BIOSENSORS
20190144924 ยท 2019-05-16
Assignee
Inventors
Cpc classification
C12Q1/6818
CHEMISTRY; METALLURGY
C12Q2565/107
CHEMISTRY; METALLURGY
C12Q1/6818
CHEMISTRY; METALLURGY
International classification
Abstract
Provided are molecular entities capable of transforming, aggregating or assembling into a three dimensional biosensors.
Claims
1-43. (canceled)
44. A biosensor comprising: a peptide moiety; and a moiety capable of altering fluorescence emission, the moiety comprising at least one metal ion, the biosensor being associated with at least one probe molecule having a fluorescent label, the probe molecule being selected to partially or fully interact with at least one target molecule.
45. The biosensor according to claim 44, being in a form selected from tubular structure; fibrilar structures; spheres; joint spherical structures; spherical aggregates; distorted spherical aggregates; linear, two-dimensional or three-dimensional arrays; and single molecule forms.
46. The biosensor according to claim 44, self-assembled into a three dimensional form in solution.
47. The biosensor according to claim 44, wherein the peptide comprises an amino acid is selected amongst alanine, arginine, asparagine, aspartic acid, cysteine, glutamic acid, glutamine, glycine, histidine, isoleucine, leucine, lysine, methionine, phenylalanine, proline, serine, threonine, tryptophan, tyrosine valine, pyrrolysine and selnocysteine, or an amino acid analog selected from homo-amino acids, N-alkyl amino acids, dehydroamino acids, aromatic amino acids and ,-disubstituted amino acids.
48. The biosensor according to claim 44, wherein the peptide comprises an aromatic amino acid.
49. The biosensor according to claim 44, wherein the peptide moiety comprises an amino acid selected from phenylalanine (Phe) and glycine (Gly).
50. The biosensor according to claim 49, wherein the peptide moiety comprises the amino acid motif Phe-Gly or Gly-Phe.
51. The biosensor according to claim 44, wherein the moiety capable of altering fluorescence emission is selected to modulate fluorescence emission from the florescence labeled probe molecule.
52. The biosensor according to claim 51, wherein modulation is selected from attenuation, quenching, enhancement, shift in wavelength, shift in polarity and changing fluorescence lifetime, or wherein modulation is by quenching, and wherein the moiety capable of altering fluorescence emission is a fluorescence quenching moiety.
53. The biosensor according to claim 52, wherein the fluorescence quenching moiety is selected from aliphatic amines, aromatic amines, halogenated moieties, and electron scavengers.
54. The biosensor according to claim 44, wherein the at least one metal ion is an electron scavenger.
55. The biosensor according to claim 54, wherein the metal is Cu or Cd or Pd or Mn or Eu or As or Cs or Zn or Hg or Ni or Co.
56. The biosensor according to claim 54, wherein the at least one metal ion is directly associated with an amino acid of the peptide moiety or with a ligand group associated with an amino acid of the peptide moiety.
57. The biosensor according to claim 44, wherein one or both of said probe molecule and target molecule is a nucleic acid.
58. The biosensor accordion to claim 57, wherein the probe molecule is a probe nucleic acid and the target molecule is a target nucleic acid.
59. The biosensor according to claim 58, wherein the probe nucleic acid is selected to hybridize to the target nucleic acid through a portion or portions of the probe sequence that are substantially complementary to a target nucleic acid sequence.
60. The biosensor according to claim 51, wherein the labelled probe molecule is at least one nucleic acid associated with a fluorescence label.
61. The biosensor according to claim 57, wherein the probe nucleic acid and the target nucleic acid are each, independently, selected from DNA, single stranded DNA (ssDNA), double-stranded DNA (dsDNA), cDNA; and RNA.
62. The biosensor according to claim 61, wherein the probe nucleic acid and the target nucleic acid are each, independently, selected from aptamers, ribonucleotides, deoxyribonucleotides, ribonucleotide polyphosphate molecules, deoxyribonucleotide polyphosphate molecules, peptide nucleotides, nucleoside polyphosphate molecules, metallonucleosides, phosphonate nucleosides and modified phosphate-sugar backbone nucleotides.
