BCMA CAR-T cells with enhanced activities
12036243 ยท 2024-07-16
Assignee
Inventors
- Regina Junhui Lin (San Mateo, CA, US)
- Siler Panowski (Berkeley, CA, US)
- Cesar Adolfo SOMMER (San Mateo, CA, US)
- Thomas John Van Blarcom (Oakland, CA)
- Barbra Johnson SASU (San Francisco, CA, US)
- Arun BALAKUMARAN (Westfield, NJ, US)
Cpc classification
A61K39/4611
HUMAN NECESSITIES
A61K35/17
HUMAN NECESSITIES
C07K2319/33
CHEMISTRY; METALLURGY
C07K14/715
CHEMISTRY; METALLURGY
A61K39/464417
HUMAN NECESSITIES
C07K14/70578
CHEMISTRY; METALLURGY
A61K2239/38
HUMAN NECESSITIES
C07K14/7151
CHEMISTRY; METALLURGY
C12N15/86
CHEMISTRY; METALLURGY
C07K16/2878
CHEMISTRY; METALLURGY
A61P35/00
HUMAN NECESSITIES
International classification
A61K35/17
HUMAN NECESSITIES
A61P35/00
HUMAN NECESSITIES
C07K14/715
CHEMISTRY; METALLURGY
C07K16/28
CHEMISTRY; METALLURGY
Abstract
Provided here are engineered immune cells that comprise a constitutively active chimeric cytokine receptor (CACCR) and a B-cell maturation antigen (BCMA) specific chimeric antigen receptor (CAR). Also provided herein are engineered immune cells that comprise one or more nucleic acids e.g. a bicistronic vector such as a viral vector that encode the CACCRs and BCMA CARs and engineered immune cells e.g. engineered autologous or allogeneic T cells that express both CACCRs and BCMA CARs from the nucleic acids. When present on chimeric antigen receptor (CAR)-bearing engineered immune cells, the CACCRs allow for increased immune cell activation, proliferation, persistence, and/or potency. Further provided herein are methods of making and using the engineered immune cells described herein, such as methods of treating a disease or condition by administering at least one appropriate dose of the cells to a patient suffering from the condition.
Claims
1. An engineered immune cell comprising an anti-B cell maturation antigen (BCMA) chimeric antigen receptor (CAR) and a constitutively active chimeric cytokine receptor (CACCR), wherein the CACCR comprises two monomers, each monomer comprising: a transmembrane domain; a Janus Kinase (JAK)-binding domain; and a recruiting domain comprising the amino acid sequence of SEQ ID NO: 78, wherein the transmembrane domain and JAK-binding domain are present in a polypeptide (TM/JAK polypeptide) that comprises the amino acid sequence of SEQ ID NO: 12, wherein the CACCR does not comprise an extracellular ligand-binding domain, wherein the anti-BCMA CAR comprises an extracellular ligand-binding domain, a transmembrane domain, and an intracellular signaling domain, wherein the extracellular ligand-binding domain specifically recognizes and binds to human BCMA and comprises a single chain variable fragment (scFv), wherein the scFv comprises a heavy chain variable (VH) region and a light chain variable (VL) region; and wherein the VH region comprises a VH CDR1 comprising the amino acid sequence of SEQ ID NO: 146, 147, or 148; a VH CDR2 comprising the amino acid sequence of SEQ ID NO: 149 or 150; and a VH CDR3 comprising the amino acid sequence of SEQ ID NO: 151; and the VL region comprises a VL CDR1 comprising the amino acid sequence of SEQ ID NO: 152; a VL CDR2 comprising the amino acid sequence of SEQ ID NO: 153; and a VL CDR3 comprising the amino acid sequence of SEQ ID NO: 154.
2. The engineered immune cell of claim 1, wherein the CACCR comprises the amino acid sequence of SEQ ID NO: 100, 181, or 185.
3. The engineered immune cell of claim 1, wherein the VH region comprises the amino acid sequence of SEQ ID NO: 144 and the VL region comprises the amino acid sequence of SEQ ID NO: 145.
4. The engineered immune cell of claim 1, wherein the intracellular signaling domain of the BCMA CAR comprises a CD3? (CD3zeta) signaling domain and/or a 4-1BB signaling domain.
5. The engineered immune cell of claim 1, wherein the BCMA CAR comprises a safety switch comprising the CD20 mimotope.
6. The engineered immune cell of claim 1, wherein the BCMA CAR comprises the amino acid sequence of SEQ ID NO: 140, 141 or 166.
7. An engineered immune cell that comprises one or more polynucleotides that encode a BCMA CAR polypeptide that comprises the amino acid sequence of SEQ ID NO: 140, 141 or 166 and a CACCR polypeptide that comprises the amino acid sequence of SEQ ID NO: 100, 181, or 185.
8. The engineered immune cell of claim 7, wherein a single polynucleotide encodes both the polypeptide that comprises the amino acid sequence of SEQ ID NO: 140, 141 or 166 and the polypeptide that comprises the amino acid sequence of SEQ ID NO: 100, 181, or 185.
9. An engineered immune cell of claim 1 comprising a polynucleotide comprising the nucleic acid sequence of SEQ ID NO: 176.
10. The engineered immune cell of claim 7, wherein the one or more polynucleotides comprise a promoter.
11. The engineered immune cell of claim 10, wherein the promoter comprises an EF-1 alpha promoter.
12. The engineered immune cell of claim 1, wherein the engineered immune cell is an engineered T cell.
13. The engineered immune cell of claim 1, further comprising one or more genetic modifications in T cell receptor alpha constant region (TRAC) and/or CD52 gene to reduce or negate the expression of TCR alpha and/or CD52.
14. A method of treating a patient suffering from a disease or condition, wherein the method comprises administering an effective amount of the engineered immune cell of claim 1 to the patient in need thereof.
15. The method of claim 14, wherein the disease or condition is multiple myeloma.
16. The method of claim 14, wherein the engineered immune cell is allogeneic to the patient.
17. The method of claim 14, wherein the method comprises administering at least one dose of the engineered immune cell to the patient, and further wherein one dose contains between about 7?10{circumflex over ()}6 cells and about 480?10{circumflex over ()}6 cells.
18. The method of claim 17, wherein the dose ranges from about 20?10{circumflex over ()}6 cells/dose to about 480?10{circumflex over ()}6 cells/dose or the at least one dose is about 20?10{circumflex over ()}6 cells/dose, about 40?10{circumflex over ()}6 cells/dose, about 80?10{circumflex over ()}6 cells/dose, about 120?10{circumflex over ()}6 cells/dose, about 240?10{circumflex over ()}6 cells/dose, about 320?10{circumflex over ()}6 cells/dose, about 360?10{circumflex over ()}6 cells/dose, or about 480?10{circumflex over ()}6 cells/dose.
19. One or more isolated polynucleotides encoding a BCMA CAR that comprises an amino acid sequence that is at least about 90% identical to the amino acid sequence of SEQ ID NO: 140, 141 or 166 and encoding a CACCR that comprises a polypeptide that is at least about 90% identical to the amino acid sequence of SEQ ID NO: 100, 181, or 185; wherein the CACCR comprises the amino acid sequence of SEQ ID NO: 78 and SEQ ID NO: 12.
20. A vector that comprises the one or more isolated polynucleotides of claim 19.
21. The vector of claim 20, wherein the BCMA CAR comprises the amino acid sequence of SEQ ID NO: 140, 141 or 166 and the CACCR comprises the amino acid sequence of SEQ ID NO: 100, 181, or 185.
22. The vector of claim 20, wherein the vector further comprises a promoter.
23. The vector of claim 22, wherein the promoter comprises an EF-1 alpha promoter.
24. The vector of claim 20, wherein the vector is a lentiviral vector.
25. The vector of claim 20 further comprising a mutant WPRE.
26. An engineered immune cell that comprises the one or more polynucleotides of claim 19.
27. A method of making an engineered immune cell of claim 1 comprising introducing into a cell: at least one polynucleotide that encodes a BCMA CAR and at least one polynucleotide that encodes a CACCR, wherein the engineered immune cell expresses a BCMA CAR and a CACCR.
28. The method of claim 27, wherein the immune cell is a T cell, dendritic cell, killer dendritic cell, mast cell, NK-cell, macrophage, monocyte, B-cell or an immune cell derived from a stem cell.
29. The method of claim 27, wherein the cell is autologous.
30. The method of claim 27, wherein the cell is allogeneic.
31. The method of claim 27, wherein the polynucleotide further encodes at least one selectable marker.
32. The method of claim 27, wherein the polynucleotide is introduced into the cell by electroporation, transfection and/or viral transduction.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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DETAILED DESCRIPTION
(28) The present disclosure provides the combination of a BCMA CAR and constitutively active chimeric cytokine receptors (CACCRs). The BCMA CARs and CACCRs disclosed herein are polypeptides that each comprises domains of different proteins and amino acid sequences, as further detailed herein. The presence of a constitutively active, tunable chimeric cytokine receptor allows for the immune potentiation of Signal 3 to meet the need for immune potentiation. Accordingly, when present on BCMA chimeric antigen receptor (CAR)-bearing immune cells (CAR-I cells, e.g. CAR-T cells) as disclosed herein, such CACCRs allow for increased immune cell activation, proliferation, persistence, and/or potency. Also provided herein are methods of making and using the CACCRs described herein in combination with BCMA specific CARs.
(29) The CACCRs for use as disclosed herein are tunable, and have flexible cytokine signaling outputs for the enhancement of BCMA CAR-T cell activity, persistence, and the like. The components, methods of making and use are described in turn below.
