ?L. The system was reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a reaction system containing compound G3. HRMS, calculated for C.sub.16H.sub.25N.sub.5O.sub.10 [M+H].sup.+ 448.1679, found 448.1616. .sup.1H NMR (600 MHz., Deuterium Oxide) ? 7.57 (d, J=4.8 Hz, 0.65H), 6.91 (d, J=4.6 Hz, 0.3511), 6.01 (dd, J=7.3, 2.3 Hz, 1H, 4.43 (d, J=7.8 Hz, 0.7H), 4.38 (d, J=7.9 Hz, 0.3H), 4.34 (m, 0.3H), 4.33-4.3 (m, 1H), 4.25-4.15 (m, 3H), 4.11 (m, 1H), 3.98 (dd, J=3.4, 1.1 Hz, 0.7H), 3.74 (m, 1H). 3.67-3.57 (m, 3H), 3.53-3.44 (m, 3H), 3.40-3.35 (m, 1H). 1.99 (t, J 1.9 Hz, 3H).
Example 3: Synthesis of Compound G4
[0165] The structure and synthesis method of compound G4 are as follows:
##STR00065##
[0166] Step 1: Compound 2 (18 mg, 47.2 ?mol) was weighed and dissolved in 200 ?L of 0.2 M PB, pH 6.0 buffer, and compound 13 (23.6 mg, 236 ?mol) and sodium cyanide borohydride (NaCNBH.sub.3) (59.5 mg, 944 ?mol) were added to the above reaction system, and reacted at 0? C. for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was purified by using a P2 column to obtain compound 4 (16 mg, yield 72.8%). HRMS, calculated for C.sub.17H.sub.31N.sub.5O.sub.10 [M+H].sup.+ 466.2149, found 466.2132.
[0167] Step 2: Compound 4 (16 mg, 34.4 ?mol) was weighed and dissolved in a 500 ?L 50 mM PB, pH 7.0 buffer. CDMBI (37.2 mg, 172 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (109.6 mg, 0.516 mmoL), and ddH.sub.2O to a total volume of 688 ?L and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain the supernatant containing compound G4. HRMS, calculated for C.sub.17H.sub.29N.sub.5O.sub.9 [M+H].sup.+ 448.2043, found 448.2102.
[0168] .sup.1H NMR (600 MHz, Deuterium Oxide) ? 5.97 (d, J=7.3 Hz. 1H), 4.29 (d, J=7.9 Hz, 1H), 4.27 (dd, J=3.0, 1.6 Hz, 1H), 4.07 (m, 1H), 3.72 (d, J=3.5 Hz, 1H), 3.69 (dd, J=12.3, 2.5 Hz, 1H), 3.63-3.58 (m, 1H), 3.56-3.49 (m, 2H), 3.40-3.35 (m, t H), 3.31 (m, 1H), 3.29 (t, J=6.7 Hz, 3H), 2.93 (q, J=7.4 Hz, 2H), 2.68 (q, J=7.3 Hz, 2H), 1.95 (d, J=1.7 Hz, 3H). 1.67 (p, J=7.1 Hz, 2H).
Example 4: Synthesis of Compound G5
[0169] The structure and synthesis method of compound G5 are as follows:
##STR00066##
[0170] Step 1: Compound 2 (18 mg, 47.2 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB, pH 7.0 buffer. Hydroxylamine hydrochloride (3.6 mg, 52 ?mol) and 180 ?L of methanol were added to the above reaction system, mixed well, and slowly added with sodium carbonate (2.6 mg, 23.6 ?mol). After reacting at room temperature for 3 hours, nickel chloride hexahydrate (28 mg, 118 ?mol/L) and sodium borohydride (26.8 mg, 0.7 mmoL) were added to the system. The reaction system was kept at 4? C. overnight, and then centrifuged to obtain a supernatant, and the precipitate was washed twice with water. The washing liquids were combined and purified using a P2 column, followed by freeze-drying to obtain compound 5 (15 mg, yield 83%). HRMS, calculated for C.sub.14H.sub.26N.sub.2O.sub.10 [M+H].sup.+ 383.1665, found 383.1661.
[0171] Step 2: Compound 5 (15 mg, 39.25 ?mol) was weighed and dissolved in a 600 ?L of 50 mM PB, pH 7.0 buffer. CDMBI (42.4 mg, 196.3 ?mol) was added to the above reaction system, mixed well, cooled to 0? C., adding potassium phosphate (125 mg, 0.589 mmoL), and adding ddH.sub.2O to a total volume of 785 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G5. HRMS, calculated for C.sub.14H.sub.24N.sub.2O.sub.9 [M+H].sup.+ 65.156, found 365.1521.
Example 5: Synthesis of Compound G6
[0172] The structure and synthesis method of compound G6 are as follows:
##STR00067##
[0173] Step 1: Compound 5 (15 mg, 39.35 ?mol) was weighed and dissolved in a 500 ?L of CH.sub.3OH/H.sub.2O=1:4 system. 1H-imidazole-sulfonyl azide hydrochloride (12.3 mg, 58.9 ?mol), potassium carbonate (16.3 mg. 117.75 ?mol), and copper sulfate (6.3 mg, 39.25 ?mol) were added to the above reaction system, and reacted at 37? C. for 4 hours. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified using a P2 column and freeze dried to obtain compound 6 (13 mg, yield 81.3%). HRMS, calculated for C.sub.14H.sub.24N.sub.4O.sub.10 [M+H].sup.+ 409.157. found 409.1526.
[0174] Step 2: Compound 6 (13 mg, 31.85 ?mol) was weighed and dissolved in 500 ?L of 50 mM PB, pH 7.0 buffer. CDMBI (34.4 mg, 159.3 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C. adding potassium phosphate (101.5 mg, 0.478 ?mol), and adding ddH.sub.2O to a total volume of 637 ?L and reacted for 2 hours at 0? C. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G6. HRMS, calculated for C.sub.14H.sub.22N.sub.4O.sub.9 [M+M].sup.+ 391.1465, found 391.1432.
Example 6: Synthesis of Compound G7
[0175] ##STR00068##
[0176] Step 1: Compound 2 (18 mg, 47.2 ?mol) was weighed and dissolved in 200 ?L 0.2 M PB, pH 6.0 buffer. Compound 15 (13 mg, 236 ?mol) and sodium cyanide borohydride (59.5 mg, 944 ?mol) were added to the above reaction system, and reacted 0? C. for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a P2 column to obtain compound 7 (14 mg, yield 70.5%). HRMS, calculated for C.sub.17H.sub.28N.sub.2O.sub.10 [M+H].sup.+ 421.1822, found 421.1876
[0177] Step 2: Compound 7 (16 mg, 38 ?mol) was weighed and dissolved in a 500 ?L 50 mM PB, pH 7.0 buffer. CDMBI (41 mg, 190 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (121 mg, 0.57 mmoL), and ddH.sub.2O to a total volume of 688 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a reaction system containing compound G7. HRMS, calculated for C.sub.17H.sub.26N.sub.2O.sub.9 [M+H].sup.+ 403.1716, found 403.1733. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 5.97 (d, J=7.3 Hz, 1H). 4.33-4.23 (m, 2H), 4.11-4.03 (m, 1H), 3.74 (d, J=3.6 Hz, 1H), 3.69 (dd, J=12.3, 2.5 Hz, 1H), 3.63-3.58 (m, 1H), 3.56-3.48 (m, 2H), 3.40-3.35 (m, 1H), 2.90-2.86 (m, 3H), 2.67-2.62 (m, 2H), 1.95 (d, J=1.8 Hz, 3H).
Example 7: Synthesis of Compound G8
[0178] ##STR00069##
[0179] Step 1: Compound 2 (18 mg, 47.2 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB, pH 7.4 buffer. Compound 16 (5.6 mg, 51.9 ?mol) was added to the above reaction system and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column to obtain compound 8 (18.1 mg, yield 88%). HRMS, calculated for C.sub.17H.sub.26N.sub.2O.sub.11 [M+H].sup.+ 435.1615, found 435.1610.
[0180] Step 2: Compound 8 (18.1 mg, 41.6 ?mol) was weighed and dissolved in a 700 ?L of 50 mM PB, pH 7.0 buffer. CDMBI (45 mg, 208 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C. adding potassium phosphate (132.5 mg, 0.624 mmoL), ddH.sub.2O to a total volume of 860 ?L and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G8. HRMS, calculated for C.sub.17H.sub.24N.sub.2O.sub.10 [M+H].sup.+ 417.1509, found 417.1505.
[0181] .sup.1H NMR (600 MHz, Deuterium Oxide) ? 7.53 (d, J=4.9 Hz, 0.65H), 6.95 (d, J=4.8 Hz, 0.35H), 5.98 (d, J=7.3 Hz, 1H), 4.61 (d, J=9.9 Hz, 2H), 4.43-4.25 (m, 3H), 4.15-4.05 (m. 1.3H), 3.95 (d, J=3.4 Hz, 0.7H), 3.76-3.67 (m, 1H). 3.65-3.53 (m, 3H). 3.46 (dd, J=10.1, 7.8 Hz, 1H), 3.36 (m, 1H), 1.96 (d, J=1.6 Hz, 3H).
Example 8: Synthesis of Compound G9
[0182] ##STR00070##
[0183] Step 1: Compound 5 (15 mg, 39.3 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB, pH 7.4 buffer. Compound 17 (23.3 mg. 117.9 ?mol) was added to the above reaction system and reacted at room temperature for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a P2 gel column to obtain compound 9 (14 mg, yield 76.7%), HRMS, calculated for C.sub.16H.sub.27N.sub.5O.sub.11 [M+H].sup.+ 466.1785, found 466.1725.
[0184] Step 2: Compound 9 (14 mg, 30.1 ?mol) was weighed and dissolved in 500 ?L of D.sub.2O. CDMBI (32.5 mg, 150.5 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (96 mg, 0.45 mmoL), D.sub.2O to a total volume of 602 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G9. HRMS, calculated for C.sub.16H.sub.25N.sub.5O.sub.10 [M+H].sup.+ 448.1679, found 448.1666.
Example 9t Synthesis of Compound G10
[0185] ##STR00071##
[0186] Step 1: Compound 2 (20 mg, 52.48 ?mol) was weighed and dissolved in a 200 ?L of 50 mM PB buffer, pH 7.4. Compound 18 (22.6 mg, 63 ?mol) was added to the above reaction system, and kept at room temperature for 8 hours. Thereafter, the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column to obtain compound 10 (32.6 mg, yield 86%). HRMS, calculated for C.sub.28H.sub.46N.sub.6O.sub.14S [M+H].sup.+ 723.2871, found 723.2877.