63. The biosensor according to claim 58, wherein the probe nucleic acid is dsDNA and the target nucleic acid is a ssDNA.
64. A method of determining the presence of at least one target nucleic acid in a sample, the method comprising: contacting said sample with at least one biosensor according to claim 44, permitting association between a probe molecule and the target nucleic acid in the sample; and measuring emission from the sample to determine the presence or absence of the at least one target nucleic acid in the sample; whereby an emission of fluoresce indicates the presence of at least one nucleic acid in the sample.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0075] In order to better understand the subject matter that is disclosed herein and to exemplify how it may be carried out in practice, embodiments will now be described, by way of non-limiting example only, with reference to the accompanying drawings, in which:
[0076]
[0077]
[0078]
[0079]
[0080]
[0081]
[0082]
[0083]
DETAILED DESCRIPTION OF EMBODIMENTS
Results and Discussion
Synthesis and Characterization
[0084] As depicted in
[0085] In addition, all UV-Vis absorption spectra of L and LM were recorded in order to detect the change in the optical spectral pattern of the peptide (L) in the presence and absence of the metal ion.
[0086] To trigger the self-assembly of L and LM, the two compounds were dissolved in different solvents having different polarities. First, the compound (either L or LM) was dissolved in 1,1,1,3,3,3-hexafluoro-2-propanol (HFP) to a concentration of 100 mg/mL. Then, each solution was diluted with methanol, 50% ethanol or water (Table 1). The polarized solvents (methanol<<50% ethanol<<water) allowed the peptides to self-assemble.
TABLE-US-00001 TABLE 1 The different self-assembly conditions for L and LM and the resulting assemblies Condition Compound Solvent Concentration Assemblies 1 L Methanol 2 or 3 mg/mL No distinct structures 2 L 50% 2 or 3 mg/mL Spheres Ethanol 3 L Water 2 or 3 mg/mL Distorted spherical aggregates 4 LM Methanol 2 or 3 mg/mL Spheres 5 LM 50% 2 or 3 mg/mL Joint Ethanol spherical structures 6 LM Water 2 or 3 mg/mL Spherical aggregates
[0087] High-resolution scanning electron microscopy (HR-SEM) analysis revealed that in methanol L did not form any distinct structures (
[0088] For further insights into the morphology of the self-assembled nanomeric spherical structures formed by L and LM under different conditions of solvents, transmission electron microscopy (TEM) analysis was performed. This analysis revealed a difference between the nanospheres formed under conditions 2 and 4; Table 1 (
[0089] AFM analysis further supported the results obtained by HR-SEM and TEM as different nanostructures formed by L and LM in different solvents. Under condition 2 (Table 1), the nanospheres formed by L in 50% ethanol had a height ranging from 5 nm to 32 nm. (
[0090] Overall, both L and LM formed spherical structures with diverse morphologies in solvents having different polarities. The self-assembly process is controlled by the molecular parameters of the peptide-based monomer, which depends on peptide-peptide and metal-peptide interaction energies that govern the stabilities and average size of the self-assembled structures.
[0091] The structural transformation of peptide assemblies is dependent on the solvent's polarity. This may have a potential implication on solvent-induced controlled molecular self-assembly. Water, which has the highest polarity, may lead to the formation of a stronger hydrogen binding network, which prompted transition of LM from individual nanospheres into fused spherical aggregates (
[0092] UV-vis absorption spectra of LM were also recorded in the different polar protic solvents, used for the self-assembly process. As the solvent's polarity increased, the absorption maximum of LM, corresponding to the intercomponent charge transfer transition, shifted towards longer wavelengths (327.fwdarw.347.fwdarw.364 nm) (
[0093] To obtain an insight into the secondary structure of the different self-assembled structures of LM formed in the different solvents, Fourier transform infrared (FT-IR) analysis was generated and each spectrum was deconvoluted. The FT-IR spectra of the spherical structures formed in methanol exhibited two major peaks at 1633 cm.sup.1 and 1685 cm.sup.1, indicating an anti-parallel -sheet structure (
[0094] The nature of the nanostructures formed by LM in water was further studied by X-ray powder diffraction (XRD) and compared to the assemblies in water formed by L. The XRD pattern indicated that both L and LM had amorphous and monoclinic crystalline structures. The XRD spectrum of LM exhibited sharp peaks along with the characteristic crystalline reflections in a wide range of 2 (2-40); however, the intensities of these characteristic peaks were comparatively lower for L. Furthermore, the crystalline area and degree of crystallinity (%) were lower for L (200.2, 13.07%) compared with LM (305.6, 22.89%). In addition, the crystallite size for L and LM was 109.6 nm and 119.3 nm, respectively. Taken together, these structural analyses suggest that these spherical structures are not well ordered. However, it is noted that the spherical aggregates formed by LM in water are stable for at least one month at room temperature and atmospheric pressure.