(30) I. Constitutively Active Chimeric Cytokine Receptors (CACCRs)
(31) The CACCRs of the disclosure are composed of two monomers, each monomer comprising: (a) a transmembrane domain; (b) a JAK-binding domain; and (c) a recruiting domain, wherein the monomers are constitutively dimerized. In some embodiments, the CACCR of the disclosure does not comprise an extracellular ligand-binding domain.
(32) In some embodiments, the monomers are identical, giving rise to a constitutively active homodimer. In such embodiments, the number of proteins that need to be expressed in a vector are reduced. In some embodiments, the monomers are not identical, giving rise to a constitutively active heterodimer, which may be desirable under certain circumstances.
(33) The monomers of the CACCRs of the disclosure are capable of spontaneously dimerizing, and can activate signaling in the absence of any exogenous stimulation or ligand (ligand-independent dimerization). The level of activity can be controlled by mutations introduced into the transmembrane domain of the CACCRs. A skilled artisan will appreciate that the monomers of the CACCRs are not dimerized 100% of the time, and may exist as a monomer.
A. Transmembrane Domains
(34) The CACCRs of the disclosure comprise transmembrane domains. The transmembrane domains of the disclosure contain sequences such that they allow for constitutive dimerization of two monomers, thus allowing constitutive JAK activation on the intracellular portion, and constitutive recruitment and phosphorylation of, for example, STAT on the cytoplasmic region of the receptor.
(35) The transmembrane domains are on the N-terminus and are coupled to intracellular/cytoplasmic domains on the C-terminus. In some embodiments, the coupling is achieved optionally through a linker.
(36) As used herein, the transmembrane domains are capable of insertion into the membrane of a cell in which it is expressed. In some embodiments, the CACCR transmembrane domains of the disclosure span a cellular membrane, and comprise an extracellular portion, and/or an intracellular portion. In some embodiments, the CACCR transmembrane domains of the disclosure span a cellular membrane, comprise an intracellular portion, and do not comprise an extracellular ligand binding portion.
(37) In some embodiments, the transmembrane domains of the disclosure are engineered (synthetic) and do not resemble any naturally occurring transmembrane domain, e.g. they are non-naturally occurring.
(38) In other embodiments, the transmembrane domains of the disclosure are derived from naturally occurring receptors.
(39) In some embodiments, the transmembrane domains and/or JAK-activating domains of the disclosure are derived from, for example, one or more of the following receptors: erythropoietin receptor (EpoR), Interleukin 6 signal transducer (GP130 or IL6ST), prolactin receptor (PrlR), growth hormone receptor (GHR), granulocyte colony-stimulating factor receptor (GCSFR), and thrombopoietin receptor/myeloproliferative leukemia protein receptor (TPOR/MPLR). When derived from naturally occurring receptors, the entire receptor, or the entire transmembrane sequence of the receptor may not be necessary to effectuate constitutive activation and constitutive JAK binding/activation on the intracellular portion. Accordingly fragments of naturally occurring receptors may be utilized. Furthermore, certain mutations may be introduced into the transmembrane domains derived from naturally occurring receptors, to further tune the downstream signaling.
(40) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring EpoR receptor.
(41) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring GP130 receptor.
(42) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring PrlR receptor.
(43) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring GHR receptor.
(44) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring GCSF receptor.
(45) In some embodiments, the transmembrane domain and/or JAK-activating domain of the disclosure is derived from the naturally occurring TPOR receptor.
(46) Table 1a provides exemplary full-length sequences of naturally occurring receptors provided in the disclosure, from which the transmembrane proteins are derived. The sequences provided in Table 1a are reference sequences, in relation to which later mutations are expressed, for example in Tables 1b and 1c.
(47) TABLE-US-00001 TABLE1a ExemplaryNaturallyOccurringReceptors SEQ NaturallyOccurringReceptorName IDNO: >AAI12154.1Erythropoietinreceptor[Homosapiens] 1 MDHLGASLWPQVGSLCLLLAGAAWAPPPNLPDPKFESKAALLAARGPEELLCFT ERLEDLVCFWEEAASAGVGPGNYSFSYQLEDEPWKLCRLHQAPTARGAVRFWC SLPTADTSSFVPLELRVTAASGAPRYHRVIHINEVVLLDAPVGLVARLADESGHV VLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVEILEGRTECVLSNLRGRTRYT FAVRARMAEPSFGGFWSAWSEPVSLLTPSDLDPLILTLSLILVVILVLLTVLALLSH RRALKQKIWPGIPSPESEFEGLFTTHKGNFQLWLYQNDGCLWWSPCTPFTEDPPA SLEVLSERCWGTMQAVEPGTDDEGPLLEPVGSEHAQDTYLVLDKWLLPRNPPSE DLPGPGGSVDIVAMDEGSEASSCSSALASKPSPEGASAASFEYTILDPSSQLLRPW TLCPELPPTPPHLKYLYLVVSDSGISTDYSSGDSQGAQGGLSDGPYSNPYENSLIP AAEPLPPSYVACS >AAI17403.1Interleukin6signaltransducer(GP130, 2 oncostatinMreceptor)[Homosapiens] MLTLQTWLVQALFIFLTTESTGELLDPCGYISPESPVVQLHSNFTAVCVLKEKCM DYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLE QNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDRGRETHLETNFTLKSEWATH KFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVK PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTAS TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWY KIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSHLQNYTVNATKLT VNLTNDRYVATLTVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDNMLWV EWTTPRESVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLIT VTPVYADGPGSPESIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQLPVDVQNG FIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEGGKDGPE FTFTTPKFAQGEIEAIVVPVCLAFLLTTLLGVLFCFNKRDLIKKHIWPNVPDPSKSH IAQWSPHTPPRHNFNSKDQMYSDGNFTDVSVVEIEANDKKPFPEDLKSLDLFKKE KINTEGHSSGIGGSSCMSSSRPSISSSDENESSQNTSSTVQYSTVVHSGYRHQVPSV QVFSRSESTQPLLDSEERPEDLQLVDHVDGGDGILPRQQYFKQNCSQHESSPDISH FERSKQVSSVNEEDFVRLKQQISDHISQSCGSGQMKMFQEVSAADAFGPGTEGQ VERFETVGMEAATDEGMPKSYLPQTVRQGGYMPQ >XP_011512371.1prolactinreceptorisoformX2[Homosapiens] 3 MKENVASATVFTLLLFLNTCLLNGQLPPGKPEIFKCRSPNKETFTCWWRPGTDGG LPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQ MGSSFSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGW FTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSA WSPATFIQIPSDFTMNDTTVWISVAVLSAVICLIIVWAVALKGYSMVTCIFPPVPGP KIKGFDAHLLEKGKSEELLSALGCQDFPPTSDYEDLLVEYLEVDDSEDQHLMSVH SKEHPSQGMKPTYLDPDTDSGRGSCDSPSLLSEKCEEPQANPSTFYDPEVIEKPEN PETTHTWDPQCISMEGKIPYFHAGGSKCSTWPLPQPSQHNPRSSYHNITDVCELA VGPAGAPATLLNEAGKDALKSSQTIKSREEGKATQQREVESFHSETDQDTPWLLP QEKTPFGSAKPLDYVEIHKVNKDGALSLLPKQRENSGKPKKPGTPENNKEYAKV SGVMDNNILVLVPDPHAKNVACFEESAKEAPPSLEQNQAEKALANFTATSSKCR LQLGGLDYLDPACFTHSFH >NP_000154.1growthhormonereceptorisoform1precursor 4 [Homosapiens] MDLWQLLLTLALAGSSDAFSGSEATAAILSRAPWSLQSVNPGLKTNSSKEPKFTK CRSPERETFSCHWTDEVHHGTKNLGPIQLFYTRRNTQEWTQEWKECPDYVSAGE NSCYFNSSFTSIWIPYCIKLTSNGGTVDEKCFSVDEIVQPDPPIALNWTLLNVSLTG IHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYS LKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQMSQFTCEEDFYFPWLLIIIFGI FGLTVMLFVFLFSKQQRIKMLILPPVPVPKIKGIDPDLLKEGKLEEVNTILAIHDSY KPEFHSDDSWVEFIELDIDEPDEKTEESDTDRLLSSDHEKSHSNLGVKDGDSGRTS CCEPDILETDFNANDIHEGTSEVAQPQRLKGEADLLCLDQKNQNNSPYHDACPAT QQPSVIQAEKNKPQPLPTEGAESTHQAAHIQLSNPSSLSNIDFYAQV SDITPAGSVVLSPGQKNKAGMSQCDMHPEMVSLCQENFLMDNAYFCEADAKKC IPVAPHIKVESHIQPSLNQEDIYITTESLTTAAGRPGTGEHVPGSEMPVPDYTSIHIV QSPQGLILNATALPLPDKEFLSSCGYVSTDQLNKIMP >XP_016855859.1granulocytecolony-stimulatingfactor 5 receptorisoformX1[Homosapiens] MARLGNCSLTWAALIILLLPGSLEECGHISVSAPIVHLGDPITASCIIKQNCSHLDPE PQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCCLNWGNSLQILDQ VELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQ GDSILDCVPKDGQSHCCIPRKHLLLYQNMGIWVQAENALGTSMSPQLCLDPMDV VKLEPPMLRTMDPSPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQRGEAS WALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERA PTVRLDTWWRQRQLDPRTVQLFWKPVPLEEDSGRIQGYVVSWRPSGQAGAILPL CNTTELSCTFHLPSEAQEVALVAYNSAGTSRPTPVVFSESRGPALTRLHAMARDP HSLWVGWEPPNPWPQGYVIEWGLGPPSASNSNKTWRMEQNGRATGFLLKENIR PFQLYEIIVTPLYQDTMGPSQHVYAYSQEMAPSHAPELHLKHIGKTWAQLEWVP EPPELGKSPLTHYTIFWTNAQNQSFSAILNASSRGFVLHGLEPASLYHIHLMAASQ AGAINSTVLTLMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLCCSPNRKNPLWPS VPDPAHSSLGSWVPTIMEELPGPRQGQWLGQTSEMSRALTPHPCVQDAFQLPGL GTPPITKLTVLEEDEKKPVPWESHNSSETCGLPTLVQTYVLQGDPRAVSTQPQSQS GTSDQVLYGQLLGSPTSPGPGHYLRCDSTQPLLAGLTPSPKSYENLWFQASPLGT LVTPAPSQEDDCVFGPLLNFPLLQGIRVHGMEALGSF >NP_005364.1thrombopoietinreceptorprecursor[Homosapiens] 6 MPSWALFMVTSCLLLAPQNLAQVSSQDVSLLASDSEPLKCFSRTFEDLTCFWDEE EAAPSGTYQLLYAYPREKPRACPLSSQSMPHFGTRYVCQFPDQEEVRLFFPLHLW VKNVFLNQTRTQRVLFVDSVGLPAPPSIIKAMGGSQPGELQISWEEPAPEISDFLR YELRYGPRDPKNSTGPTVIQLIATETCCPALQRPHSASALDQSPCAQPTMPWQDG PKQTSPSREASALTAEGGSCLISGLQPGNSYWLQLRSEPDGISLGGSWGSWSLPVT VDLPGDAVALGLQCFTLDLKNVTCQWQQQDHASSQGFFYHSRARCCPRDRYPI WENCEEEEKTNPGLQTPQFSRCHFKSRNDSIIHILVEVTTAPGTVHSYLGSPFWIH QAVRLPTPNLHWREISSGHLELEWQHPSSWAAQETCYQLRYTGEGHQDWKVLE PPLGARGGTLELRPRSRYRLQLRARLNGPTYQGPWSSWSDPTRVETATETAWISL VTALHLVLGLSAVLGLLLLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLRDTA ALSPPKATVSDTCEEVEPSLLEILPKSSERTPLPLCSSQAQMDYRRLQPSCLGTMPL SVCPPMAESGSCCTTHIANHSYLPLSYWQQP
(48) In some embodiments, the transmembrane domain of the disclosure is derived from a truncated version of the naturally occurring TPOR/MPLR (myeloproliferative leukemia protein) receptor show in Table 1a.