[0187] Step 2: Compound 10 (10 mg, 13.85 ?mol) was weighed and dissolved in DO. CDMBI (15 mg, 69.3 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (44 mg, 208 ?mol), and D.sub.2O to a total volume of 277 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G10. HRMS, calculated for C.sub.28H.sub.44N.sub.6O.sub.13S [M+H].sup.+ 705.2765, found 705.2771.
Example 10: Synthesis of Compound G11
[0188] ##STR00072##
[0189] Step 1: Compound 2 (20 mg, 52.48 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB. pH 7.4 buffer. Compound 90 Benzyl-NCS (9.4 mg, 63 ?mol) was added to the above reaction system, which was kept at room temperature for 8 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative CIS column to obtain compound 11 (17 mg, 62%). HRMS, calculated for C.sub.22H.sub.33N.sub.3O.sub.10S [M+H].sup.+ 532.1965, found 532.1911.
[0190] Step 2: Compound 11 (17 mg, 32.4 ?mol) was weighed and dissolved in D.sub.2O. CDMBI (35 mg, 162 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (103 mg, 0.486 mmoL), and D.sub.2O to a total volume of 650 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G11. HRMS, calculated for C.sub.22H.sub.31N.sub.3O.sub.9S [M+H]+ 514.1859, found 514.1880.
[0191] .sup.1H NMR (600 MHz, Deuterium Oxide) ? 7.32 (t, J=7.6 Hz, 2H), 7.25 (dd, J=7.9, 5.7 Hz, 3H), 5.97 (d, J=7.3 Hz, 1H), 4.7 (m, 2H), 4.39-4.15 (m. 2H), 4.04 (m, 1H), 3.70 (dd, J=12.3, 2.5 Hz, 4H), 3.56 (dd, J=12.3, 6.4 Hz, 3H), 3.51-3.43 (m, 1H), 3.43-3.31 (m, 2H), 1.97 (m, 3H).
Example 11: Synthesis of Compound G12
[0192] ##STR00073##
[0193] Step 1: Compound 1 (10 mg, 26.1 ?mol) and compound 70 (16 mg, 26.1 ?mol) were weighed and dissolved in 1.5 mL of 100 mM Tris buffer at pH 8.0. 30 ?g of ? 2.6-sialyltransferase (? 2.6-sialyltransferase (Pd2,6ST) was added to the above reaction system. When the reaction was complete as monitored by TLC plate, the resultant was separated and purified by using a P2 column to obtain compound 71 (12.6 mg, yield 72%). HRMS, calculated for C.sub.25H.sub.42N.sub.2O.sub.19 [M+H].sup.+ 675.246, found 675.2433.
[0194] Step 2: Compound 71 (2 mg, 2.97 ?mol) was weighed and dissolved in D.sub.2O. CDMBI (3.2 mg, 14.83 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (9.5 mg, 44.55 ?mol), and D.sub.2O to a total volume of 148 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G12. HRMS, calculated for C.sub.23H.sub.40N.sub.2O.sub.18 [M+H].sup.+ 657.2354, found 657.2301.
[0195] .sup.1H NMR (600 MHz, Deuterium Oxide) ? 5.71 (d, J=7.3 Hz, 1H), 4.07-3.99 (m, 2H), 3.83-3.77 (m, 1H), 3.60-3.47 (m. 4H), 3.46-3.35 (m, 3H), 3.35-3.18 (m, 7H), 3.15-3.05 (m, 3H). 2.63 (m, 1H), 1.69 (d, J=1.9 Hz. 3H), 1.66 (s, 3H), 1.30 (t, J=12.1 Hz, 1H).
Example 12: Synthesis of Compound G13
[0196] ##STR00074##
[0197] Step 1: Compound 5 (15 mg, 39.3 ?mol) was weighed and dissolved in 200 ?L of 50 mM PB, pH 7.4 buffer. Compound 80 (23.7 mg, 59 ?mol) was added to the above reaction system and reacted at room temperature for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column to obtain compound 81 (22 mg, yield 83.7%). HRMS, calculated for C.sub.33H.sub.39N.sub.3O.sub.12 [M+H].sup.+ 670.2612, found 670.2661.
[0198] Step 2: Compound 81 (10 mg, 14.9 ?mol) was weighed and dissolved in 500 ?L of D.sub.2O. CDMBI (16.2 mg, 74.7 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C., adding potassium phosphate (31.6 mg, 149 ?mol), and D.sub.2O to a total volume of 600 ?L, and reacted at 0? C. for 2 hours. It was observed that plenty of precipitation was generated, which was removed by centrifugation to obtain a supernatant containing compound G13. HRMS, calculated for C.sub.33H.sub.37N.sub.3O.sub.11 [M+H].sup.+ 652.2506, found 652.2501.
Example 13: Synthesis of Compound G14
[0199] ##STR00075##
[0200] Step 1: Compound 82 (369 mg, 1 mmol) was weighed and dissolved in 2 mL of DMF. HATU (1.52 g, 4 mmol) and compound 3-azidopropylamine (500 ?L, 50 mmol) and N,N-diisopropylethylamine DIPEA (1 mL, 5.9 mmol) were added in sequence, mixed well and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain a white powder compound 83 (yield 92%). HRMS, calculated for C.sub.26H.sub.31N.sub.9O.sub.4 [M+H].sup.+ 534.2499, found 534.6498.
[0201] Step 2: Compound 83 (54 mg, 0.1 mmol) was weighed and dissolved in 500 ?L of methanol, added with 250 ?L of triethylamine, and reacted at room temperature for 2 hours. After being freeze-dried, compound 84 was obtained (yield 94%). HRMS, calculated for C.sub.11H.sub.21N.sub.9O.sub.2 [M+H].sup.+ 312.1818. found 312.8763.
[0202] Step 3: Compound 84 (9 mg, 0.028 mmol) was weighed and dissolved in 500 ?L of DMF, compound 2 (16.8 mg, 0.044 mmol) and NaCNBH.sub.3 (18.4 mg, 0.29 mmol) were sequentially added. After mixing, the reaction was carried out at 37? C. for 6 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain a white powder compound 85 (yield 62%). HRMS, calculated for C.sub.25H.sub.43N.sub.10O.sub.11 [M+H].sup.+ 659.3113, found 659.7651.
[0203] Step 4: Compound 85 (18 mg, 0.027 mmol) was weighed and dissolved in 500 ?L of 50 mM PB buffer at pH 7.4, DMC (65.91 mg, 0.39 mmol) and triethylamine (18 ?L. 0.13 mmol) were added thereto and reacted at 0? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound G14 (yield 79%). HRMS, calculated for C.sub.25H.sub.42N.sub.10O.sub.11: [M+H].sup.+ 643.3119, found 643.3786.
II: Preparation of Small Molecule Drug-Linkers
Example 14: Synthesis of Compound D1
[0204] The structure and synthesis method of compound D1 are as follows:
##STR00076##
[0205] Step 1: Compound 20 (5.6 mg, 17.8 ?mol) was weighed and dissolved in 100 ?L of DMF. HATU (13.5 mg, 35.6 ?mol), compound 19 (NH.sub.2-VC-PAB-MMAE, 20 mg, 17.8 ?mol), and N,N-diisopropylethylamine DIPEA (9.3 ?L, 53.4 ?mol) were added to the above system in sequence, and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound 21 (20 mg, yield 87%). HRMS, calculated for C.sub.75H.sub.97N.sub.11O.sub.14 [M+H].sup.+ 1418.7975 [M+2H].sup.2+ 709.9026, found 1418.7913, 709.9021
[0206] Step 2: Compound 21 (20 mg, 14.1 ?mol) was weighed and dissolved in 100 ?L of DMF. 100 ?L of triethylamine was added to the above system, mixed well, and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound D1 (16.5 mg, yield 89%). HRMS, calculated for C.sub.60H.sub.97N.sub.11O.sub.14[M+H].sup.+ 1196.7294, [M+2H].sup.2+ 598.8685, found 1196.7263, 598.8622.
Example 15: Synthesis of Compound D2
[0207] The structure and synthesis method of compound D2 are as follows:
##STR00077##
[0208] Step 2: Compound 23 (352 mg, 2.2 mmol) was weighed and dissolved in 10 mL of tetrahydrofuran. NaH (60% in oil, 88 mg, 2.2 mmol) was added to the above system at 0? C. The reaction system was stirred at 0? C. for 15 minutes and slowly added with compound 22 (332 mg, 2 mmol). The system was stirred at room temperature for 1 hour. After quenching reaction with methanol, the reaction system was concentrated and purified on a silica gel column (petroleum ether: ethyl acetate=4:2) to obtain compound 24(199 mg, 65%).
[0209] Step 2: Compound 24 (153 mg, 0.5 mmol) was weighed and dissolved in 10 mL of methanol. Iron (300 mg) and concentrated hydrochloric acid (0.5 ml) were added to the above system. The reaction system was diluted with 10 ml of water and stirred vigorously at 80? C. for 1 hour. After filtering and neutralizing with sodium bicarbonate, the reaction system was filtered ad concentrated. Compound 25 (55 mg, 40%) was obtained by silica gel column purification (petroleum ether: ethyl acetate 2:1).
[0210] Step 3: Compound 25 (55 mg, 0.2 mmol) was weighed and dissolved in 5 mL of methanol/water=1:1. LiOH (10 mg, 0.42 mmoL) was added to the above reaction system, which was stirred at room temperature for 4 hours. Compound 26 (44.6 mg, 90%) was obtained by concentrating and purifying on a silica gel column (petroleum ether: ethyl acetate=1:1).