Optical Detection of DNA
[0095] Structures having aromatic moieties with electron systems can interact with biomolecules such as DNA and proteins. In addition, some metal ions such as Zn.sup.2+ and Cu.sup.2+ are usually used as coordination centers, which have intrinsic fluorescence quenching properties. The detection or sensing of biological samples under physiological conditions (such as aqueous medium) is of major importance. Furthermore, the quenching efficiency of LM in water (spherical aggregates)>LM in ethanol (connecting spheres)>LM in methanol (individual spheres). This result suggests that the spherical aggregates formed by LM in water have a larger surface area for the adsorption of the probe DNA. This leads to a higher quenching efficiency with better optical response. Previous reports also showed that the association of ssDNA/GO is much faster than SWCNT and CNPs due to the presence of a larger adsorption area. It is therefore assumed that the surface area of the self-assembled nanostructures and the charge properties of the ssDNA are the main contributors to the adsorption rate. Hence, it is considered the metal-peptide complex, LM, with its self-assembled network as a smart sensing platform comparable to several MOFs.
[0096] The self-assembled LM was utilized as a biosensor, where Cu.sup.2+ acted as a coordination center, the electron system mediated non-covalent bonding and fluorescein (FLC)-labeled ssDNA was used as a probe. The HIV-1U5 long terminal repeat sequence was used as the target analyte since early detection of HIV is highly important. Emission quenching was used as the basis for optical sensing.
[0097]
[0098] Since LM, the target and the probe DNA are water-soluble, the detection system is homogeneous. This type of homogeneous detection of nucleic acid with fluorescent probes has several natural advantages, such as ease of operation, rapid hybridization kinetics and potential compatibility with real-time monitoring and in situ cellular imaging.
[0099]
[0100] The ssDNA adsorption on the GO surface is very fast and reaches equilibrium within one minute. The release of the duplex from the GO surface with a maximum emission recovery occurs within 30 minutes with a lower detection limit (LOD) of 10 nM. The emission quenching of the dye-labelled ssDNA by SWCNT exhibits a rapid reduction in the first hour followed by a slow decrease over the subsequent 2-3 hr. The release of the duplex from the wall of CNT in the presence of the complementary target reaches a plateau after 3 hr with an LOD of 4 nM. The CNPs reaches about 82% fluorescence quenching within 30 minutes and DNA hybridization occurs at a rate comparable to ssDNA adsorption and yields the best fluorescence response after 40 minutes (LOD>10 nM). Cu(H.sub.2dtoa)-based MOF sensing of ssDNA has a quenching efficiency of 84.5% and the incubation time considered for maximum emission recovery is more than 4 hr with an LOD of 3 nM.
[0101] For better quantification of the target DNA, several factors were optimized, such as the incubation time and the dosage of LM. The effect of the dosage of LM was studied (
[0102]
(F.sub.TF.sub.M)/F.sub.M=0.0022C+0.0607, R=0.993,
[0103] where C is the concentration of the target DNA and R is the regression coefficient of the equation. Based on this method, the detection limit of the target ss-DNA was estimated to be 1.4 nmol L.sup.1 (defined as S/N=3). This detection limit is lower than those obtained by systems that rely on carbon nanostructures including SWNT, GO, CNPs platform and electrochemical-DNA sensors. The major limit of carbon-based nanomaterials such as SWCNT, GO, and CNPs is their lack of (or low) solubility in water. Therefore, sensing platforms that are based on these materials cannot support homogeneous detection of biomolecules. Homogeneous detection technique has potential compatibility in detecting lower concentrations of targeted molecules with better sensitivity and in-situ cellular imaging. Moreover, this detection system, which we propose, exhibits excellent reproducibility because the relative standard deviation (RSD) for parallel experiments of four newly prepared ss-DNA solutions (100 nmol L.sup.1) was only 6.1%.
[0104] Usually, DNA-intercalating dyes can interact in a non-specific manner with DNA fragments and proteins. This greatly limits the application of the intercalating dyes in DNA detection. To evaluate the specificity of the system, an attempt was made to detect a one-base mismatched DNA fragment (MT1). In the presence of MT1, the fluorescent recovery was low. This indicates lower (F.sub.T-F.sub.M)/F.sub.M owing to the existence of an unstable duplex conformation (
[0105] Moreover, when L was used instead of LM in this sensing system, an insignificant emission response of P1 was observed. This experimental observation suggests that the low optical response of P1 in the presence of L is attributed to the absence of Cu(II) from the network. Cu(II) in LM has a d.sup.9 electronic configuration that facilitates its binding to the probe DNA (P1), along with - stacking, and it quenches the fluorescence of FLC owing to the photoinduced electron transfer (PET) process. It is well known that Cu(II) complexes with free coordination sites efficiently quench the emission of fluorophores with the binding properties in molecular beacon oligonucleotide probes; this triggers PET. The advantage of these types of optical quenchers is their ability to interact reversibly with probe DNA through space or weak contact interactions. This makes the detection of targeted DNA by an optical sensing stand feasible. The results from these studies suggest that LM can differentiate between ssDNA and ds DNA. This does not only offer selective detection of DNAit may be possible to extend this optical sensing application to a wide spectrum of analytes by complementing LM with functional nucleic structures (e.g., aptamers). More importantly the emission quenching response of P1 after introducing LM in the presence of polyanions such as polyacrylic acid is comparable to that without polyacrylic acid. Further addition of increasing concentrations of T1 leads a steady increase in the emission recovery. This result suggests that this newly developed receptor sensing stand is stable and functions in the presence of polyanions such as polyacrylic acid.