(49) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor of Table 1a.
(50) Table 1b provides exemplary transmembrane domain amino acid sequences of the disclosure, wherein the transmembrane domain is derived from the naturally occurring TPOR receptor. In the sequences listed in Table 1b, the TPOR receptor transmembrane amino acid sequence either comprises the SEQ ID NO: 7 (naturally occurring transmembrane sequence) or differs from SEQ ID NO: 7 in comprising one or more amino acid substitutions of SEQ ID NO: 7 (modified transmembrane sequence).
(51) TABLE-US-00002 TABLE1b Exemplarytransmembranedomainaminoacidsequences Transmembrane SEQ Domain Aminoacidsequence IDNO: TPOR/MPLR(478-582) SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 7 LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 8 H499L,S505N) LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 9 S505N) LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLSAVLGLL 10 H499L,W515K) LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 11 W515K) LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 12 H499L,S505N,W515K) LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 13 S505N,W515K) LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLSAVLNLL 14 H499L,G509N) LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL
(52) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at least at H499. In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitution H499L.
(53) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at least at S505. In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitution S505N.
(54) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at least at G509. In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitution G509N.
(55) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at least at W515. In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitution W515K.
(56) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at H499 and S505 (sequence provided in Table 1b).
(57) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at H499 and W515 (sequence provided in Table 1b).
(58) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at H499, S505, and W515 (sequence provided in Table 1b).
(59) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at S505 and W515 (sequence provided in Table 1b).
(60) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at H499 and G509 (sequence provided in Table 1b).
(61) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitutions H499L and S505N (sequence provided in Table 1b).
(62) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitutions H499L and W515K (sequence provided in Table 1b).
(63) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitutions H499L and G509N (sequence provided in Table 1b).
(64) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitutions S505N and W515K (sequence provided in Table 1b).
(65) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and the amino acid substitutions H499L, S505N, and W515K (sequence provided in Table 1b).
(66) In some embodiments, the transmembrane domain of the CACCR comprises amino acids 478-582 of the TPOR receptor, and an amino acid substitution at H499 and S505 (sequence provided in Table 1b).
(67) The CACCRs of the disclosure are tunable, to achieve the level of Signal 3/immune potentiation required in a BCMA CAR-bearing immune cell (e.g. BCMA CAR-T cell) and desired in a particular context or condition.
(68) In some embodiments, a low level of STAT5 activation is desired in a BCMA CAR-bearing immune cell (e.g. BCMA CAR-T cell). By way of example, in such embodiments, the transmembrane domain of the CACCR comprising amino acids 478-582 of the TPOR receptor, and the amino acid substitution S505N, W515K, or H499L/G509N may be introduced.
(69) In some embodiments, an increased level of STAT5 activation is desired in a BCMA CAR-bearing immune cell (e.g. BCMA CAR-T cell). By way of example, in such embodiments, the transmembrane domain of the CACCR comprising amino acids 478-582 of the TPOR receptor, and the amino acid substitutions H499L, S505N, and W515K may be introduced. By way of another example, in such embodiments, the transmembrane domain of the CACCR comprising amino acids 478-582 of the TPOR receptor, and the amino acid substitutions S505N and W515K may be introduced.
(70) In some embodiments, increased differentiation into memory T cells is desired in a BCMA CAR-bearing immune cell (e.g. BCMA CAR-T cell). By way of example, in such embodiments, the transmembrane domain of the CACCR comprising amino acids 478-582 of the TPOR receptor, and the amino acid substitutions W515K, or H499L/G509N may be introduced.
(71) In some embodiments, increased differentiation into memory T cells is desired in a BCMA CAR-bearing immune cell (e.g. BCMA CAR-T cell). By way of example, in such embodiments, the transmembrane domain of the CACCR comprising amino acids 478-582 of the TPOR receptor, and the amino acid substitutions S505N/W515K and H499L/S505N/W515K may be introduced.
(72) Also substitutions to increase cytotoxic potency, durability of response, and increased persistence are provided herein, for example S505N/W515K and H499L/S505N/W515K substitutions.
(73) TABLE-US-00003 TABLE1c ExemplaryTransmembrane+JAK2BindingDomainSequences Transmembraneand SEQ JAK2bindingdomain Aminoacidsequence IDNO: GCSFR(614-710) LTLMTLTPEGSELHIILGLFGLLLLLTCLCGTAWL 15 CCSPNRKNPLWPSVPDPAHSSLGSWVPTIMEEDA FQLPGLGTPPITKLTVLEEDEKKPVPWE GP130(609-700) TTPKFAQGEIEAIVVPVCLAFLLTTLLGVLFCFNK 16 RDLIKKHIWPNVPDPSKSHIAQWSPHTPPRHNFN SKDQMYSDGNFTDVSVVEIEAND TPOR/MPLR(478-582) SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 17 LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PL TPOR/MPLR(N?1) SDPTRVETATETWISLVTALHLVLGLSAVLGLLL 18 LRWQFPAHYRRLRHALWPSLPDLHRVLGQYLRD TAALSPPKATVSDTCEEVEPSLLEILPKSSERTPLP L TPOR/MPLR(N?2) SDPTRVETATETISLVTALHLVLGLSAVLGLLLLR 19 WQFPAHYRRLRHALWPSLPDLHRVLGQYLRDT AALSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?2+1) SDPTRVETATETLISLVTALHLVLGLSAVLGLLLL 20 RWQFPAHYRRLRHALWPSLPDLHRVLGQYLRDT AALSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?3) SDPTRVETATETSLVTALHLVLGLSAVLGLLLLR 21 WQFPAHYRRLRHALWPSLPDLHRVLGQYLRDT AALSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?4) SDPTRVETATETLVTALHLVLGLSAVLGLLLLRW 22 QFPAHYRRLRHALWPSLPDLHRVLGQYLRDTAA LSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?4+1) SDPTRVETATETILVTALHLVLGLSAVLGLLLLR 23 WQFPAHYRRLRHALWPSLPDLHRVLGQYLRDT AALSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?5) SDPTRVETATETVTALHLVLGLSAVLGLLLLRW 24 QFPAHYRRLRHALWPSLPDLHRVLGQYLRDTAA LSPPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?6) SDPTRVETATETTALHLVLGLSAVLGLLLLRWQF 25 PAHYRRLRHALWPSLPDLHRVLGQYLRDTAALS PPKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?7) SDPTRVETATETALHLVLGLSAVLGLLLLRWQFP 26 AHYRRLRHALWPSLPDLHRVLGQYLRDTAALSP PKATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?8) SDPTRVETATETLHLVLGLSAVLGLLLLRWQFPA 27 HYRRLRHALWPSLPDLHRVLGQYLRDTAALSPP KATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?9) SDPTRVETATETHLVLGLSAVLGLLLLRWQFPAH 28 YRRLRHALWPSLPDLHRVLGQYLRDTAALSPPK ATVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?10) SDPTRVETATETLVLGLSAVLGLLLLRWQFPAHY 29 RRLRHALWPSLPDLHRVLGQYLRDTAALSPPKA TVSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?11) SDPTRVETATETVLGLSAVLGLLLLRWQFPAHYR 30 RLRHALWPSLPDLHRVLGQYLRDTAALSPPKAT VSDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?12) SDPTRVETATETLGLSAVLGLLLLRWQFPAHYRR 31 LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV SDTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?13) SDPTRVETATETGLSAVLGLLLLRWQFPAHYRRL 32 RHALWPSLPDLHRVLGQYLRDTAALSPPKATVS DTCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?14) SDPTRVETATETLSAVLGLLLLRWQFPAHYRRLR 33 HALWPSLPDLHRVLGQYLRDTAALSPPKATVSD TCEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?15) SDPTRVETATETSAVLGLLLLRWQFPAHYRRLRH 34 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDT CEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?16) SDPTRVETATETAVLGLLLLRWQFPAHYRRLRH 35 ALWPSLPDLHRVLGQYLRDTAALSPPKATVSDT CEEVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?17) SDPTRVETATETVLGLLLLRWQFPAHYRRLRHA 36 LWPSLPDLHRVLGQYLRDTAALSPPKATVSDTCE EVEPSLLEILPKSSERTPLPL TPOR/MPLR(N?18) SDPTRVETATETLGLLLLRWQFPAHYRRLRHAL 37 WPSLPDLHRVLGQYLRDTAALSPPKATVSDTCEE VEPSLLEILPKSSERTPLPL TPOR/MPLR(N+1) SDPTRVETATETAWLISLVTALHLVLGLSAVLGL 38 LLLRWQFPAHYRRLRHALWPSLPDLHRVLGQYL RDTAALSPPKATVSDTCEEVEPSLLEILPKSSERTP LPL TPOR/MPLR(N+2) SDPTRVETATETAWVLISLVTALHLVLGLSAVLG 39 LLLLRWQFPAHYRRLRHALWPSLPDLHRVLGQY LRDTAALSPPKATVSDTCEEVEPSLLEILPKSSER TPLPL TPOR/MPLR(N+3) SDPTRVETATETAWLVLISLVTALHLVLGLSAVL 40 GLLLLRWQFPAHYRRLRHALWPSLPDLHRVLGQ YLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSE RTPLPL TPOR/MPLR(N+4) SDPTRVETATETAWILVLISLVTALHLVLGLSAVL 41 GLLLLRWQFPAHYRRLRHALWPSLPDLHRVLGQ YLRDTAALSPPKATVSDTCEEVEPSLLEILPKSSE RTPLPL TPOR/MPLR(N+5) SDPTRVETATETAWLILVLISLVTALHLVLGLSAV 42 LGLLLLRWQFPAHYRRLRHALWPSLPDLHRVLG QYLRDTAALSPPKATVSDTCEEVEPSLLEILPKSS ERTPLPL TPOR/MPLR(N+6) SDPTRVETATETAWLLILVLISLVTALHLVLGLSA 43 VLGLLLLRWQFPAHYRRLRHALWPSLPDLHRVL GQYLRDTAALSPPKATVSDTCEEVEPSLLEILPKS SERTPLPL TPOR/MPLR(N+7) SDPTRVETATETAWVLLILVLISLVTALHLVLGLS 44 AVLGLLLLRWQFPAHYRRLRHALWPSLPDLHRV LGQYLRDTAALSPPKATVSDTCEEVEPSLLEILPK SSERTPLPL TPOR/MPLR(N+8) SDPTRVETATETAWLVLLILVLISLVTALHLVLGL 45 SAVLGLLLLRWQFPAHYRRLRHALWPSLPDLHR VLGQYLRDTAALSPPKATVSDTCEEVEPSLLEILP KSSERTPLPL
B. Janus Kinase (JAK)-Binding Domains
(74) The CACCRs of the disclosure comprise intracellular JAK-binding domains. The JAK-binding domain is coupled to the C-terminus of the transmembrane domain, either directly, or via a linker. The JAK-binding domain is coupled to the transmembrane domain on the intracellular side of the chimeric cytokine receptor.
(75) In some embodiments, the JAK-binding domain is a JAK-1-binding domain, a JAK-2 binding domain, a JAK-3 binding domain, or a TYK2 binding domain.
(76) In some embodiments, the JAK-binding domains of the CACCRs of the disclosure are naturally occurring, and derived from a naturally occurring receptor.
(77) In some embodiments, the JAK-binding domains of the CACCRs of the disclosure are synthetic.
(78) Table 1b and Table 1c provide exemplary amino acid sequences for transmembrane and JAK2 binding domains of the disclosure. In some embodiments, the CACCR of the disclosure comprises a transmembrane and JAK2 binding domain comprising an amino acid sequence selected from the sequences in Tables 1b and 1c. An amino acid sequence that comprises both a transmembrane and a JAK2 binding domain is a polypeptide that may be referred to herein as a TM/JAK polypeptide. Thus, for example, Table 1c lists exemplary TM/JAK polypeptides such as TPOR/MPLR(478-582), and similarly Table 1b lists variants of TPOR/MPLR(478-582) that are also TM/JAK polypeptides, such as TPOR/MPLR(478-582; H499L, S505N, W515K) and TPOR/MPLR(478-582; S505N, W515K). In some embodiments, the CACCR of the disclosure comprises a transmembrane and JAK2 binding domain comprising an amino acid sequence that is at least 80%, 85%, 90%, 95%, 98%, 99%, or 100% identical to any one of the sequences in Tables 1b and 1c.
C. Recruiting Domains
(79) The CACCRs of the disclosure comprise cytoplasmic recruiting domains. The recruiting domain can be a STAT-recruiting domain, an AP1-recruiting domain, a Myc/Max-recruiting domain, or an NFkB-recruiting domain. In some embodiments, the recruiting domain is a Signal Transducer and Activator of Transcription (STAT)-recruiting (STAT-activating) domains, for example, from receptor tails (cytotails) or from cytokine receptor tails. These intracellular recruiting domains of the CACCRs of the disclosure allow for the propagation of Signal 3 in an immune cell comprising a BCMA CAR and a chimeric cytokine receptor (e.g. a BCMA CAR-T cell with a chimeric cytokine receptor of the disclosure). Cytokine signaling propagated through the STAT-recruiting domain allows for the cytokine-based immune potentiation of the cell. In some embodiments, the immune-potentiation is homeostatic, e.g. signaling gives rise to increase in immune cells bearing the CAR. In some embodiments, the immune-potentiation is inflammatory, e.g. signaling gives rise to an increase in the potency of the immune cells bearing the CAR. In some embodiments, the immune-potentiation prevents exhaustion, e.g. signaling maintains the long-term functionality of immune cells bearing the CAR.
(80) In some embodiments, the recruiting domains of the disclosure are synthetic, and do not resemble any naturally occurring receptor fragment. In some embodiments, the immune-potentiation prevents exhaustion, e.g. signaling maintains the long-term functionality of immune cells bearing the BCMA CAR.
(81) In some embodiments, the Stat-recruiting domains of the disclosure are synthetic, and do not resemble any naturally occurring receptor fragment.
(82) In other embodiments, the Stat-recruiting domains of the disclosure are derived from cytoplasmic tails of naturally occurring receptors, e.g. derived from naturally occurring cytokine receptors. These cytoplasmic tails of naturally occurring receptors may be the regions downstream of the JAK-activating domains of the transmembrane domain of the receptor. The Stat-recruiting domains of the chimeric cytokine receptors comprise at least one STAT-recruiting domain from at least one receptor. In some embodiments, the Stat-recruiting domain comprises at least one STAT1-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT2-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT3-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT4-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT5-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT6-recruiting domain. In some embodiments, the Stat-recruiting domain comprises at least one STAT7-recruiting domain.
(83) In some embodiments, the naturally occurring receptor from which the Stat-recruiting domain is derived, is not a cytokine receptor.
(84) In some embodiments, the naturally occurring receptor from which the Stat-recruiting domain is derived, is a cytokine receptor. Exemplary cytokine receptors through which T cell-immune potentiating cytokines signal include, but are not limited to IL-2 receptor, IL-7 receptor, IL-12 receptor, IL-15 receptor and IL-21 receptor. In alternative embodiments, the receptor from which the Stat-recruiting domain is derived, is not a cytokine receptor. By choosing the Stat-recruiting domain of the CACCR, the receptor can be redirected to signaling of choice.
(85) In some embodiments, the CACCR of the disclosure comprises a recruiting domain connected to the C-terminus of the transmembrane/JAK2 binding domain, with or without a linker. In some embodiments, the linker comprises one or more amino acid residues.
(86) Table 2a provides exemplary receptors from which recruiting domains of the CACCRs of the disclosure are derived. Table 2b provides exemplary amino acid sequences of recruiting domains of the disclosure. In some embodiments, the CACCR of the disclosure comprises a recruiting domain comprising the amino acid sequence selected from one or more of the receptor sequences in Table 2b. In some embodiments, the CACCR of the disclosure comprises a recruiting domain comprising an amino acid sequence that is at least 80%, 85%, 90%, 95%, 98%, 99%, or 100% identical to any one of the sequences in Table 2b.