[0211] Step 4: Compound 26 (5.6 mg, 0.0225 mmol) was weighed and dissolved in 100 ?L of DMF, HATU (8.5 mg, 0.0225 mmol), compound 19 (8.5 mg, 0.0225 mmol), and DIPEA (7.83 ?L, 0.045 mmol) were added to the above reaction system in sequence, and reacted at 37? C. for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound 27 (24 mg, 80%). HRMS, calculated for C.sub.71H.sub.108N.sub.12O.sub.14 [M+H].sup.+ 1353.8186, [M+2H].sup.2+ 677.413, found 1353.8172), 677.4121
[0212] Step 5: Compound 27 (13.2 mg, 0.01 mmol) was weighed and dissolved in 1 mL of methanol, 5 equivalent of hydroxylamine hydrochloride and sodium bicarbonate at a ratio of 1:1(dissolved in 0.5 mL of water) were added to the above reaction system, and reacted under stirring at 65? C. for 24 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound D2 (13 mg, 94%). HRMS, calculated for C.sub.71H.sub.111N.sub.13O.sub.15 [M+H].sup.+ 1386.8401, [M+2H].sup.2+ 693.9235, found 1386.8395, 693.9264
Example 16: Synthesis of Compound D3
[0213] The structure and synthesis method of compound D3 are as follows:
##STR00078## ##STR00079## ##STR00080##
[0214] Step 1: Compound 28 (574 mg, 1.65 mmoL), compound 29 (237.4 mg, 1.65 mmoL), and DMAP (201.4 mg, 1.65 mmoL) were weighed and dissolved in 10 mL of anhydrous dichloromethane. The reaction system was cooled on ice to 0? C. DCC (337.4 mg. 1.638 mmoL) was added to the above solution, which was stirred at 0? C. for 30 minutes, returned to room temperature, and stirred for 6 hours. The solution was diluted with dichloromethane and filtered, washed with 1N HCl and saturated brine, and the organic layer was dried over MgSO.sub.4, and dried by rotary evaporation. The obtained oily substance was redissolved in 30 mL of anhydrous ethanol and refluxed for 4 hours. Compound 30 (560 mg, yield 81%) was obtained by silica gel column purification (hexane:ether=10:1).
[0215] Step 2: Compound 30 (499 mg, 1.24 mmoL), ethyl hydrazinylacetate hydrochloride (191 mg, 1.23 mmoL) were weighed and dissolved in 10 mL of ethanol, added with triethylamine (17.3 ?L, 0.124 mmoL), and reacted at 50? C. for 2 hours. The reaction system was concentrated and purified by a silica gel column (hexane:ether=1:1) to obtain compound 31 (402 mg, yield 71%).
[0216] Step 3: Compound 31 (236 mg, 0.5 mmoL) was weighed and dissolved in 10 mL of THF:MeOH:Water=2:3:1. LiOH (25 mg, 1.04 mmoL) was added to the above system and stirred for 4 hours, 40 mL of water and 40 mL of ether were poured into the above system, the water layer was adjusted to pH 2, and washed with dichloromethane. The organic layer was dried over anhydrous magnesium sulfate, concentrated, and purified by a silica gel column (dichloromethane:methanol=4:1) to obtain compound 32 (160 mg, yield 72%).
[0217] Step 4: Compound 32 (50 mg, 112.6 ?mol) was weighed and dissolved in 200 ?L of DMF. DCC (34.7 mg, 168.7 ?mol) and NHS (19.4 mg, 168.7 ?mol) were added to the above system, and reacted at 37? C. for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound 33 (55 mg, yield 90.3%).
[0218] Step 5: Compound 35 (CH.sub.3O-PEG.sub.24-COOH, 50 mg, 43 ?mol) was weighed in a 25 mL round bottom flask, dissolved in 2 mL of anhydrous dichloromethane, added with two drops of dichlorosulfoxide dropwise, and refluxed at 50? C. for about 2 hours under nitrogen protection. When the reaction was complete as analyzed by thin layer chromatography using a developing agent of methanol and dichloromethane in a ratio of 1:8, the reaction system was dried by rotary evaporation, vacuum-pumped with an oil pump for 30 minutes, ensuring that the reaction system was free of dichlorosulfoxide.
[0219] Step 6: Compound 34 (Fmoc Lys OH, 16 mg, 43 ?mol/L) and NaHCO.sub.3 (18 mg, 215 ?mol/L) were weighed in a round bottom flask, and dissolved in 900 ?L tetrahydrofuran and 300 ?L pure water such that it became clear.
[0220] Step 7: The system obtained by drying the solution from the first step under rotary evaporation was weighed and dissolved in 400 ?L anhydrous tetrahydrofuran, the resultant was slowly added to the reaction system in step 2 in an ice bath with stirring, and reacted at room temperature for 30 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound 36 (42 mg, yield 63.6%). HRMS, calculated for CH.sub.73H.sub.126N.sub.2O.sub.3 [M+H].sup.+ 1511.8473, [M+2H].sup.2+ 756.4275, found 1511.8401, 756.4233.
[0221] Step 8: Compound 36 (10 mg, 6.62 ?mol) and HATU (5 mg, 13.24 ?mol) were weighed and dissolved in 100 ?L of anhydrous DMF. Compound 19 (NH.sub.2-VC-PAB-MMAE, 8.2 mg, 7.28 ?mol) was added to the above reaction system, adding DIPEA (3.44 ?L, 20 ?mol) dropwise with stirring, and the reaction was carried out at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound 37 (15 mg, yield 87%). HRMS, calculated for C.sub.131H.sub.218N.sub.12O.sub.41 [M+2H].sup.2+ 1308.7745, [M+3H].sup.3+ 872.852. found 1308.7761, 872.8542.
[0222] Step 9: Compound 37 (15 mg, 3.8 ?mol) was weighed and dissolved in 160 ?L of DMF, 40 ?L of piperidine was added to the above reaction system and stirred at room temperature for 20 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound 38 (12.8 mg, yield 92%). HRMS, calculated for C.sub.116H.sub.208N.sub.12O.sub.39 [M+2H].sup.2+ 1197.7405, [M+3H].sup.3+ 798.8293, found 1197.7375. 798.8234.
[0223] Step 10: Compound 33 (2.9 mg, 5.37 ?mol) was weighed and dissolved in 100 ?L of DMF. Compound 38 (12.8 mg, 5.37 ?mol) and triethylamine (1.5 ?L, 10.74 ?mol) were added to the above reaction system, and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by IC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound 39 (12 mg, yield 80%). HRMS, calculated for C.sub.142H.sub.230N.sub.14O.sub.41S [M+2H].sup.2+ 1410.8105, [M+3H].sup.3+ 940.876, found 1410.8123, 940.8771
[0224] Step 11: Compound 39 (39 mg, 4.28 ?mol) was weighed and dissolved in 130 ?L of dichloromethane, then the reaction system was cooled to 0? C. 10 ?L of water, 10 ?L of triisopropylsilane, and 80 ?L of trifluoroacetic acid were added to the above reaction system, and stirred at room temperature for 30 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound D3 (6 mg, yield 54.7%). HRMS, calculated for C.sub.123H.sub.216N.sub.14O.sub.41S [M+2H].sup.2+ 1289.756, [M+3H].sup.3+ 860.173, found 1289.7552, 860.1741
Example 17: Synthesis of Compound D4
[0225] The structure and synthesis method of compound D4 are as follows:
##STR00081## ##STR00082##
[0226] Step 1: Compound 33 (11.6 mg. 21.4 ?mol) was weighed and dissolved in 100 ?L of DMF. Compound 19 (20 mg, 17.8 ?mol) and triethylamine (3 ?L, 21.4 ?mol) were added to the above reaction system, and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound 40 (25 mg, yield 90%). HRMS, calculated for C.sub.84H.sub.116N.sub.12O.sub.14S [M+2H].sup.2+ 775.4305, found 775.4331.
[0227] Step 2: Compound 40 (20 mg, 12.9 ?mol) was weighed and dissolved in 130 ?L of dichloromethane, then the reaction system was cooled to 0? C. 10 ?L of water, 10 ?L of triisopropylsilane, and 80 ?L of trifluoroacetic acid were added to the above reaction system, and stirred at room temperature for 30 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound D4 (12.8 mg, yield 76%). FIRMS, calculated for C.sub.65H.sub.102N.sub.12O.sub.14S [M+H].sup.+ 1307.7437, found 1307.7437
Example 18: Synthesis of Compound D5
[0228] The structure and synthesis method of compound D5 are as follows:
##STR00083## ##STR00084##
[0229] Compound 38 (12.8 mg. 5.38 ?mol) was weighed and dissolved in 200 ?L of DMF. Compound 41 (BCN-O-PNP, 3.38 mg, 10.76 ?mol) and triethylamine (1.5 ?L, 10.76 ?mol) were added thereto, and let stand at 37? C. for 3 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative C18 column, followed by freeze drying to obtain compound D5 (10 mg, yield 72.7%). HRMS, calculated for C.sub.127H.sub.220N.sub.12O.sub.41 [M+2H].sup.2+ 1285.7825, [M+3H].sup.3+ 857.524, found 1285.7848, 857.5232.
Example 19: Synthesis of Compound D6
[0230] The structure and synthesis method of compound D6 are as follows:
##STR00085##
[0231] Step 1: Compound 36 (21 mg, 13.93 ?mol) and HATU (10.6 mg, 27.86 ?mol) were weighed and dissolved in 100 ?L of anhydrous DMF. Compound 42 (MMAE, 10 mg, 13.93 ?mol) and DIPEA (7.26 mL, 41.79 ?mol) were added to the above reaction system, and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound 43 (26 mg, yield 84.7%). HRMS, calculated for C.sub.112H.sub.191N.sub.7O.sub.36 [M+2H].sup.2+ 1106.174, [M+3H].sup.3+ 737.785, found 1106.1722, 737.7832
[0232] Step 2: Compound 43 (26 mg, 11.76 ?mol) was weighed and dissolved in 160 ?L, of DMF, 40 ?L of piperidine was added to the above reaction system and stirred at room temperature for 20 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound 44 (21 mg, yield 90%). HRMS, calculated for C.sub.97H.sub.181N.sub.7O.sub.34 [M+2H].sup.2+ 995.14, found 995.1442
[0233] Step 3: Compound 45 (DBCO-COOH, 3.5 mg, 10.56 ?mol) and HATU (8 mg, 21.12 ?mol) were weighed and dissolved in 100 ?L of anhydrous DMF, Compound 44 (21 mg, 10.56 ?mol) and DIPEA (5.5 ?L, 31.68 ?mol) were added to the above reaction system, and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound D6 (20.2 mg, yield 84%). HRMS, calculated for C.sub.118H.sub.198N.sub.8O.sub.36 [M+2H].sup.2+ 1152.7033, [M+3H].sup.3+ 768.8048, found 1152.7022, 768.8031.