Experimental Section
Materials
[0106] All chemicals and solvents are commercially available and were used as supplied unless otherwise stated Amino acids such as Phenylalanine and Glycine were purchased from Novabiochem (Darmstadt, Germany) Cu(ClO4).sub.2 was purchased from Sigma Aldrich (St Louis, Mo., USA). 2-(chloromethyl) pyridine hydrochloride was purchased from Sigma Aldrich (St Louis, Mo., USA), aniline, ethylenediamine and phosphoryl chloride were purchased from Merck (Darmstadt, Germany) (1-Hexadecyl) trimethyl ammonium chloride was purchased from Alfa Aser (Ward Hill, China), N,N-dicyclohexyl-carbodiimide, Di-tert-butyl dicaronate and 1,1,1,3,3,3-hexafluoro-2-propanol (HFP) were purchased from Alfa Aser (Heysham, England); hydroxybenzotriazole was purchased from Chem-Implex International (Wood Dale, Ill., USA). The following DNA sequences were synthesized by Sigma(Rehovot, Israel):
[0107] Probe DNA: 5-AGTCAGTGTGGAAAATCTCTAGC-FLC-3 (FLC=Fluorescein) Target DNA: 5-GCTAGAGATTTTCCACACTGACT-3 Single-base mismatch DNA: 5-GCTAGAGATTGTCCACACTGACT-3. The probe DNA (P1) is the complementary sequence of HIV-1 U5. The target DNA (T1) is the HIV-1 U5 sequence. Single-base mismatched DNA has a single-base mismatch in the underlined position.
Self-Assembly of L and LM
[0108] A fresh stock solution of L and LM was prepared by dissolving the lyophilised forms of L and LM in HFP to a concentration of 100 mg/mL. Then, we blended these peptides in several different proportions and diluted them in the desired solvent as indicated in Table 1. The polarized solvent allowed the molecules to self-assemble.
Preparation of the Complex Probe DNA-LM and Assay of the Target DNA
[0109] First, 1.0 mg of LM (which was previously self-assembled in water and dried) was dispersed in 1 mL triple distilled water (TDW) by sonication. Next, 27 L of this suspension were mixed with 50 nM probe DNA with oscillation at RT in order to obtain a symmetrical and limpid solution. The fluorescence intensity of the solution was detected; then different concentrations of the target DNA were added to the solution containing P1-LM complex with oscillation at 35 C. for 3 h (except for the time-course study). The complex obtained was used immediately to measure fluorescence. DNA fragments in buffer solutions were prepared by dissolving the DNA in 0.5 mM Tris-HCl buffer (pH 7.4, containing 100 mM NaCl and 5 mM MgCl.sub.2).
High-Resolution Scanning Electron Microscopy (HR-SEM)
[0110] A 10 L drop of the solution of either L or LM in the different solvents was placed on a glass cover slip and allowed to dry at RT. The substrates were then coated with gold using a Polaron SC7640 Sputter Coater. SEM analysis was performed using a high-resolution scanning electron microscope (HR-SEM, Serion equipped with X-MAX20 SDD Inca 450 EDS LN.sup.2 free detector) operating at 1 kV.
Transmission Electron Microscopy (TEM)
[0111] A 10 L drop of the solution of either L or LM in the different solvents was placed on a 200-mesh copper grid, covered by carbon-stabilized Formvar film (Electron Microscopy Science, PA, USA). After 1 min, excess fluid was removed from the grid. The samples were analysed using a Tecnai T12 G.sup.2 Spirit (Cryo-TEM) operating at 120 kV.
Atomic Force Microscopy Analysis
[0112] Topography images of the structures on glass cover slips were taken using JPK NanoWizard3 (JPK instruments, Germany) working in AC mode. Si.sub.3N.sub.4 cantilever probes with a spring constant of 3 Nm.sup.1 and a resonance frequency of 75 kHz were used.