(87) TABLE-US-00004 TABLE 2a Exemplary Receptors Source of Recruiting Domains BLNK IL2RG EGFR EpoR GHR IFNAR1 IFNAR2 IFNAR1/2 IFNLR1 IL10R1 IL12Rb1 IL12Rb2 IL21R IL2Rb IL2small IL7R IL7Ra IL9R IL15R IL21R
(88) TABLE-US-00005 TABLE2b RecruitingDomain(Cytotail)Sequences SEQ Cytotailsequences Aminoacidsequence IDNO: IL7R(316-459) ARDEVEGFLQDTFPQQLEESEKQRLGGDVQSPN 46 CPSEDVVITPESFGRDSSLTCLAGNVSACDAPILS SSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPPP FSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTMS SFYQNQ IL2Rb(333-551) VTQLLLQQDKVPEPASLSSNHSLTSCFTNQGYFF 47 FHLPDALEIEACQVYFTYDPYSEEDPDEGVAGAP TGSSPQPLQPLSGEDDAYCTFPSRDDLLLFSPSLL GGPSPPSTAPGGSGAGEERMPPSLQERVPRDWDP QPLGPPTPGVPDLVDFQPPPELVLREAGEEVPDA GPREGVSFPWSRPPGQGEFRALNARLPLNTDAYL SLQELQGQDPTHLV IFNAR1(508-557) ISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNE 48 DESESKTSEELQQDFV IFNAR2(310-515) KKKVWDYNYDDESDSDTEAAPRTSGGGYTMHG 49 LTVRPLGQASATSTESQLIDPESEEEPDLPEVDVE LPTMPKDSPQQLELLSGPCERRKSPLQDPFPEEDY SSTEGSGGRITFNVDLNSVFLRVLDDEDSDDLEA PLMLSSHLEEMVDPEDPDNVQSNHLLASGEGTQ PTFPSPSSEGLWSEDAPSDQSDTSESDVDLGDGYI MR IFNAR1/2(IFNAR1 ISTIATVEETNQTDEDHKKYSSQTSQDSGNYSNE 50 residues508-557-IFNAR2 DESESKTSEELQQDFVKKKVWDYNYDDESDSDT residues310-515) EAAPRTSGGGYTMHGLTVRPLGQASATSTESQLI DPESEEEPDLPEVDVELPTMPKDSPQQLELLSGPC ERRKSPLQDPFPEEDYSSTEGSGGRITFNVDLNSV FLRVLDDEDSDDLEAPLMLSSHLEEMVDPEDPD NVQSNHLLASGEGTQPTFPSPSSEGLWSEDAPSD QSDTSESDVDLGDGYIMR IFNLR1(300-520) RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEE 51 DTEDGVSFQPYIEPPSFLGQEHQAPGHSEAGGVD SGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWD RAGSSGYLAEKGPGQGPGGDGHQESLPPPEFSKD SGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPV SLQTLTFCWESSPEEEEEARESEIEDSDAGSWGAE STQRTEDRGRTLGHYMAR IL2RG(335-369) IPPKGGALGEGPGASPCNQHSPYWAPPCYTLKPE 52 T IL9R(356-521) TALLTCGPARPWKSVALEEEQEGPGTRLPGNLSS 53 EDVLPAGCTEWRVQTLAYLPQEDWAPTSLTRPA PPDSEGSRSSSSSSSSNNNNYCALGCYGGWHLSA LPGNTQSSGPIPALACGLSCDHQGLETQQGVAW VLAGHCQRPGLHEDLQGMLLPSVLSKARSWTF IL21R(322-538) PRSPAKRLQLTELQEPAELVESDGVPKPSFWPTA 54 QNSGGSAYSEERDRPYGLVSIDTVTVLDAEGPCT WPCSCEDDGYPALDLDAGLEPSPGLEDPLLDAG TTVLSCGCVSAGSPGLGGPLGSLLDRLKPPLADG EDWAGGLPWGGRSPGGVSESEAGSPLAGLDMD TFDSGFVGSDCSSPVECDFTSPGDEGPPRSYLRQ WVVIPPPLSSPGPQAS GHR(353-638) PDEKTEESDTDRLLSSDHEKSHSNLGVKDGDSGR 55 TSCCEPDILETDFNANDIHEGTSEVAQPQRLKGE ADLLCLDQKNQNNSPYHDACPATQQPSVIQAEK NKPQPLPTEGAESTHQAAHIQLSNPSSLSNIDFYA QVSDITPAGSVVLSPGQKNKAGMSQCDMHPEM VSLCQENFLMDNAYFCEADAKKCIPVAPHIKVES HIQPSLNQEDIYITTESLTTAAGRPGTGEHVPGSE MPVPDYTSIHIVQSPQGLILNATALPLPDKEFLSS CGYVSTDQLNKIMP EpoR(339-508) WGTMQAVEPGTDDEGPLLEPVGSEHAQDTYLVL 56 DKWLLPRNPPSEDLPGPGGSVDIVAMDEGSEASS CSSALASKPSPEGASAASFEYTILDPSSQLLRPWT LCPELPPTPPHLKYLYLVVSDSGISTDYSSGDSQG AQGGLSDGPYSNPYENSLIPAAEPLPPSYVACS murineIL2Rb(337-539) AVQLLLLQKDSAPLPSPSGHSQASCFTNQGYFFF 57 HLPNALEIESCQVYFTYDPCVEEEVEEDGSRLPE GSPHPPLLPLAGEQDDYCAFPPRDDLLLFSPSLST PNTAYGGSRAPEERSPLSLHEGLPSLASRDLMGL QRPLERMPEGDGEGLSANSSGEQASVPEGNLHG QDQDRGQGPILTLNTDAYLSLQELQAQDSVHLI murineIL7Ra(316-459) ARDEVESFLPNDLPAQPEELETQGHRAAVHSAN 58 RSPETSVSPPETVRRESPLRCLARNLSTCNAPPLL SSRSPDYRDGDRNRPPVYQDLLPNSGNTNVPVPV PQPLPFQSGILIPVSQRQPISTSSVLNQEEAYVTMS SFYQNK EGFR(955-1186) VIQGDERMHLPSPTDSNFYRALMDEEDMDDVVD 59 ADEYLIPQQGFFSSPSTSRTPLLSSLSATSNNSTVA CIDRNGLQSCPIKEDSFLQRYSSDPTGALTEDSID DTFLPVPEYINQSVPKRPAGSVQNPVYHNQPLNP APSRDPHYQDPHSTAVGNPEYLNTVQPTCVNSTF DSPAHWAQKGSHQISLDNPDYQQDFFPKEAKPN GIFKGSTAENAEYLRVAPQSSEFIGA EGFR(955-1186; VIQGDERMHLPSPTDSNFFRALMDEEDMDDVVD 60 Y974F,d1045-1057) ADEYLIPQQGFFSSPSTSRTPLLSSLSATSNNSTVA CIDRNGLQSCPIKEDSFLQRIDDTFLPVPEYINQSV PKRPAGSVQNPVYHNQPLNPAPSRDPHYQDPHS TAVGNPEYLNTVQPTCVNSTFDSPAHWAQKGSH QISLDNPDYQQDFFPKEAKPNGIFKGSTAENAEY LRVAPQSSEFIGA EGFR(955-1009;Y974F) VIQGDERMHLPSPTDSNFFRALMDEEDMDDVVD 61 ADEYLIPQQGFFSSPSTSRTP EGFR(1019-1085) NNSTVACIDRNGLQSCPIKEDSFLQRIDDTFLPVP 62 EYINQSVPKRPAGSVQNPV EGFR(1037-1103; KEDSFLQRIDDTFLPVPEFINQSVPKRPAGSVQNP 63 Y1068/1101F, VYHNQPLNPAPSRDPHFQD d1045-1057) EGFR(1066-1118; VPEFINQSVPKRPAGSVQNPVFHNQPLNPAPSRD 64 Y1068/1086F) PHYQDPHSTAVGNPEYLNTV EGFR(1122-1165) PEYLNTVQPTCVNSTFDSPAHWAQKGSHQISLDN 65 PDYQQDFFPKEAKPNGIFKG EGFR(1133-1186; WAQKGSHQISLDNPDFQQDFFPKEAKPNGIFKGS 66 Y1148F) TAENAEYLRVAPQSSEFIGA IL12Rb2(775-825) SDPKPENPACPWTVLPAGDLPTHDGYLPSNIDDL 67 PSHEAPLADSLEELEPQ IL7Ra(376-416) ACDAPILSSSRSLDCRESGKNGPHVYQDLLLSLG 68 TTNSTLP IL7Ra(424-459) GILTLNPVAQGQPILTSLGSNQEEAYVTMSSFYQ 69 NQ IL7Ra(376-416,424-459) ACDAPILSSSRSLDCRESGKNGPHVYQDLLLSLG 70 TTNSTLPQGQPILTSLGSNQEEAYVTMSSFYQNQ IL7Ra(424-459;Y456F) GILTLNPVAQGQPILTSLGSNQEEAYVTMSSFFQN 71 Q IL7R(376-416, ACDAPILSSSRSLDCRESGKNGPHVYQDLLLSLG 72 424-459,Y456F) TTNSTLPQGQPILTSLGSNQEEAYVTMSSFFQNQ IL2Rbsmall(393-433) DEGVAGAPTGSSPQPLQPLSGEDDAYCTFPSRDD 73 LLLFSPSGQGEFRALNARLPLNTDAYLSLQELQG QDPTHLV IL2Rbsmall(518-551) GQGEFRALNARLPLNTDAYLSLQELQGQDPTHL 74 V IL2Rbsmall(339-379, QQDKVPEPASLSSNHSLTSCFTNQGYFFFHLPDA 75 393-433) LEIEACQDEGVAGAPTGSSPQPLQPLSGEDDAYC TFPSRDDLLLFSPS IL2Rbsmall(339-379, QQDKVPEPASLSSNHSLTSCFTNQGYFFFHLPDA 76 518-551) LEIEACQ GQGEFRALNARLPLNTDAYLSLQELQGQDPTHL V IL2Rbsmall(393-433, DEGVAGAPTGSSPQPLQPLSGEDDAYCTFPSRDD 77 518-551) LLLFSPSGQGEFRALNARLPLNTDAYLSLQELQG QDPTHLV IL2Rbsmall(339-379, QQDKVPEPASLSSNHSLTSCFTNQGYFFFHLPDA 78 393-433,518-551) LEIEACQDEGVAGAPTGSSPQPLQPLSGEDDAYC TFPSRDDLLLFSPSGQGEFRALNARLPLNTDAYLS LQELQGQDPTHLV IFNAR2small(310-352) KKKVWDYNYDDESDSDTEAAPRTSGGGYTMHG 79 LTVRPLGQASA IFNAR2small(486-515) EGLWSEDAPSDQSDTSESDVDLGDGYIMR 80 IFNAR2small(310-352, KKKVWDYNYDDESDSDTEAAPRTSGGGYTMHG 81 486-515) LTVRPLGQASA EGLWSEDAPSDQSDTSESDVDLGDGYIMR BLNK(53-208) ASESPADEEEQWSDDFDSDYENPDEHSDSEMYV 82 MPAEENADDSYEPPPVEQETRPVHPALPFARGEY IDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLP ALTALQKPQVPPKPKGLLEDEADYVVPVEDNDE NYIHPTESSSPPPEKAPMVNR BLNK(53-208;Y72F) ASESPADEEEQWSDDFDSDFENPDEHSDSEMYV 83 MPAEENADDSYEPPPVEQETRPVHPALPFARGEY IDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLP ALTALQKPQVPPKPKGLLEDEADYVVPVEDNDE NYIHPTESSSPPPEKAPMVNR BLNK(53-208; ASESPADEEEQWSDDFDSDFENPDEHSDSEMYV 84 Y72F,Y96F) MPAEENADDSFEPPPVEQETRPVHPALPFARGEY IDNRSSQRHSPPFSKTLPSKPSWPSEKARLTSTLP ALTALQKPQVPPKPKGLLEDEADYVVPVEDNDE NYIHPTESSSPPPEKAPMVNR EpoR(339-508) WGTMQAVEPGTDDEGPLLEPVGSEHAQDTYLVL 85 DKWLLPRNPPSEDLPGPGGSVDIVAMDEGSEASS CSSALASKPSPEGASAASFEYTILDPSSQLLRPWT LCPELPPTPPHLKYLYLVVSDSGISTDYSSGDSQG AQGGLSDGPYSNPYENSLIPAAEPLPPSYVACS IL12Rb2(714-862) VTPVFRHPPCSNWPQREKGIQGHQASEKDMMHS 86 ASSPPPPRALQAESRQLVDLYKVLESRGSDPKPE NPACPWTVLPAGDLPTHDGYLPSNIDDLPSHEAP LADSLEELEPQHISLSVFPSSSLHPLTFSCGDKLTL DQLKMRCDSLML IL12Rb1(622-662) WDKGERTEPLEKTELPEGAPELALDTELSLEDGD 87 RCKAKM IL10R1(304-578) VSPELKNLDLHGSTDSGFGSTKPSLQTEEPQFLLP 88 DPHPQADRTLGNREPPVLGDSCSSGSSNSTDSGIC LQEPSLSPSTGPTWEQQVGSNSRGQDDSGIDLVQ NSEGRAGDTQGGSALGHHSPPEPEVPGEEDPAA VAFQGYLRQTRCAEEKATKTGCLEEESPLTDGL GPKFGRCLVDEAGLHPPALAKGYLKQDPLEMTL ASSGAPTGQWNQPTEEWSLLALSSCSDLGISDWS FAHDLAPLGCVAAPGGLLGSFNSDLVTLPLISSLQ SSE IL2Rb(333-551, VTQLLLQQDKVPEPASLSSNHSLTSCFTNQGYFF 106 Y381S,Y384S,Y387S) FHLPDALEIEACQVSFTSDPSSEEDPDEGVAGAPT GSSPQPLQPLSGEDDAYCTFPSRDDLLLFSPSLLG GPSPPSTAPGGSGAGEERMPPSLQERVPRDWDPQ PLGPPTPGVPDLVDFQPPPELVLREAGEEVPDAG PREGVSFPWSRPPGQGEFRALNARLPLNTDAYLS LQELQGQDPTHLV IL2Rb(333-551, VTQLLLQQDKVPEPASLSSNHSLTSCFTNQGSFFF 142 Y364S,Y381S,Y384S, HLPDALEIEACQVSFTSDPSSEEDPDEGVAGAPTG Y387S) SSPQPLQPLSGEDDAYCTFPSRDDLLLFSPSLLGG PSPPSTAPGGSGAGEERMPPSLQERVPRDWDPQP LGPPTPGVPDLVDFQPPPELVLREAGEEVPDAGP REGVSFPWSRPPGQGEFRALNARLPLNTDAYLSL QELQGQDPTHLV