Example 20: Synthesis of Compound D7
[0234] The structure and synthesis method of compound D7 are as follows:
##STR00086## ##STR00087##
[0235] Compound 45 (DBCO-COOH, 1.8 mg, 5.38 ?mol) and HATU (4.1 mg, 10.76 ?mol) were weighed and dissolved in 100 ?L of anhydrous DMF. Compound 38 (12.8 mg, 5.38 ?mol) and DIPEA (2.8 ?L, 16.14 ?mol) were added to the above reaction system, and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by using a semi preparative column, followed by freeze drying to obtain compound D7 (12 mg, 84%). HRMS, calculated for C.sub.137H.sub.225NI.sub.3O.sub.41 [M+2H].sup.2+ 1355.3039, [M+3H].sup.3+ 903.8718, found 1355.302, 903.8707.
Example 21: Synthesis of Compound D8
[0236] The structure and synthetic method of compound D8 are as follows:
##STR00088## ##STR00089##
[0237] Step 1: Compound 49 (maltotetraose. 20 mg, 30 ?moL) was weighed and dissolved in 600 ?L of ddH.sub.2O, and sodium azide (% mg, 1.5 mmoL) and CDMBI (32.4 mg, 150 ?mol) were added to the above reaction system, which was then placed on ice and cooled to 0? C. Potassium phosphate (96 mg, 450 ?mol) was then added and reacted at 0? C. for 4 h to generate compound 50. The reaction system was not processed, and stored at ?80? C. after aliquoting for use.
[0238] Step 2: Compound 46 (6 mg, 17.9 ?moL) was weighed and dissolved in 100 ?L of DMF. HATU (13.6 mg, 35.8 ?moL), compound 19 (NH.sub.2-VC-PAB-MMAE, 20 mg, 17.9 ?moL) and DIPEA (0.88 mL, 53.7 ?moL) were added in sequence to the above reaction system and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain Compound 47 (21 mg, yield 82%). HRMS calculated for C.sub.78H.sub.109N.sub.11O.sub.15 [M+2H].sup.2+ 720.913, found 720.9121.
[0239] Step 3: Compound 47 (21 mg, 14.58 ?mol) was weighed and dissolved in 80 ?L of DMF, 20 ?L of piperidine was added to the above reaction system, and reacted at room temperature for 20 min. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column to obtain Compound 48 (16 mg, yield 90%). HRMS calculated for C.sub.63H.sub.99N.sub.11O.sub.13 [M+H].sup.+ 1218.7502, [M+2H].sup.2+ 609.879, found 1218.7552, 609.8776.
[0240] Step 4: Preparation of Cu (I)-BTTAA solution: 32.5 ?L of 60 mM CuSO.sub.4, 39 ?L of 300 mM BTTAA and 286 ?L of 0.9M aodium ascorbate were mixed in turn for use.
[0241] Step 5: Compound 48 (16 mg, 13.1 ?moL) was added to the reaction system in step 1 (calculated by 100% yield, compound 50 (17.9 mg, 25.9 ?moL)), mixed well and then the whole volume of Cu(I)-BTTAA solution in step 4 was added thereto and reacted at 37? C. for 4 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 51 (20 mg, yield 80%). HRMS calculated for C.sub.87H.sub.140N.sub.14O.sub.33 [M+2H].sup.2+ 955.493, found 955.4887.
[0242] Step 6: Compound 45 (DBCOCOOH, 3.5 mg, 10.47 ?moL) was weighed and dissolved in 100 ?L of DMF. HATU (8 mg, 20.94 ?moL), compound 51 (20 mg, 10.47 ?mol) and DIPEA (5.46 mL, 31.41 ?mol) were added to the above reaction system in sequence and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound D8 (21 mg, yield 91%). HRMS calculated for C.sub.108H.sub.157N.sub.15O.sub.35 [M+2H].sup.2+ 1113.0562, [M+3H].sup.3+ 742.3734, found 1113.0505, 742.3704.
Example 22: Synthesis of Compound D9
[0243] The structure and synthetic method of compound D9 are as follows:
##STR00090## ##STR00091##
[0244] Step 1: Compound 52 (SH-DM1, 20 mg, 27.13 ?mol) was weighed and dissolved in 100 ?L of DMF, compound 53 (SMCC, 9 mg, 27.13 ?mol) was added to the above reaction system, and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 54 (24 mg, yield 82.7%). HRMS calculated for C.sub.51H.sub.66ClN.sub.5O.sub.16S [M+H].sup.+ 1072.3992, found 1072.3966.
[0245] Step 2: Compound 54 (SMCC-DM1, 24 mg, 22.4 ?moL) was weighed and dissolved in 100 ?L, of DMF compound 55 (DBCO-NH.sub.2, 6.2 mg, 22.4 ?mol) and triethylamine (6.3 ?L, 44.8 ?mol) were added to the above reaction system and reacted at 37? C. for 1 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound D9 (20 mg, yield 72.6%). HRMS calculated for C.sub.65H.sub.77ClN.sub.6O.sub.14S [M+H].sup.+ 1233.4985, [M+2H].sup.2+ 617.253, found 1233.4923, 617.2555.
Example 23: Synthesis of Compound D10
[0246] The structure and synthetic method of compound D10 are as follows:
##STR00092##
[0247] Compound 56 (0.6 mg, 6.12 mol) was weighed and dissolved in 100 ?L of DMF. HATU (4.1 mg, 10.7 ?mol) was added to the above reaction system and mixed well, and then compound 38 (12.8 mg, 5.35 ?mol) and DIPEA (2.8 ?L, 16.05 ?mol) were added in sequence and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound D10 (10 mg, yield 75.6%). HRMS calculated for C.sub.121H.sub.212N.sub.12O.sub.40 [M+2H].sup.2+ 1237.7535, [M+3H]3+ 825.505, found 1237.7532, 825.5060.
Example 24: Synthesis of Compound D11
[0248] The structure and synthetic method of compound D11 are as follows:
##STR00093## ##STR00094##
[0249] Step 1: Compound 86 (8.24 mg, 0.0356 mmol) was weighed and dissolved in 82.4 ?L of DMF, HATU (13.6 mg, 0.0356 mmol), compound 19 (20 mg, 0.0178 mmol) and DIPEA (9.34 ?L, 0.0536 mmol) were added to the above reaction system in sequence and reacted at 37? C. for 2 h. When the reaction was almost complete as monitored by LC-MS, 107 ?L of triethylamine was added, mixed well and reacted at room temperature for 15 min. The resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze dried to obtain compound 87 (20.8 mg, yield 92%). HRMS, calculated for C.sub.64H.sub.105N.sub.11O.sub.15; [M+H].sup.+ 1268.787, found 1268.7815.
[0250] Step 2: Compound 87 (20.8 mg. 0.0164 mmol) was weighed and dissolved in 208 ?L of DMF, and compound 41 (10.35 mg, 0.0328 mmol) and triethylamine (9.13 ?L, 0.0657 mmol) were added thereto and reacted at 37? C. for 2 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze dried to obtain compound D11 (14.7 mg, yield 62%). HRMS, calculated for C.sub.75H.sub.117N.sub.11O.sub.17 [M+H].sup.+ 1444.8707, found 1444.8662.
Example 25: Synthesis of Compound D12
[0251] The structure and synthetic method of compound D12 are as follows:
##STR00095## ##STR00096##
[0252] Step 1: Compound 88 (10.68 mg, 0.0267 mmol) was weighed and dissolved in 106.8 ?L of DMF, HATU (20.34 mg, 0.0534 mmol), compound 19 (30 mg, 0.0267 mmol) and DIPEA (9.34 ?L, 0.0802 mmol) were added to the above reaction system in sequence and reacted at 37? C. for 2 h. When the reaction was almost complete as monitored by LC-MS, 156 ?L of triethylamine was added, mixed well and reacted at room temperature for 15 min. The resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze dried to obtain compound 89 (31.1 mg, yield 90.7%). HRMS, calculated for C.sub.65H.sub.107N.sub.11O.sub.15 [M+H].sup.+ 1282.8026, found 1282.8041.
[0253] Step 2: The above product compound 89 (31.1 mg, 0.0234 mmol) was weighed and dissolved in 208 ?L of DMF, and compound 41 (10.35 mg, 0.0351 mmol) and triethylamine (9.13 ?L, 0.0936 mmol) were added and reacted at 37? C. for 2 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze dried to obtain compound D12 (28.5 mg, yield 83.5%). HRMS, calculated for C.sub.76H.sub.119N.sub.11O.sub.17 [M+H].sup.+ 1458.8864, found 1458.8792.
Example 26: Synthesis of Compound D13
[0254] The structure and synthetic method of compound D13 are as follows:
##STR00097##
[0255] Compound DBCO-PEG.sub.4-COOH (9.8 mg. 17.8 ?mol) was weighed and dissolved in 100 ?L of DMF, and HATU (13.5 mg, 35.6 ?moL), MMAE (12.8 mg, 17.8 ?moL) and DIPEA (18.6 ?L, 106.8 ?moL) were added to the above system and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze dried to obtain compound D13 (15.8 mg, yield 71%). HRMS, calculated for C.sub.69H.sub.101N.sub.7O.sub.14 [M+H].sup.+ 1252.7485, found 1252.7479.
III: Synthesis of Disaccharide-Small Molecule Drug Conjugates DG-1 to DG5 and dDG-1
Example 27: Synthesis of Compound DG-1
[0256] The structure and synthesis method of compound DG-1 are as follows:
##STR00098## ##STR00099##
[0257] Step 1: Compound D1 (10 mg, 8.5 ?moL) was weighed and dissolved in 100 ?L, of DMF, and compound 2 (3.3 mg, 8.5 ?moL) was weighed and dissolved in 100 ?L of 0.2 M PB, pH 7.5 buffer. The above two systems were mixed and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 57 (10 mg, yield 74%). HRMS calculated for C.sub.74H.sub.118N.sub.12O.sub.24 [M+2H].sup.2+ 780.4265, found 780.4221.
[0258] Step 2: Compound 57 (10 mg, 6.4 ?moL) was weighed and dissolved in 100 mL of DMF/50 mM PB, pH 7.5=1:1. CDMBI (6.9 mg, 32 moL) was added to the above system, mixed well and cooled to 0? C. on ice. Potassium phosphate (20.4 mg, 96 ?mol) was added and reacted at 0? C. for 12 h. A cyclized product was generated as monitored LC-MS, which was separated and purified by an alkaline semi-preparative C18 column to obtain compound DG-1 (7.2 mg, yield 72%). HRMS calculated for C.sub.74H.sub.116N.sub.12O.sub.23 [M+2H].sup.2+ 771.4215, found 771.4221.