Fourier Transform Infrared Spectroscopy (FT-IR)
[0113] Fourier transform infrared spectra were recorded using a Nicolet 6700 FT-IR spectrometer with a deuterated triglycine sulfate (DTGS) detector (Thermo Fisher Scientific, Mass., USA). The metal-peptide complex solutions were deposited on a CaF.sub.2 window and dried under vacuum. The peptide deposits were resuspended with D.sub.2O and subsequently dried to form thin films. The re-suspension procedure was repeated twice to ensure a maximal hydrogen-to-deuterium exchange. The measurements were taken using 4 cm.sup.-1 resolution and averaging 2000 scans. The transmittance minimal values were determined by the OMNIC analysis program (Nicolet).
UV-Vis Spectroscopy
[0114] UV-Vis absorption spectra of the monomeric form of L, LM in 1,1,1,3,3,3-hexafluoro-2-propanol (HFP) and the UV-Vis absorption spectra of self-assembled metallo peptides (LM) in the different solvents (methanol, 50% ethanol and water) were recorded using a UV/Vis spectrophotometer (SHIMADZU, UV-1650PC).
Fluorescence Spectroscopy
[0115] For the quantitative homogeneous detection of the target DNA, the fluorescence measurements were performed at RT using a fluorescent spectrometer (Perkin Elmer LS 55). The emission spectra were collected from 500 to 650 nm with an excitation wavelength of 494 nm. Both the excitation and emission slit widths were set to 5.0 nm. The fluorescence intensity at 521 nm was used for quantitative analysis. The quenching efficiency (Q.sub.E,%) was calculated by the formula: Q.sub.E=(1F.sub.M/F.sub.0)100%, where F.sub.M and F.sub.0 are fluorescence intensities at 521 nm in the presence and the absence of LM. The fluorescence recovery was calculated by the formula: RE=(F.sub.T/F.sub.M1)100%, where F.sub.T and F.sub.M are fluorescence intensities at 521 nm in the presence and the absence of the target DNA after introducing LM.
X-Ray Diffraction (XRD) Analysis
[0116] The phase of the product was identified by X-ray powder diffraction (X-Ray DiffractometerD8 Advance), using Cu K (=0.15406 nm) and a solid state NaI dynamic scintillation detector. The full Diffrac.sup.Plus package software was used for data acquisition, phase analysis, crystallography and thin film characterisation.
Dynamic Light Scattering (DLS) Analysis
[0117] Dynamic light scattering measurements of the assemblies were performed using a Nano-zeta sizer (Malvern instruments), model ZEN3600).
Peptides Synthesis:
[0118] Peptides were synthesized by conventional solution-phase methods. Peptide coupling was mediated by dicyclohexylcarbodiimide/1-hydroxybenzotriazole (DCC/HOBt). The products were purified by column chromatography using silica gel (100-200 mesh) as the stationary phase and an n-hexane-ethyl acetate mixture as an eluent. The final compounds were fully characterized by Bruker 500 MHz 1H-NMR spectroscopy, and mass spectroscopy (Applied Biosystems Voyager-DE Pro MALDI-TOF and Accela Autosampler, Thermo Scientific (CCQ Fleet)).
[0119] Synthesis of BOC Phe-OH: A solution of L-phenylalanine (3.30 g, 20 mmol) in a mixture of dioxane (40 mL), water (20 mL) and 1 M NaOH (20 mL) was stirred and cooled in an ice-water bath. Di-tertbutylpyrocarbonate (4.583 g, 21 mmol) was added and stirring continued at room temperature (RT) for 6 h. Then the solution was concentrated in vacuum to about 10-15 mL, cooled in an ice-water bath, covered with a layer of ethyl acetate (about 50 mL) and acidified with a dilute solution of KHSO4 to pH 2-3 (determined by Congo red). The aqueous phase was extracted with ethyl acetate and this was done repeatedly. The ethyl acetate extracts were pooled, washed with water, dried over anhydrous Na.sub.2SO.sub.4 and evaporated in a vacuum. The pure material was obtained as a waxy solid. Yield 4.45 g (16.8 mmol, 84.0%).
##STR00002##
[0120] Synthesis of NH.sub.2-Gly-OMe Hydrochloride: 4.5 g (60 mmol) of L-glycine was dissolved in 90 mL of MeOH and cooled in an ice bath. Then, 12 ml of SOCl2 was added dropwise and stirred for 8 h. The excess solvent was evaporated under rotary vacuum. The dried crystalline solid product obtained was L-glycine methyl ester hydrochloride. Yield 6.30 g (50.4 mmol, 85.0%).