(89) In some embodiments, the Stat-recruiting domain of a CACCR of the disclosure comprises a STAT-recruiting domain from one receptor.
(90) In order to generate multiple outputs, two or more STAT-recruiting domains may be joined in tandem to mimic signaling from one or more cytokines.
(91) In some embodiments, the two or more STAT-recruiting domains may be joined in tandem with or without a linker. In some embodiments, the linker comprises one or more amino acid residues.
(92) In some embodiments, the STAT-recruiting domain comprises portions of more than one receptor, e.g. comprising more than one STAT-recruiting domain. In such embodiments, a tandem cytokine signaling domain is provided, allowing for enhanced signaling. Accordingly, in some embodiments, the STAT-recruiting domain of a monomer of the CACCR of the disclosure comprises the STAT-recruiting domains from more than one receptor, e.g. comprises the STAT-recruiting domains from two, three, four, five, or even six receptors. For example, in some embodiments, STAT-recruiting domains can be linked in tandem to stimulate multiple pathways (e.g., the IL7R(316-459)-IL12Rb2(775-825) fragment fusion for pro-persistence STAT5 and pro-inflammatory STAT4; IL7R(316-459)-IL2Rbsmall(393-433, 518-551) for pro-persistence; IL7R(316-459)-EGFR(1122-1165) for pro-persistence and anti-exhaustion; IL2Rbsmall(393-433, 518-551)-EGFR(1122-1165) for pro-persistence and anti-exhaustion).
(93) When generating multiple outputs, the proximity of individual STAT-recruiting domains to the cell membrane can influence the strength of their respective signaling outputs. Table 2c shows examples of CACCRs with the dual outputs, where each output can be placed either proximal or distal to the cell membrane. In some embodiments, the CACCRs of the disclosure comprise a recruiting domain with dual outputs selected from Table 2c.
(94) TABLE-US-00006 TABLE 2c Examples of CACCRs with dual outputs Membrane Membrane Dual output STAT-recruiting domain proximal distal IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL21R(322- IL21R(322-538) (393- 433, 518- 538) 551) IL2Rb(333-551)/IL21R(322-538) IL2Rb(333- IL21R(322- 551) 538) IL21R(322-538)/ IL21R(322- IL2Rbsmall IL2Rbsmall(393-433, 518-551) 538) (393- 433, 518- 551) IL21R(322-538)/IL2Rb(333-551) IL21R(322- IL2Rb(333- 538) 551) IL2Rbsmall(339-379, 393-433, 518- IL2Rbsmall IL21R(322- 551)/IL21R(322-538) (339- 538) 379, 393- 433, 518- 551) IL21R(322-538)/IL2Rbsmall(339- IL21R(322- IL2Rbsmall 379, 393-433, 518-551) 538) (339- 379, 393- 433, 518- 551) IL2Rb(333-551)/IL12Rb1(622-662) IL2Rb(333- IL12Rb1 551) (622-662) IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL12Rb1 IL12Rb1(622-662) (393- (622-662) 433, 518- 551) IL2Rbsmall(339-379, 393-433, 518- IL2Rbsmall IL12Rb1 551)/IL12Rb1(622-662) (339- (622-662) 379, 393- 433, 518- 551) IL12Rb1(622-662)/IL2Rb(333-551) IL12Rb1 IL2Rb(333- (622-662) 551) IL12Rb1(622-662)/IL2Rbsmall(393- IL12Rb1 IL2Rbsmall 433, 518-551) (622-662) (393- 433, 518- 551) IL12Rb1(622-662)/IL2Rbsmall(339- IL12Rb1 IL2Rbsmall 379, 393-433, 518-551) (622-662) (339- 379, 393- 433, 518- 551) IL2Rb(333-551)/IL12Rb2(714-862) IL2Rb(333- IL12Rb2 551) (714-862) IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL12Rb2 IL12Rb2(714-862) (393- (714-862) 433, 518- 551) IL2Rbsmall(339-379, 393-433, 518- IL2Rbsmall IL12Rb2 551)/IL12Rb2(714-862) (339- (714-862) 379, 393- 433, 518- 551) IL2Rb(333-551)/IL12Rb2(775-825) IL2Rb(333- IL12Rb2 551) (775-825) IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL12Rb2 IL12Rb2(775-825) (393- (775-825) 433, 518- 551) IL2Rbsmall(339-379, 393-433, 518- IL2Rbsmall IL12Rb2 551)/IL12Rb2(775-825) (339- (775-825) 379, 393- 433, 518- 551) IL12Rb2(714-862)/IL2Rb(333-551) IL12Rb2 IL2Rb(333- (714-862) 551) IL12Rb2(714-862)/ IL12Rb2 IL2Rbsmall IL2Rbsmall(393-433, 518-551) (714-862) (393- 433, 518- 551) IL12Rb2(714-862)/IL2Rbsmall(339- IL12Rb2 IL2Rbsmall 379, 393-433, 518-551) (714-862) (339- 379, 393- 433, 518- 551) IL12Rb2(775-825)/IL2Rb(333-551) IL12Rb2 IL2Rb(333- (775-825) 551) IL12Rb2(775-825)/IL2Rbsmall(393- IL12Rb2 IL2Rbsmall 433, 518-551) (775-825) (393- 433, 518- 551) IL12Rb2(775-825)/IL2Rbsmall(339- IL12Rb2 IL2Rbsmall 379, 393-433, 518-551) (775-825) (339- 379, 393- 433, 518- 551) IL7Ra (316-459)/IL21R(322-538) IL7Ra (316- IL21R(322- 459) 538) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL21R(322- IL21R(322-538) 416, 424- 538) 459, Y456F) IL21R(322-538)/IL7Ra (316-459) IL21R(322- IL7Ra (316- 538) 459) IL21R(322-538)/IL7Ra(376-416, IL21R(322- IL7Ra (376- 424-459, Y456F) 538) 416, 424- 459, Y456F) IL7Ra (316-459)/IL12Rb1(622-662) IL7Ra (316- IL12Rb1 459) (622-662) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL12Rb1 IL12Rb1(622-662) 416, 424- (622-662) 459, Y456F) IL7Ra (316-459)/IL12Rb2(714-862) IL7Ra (316- IL12Rb2 459) (714-862) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL12Rb2 IL12Rb2(714-862) 416, 424- (714-862) 459, Y456F) IL7Ra (316-459)/IL12Rb2(775-825) IL7Ra (316- IL12Rb2 459) (775-825) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL12Rb2 IL12Rb2(775-825) 416, 424- (775-825) 459, Y456F) IL12Rb1(622-662)/IL7Ra (316-459) IL12Rb1 IL7Ra (316- (622-662) 459) IL12Rb1(622-662)/IL7Ra IL12Rb1 IL7Ra (376- (376-416, 424-459, Y456F) (622-662) 416, 424- 459, Y456F) IL12Rb2(714-862)/IL7Ra (316-459) IL12Rb2 IL7Ra (316- (714-862) 459) IL12Rb2(714-862)/IL7Ra (376-416, IL12Rb2 IL7Ra (376- 424-459, Y456F) (714-862) 416, 424- 459, Y456F) IL12Rb2(775-825)/IL7Ra (316-459) IL12Rb2 IL7Ra (316- (775-825) 459) IL12Rb2(775-825)/IL7Ra (376-416, IL12Rb2 IL7Ra (376- 424-459, Y456F) (775-825) 416, 424- 459, Y456F) IL7Ra (316-459)/IL2Rb(333-551) IL7Ra (316- IL2Rb(333- 459) 551) IL7Ra (376-416, 424-459, IL7Ra (376- IL2Rb(333- Y456F)/IL2Rb(333-551) 416, 424- 551) 459, Y456F) IL7Ra (316-459)/ IL7Ra (316- IL2Rbsmall IL2Rbsmall(393-433, 518-551) 459) (393-433, 518-551) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL2Rbsmall IL2Rbsmall(393-433, 518-551) 416, 424- (393-433, 459, Y456F) 518-551) IL7Ra (316-459)/IL2Rbsmall(339-379, IL7Ra (316- IL2Rbsmall 393-433, 518-551) (339-379, 393-433, 459) 518-551) IL7Ra (376-416, 424-459, Y456F)/ IL7Ra (376- IL2Rbsmall IL2Rbsmall(339-379, 416, 424- (339-379, 393-433, 518-551) 459, Y456F) 393-433, 518-551) IL2Rb(333-551)/IL7Ra (316-459) IL2Rb(333- IL7Ra (316- 551) 459) IL2Rb(333-551)/ IL2Rb(333- IL7Ra (376- IL7Ra (376-416, 424-459, Y456F) 551) 416, 424- 459, Y456F) IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL7Ra (316- IL7Ra (316-459) (393-433, 459) 518-551) IL2Rbsmall(393-433, 518-551)/ IL2Rbsmall IL7Ra (376- IL7Ra (376-416, 424-459, Y456F) (393-433, 416, 424- 518-551) 459, Y456F) IL2Rbsmall(339-379, 393-433, IL2Rbsmall IL7Ra (316- 518-551)/IL7Ra (316-459) (339-379, 459) 393-433, 518-551) IL2Rbsmall(339-379, 393-433, 518-551)/ IL2Rbsmall IL7Ra (376- IL7Ra (376-416, 424-459, Y456F) (339-379, 416, 424- 393-433, 459, Y456F) 518-551) IL12Rb1(622-662)/IL21R (322-538) IL12Rb1 IL21R(322- (622-662) 538) IL12Rb2(714-862)/IL21R (322-538) IL12Rb2 IL21R(322- (714-862) 538) IL12Rb2(775-825)/IL21R (322-538) IL12Rb2 IL21R(322- (775-825) 538) IL21R (322-538)/IL12Rb1(622-662) IL21R(322- IL12Rb1 538) (622-662) IL21R (322-538)/IL12Rb2(714-862) IL21R(322- IL12Rb2 538) (714-862) IL21R (322-538)/IL12Rb2(775-825) IL21R(322- IL12Rb2 538) (775-825)