Example 28: Synthesis of Compound DG-2
[0259] The structure and synthesis method of compound DG-2 are as follows:
##STR00100## ##STR00101##
[0260] Step 1 Compound 38 (20 mg, 8.36 ?mol) was weighed and dissolved in 100 ?L of DMF, compound 58 (13.6 mg, 41.8 ?mol) and triethylamine (3.5 ?L, 25.1 ?mol) were added to the above system, and reacted at 37? C. for 2 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 59 (18 mg, yield 83%). HRMS calculated for C.sub.125H.sub.217N.sub.13O.sub.44 [M+2H].sup.2+ 1303.2645, [M+3H].sup.3+ 869.1792, Found 1303.2667, 869.1799.
[0261] Step 2: Compound 59 (18 mg, 6.9 ?moL) was weighed and dissolved in 100 ?L of DMF, compound 5 (2.64 mg, 6.9 ?moL) and triethylamine (2.9 ?L, 20.8 ?moL) were added to the above reaction system, and reacted at room temperature for 3 h. Compound 5 (2.64 mg, 6.9 ?mol) was further added, and the reaction was continued at room temperature for 3 h. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preperative C18 column, followed by freeze drying to obtain compound 60 (14.2 mg, yield 71%). HRMS calculated for C.sub.135H.sub.238N.sub.14O.sub.51 [M+3H].sup.3+ 718.9193 Found 958.2233, 718.9192.
[0262] Step 3: Compound 60 (14.2 mg, 4.95 ?moL) was weighed and dissolved in 100 ?L of 50 mM PB, pH 7.5. CDMBI (5.4 mg, 24.8 ?moL) was added to the above reaction system, mixed well. After standing, it was cooled to 0? C. on ice, and then potassium phosphate (15.8 mg, 74.25 ?mol) was added thereto and reacted at 0? C. for 12 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline semi preparative C18 column, followed by freeze drying to obtain compound DG-2 (10 mg, yield 70.5%). HRMS calculated for C.sub.135H.sub.236N.sub.14O.sub.50 [M+3H].sup.3+ 952.2196, found 952.2112.
Example 29: Synthesis of Compound DG-3
[0263] The structure and synthesis method of compound DG-3 are as follows:
##STR00102## ##STR00103##
[0264] Step 1: Compound 3g (20 mg, 8.36 ?moL) was weighed and dissolved in 100 ?L of DMF/0.2M PB, pH 6.0=1:1, compound 2 (9.6 mg, 25.1 ?moL) was added to the above reaction system, which was adjusted to pH 6.0 with NaOH/HCl, then sodium cyanoborohydride (5.3 mg, 83.6 ?moL) was added thereto and reacted at 37? C. for 3 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 61 (18 mg, yield 78.3%). HRMS calculated for C.sub.130H.sub.231N.sub.13O.sub.49 [M+3H].sup.3+ 920.5406, found 920.5353.
[0265] Step 2: Compound 61 (18 mg, 6.53 ?moL) was weighed and dissolved in 100 ?L of 50 mM PB, pH 7.5=1:1, CDMBI (7 mg, 32.63 ?moL) was added to the above reaction system, mixed well, and then cooled to 0? C. on ice. Potassium phosphate (20.8 mg. 98 mol) was added and reacted at 0? C. for 12 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline C18 column, followed by freeze drying to obtain compound DG-3 (11 mg, yield 61.5%). HRMS calculated for C.sub.130H.sub.229N.sub.13O.sub.48 [M+3H].sup.3+ 914.537, found 914.5310.
Example 30: Synthesis of Compound DG-4
[0266] The structure and synthesis method of compound DG-4 are as follows:
##STR00104## ##STR00105##
[0267] Step 1: Compound 54 (10 mg, 9.3 ?moL) was weighed and dissolved in 100 ?L of DMF, compound 5 (3.6 mg, 9.3 ?moL) and triethylamine (3.8 ?L, 27.9 ?mol) were added to the above system, and reacted at 37? C. for 2 h. After compound 5 (3.6 mg, 9.3 ?mol) was added, the reaction was continued at 37? C. for 2 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 62 (10 mg, 80%). HRMS calculated for C.sub.61H.sub.85ClN.sub.6O.sub.22S [M+2H].sup.2+ 670.2694, found 670.2669.
[0268] Step 2: Compound 62 (10 mg, 7.47 ?moL) was weighed and dissolved in 100 ?L of DMF/50 mM PB, pH 7.5, CDMBI (8 mg, 37.35 ?moL) was added to the above reaction system, mixed well and then the reaction system was cooled to 0? C. on ice, and potassium phosphate (23.8 mg, 112 ?mol) was added and reacted at 0? C. for 12 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline C18 column, followed by freeze drying to obtain compound DG-4 (7 mg, yield 71%). HRMS calculated for C.sub.61H.sub.85ClN.sub.6O.sub.22S [M+2H].sup.2+ 661.2641, found 661.2660.
Example 31: Synthesis of Compound DG-5
[0269] The structure and synthesis method of compound DG-5 are as follows:
##STR00106##
[0270] Step 1. Compound 52 (20 mg, 27.12 ?mol) was weighed and dissolved in 200 ?L of DMF, compound 63 (6.5 mg, 27.12 ?mol) and 100 ?L of 0.2 M Na.sub.2HPO.sub.4 were added to the above system, and reacted at room temperature for 2 h. After the reaction was almost complete as monitored by LC-MS, 200 ?L of 1% NaOH was added to the above system, the reaction solution changed from light yellow to light red. The reaction was complete after 1 h. The resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 64. (19 mg, 78%). HRMS calculated for C.sub.41H.sub.58ClN.sub.5O.sub.13S [M+H].sup.+ 896.3518, found 896.3533.
[0271] Step 2: Compound 64 (19 mg, 21.2 ?moL) was weighed and dissolved in 400 ?L of DMF/0.2M PB, pH 6.0=1:1, compound 2 (32.3 mg, 84.8 ?mol) was added to the above reaction system, which was adjusted to pH 6.0 with NaOH/HCl, then sodium cyanoborohydride (10.7 mg, 169.6 ?mol) was added, and the reaction was carried out at 37? C. for 3 h. The reaction was almost complete as monitored by LC-MS. The resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 65 (20 mg, yield 75%). HRMS calculated for C.sub.55H.sub.81ClN.sub.6O.sub.23S [M+2H].sup.2+ 631.2459, found 631.2424.
[0272] Step 3: Compound 65 (20 mg, 15.86 ?moL) was weighed and dissolved in 500 ?L of 50 mM PB, pH 7.5, CDMBI (17.2 mg, 79.3 ?moL) was added to the above reaction system, mixed well and then the reaction system was cooled to 0? C. on ice, and then potassium phosphate (50.5 mg, 237.9 ?mol) was added thereto and reacted at 0? C. for 12 h. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline C18 column, followed by freeze drying to obtain compound DG-5 (12.6 mg, yield 64%). HRMS calculated for C.sub.55H.sub.79ClN.sub.6O.sub.2S [M+2H].sup.2+ 622.2406, found 622.2409.
Example 32: Synthesis of Compound DG-6
[0273] ##STR00107## ##STR00108##
[0274] Step 1: Compound 19 (10 mg, 8.9 ?moL) was weighed and dissolved in 100 ?L of DMF, compound 2 (13.8 mg, 35.6 ?moL) was weighed and dissolved in 100 ?L of 0.2 M PB3, pH 6.0 buffer. After the pH of the reaction system was 6.0 as detected, NaCNBH.sub.3 (5.3 mg, 89 ?mol) was added, and the reaction system was mixed well, and reacted at 37? C. for 2 h. When most product was generated as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 70 (10 mg, yield 75.4%). HRMS calculated for C.sub.72H.sub.117N.sub.11O.sub.22 [M+2H].sup.230 744.9187, found 744.9110.
[0275] Step 2: Compound 70 (10 mg. 6.7 ?moL) was weighed and dissolved in 100 ?L of DMF/50 mM PB, pH 7.5=1:1, CDMBI (7.2 mg, 33.5 ?mol) was added to the above system, mixed well and cooled to 0? C. on ice, and then potassium phosphate (21.4 mg, 100.5 ?mol) was added thereto and reacted at 0? C. for 12 h. As monitored by LC-MS, the reaction was almost complete to generate a cyclized product, which was separated and purified by an alkaline semi preparative C18 column, followed by freeze drying to obtain compound DG-6 (7.2 mg, yield 73.4%). HRMS calculated for C.sub.72H.sub.115N.sub.11O.sub.21 [M+2H].sup.2+ 735.9134, found 735.9133.
Example 33: Synthesis of Compound DG-7
[0276] ##STR00109## ##STR00110##
[0277] Step 1: Compound 71 (Fmoc-VA-PAB-OH, 20 mg, 38.8 ?moL) was weighed and dissolved in 400 ?L of DMF, and compound (PNP).sub.2O (23.6 mg, 77.6 ?moL) was weighed and dissolved in the above mixture system, and 3.2 ?L of DIPEA was added thereto, mixed well and reacted overnight at room temperature. As monitored by LC-MS, most product was generated, which was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 72 (23 mg, yield 87%). HRMS calculated for C.sub.37H.sub.37N.sub.5O.sub.8 [M+H].sup.+ 680.272, found 680.2712.
[0278] Step 2: Compound 72 (23 mg, 33.8 ?moL) was weighed and dissolved in 400 ?L of DMF, MMAE (24.3 mg, 33.8 ?moL) was added to the above system, mixed well and HOBt (0.92 mg, 6.76 ?mol) and 82 ?L of pyridine were added thereto and reacted at room temperature for 12 h. As monitored by LC-MS, reaction was almost complete to generate a cyclized product, which was separated and purified by an alkaline semi-preparative C18 column to obtain compound 73 (35.3 mg, yield 83%). HRMS calculated for C.sub.70H.sub.98N.sub.8O.sub.13 [M+2H].sup.2+ 630.3705. found 630.3701.
[0279] Step 3: Compound 73 (30 mg, 23.8 ?mol) was weighed and dissolved in 100 ?L of DMF, 20 ?L of piperidine was added to the above reaction system, and reacted at mom temperature for 20 min. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain Compound 74 (22.9 mg, yield 93%). HRMS calculated for C.sub.55H.sub.88N.sub.8O.sub.11 [M+H].sup.+ 1037.6651, found 1037.6559.