[0121] Synthesis of BOC-Phe-Gly-OMe (1): 4.0 g (15 mmol) of Boc-Phe-OH was dissolved in 40 ml dry DCM in an ice-water bath. H-gly-OMe. HCl 2.507 g (20.0 mmol) and Et.sub.3N 4 ml, 30 mmol) were then added to the reaction mixture, followed immediately by the addition of 3.30 g (16.0 mmol) dicyclohexylcarbodiimide (DCC) and 2.16 g (16.0 mmol) of HOBt. The reaction mixture was allowed to warm-up to RT and was stirred for 48 h. DCM was evaporated and the residue was dissolved in ethyl acetate (60 mL). The dicyclohexylurea (DCU) was filtered off. The organic layer was washed with 2M HCl (350 mL), brine (250 mL), 1 M sodium carbonate (350 mL) and brine (250 mL) and finally dried over anhydrous sodium sulfate. It was then evaporated under vacuum to yield Boc-Phe-Gly-OMe as a white solid. The product was purified by silica gel (100-200 mesh) using n-hexane-ethyl acetate (3:1) as eluent. Yield: 3.65 g (10.85 mmol, 72.35%). .sup.1H NMR (CDCl.sub.3, 400 MHz, ppm): 7.31-7.28 (m, 2H, ArH of Phe), 7.23-7.20 (m, 3H, ArH of Phe), 6.52 (b, 1H, NH Phe), 5.05 (b, 1H, NH Gly), 4.42-4.41 (m, 1H, CH, Phe) 4.07-3.91 (dd, 2H, CH2-Gly), 3.73 (s, 3H, OMe), 3.14-3.05 (m, 2H, CH, Phe) 1.39 (s, 9H, Boc). ESI-MS (m/z): [M]=336.38 (calculated); 336.59 (observed), [M+Na+H]+=360.38 (calculated); 360.11 (observed); [M+K+H]+=376.38 (calculated); 376.29 (observed), [M+2Na]+=382. 38 (calculated); 381.21 (observed).
[0122] Synthesis of BOC-Phe-Gly-OH (2): To 3.0 g (8.91 mmol) of Boc-Phe-Gly-OMe, 30 mL MeOH and 2M 15 mL NaOH were added and the progress of saponification was monitored by thin layer chromatography (TLC). The reaction mixture was stirred. After 10 h, the methanol was removed under vacuum; the residue was dissolved in 50 mL of water and washed with diethyl ether (250 mL). Then, the pH of the aqueous layer was adjusted to 2 using 1M HCl and extracted with ethyl acetate (350 mL). The extracts were pooled, dried over anhydrous sodium sulfate and evaporated under vacuum to obtain the compound as a waxy solid. Yield: 2.72 g (8.46 mmol, 95%). .sup.1H NMR (DMSO-d.sub.6, 400 MHz, ppm): 12.56 (s, 1H, COOH), 8.23 (t, 1H, NH Gly), 7.27, 7.16 (m, 5H, ArH of Phe), 6.89 (d, 1H, NH Phe), 4.23-4.17 (m, 1H, CH, Phe) 3.86-3.72 (m, 2H, CH2 Gly), 3.03-2.69 (m, CH, Phe) 1.28 (s, 9H, Boc). ESI-MS (m/z): [M+Na+H]+=346.35 (calculated); 346.42 (observed); [M+K+H]+=362.35 (calculated); 362.37 (observed).
[0123] Synthesis of BOC-Phe-NHCH.sub.2CH.sub.2NH-Phe-Boc (3) and NH2-Phe-NHCH.sub.2CH.sub.2NH-Phe-NH.sub.2 (4): 3.0 g (11.27 mmol) of Boc-Phe-OH were dissolved in 40 ml dry DCM in an ice-water bath. Ethylenediamine (340 mg) (5.63 mmol) was then added to the reaction mixture, followed immediately by the addition of 2.79 g (13.5 mmol) dicyclohexylcarbodiimide (DCC) and 1.82 g (13.5 mmol) of HOBt. The reaction mixture was allowed to warm-up to RT and was stirred for 48 h. DCM was evaporated and the residue was dissolved in ethyl acetate (60 mL) and the dicyclohexylurea (DCU) was filtered off. The organic layer was washed with 2M HCl (350 mL), brine (250 mL), 1 M sodium carbonate (350 mL) brine (250 mL) and dried over anhydrous sodium sulfate; finally it was evaporated under vacuum to yield BOC-Phe-NHCH2CH2NH-Phe-Boc (3) as a white solid. The product was purified by silica gel (100-200 mesh) using n-hexane-ethyl acetate (4:1) as eluent. Yield: 2.04 g (3.61 mmol, 64.18%). .sup.1H NMR (CDCl.sub.13, 400 MHz, ppm): 7.34-7.30 (m, 3H, ArH of Phe), 7.19-7.17 (m, 2H, ArH of Phe), 5.77 (b, 1H, NH Phe), 5.10 (b, 1H, NH Ethelynediamine), 4.77-4.11 (m, 1H, CH, Phe) 3.18-3.16 (m, 2H, CH.sub.2-Ethylenediamine), 3.02-2.93 (m, 2H, CH Phe) 1.41 (s, 9H, Boc). ESI-MS (m/z): [M+Na+2H]+=579.67 (calculated); 579.74 (observed); [M+K+H]+=595.67 (calculated); 596.10 (observed).