(95) Without being bound to theory or mechanism, in some embodiments, a JAK-protein (JAK1, JAK2, JAK3, or TYK2) is bound to a dimerized CACCR of the disclosure. The two bound JAK-proteins are activated, which are capable of phosphorylating tyrosine residues on the recruiting domain of the CACCR. The phosphorylated recruiting domains are then capable of binding the recruited proteins (e.g. a phosphorylated STAT-recruiting domain binds a STAT-protein), which in turn effectuate transcription events in the nucleus.
D. Exemplary CACCRs
(96) Table 3 shows exemplary CACCR sequences of the disclosure. The receptors may be expressed with a signal sequence, e.g. a CD8SS of sequence MALPVTALLLPLALLLHAARP (SEQ ID NO: 89).
(97) In some embodiments, the CACCR of the disclosure comprises any one of the sequences in Table 3. In some embodiments, the CACCR comprises an amino acid sequence that is at least about 800%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to any one of the amino acid sequences of SEQ ID NO: 90-98, and 107-139. In some embodiments, the CACCR of the disclosure comprises any one of the amino acid sequences of SEQ ID NO: 90-100, 107-139, 143, and 180-186.
(98) In some embodiments, the CACCR comprises the transmembrane domain and/or JAK-binding domain derived from the TPOR/MPLR receptor. In some embodiments, the CACCR of the disclosure comprises amino acids 478-582 of the naturally occurring TPOR/MPLR receptor of SEQ ID NO: 6. In some embodiments, the CACCR of the disclosure comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 17. In some embodiments, the CACCR of the disclosure comprises the amino acid sequence of SEQ ID NO: 17. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 90 or 119, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 90 or 119, with or without a signal sequence.
(99) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises one or more amino acid substitutions at H499, S505, G509 or W515. In some embodiments, the TPOR/MPLR receptor comprises a H499L substitution. In some embodiments, the TPOR/MPLR receptor comprises a S505N substitution. In some embodiments, the TPOR/MPLR receptor comprises a G509N substitution. In some embodiments, the TPOR/MPLR receptor comprises a W515K substitution. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 92, 94, 121, or 123, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 92, 94, 121, or 123, with or without a signal sequence.
(100) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises the H499L and S505N substitutions. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 91, 98, 120, or 127, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 91, 98, 120, or 127, with or without a signal sequence.
(101) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises the H499L and W515K substitutions or the H499L and G509N substitutions. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 97, or 126, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 97, or 126, with or without a signal sequence.
(102) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises the S505N and W515K substitutions. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 96, 107, 109, 111, 113, 115, 117, 125, 128, 129, 132, 134, 136, or 138, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 96, 107, 109, 111, 113, 115, 117, 125, 128, 129, 132, 134, 136, or 138, with or without a signal sequence.
(103) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises the H499L and W515K substitutions. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 93, with or without a signal sequence. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 93, with or without a signal sequence.
(104) In some embodiments, the CACCR of the disclosure comprises the transmembrane domain and/or JAK-binding domain from a TPOR/MPLR receptor that comprises the H499L, S505N and W515K substitutions. In some embodiments, the CACCR further comprises a recruiting domain comprising the amino acid sequence of one or more of the receptor sequences presented in Table 2b. In some embodiments, the CACCR further comprises one or more recruiting domains selected from the group consisting of the STAT-recruiting domains from IL7Ra, IL2Rb, IL12Rb1, IL12Rb2, and IL21R. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL7Ra. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the STAT-recruiting domain from IL7Ra comprises the amino acid sequence of SEQ ID NO: 46, 68, 69, 70, 71 or 72. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL2Rb. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106, or 142. In some embodiments, the STAT-recruiting domain from IL2Rb comprises the amino acid sequence of SEQ ID NO: 47, 73, 74, 75, 76, 77, 78, 106 or 142. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL12Rb1 or IL12Rb2. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the STAT-recruiting domain from IL12Rb1 or IL12Rb2 comprises the amino acid sequence of SEQ ID NO: 67, 86, or 87. In some embodiments, the recruiting domain comprises the STAT-recruiting domain from IL21R. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 54. In some embodiments, the STAT-recruiting domain from IL21R comprises the amino acid sequence of SEQ ID NO: 54. In some embodiments, the CACCR comprises one or more recruiting domains presented in Table 2c. In some embodiments, the recruiting domains comprises the STAT-recruiting domains from IL7Ra and IL2Rb. In some embodiments, the recruiting domain comprises the STAT-recruiting domains from IL7Ra and IL12Rb1. In some embodiments, the recruiting domain comprises the STAT-recruiting domains form IL7Ra and IL12Rb2. In some embodiments, the CACCR comprises the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 95, 108, 110, 112, 114, 116, 118, 124, 130, 131, 133, 135, 137, 139, 180, 181, 182, 184, 185, or 186, with or without a signal sequence. In some embodiments, the signal sequence comprises the amino acid sequence of SEQ ID NO: 89. In some embodiments, the CACCR comprises the amino acid sequence of SEQ ID NO: 95, 108, 110, 112, 114, 116, 118, 124, 130, 131, 133, 135, 137, 139, 180, 181, 182, 184, 185, or 186, with or without a signal sequence. In some embodiments, the signal sequence comprises the amino acid sequence of SEQ ID NO: 89. In some embodiments, the CACCR comprises an extra-cellular ligand binding domain. In some embodiments, the CACCR does not comprise an extra-cellular ligand binding domain. CACCRs are described in co-pending application US2020/0291090, which is hereby incorporated by reference in its entirety.