[0280] Step 4: Compound 74 (22.9 mg, 22.1 ?mol) was weighed and dissolved in 100 ?L of DMF, and compound 2 (34.2 mg, 88.4 ?moL) was weighed and dissolved in 100 ?L of 0.2 M PB, pH 6.0 buffer, then adding to the above system. After the pH of the reaction system was 6.0 as detected, NaCNBH.sub.3 (131.6 mg, 221 ?mol) was added thereto. The reaction system was mixed well and reacted at 37? C. for 6 h. As monitored by LC-MS, most product was generated, which was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain Compound 75 (23.5 mg, yield 76%). HRMS calculated for C.sub.69H.sub.111N.sub.9O.sub.21 [M+2H].sup.2+ 701.9025, found 701.9022.
[0281] Step 5: Compound 75 (10 mg, 6.7 ?moL) was weighed and dissolved in 100 ?L of DMF/50 mM PB, pH 7.5=1:1, CDMBI (7.6 mg, 35.5 ?mol) was added to the above system, mixed well and cooled to 0? C. on ice. Potassium phosphate (22.7 mg, 106.5 ?mol) was added thereto and reacted at 0? C. for 12 h. As monitored by LC-MS, reaction was almost complete to generate a cyclized product, which was separated and purified by an alkaline semi-preparative C18 column to obtain compound DG-7 (6.8 mg, yield 69%). HRMS calculated for C.sub.69H.sub.109N.sub.9O.sub.20 [M+2H].sup.2+ 692.8973. found 692.8910.
Example 34: Synthesis of Compound dDG-1
[0282] The structure and synthetic method of compound dDG-1 are as follows:
##STR00111## ##STR00112## ##STR00113##
[0283] Step 1: Compound 5 (10 mg, 26.17 ?mol) was weighed and dissolved in a 500 ?L of CH.sub.3OH/H.sub.2O=1:4 system. 1H-imidazole sulfonyl azide hydrochloride (8.2 mg, 39.3 ?mol), potassium carbonate (10.9 mg, 78.6 ?mol), and copper sulfate (6.2 mg, 39.3 ?mol) were added to the above reaction system, and reacted at 37? C. for 4 hours. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by a P2 column, followed by freeze drying to obtain compound 6 (9 mg, yield 85%).
[0284] Step 2: Preparation of Cu (I)BTTAA solution: 55 ?L of 60 mM CuSO.sub.4, 66 ?L of 300 mM BTTAA, and 490 ?L of 0.9M sodium ascorbate were mixed well for use.
[0285] Step 3: Compound 6 (9 mg, 22 ?mol) was weighed and dissolved in a 50 ?L of 50 mM PB, pH 7.5 buffer. Compound 46 (7.4 mg, 22 ?mol) was added to the above reaction system, mixed well, and then added with all volumes of Cu (I)BTTAA solution from step 2 and reacted at 37? C. for 4 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 67 (14.2 mg, yield 88%).
[0286] Step 4: Compound 67 (14.2 mg, 19.1 ?mol) was weighed and dissolved in 100 ?L of DMF. HATU (14.6 mg, 38.2 ?mol), compound 19 (21.5 mg, 19.1 ?mol), and DIPEA (10 ?L, 57.3 ?mol) were added to the above reaction system, and reacted at 37? C. for 2 hours. After the reaction was complete as monitored by LC-MS, 20 ?L of piperidine was added. After 15 minutes. LC-MS showed that the reaction was complete. Compound 68 (26 mg, yield 83%) was obtained by freeze-drying after separation and purification on a semi preparative C18 column.
[0287] Step 5; Compound 68 (20 mg, 12.3 ?mol) was weighed and dissolved in 100 ?L of DMF. Compound 54 (SMCC-DM1, 13.2 mg, 12.3 ?mol) and triethylamine (5 ?L, 36.9 ?mol) were added to the above reaction system, and reacted at 37? C. for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 69 (24 mg, yield 76%).
[0288] Step 6: Compound 69 (24 mg, 9.3 ?mol) was weighed and dissolved in 100 ?L of DMF/50 mM PB, pH 7. =1:1. CDMBI (10 mg, 46.5 ?mol) was added to the above reaction system, mixed well, and cooled to 0? C. on ice, and potassium phosphate (29 mg, 139.5 ?mol) was added and reacted at 0? C. for 12 hours. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline C18 column, followed by freeze drying to obtain compound dDG-1 (15.5 mg, yield 65%).
Example 35: Synthesis of Compound dDG-2
[0289] ##STR00114## ##STR00115## ##STR00116##
[0290] Step 1: Compound 34 (Fmoc Ly OH, 20 mg, 54.3 ?mol) was weighed and dissolved in 200 ?L of DMF. Compound 17 (11.82 mg, 59.8 ?mol) and 22.6 ?L of trimethylamine were added to the above system, mixed well, and reacted at room temperature for 2 hours. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 76 (22.5 mg, yield 92%). HRMS calculated for C.sub.23H.sub.25N.sub.5O.sub.5 [M+H].sup.+ 452.1934, found 452.1991
[0291] Step 2: Compound 76 (20 mg, 44.3 ?mol) and HATU (33.5 mg, 88.6 ?mol) were weighed and dissolved in 100 ?L of anhydrous DMF. Compound 19 (NH.sub.2-VC-PAB-MMAE, 49.9 mg, 44.3 ?mol) was added to the above reaction system, added with DIPEA (22.8 ?L, 132.9 ?mol) dropwise with stirring, and reacted at room temperature for 1 hour. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative column, followed by freeze drying to obtain compound 77 (60 mg, yield 88%) HRMS, calculated for C.sub.81H.sub.117N.sub.15O.sub.16 [M+2H].sup.2+ 1778.9479, found 778.9479, found 778.9477.
[0292] Step 3: Compound 77 (20 mg, 12.8 ?mol) was weighed and dissolved in 100 ?L of DMF. 20 ?L of piperidine was added to the above reaction system, and reacted at room temperature for 20 minutes. When the reaction was complete as monitored by LC-MS, the resultant was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 78 (15.8 mg, yield 92%). HRMS calculated for C.sub.66H.sub.107N.sub.15O.sub.14 [M+2H].sup.2+ 667.9139, found 667.9140.
[0293] Step 4: Compound 78 (15.8 mg, 11.8 ?mol) was weighed and dissolved in 100 ?L of DMF, and compound 2 (18.3 mg, 47.2 ?mol) was weighed and dissolved in 100 ?L of 0.2 M PB, pH 6.0 buffer, and added to the above system. After the pH of the reaction system was 6.0 as detected, NaCNBH.sub.3. (70.3 mg, 118 ?mol) was added thereto. The reaction system was mixed well and reacted at 37? C. for 6 hours. As monitored by LC-MS, most product was generated, which was separated and purified by a semi preparative C18 column, followed by freeze drying to obtain compound 79 (15 mg, yield 75%). HRMS calculated for C.sub.80H.sub.130N.sub.16O.sub.24 [M+2H].sup.2+ 850.48, found 850.4721.
[0294] Step 5: Compound 79 (10 mg, 5.9 ?mol) was weighed and dissolved in 100 ?L of DMF/50 mM PB, pH 7.5=1:1, CDMBI (6.7 mg, 31.2 ?mol) was added to the above system, mixed well, and cool to 0? C. on ice. Potassium phosphate (20 mg, 93.7 ?mol) was added thereto and reacted at 0? C. for 12 hours. A cyclized product was generated as monitored LC-MS, which was separated and purified by an alkaline semi-preparative C18 column to obtain compound dDG-2 (7 mg, yield 71%). HRMS calculated for C.sub.69H.sub.109N.sub.9O.sub.20 [M+2H].sup.2+ 842.4747, found 842.4721.
Example 36: Synthesis of Compound dDG-3
[0295] ##STR00117## ##STR00118##
[0296] Step 1: Compound 82 (6 mg, 0.0162 mml) was weighed and dissolved in 60 ?L of DMF, HATU (17.9 mg, 0.0486 mmol), compound 19 (33 mg, 0.0292 mmol), and DIPEA (8.86 ?L, 0.0649 mmol) were sequentially added to the above reaction system, and reacted at room temperature for 2 hours. As monitored by LC-MS, the reaction was almost complete, and 128.5 ?L of trimethylamine was added, mixed well and reacted at room temperature for 15 minutes. The resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze-dried to obtain compound 91 (21.5 mg, yield 57.15%). HRMS, calculated for C.sub.121H.sub.193N.sub.21O.sub.26 [M+2H].sup.2+ 1179.2291, [M+3H].sup.3+ 786.4887, found 1179.221178.484.
[0297] Step 2: Compound 91 (21.5 mg, 9.12 ?mol) was weighed and dissolved in 210 ?L of DMF, CHO-LacNAc (10.44 mg, 0.0273 mmoL) was added to the above reaction system, and DMF was added such that DMF/0.2M PH=1:1. The pH of the reaction system was adjusted to 6.0 using NaOH/HCl, and then sodium cyanide borohydride (5.74 mg, 0.0912 mmoL) was added and reacted at room temperature for 3-4 hours. The reaction is almost complete as monitored by LC-MS. The resultant was separated and purified by a semi preparative C18 column, and the target product was collected and freeze-dried to obtain compound 92 (10.5 mg, yield 50.5%). HRMS, calculated for C.sub.135H.sub.216N.sub.22O.sub.36 [M+2H].sup.2+ 13617952, [M+3H].sup.3+ 908.1994 found 1361.7889, 908.1909.
[0298] Step 3: Compound 92 (10.5 mg, 3.86 ?mol) was weighed and dissolved in 210 ?L of DMF/H.sub.2O-1:1, DMC (13 mg, 32.63 ?moL) and triethylamine (32.2 ?L, 0.231 mmol) were added to the above reaction system, which was mixed well, cooled to 0? C. on ice and reacted for 2 hours. When the reaction was almost complete as monitored by LC-MS, the resultant was separated and purified by an alkaline C18 column, and the target product was collected and freeze-dried to obtain compound dDG-3 (7.1 mg, yield 68%). HRMS, calculated for C.sub.135H.sub.214N.sub.22O.sub.35 [M+2H].sup.2+ 1352.7899, [M+3H].sup.3+ 902.1959, found 1352.7881, 902.1932.
IV: Synthesis of Glycoengineered Antibodies Ab-1 to Ab-19
Example 37: Synthesis of Ab-1
[0299] The non-natural glycoengineered antibody Ab-1 was obtained from compound G1 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146536.