[0124] Next, 2 g (3.60 mmol) of compound 3 were dissolved in 25 mL of DCM in an ice bath. Then, 6 mL of TFA were added and stirred for 2h. The progress of the reaction was monitored by TLC. After the reaction was completed, all solvents were evaporated in a rotary evaporator. The product was then dissolved in water, neutralized with NaHCO.sub.3 solution, extracted with ethyl acetate, dried over anhydrous sodium sulphate and evaporated by rotary evaporator to obtain an oily product 4, which was immediately used for the next reaction. Yield: 1.194 g (3.36 mmol, 93.6%). ESI-MS (m/z): [M+Na+2H]+=379.44 (calculated); 379.93 (observed); [M+2Na]+=400.44 (calculated); 400.25 (observed).
##STR00003##
[0125] Synthesis of BOC-Phe-Gly-Phe-NHCH.sub.2CH.sub.2NH-Phe-Gly-Phe-Boc (5) and NH.sub.2-Phe-Gly-Phe-NHCH.sub.2CH.sub.2NH-Phe-Gly-Phe-NH2 (6): 2.554 g (7.90 mmol) of Boc-Phe-Gly-OH were dissolved in 30 ml dry DCM in an ice-water bath. Compound 4 (1.274 g 3.6 mmol) was then added to the reaction mixture, followed immediately by the addition of 1.96 g (9.48 mmol) dicyclohexylcarbodiimide (DCC) and 1.28 g (9.48 mmol) of HOBt. The reaction mixture was allowed to warm-up to RT and stirred for 48 h. DCM was evaporated and the residue was dissolved in ethyl acetate (50 mL) and the dicyclohexylurea (DCU) was filtered off. The organic layer was washed with 2M HCl (350 mL), brine (250 mL), 1 M sodium carbonate (350 mL), brine (250 mL), dried over anhydrous sodium sulfate and evaporated in a vacuum to yield BOC-Phe-Gly-Phe-NHCH.sub.2CH.sub.2NH-Phe-Gly-Phe-Boc (5) as a white solid. The product was purified by silica gel (100-200 mesh) using n-hexane-ethyl acetate (4:1) as eluent. Yield: 2.09 g (2.20 mmol, 62.21%). .sup.1H NMR (DMSO-d.sub.6, 400 MHz, ppm): 8.11-8.05 (m, 2H, NH Phe and Gly), 7.28-7.23 (m, 8H, ArH Phe), 7.22-7.18 (m, 4H, ArH Phe), 6.97 (d, J=8.3 Hz, 1H, NH Phe), 4.46-4.42 (m, 1H, CH, Phe) 4.22-4.17 (m, 1H, CH Phe), 3.83-3.78 (dd, 1H, CH2 Gly), 3.69-3.63 (dd, 1H, CH2 Gly) 3.09-2.96 (m, 4H, CH Phe), 2.87-2.36 (m, 2H, CH.sub.2 EDA), 1.30 (s, 9H, Boc). ESI-MS (m/z): [M+2H]+=965.13 (calculated); 965.61 (observed); [M+H3O]+=982.13 (calculated); 982.60 (observed); [M+Na+H]+=987.14 (calculated); 987.44 (observed).
##STR00004##
[0126] Next, 1.5 g (1.58 mmol) of compound 5 was dissolved in 20 mL of DCM in an ice bath. Then, 4 mL of TFA were added and stirred for 2 h. The progress of the reaction was monitored by TLC. After the reaction was completed, all solvents were evaporated in a rotary evaporator. The product was then dissolved in water, neutralised with NaHCO3 solution, extracted with ethyl acetate, dried over anhydrous sodium sulphate, and evaporated by a rotary evaporator to obtain an oily product 6, which was immediately used for the next reaction. Yield: 1.103 g (1.47 mmol, 93.3%). ESI-MS (m/z): [M]=762.89 (calculated); 762.75 (observed); [M+Na]+=785.89 (calculated); 785.80 (observed); [M+K]+=801.89 (calculated); 801.62 (observed).