Example 38: Synthesis of Ab-2
[0300] The non-natural glycoengineered antibody Ab-2 was obtained from compound G2 and the wild-type antibody Herceptin through general operation 1.
Example 39: Synthesis of Ab-3
[0301] The non-natural glycoengineered antibody Ab-3 was obtained from compound G3 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146702.
Example 40: Synthesis of Ab-4
[0302] The non-natural glycoengineered antibody Ab-4 was obtained from compound G4 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146699.
Example 41: Synthesis of Ab-5
[0303] The non-natural glycoengineered antibody Ab-5 was obtained from compound G5 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146170.
Example 42: Synthesis of Ab-6
[0304] The non-natural glycoengineered antibody Ab-6 was obtained from compound G6 and the wild-type antibody Herceptin through general operation 1.
Example 43: Synthesis of Ab-7
[0305] The non-natural glycoengineered antibody Ab-7 was obtained from compound G7 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146642.
Example 44: Synthesis of Ab-8
[0306] The non-natural glycoengineered antibody Ab-8 was obtained from compound G8 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146642.
Example 45: Synthesis of Ab-9
[0307] The non-natural glycoengineered antibody Ab-9 was obtained from compound G9 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146701.
Example 46: Synthesis of Ab-10
[0308] The non-natural glycoengineered antibody Ab-10 was obtained from compound G10 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 147218.
Example 47: Synthesis of Ab-11
[0309] The non-natural glycoengineered antibody Ab-11 was obtained from compound G11 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 146831.
Example 48: Synthesis of Ab-12
[0310] The non-natural glycoengineered antibody Ab-12 was obtained from compound G12 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 147120.
Example 49: Synthesis of Ab-13
[0311] The non-natural glycoengineered antibody Ab-13 was obtained from compound G13 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 147110.
Example 50: Synthesis of Ab-14
[0312] The non-natural glycoengineered antibody Ab-14 was obtained from compound G14 and the wild-type antibody Herceptin through general operation 1. The HRMS measured value after deconvolution is 147152.
Example 51: Synthesis of Ab-15
[0313] The non-natural glycoengineered antibody Ab-15 was obtained from compound G3 and the defucosylated antibody Herceptin through general operation 2. The HRMS measured value after deconvolution is 146423.
Example 52: Synthesis of Ab-16
[0314] The non-natural glycoengineered antibody Ab-16 was obtained from compound G8 and the defucosylated antibody Herceptin through general operation 2. The HRMS measured value after deconvolution is 146362.
Example 53: Synthesis of Ab-17
[0315] The non-natural glycoengineered antibody Ab-17 was obtained from compound G10 and the defucosylated antibody Herceptin through general operation 2. The HRMS measured value after deconvolution is 146939.
Example 54: Synthesis of Ab-18
[0316] The non-natural glycoengineered antibody Ab-18 was obtained from compound G12 and the defucosylated antibody Herceptin through general operation 2. The HRMS measured value after deconvolution is 146819.
Example 55: Synthesis of Ab-19
[0317] The non-natural glycoengineered antibody Ab-19 was obtained from compound G13 and the defucosylated antibody Herceptin through general operation 2.
V: Synthesis of Glycosite-Specific Antibody-Drug Conjugates gsADC-1 to gsADC-43
Example 56: Synthesis of gsADC-1 (gsADC Means Sugar Site-Specific Antibody-Drug Conjugate)
[0318] Antibody-drug conjugate gsADC-1 was obtained from compound D2 and non-natural glycoengineered antibody Ab-2 through general operation 4.
Example 57: Synthesis of gsADC-2
[0319] Antibody-drug conjugate gsADC-2 was obtained from compound D1 and non-natural glycoengineered antibody Ab-2 through general operation 5. The HRMS measured value after deconvolution is 148892.
Example 58: Synthesis of gsADC-3
[0320] Antibody-drug conjugate gsADC-3 was obtained from compound D3 and non-natural glycoengineered antibody Ab-2 through general operation 6.
Example 59: Synthesis of gsADC-4
[0321] Antibody-drug conjugate gsADC-4 was obtained from compound D4 and non-natural glycoengineered antibody Ab-2 through general operation 6.
Example 60: Synthesis of gsADC-5
[0322] Antibody-drug conjugate gsADC-5 was obtained from compound D6 and non-natural glycoengineered antibody Ab-3 through general operation 7. The FIRMS measured value after deconvolution is 151464.
Example 61: Synthesis of gsADC-6
[0323] Antibody-drug conjugate gsADC-6 was obtained from compound D7 and non-natural glycoengineered antibody Ab-3 through general operation 7.
Example 62: Synthesis of gsADC-7
[0324] Antibody-drug conjugate gsADC-7 was obtained from compound D8 and non-natural glycoengineered antibody Ab-3 through general operation 7.
Example 63: Synthesis of gsADC-8
[0325] Antibody-drug conjugate gsADC-8 was obtained from compound D9 and non-natural glycoengineered antibody Ab-3 through general operation 7.
Example 64: Synthesis of gsADC-9
[0326] Antibody-drug conjugate gsADC-9 was obtained from compound D6 and non-natural glycoengineered antibody Ab-4 through general operation 7.
Example 65: Synthesis of gsADC-10
[0327] Antibody-drug conjugate gsADC-10 was obtained from compound D7 and non-natural glycoengineered antibody Ab-4 through general operation 7.
Example 66: Synthesis of gsADC-11
[0328] Antibody-drug conjugate gsADC-11 was obtained from compound D8 and non-natural glycoengineered antibody Ab-4 through general operation 7.
Example 67: Synthesis of gsADC-12
[0329] Antibody-drug conjugate gsADC-12 was obtained from compound D9 and non-natural glycoengineered antibody Ab-4 through general operation 7.
Example 68: Synthesis of gsADC-13
[0330] Antibody-drug conjugate gsADC-13 was obtained from compound D6 and non-natural glycoengineered antibody Ab-6 through general operation 7.
Example 69: Synthesis of gsADC-14
[0331] Antibody-drug conjugate gsADC-14 was obtained from compound D7 and non-natural glycoengineered antibody Ab-6 through general operation 7.
Example 70: Synthesis of gsADC-15
[0332] Antibody-drug conjugate gsADC-15 was obtained from compound D8 and non-natural glycoengineered antibody Ab-6 through general operation 7.
Example 71: Synthesis of gsADC-16
[0333] Antibody-drug conjugate gsADC-16 was obtained from compound D9 and non-natural glycoengineered antibody Ab-6 through general operation 7.
Example 72: Synthesis of gsADC-17
[0334] Antibody-drug conjugate gsADC-17 was obtained from compound D6 and non-natural glycoengineered antibody Ab-9 through general operation 7.
Example 73: Synthesis of gsADC-18
[0335] Antibody-drug conjugate gsADC-18 was obtained from compound D7 and non-natural glycoengineered antibody Ab-9 through general operation 7.
Example 74: Synthesis of gsADC-19
[0336] Antibody-drug conjugate gsADC-19 was obtained from compound D8 and non-natural glycoengineered antibody Ab-9 through general operation 7.
Example 75: Synthesis of gsADC-20
[0337] Antibody-drug conjugate gsADC-20 was obtained from compound D9 and non-natural glycoengineered antibody Ab-9 through general operation 7.
Example 76: Synthesis of gsADC-29
[0338] Antibody-drug conjugate gsADC-29 was obtained from compound D13 and non-natural glycoengineered antibody Ab-3 through general operation 7.
Example 77: Synthesis of gsADC-21
[0339] Antibody-drug conjugate gsADC-21 was obtained from compound D5 and non-natural glycoengineered antibody Ab-3 through general operation 8. The HRMS measured value after deconvolution is 151832.
Example 78 Synthesis of gsADC-39
[0340] Antibody-drug conjugate gsADC-39 was obtained from compound D11 and non-natural glycoengineered antibody Ab-3 through general operation 8. The HRMS measured value after deconvolution is 149589.
Example 79: Synthesis of gsADC-41
[0341] Antibody-drug conjugate gsADC-41 was obtained from compound D12 and non-natural glycoengineered antibody Ab-3 through general operation 8. The HRMS measured value after deconvolution is 149617.
Example 80: Synthesis of gsADC-22
[0342] Antibody-drug conjugate gsADC-22 was obtained from compound D5 and non-natural glycoengineered antibody Ab-4 through general operation 8. The HRMS measured value after deconvolution is 151833.
Example 81: Synthesis of gsADC-23
[0343] Antibody-drug conjugate gsADC-23 was obtained from compound D5 and non-natural glycoengineered antibody Ab-6 through general operation 8.
Example 82: Synthesis of gsADC-24
[0344] Antibody-drug conjugate gsADC-24 was obtained from compound D5 and non-natural glycoengineered antibody Ab-9 through general operation 8.
Example 83: Synthesis of gsADC-42
[0345] Antibody-drug conjugate gsADC-42 was obtained from compound D11 and non-natural glycoengineered antibody Ab-14 through general operation 8. The HRMS measured value after deconvolution is 152801.
Example 84: Synthesis of gsADC-43
[0346] Antibody-drug conjugate gsADC-43 was obtained from compound D5 and non-natural glycoengineered antibody Ab-15 through general operation 8.
Example 85: Synthesis of gsADC-25
[0347] Antibody-drug conjugate gsADC-25 was obtained from compound D10 and non-natural glycoengineered antibody Ab-3 through general operation 9.
Example 86: Synthesis of gsADC-26
[0348] Antibody-drug conjugate gsADC-26 was obtained from compound D10 and non-natural glycoengineered antibody Ab-4 through general operation 9.
Example 87: Synthesis of gsADC-27
[0349] Antibody-drug conjugate gsADC-27 was obtained from compound D10 and non-natural glycoengineered antibody Ab-6 through general operation 9.
Example 88: Synthesis of gsADC-28
[0350] Antibody-drug conjugate gsADC-28 was obtained from compound D10 and non-natural glycoengineered antibody Ab-9 through general operation 9.
Example 89: Synthesis of gsADC-30
[0351] Antibody-drug conjugate gsADC-30 was obtained from compound DG-1 and wild-type antibody Herceptin through general operation 3. The HRMS measured value after deconvolution is 148892.
Example 90: Synthesis of gsADC-31
[0352] Antibody-drug conjugate gsADC-31 was obtained from compound DG-2 and wild-type antibody Herceptin through general operation 3.
Example 91: Synthesis of gsADC-32
[0353] Antibody-drug conjugate gsADC-32 was obtained from compound DG-3 and wild-type antibody Herceptin through general operation 3.
Example 92: Synthesis of gsADC-33
[0354] Antibody-drug conjugate gsADC-33 was obtained from compound DG-4 and wild-type antibody Herceptin through general operation 3.
Example 93: Synthesis of gsADC-34
[0355] Antibody-drug conjugate gsADC-34 was obtained from compound DG-5 and wild-type antibody Herceptin through general operation 3. The HRMS measured value after deconvolution is 148295.
Example 94: Synthesis of gsADC-35
[0356] Antibody-drug conjugate gsADC-35 was obtained from compound DG-6 and wild-type antibody Herceptin through general operation 3. The HRMS measured value after deconvolution is 148751.
Example 95: Synthesis of gsADC-36
[0357] Antibody-drug conjugate gsADC-36 was obtained from compound DG-7 and wild-type antibody Herceptin through general operation 3. The HRMS measured value after deconvolution is 148576.
Example 96: Synthesis of gsADC-37
[0358] Antibody-drug conjugate gsADC-37 was obtained from compound dDG-1 and wild-type antibody Herceptin through general operation 3.
Example 97: Synthesis of gsADC-38
[0359] Antibody-drug conjugate gsADC-38 was obtained from compound DG-6 and defucosylated antibody Herceptin through general operation 10. The HRMS measured value after deconvolution is 148448.
VI: Screening of Sugar Substrates and Endoglycosidases
Preparation of sugar oxazoline
[0360] Different sugar substrates (1 equivalent, including monosaccharide, disaccharide and trisaccharide structures) were weighed and dissolved in 50 mM PB, pH 7.0 buffer, CDMBI (5 equivalents) was added to the above system, mixed well and cooled to 0? C. Potassium phosphate (15 eq) was added, the final concentration of the sugar substrates in the reaction system was 10 mM, and the reaction was carried out at 0? C. for 2 h. Plenty of precipitate was observed, which was removed by centrifugation. The supernatant was oxazoline substrates G1, G12, G15-G20 containing salts, which were directly used for the next step of screening.
Synthesis of Compound G15
[0361] ##STR00119##
[0362] HRMS, calculated for C.sub.8H.sub.13NO.sub.5 [M+H].sup.+ 204.0872. found 204.0809. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 6.01 (d, J=7.3 Hz. 1H), 4.04 (ttd, J=6.2, 4.4, 3.9, 2.4 Hz, 1H), 3.90 (t. J=3.6 Hz, 1H), 3.74-3.70 (m, 1H), 3.60 (dd, J=12.5, 6.3 Hz, 1H), 3.57-3.51 (m, 1H), 3.29 (ddd, J=8.9, 6.3, 2.5 Hz, 1H), 1.97-1.95 (m, 3H).
Synthesis of Compound G16
[0363] ##STR00120##
[0364] HRMS, calculated for C.sub.8H.sub.13NO.sub.5 [M+H].sup.+ 204.0872, found 204.0859. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 6.00 (d, J=7.2 Hz, 0.85H), 5.14 (d, J=3.7 Hz, 0.15H), 4.02-3.97 (m, 1H), 3.86-3.84 (m, 1H), 3.81 (ddd, J=7.0, 4.9, 1.8 Hz, 1H), 3.76 (td, J=7.1, 1.3 Hz, 1H), 3.70-3.59 (m, 2H). 1.94 (d, J=1.3 Hz, 3H).
Synthesis of Compound G17
[0365] ##STR00121##
[0366] HRMS, calculated for C.sub.16H.sub.26N.sub.2O.sub.10 [M+H].sup.+ 407.1665, found 407.1636, .sup.1H NMR (600 MHz, Deuterium Oxide) ? 6.00 (d, J=7.3 Hz, 1H), 4.49 (d, J=8.4 Hz, 1H), 4.33 (dd, J=3.2, 1.6 Hz, 1H), 4.11 (ddp, J=6.7, 3.5, 1.7 Hz, 1H). 3.84 (dd, J=12.5, 2.1 Hz, 1H), 3.69 (dd, J=12.5, 5.0 Hz, 1H), 3.63-3.54 (m, 3H), 3.53-3.45 (m, 2H), 3.42-3.34 (m, 2H), 3.20 (ddd, J=8.9, 6.5, 2.4 Hz, 1H), 1.98-1.94 (m, 6H).
Synthesis of Compound G18
[0367] ##STR00122##
[0368] HRMS, calculated for C.sub.24H.sub.39N.sub.3O.sub.15 [M+H].sup.+ 610.2459, found 610.2451. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 5.99 (d, J=7.3 Hz, 1H), 4.52-4.45 (m, 2H), 4.34-4.32 (m, 1H), 4.10 (ddq. J=7.0, 3.3, 1.8 Hz, 1H), 3.85-3.20 (m, 16H), 2.00-1.90 (m, 9H).
Synthesis of Compound G19
[0369] ##STR00123##
[0370] HRMS, calculated for C.sub.25H.sub.40N.sub.2O.sub.18 [M+H].sup.+ 657.2354, found 657.2351. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 5.97 (d, J=7.3 Hz, 1H). 4.39 (d, J=7.8 Hz, 1H), 3.96 (dd, J=9.8, 3.2 Hz, 1H), 3.83 (d, J=3.2 Hz, 1H), 3.79-3.32 (m, 17H), 2.51 (I H), 1.97-1.90 (m, 6H). 1.67 (t, J=12.1 Hz, 1H).
Synthesis of Compound G20
[0371] ##STR00124##
[0372] HRMS, calculated for C.sub.20H.sub.33NO.sub.14 [M+H].sup.+ 512.1979, found 512.1966. .sup.1H NMR (600 MHz, Deuterium Oxide) ? 6.01 (d, J=7.3 Hz, 1H), 5.10 (d. J=4.0 Hz, 1H), 4.38 (dd, J=3.0, 1.2 Hz, 1H), 4.34 (d. J=7.8 Hz, 1H), 4.28-4.24 (m, 1H), 4.11 (q. J=6.5 Hz, 1H), 3.96 (dt, J=8.7, 1.4 Hz, 1H), 3.84-3.32 (m, 121H), 1.98 (d, J=1.8 Hz, 3H), 1.12 (3H).
Screening of Endoglycosidases
[0373] G14, deglycosylated antibody (Fuc ?1,6) GlcNAc-Herceptin and different endoglycosidases were sequentially added to 50 mM Tris-HCl, pH 7.2 buffer, such that the final concentrations of each were 1.5 mM, 5 mg/mL and 0.2 mg/mL, respectively, which was incubated at 30? C. for 3 h for detection by mass spectrometry. At the same time, a control group without endoglycosidase was set to eliminate the influence of non-enzymatic reactions. According to the screening conditions, a total of ten endoglycosidases were screened, namely Endo-S, Endo-S D233Q, Endo-S2, Endo-S2 D184M, Endo-F3, Endo-F3 D165A, Endo-D, Endo-D Q431A, Endo-D N322Q and Endo-A. It was found that Endo-S2 had weak transfer activity only for G14, and the transfer yield was about 5.6%, as shown in
Screening of Sugar Substrates
[0374] Oxazoline substrates (G1, G12, G15-G20), deglycosylated antibody (Fuc ?1.6) GlcNAc-Herceptin and endoglycosidase Endo-S2 were sequentially added to 50 mM Tris-HCl, pH 7.2 buffer, such that the final concentrations of each were 1.5 mM, 5 mg/mL, and 0.2 mg/mL, respectively, which was incubated at 30? C. for 3 h for detection by mass spectrometry. At the same time, a control group without endoglycosidase was set to eliminate the influence of non-enzymatic reactions. The results show that Endo-S2 could recognize G1 and its transfer efficiency to the deglycosylated antibody was as high as 68%; G12 obtained by introducing sialic acid to position 6 of galactose of G1 could also be well recognized by Endo-S2; while for the sugar substrates G19 and G20 which were modified at position 3 of galactose or at position 3 of N-acetylglucosamine, the transfer activity of Endo-S2 was greatly reduced; other sugar structures could not be well recognized, either. As shown in
Pharmacological Example 1
[0375] Experimental Process of In Vitro Activity and Data Result Analysis
[0376] To evaluate the activity of some disaccharide ADCs above at the cell level, three cell lines were selected, among which SK-Br-3 cells and NCI-N87 cells were Her2-positive cells. MDA-MB-231 was Her2-negative cells, and MIT was used to test the cellular viability and toxicity of ADC molecules. The specific operation was performed as follows: 100 ?L of PBS was added to the outermost circle of the 96-well plate, another three wells were selected to add medium only, and the remainders were added with about 6000 corresponding cells for each well, and the plate was incubated overnight in a CO.sub.2 incubator at 37? C. 10 ?L of each ADC molecule was added (various ADC molecules were diluted 5-fold from the highest concentration of 100 nM, a total of 9 concentrations were diluted, and each concentration had 3 replicate wells), in each 96-well plate, the remaining 3 wells were plated with cells and another 3 wells were added with only 10 ?L of medium as the control group and the blank group, and the %-well plate was incubated in a CO.sub.2 incubator at 37? C. for 72 h. After adding 10 ?L of 5 mg/mL MTT to each well, it was incubated at 37? C. for 4 h, then 90 ?L of SDS lysate was added to each well, and incubated at 37? C. for 7 h to fully lyse the cells. Finally, the OD value of each well at 570 nm was measured, the data was processed by GraphPad Prism 6, and the results are shown in
[0377] In
##STR00125##
[0378] It can be seen from the results in
Pharmacological Example 2
[0379] Experimental process and result analysis of anti-tumor activity in vivo Gastric cancer cell NCI-N87 was used to construct a BALB/c nude mouse xenograft tumor model, and the mice were divided into large, medium and small groups by ear hole markings, with five mice in each group.
[0380] Four disaccharide ADC compounds gsADC-21, gsADC-30, gsADC-35 and gsADC-36 were evaluated for animal level activity, Cys random conjugated ADC compound (DAR?4) was used as positive control, and PBS was used as negative control. All samples were diluted to 0.2 mg/mL with 1?PBS before administration, and sterilized with a 0.22 mm filter membrane before use.
[0381] All samples were intraperitoneally administered at a concentration of 3 mg/kg, administered once every three days, and administered three times in total. The tumor size and mouse body weight were measured every three days using a caliper after the first administration. The experimental process complied with animal ethics requirements. The measured data were plotted and analyzed using GraphPad Prism 6 software. As shown in