[0127] Synthesis of Phenyl-bis-pyridin-2ylmethyl-amine (1/): To a solution of 2-chloromethylprydine hydrochloride (2 g, 12 mmol) in H.sub.2O (0.5 ml), aniline (0.558 g, 6 mmol), 5 N NaOH (6 ml) and hexadecytrimethylammonium chloride (20 mg) were added under N.sub.2 protection. The mixture was stirred vigorously for 24 h at RT. It was then extracted with CH.sub.2Cl.sub.2, and the extract was washed with H.sub.2O and dried with MgSO.sub.4. After the solvent was evaporated, the desired product was obtained as a beige solid via column chromatography (silica, CH.sub.2Cl.sub.2/AcOEt, 4/1, v/v). Yield: 850.6 g (3.08 mmol, 51.2%). .sup.1H NMR (CDCl.sub.3, 400 MHz, ppm): 8.60 (d, J=6.8 Hz, 2H ArH), 7.63 (t, J=7.6 Hz, 2H ArH), 7.28 (d, J=8 Hz, 2H ArH), 7.19-7.15 (m, 4H ArH), 6.74-6.70 (m, 3H ArH), 4.84 (s, 4H CH2). ESI-MS (m/z): [M+H]+=276.14 (calculated); 276.17 (observed).
##STR00005##
[0128] Synthesis of 4-(Bis-Pyridin-2-ylmethyl-amino-benzaldehyde (2): POCl.sub.3 (1 ml, 17 mmol) was added to the solution of DMF (2 ml, 26 mmol) in 2 portions within 30 min, and cooled in an ice bath. Then, the solution was stirred for 30 min. Compound 1 (0.800 g, 2.89 mmol) in DMF (1.25 ml) was added in portions within 20 min. The mixture was heated for 3 h at 90 C., poured into H.sub.2O (5 ml), and then neutralized to pH 6-8 with K.sub.2CO.sub.3 along with stirring. The mixture was extracted with CH2Cl2, and dried with Na.sub.2SO.sub.4. Via column chromatography (silica, petroleum:acetone, 5:3, v/v), the desired product was obtained as a yellow sticky oil. Yield: 294.3 mg (0.97 mmol, 33.5%). .sup.1H NMR (CDCl.sub.3, 400 MHz, ppm): 9.75 (s, 1H, CHO), 8.60 (d, J=5.8 Hz, 2H ArH), 7.68-7.61 (m, 4H ArH), 7.20 (d, J=7.8 Hz, 4H ArH), 6.78 (d, J=8.4 Hz, 2H ArH), 4.89 (s, 4H CH2). ESI-MS (m/z): [M]=303.13 (calculated); 303.33 (observed).
[0129] Synthesis of L: 2 (200 mg, 0.65 mmol) was added to a solution of 6 (490.2 mg, 0.655 mmol) dissolved in 20 ml of methanol. The resulting mixture was stirred for 8 h. After the reaction was completed (confirmed by TLC), the reaction mixture was filtered off and a light brown oily residue was obtained upon removal of the solvent from the filtrate under vacuum. This oily residue upon treatment with n-hexane yielded a light brownish solid precipitate, which was collected by decantation as well as proper washing and drying to afford L as a pure product. Yield: 518.6 mg, 60.5%. 9.04 (d, J=6.0 Hz, 2H ArH of DPA based receptor), 8.59 (s, 1H NCH), 8.13-8.11 (m, 2H, NH Phe and Gly), 7.71-7.66 (m, 14H ArH), 7.22 (d, J=7.8 Hz, 4H ArH), 6.73 (d, J=8.2 Hz, 2H ArH), 5.32 (s, 4H, CH2 of DPA), 4.12-4.07 (m, 1H, CH Phe), 3.89-3.84 (m, 1H, CH Phe), 3.54-3.16 (m, 2H, CH.sub.2 Gly), 2.38-2.35 (m, 4H, CH Phe), 2.12-2.09 ((m, 2H, CH2 EDA), ESI-MS (m/z): [M/2]=666.32 (calculated); 666.37 (observed); [M+2H]+=1335.58 (calculated); 1335.64 (observed).
##STR00006##
[0130] Synthesis of LM: L (200 mg, 0.15 mmol) was dissolved in 20 mL of methanol and then a solution of Cu(ClO.sub.4).sub.2.6H.sub.2O (138 mg, 0.372 mmol) in 5 mL HPLC water was added in a dropwise manner into it. The resulting solution was stirred for 10 h at RT. The desired compound was then precipitated in a pure form by slow evaporation of the solvent at RT. The precipitate was filtered, washed with cold water and dried. Yield: 160 mg, 57.5%. ESI-MS (m/z): [M+2H]+=1854.86 (calculated); 1855.31 (observed).
##STR00007##