(105) TABLE-US-00007 TABLE3 ExemplaryCACCRsequences SEQ Receptor Aminoacidsequence IDNO: TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 90 582).IL7Ra(316-459) LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 91 H499L,S505N).IL7Ra LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 92 582;S505N).IL7Ra LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLSAVLGLL 93 H499L,W515K).IL7Ra LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 94 582;W515K).IL7Ra LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 95 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 96 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLSAVLNLL 97 582;H499L, LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR G509N).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 98 H499L,S505N).IL7Ra LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLARDEVEGFLQDTFPQQLEESEKQRLGGDVQSP NCPSEDVVITPESFGRDSSLTCLAGNVSACDAPIL SSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTLPP PFSLQSGILTLNPVAQGQPILTSLGSNQEEAYVTM SSFYQNQ TpoR(478-582; SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 99 S505N,W515K).IL2Rb LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR (393-433,518-551) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLLEDEGVAGAPTGSSPQPLQPLSGEDDAYCTFP SRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQ ELQGQDPTHLV TpoR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 100 H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (339-379,393-433, PLLEQQDKVPEPASLSSNHSLTSCFTNQGYFFFHL 518-551) PDALEIEACQDEGVAGAPTGSSPQPLQPLSGEDD AYCTFPSRDDLLLFSPSGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 107 TPOR/MPLR(478- WISLVTALHLVLGLNAVLGLLLLRKQFPAHYRR 582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL12Rb2 SDTCEEVEPSLLEILPKSSERTPLPLVTPVFRHPPC (714-862) SNWPQREKGIQGHQASEKDMMHSASSPPPPRAL QAESRQLVDLYKVLESRGSDPKPENPACPWTVL PAGDLPTHDGYLPSNIDDLPSHEAPLADSLEELEP QHISLSVFPSSSLHPLTFSCGDKLTLDQLKMRCDS LML CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 108 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL12Rb2 SDTCEEVEPSLLEILPKSSERTPLPLVTPVFRHPPC (714-862) SNWPQREKGIQGHQASEKDMMHSASSPPPPRAL QAESRQLVDLYKVLESRGSDPKPENPACPWTVL PAGDLPTHDGYLPSNIDDLPSHEAPLADSLEELEP QHISLSVFPSSSLHPLTFSCGDKLTLDQLKMRCDS LML CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 109 TPOR/MPLR(478- WISLVTALHLVLGLNAVLGLLLLRKQFPAHYRR 582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL12Rb2 SDTCEEVEPSLLEILPKSSERTPLPLSDPKPENPAC (775-825) PWTVLPAGDLPTHDGYLPSNIDDLPSHEAPLADS LEELEPQ CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 110 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL12Rb2 SDTCEEVEPSLLEILPKSSERTPLPLSDPKPENPAC (775-825) PWTVLPAGDLPTHDGYLPSNIDDLPSHEAPLADS LEELEPQ CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 111 TPOR/MPLR WISLVTALHLVLGLNAVLGLLLLRKQFPAHYRR (478-582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb SDTCEEVEPSLLEILPKSSERTPLPLVTQLLLQQD (333-551) KVPEPASLSSNHSLTSCFTNQGYFFFHLPDALEIE ACQVYFTYDPYSEEDPDEGVAGAPTGSSPQPLQP LSGEDDAYCTFPSRDDLLLFSPSLLGGPSPPSTAP GGSGAGEERMPPSLQERVPRDWDPQPLGPPTPG VPDLVDFQPPPELVLREAGEEVPDAGPREGVSFP WSRPPGQGEFRALNARLPLNTDAYLSLQELQGQ DPTHLV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 112 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb SDTCEEVEPSLLEILPKSSERTPLPLVTQLLLQQD (333-551) KVPEPASLSSNHSLTSCFTNQGYFFFHLPDALEIE ACQVYFTYDPYSEEDPDEGVAGAPTGSSPQPLQP LSGEDDAYCTFPSRDDLLLFSPSLLGGPSPPSTAP GGSGAGEERMPPSLQERVPRDWDPQPLGPPTPG VPDLVDFQPPPELVLREAGEEVPDAGPREGVSFP WSRPPGQGEFRALNARLPLNTDAYLSLQELQGQ DPTHLV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 113 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb SDTCEEVEPSLLEILPKSSERTPLPLDEGVAGAPT (393-433,518-551) GSSPQPLQPLSGEDDAYCTFPSRDDLLLFSPSGQG EFRALNARLPLNTDAYLSLQELQGQDPTHLV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 114 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb(393- SDTCEEVEPSLLEILPKSSERTPLPLDEGVAGAPT 433,518-551) GSSPQPLQPLSGEDDAYCTFPSRDDLLLFSPSGQG EFRALNARLPLNTDAYLSLQELQGQDPTHLV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 115 TPOR/MPLR(478- WISLVTALHLVLGLNAVLGLLLLRKQFPAHYRR 582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb SDTCEEVEPSLLEILPKSSERTPLPLQQDKVPEPAS (339-379,393- LSSNHSLTSCFTNQGYFFFHLPDALEIEACQDEGV 433,518-551) AGAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFS PSGQGEFRALNARLPLNTDAYLSLQELQGQDPTH LV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 116 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL2Rb(339- SDTCEEVEPSLLEILPKSSERTPLPLQQDKVPEPAS 379,393-433,518- LSSNHSLTSCFTNQGYFFFHLPDALEIEACQDEGV 551) AGAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFS PSGQGEFRALNARLPLNTDAYLSLQELQGQDPTH LV CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 117 TPOR/MPLR(478- WISLVTALHLVLGLNAVLGLLLLRKQFPAHYRR 582;S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL7Ra SDTCEEVEPSLLEILPKSSERTPLPLARDEVEGFLQ (316-459).IL12Rb2 DTFPQQLEESEKQRLGGDVQSPNCPSEDVVITPES (775-825) FGRDSSLTCLAGNVSACDAPILSSSRSLDCRESGK NGPHVYQDLLLSLGTTNSTLPPPFSLQSGILTLNP VAQGQPILTSLGSNQEEAYVTMSSFYQNQSDPKP ENPACPWTVLPAGDLPTHDGYLPSNIDDLPSHEA PLADSLEELEPQ CD8SS- MALPVTALLLPLALLLHAARPSDPTRVETATETA 118 TPOR/MPLR(478- WISLVTALLLVLGLNAVLGLLLLRKQFPAHYRR 582;H499L,S505N, LRHALWPSLPDLHRVLGQYLRDTAALSPPKATV W515K).IL7Ra SDTCEEVEPSLLEILPKSSERTPLPLARDEVEGFLQ (316-459).IL12Rb2 DTFPQQLEESEKQRLGGDVQSPNCPSEDVVITPES (775-825) FGRDSSLTCLAGNVSACDAPILSSSRSLDCRESGK NGPHVYQDLLLSLGTTNSTLPPPFSLQSGILTLNP VAQGQPILTSLGSNQEEAYVTMSSFYQNQSDPKP ENPACPWTVLPAGDLPTHDGYLPSNIDDLPSHEA PLADSLEELEPQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 119 582).IL7Ra(316- LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR 459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 120 H499L,S505N).IL7Ra LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 121 582;S505N).IL7Ra LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLSAVLGLL 122 582;H499L, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLSAVLGLL 123 582;W515K).IL7Ra LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR (316-459) DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 124 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 125 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLSAVLNLL 126 582;H499L, LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR G509N).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 127 582;H499L, LLRWQFPAHYRRLRHALWPSLPDLHRVLGQYLR S505N).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459) PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 128 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (333-551) PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ GYFFFHLPDALEIEACQVYFTYDPYSEEDPDEGV AGAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFS PSLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 129 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL12Rb2 DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (714-862) PLLEVTPVFRHPPCSNWPQREKGIQGHQASEKD MMHSASSPPPPRALQAESRQLVDLYKVLESRGS DPKPENPACPWTVLPAGDLPTHDGYLPSNIDDLP SHEAPLADSLEELEPQHISLSVFPSSSLHPLTFSCG DKLTLDQLKMRCDSLML TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 130 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (333-551) PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ GYFFFHLPDALEIEACQVYFTYDPYSEEDPDEGV AGAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFS PSLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 131 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL12Rb2 DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (714-862) PLLEVTPVFRHPPCSNWPQREKGIQGHQASEKD MMHSASSPPPPRALQAESRQLVDLYKVLESRGS DPKPENPACPWTVLPAGDLPTHDGYLPSNIDDLP SHEAPLADSLEELEPQHISLSVFPSSSLHPLTFSCG DKLTLDQLKMRCDSLML TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 132 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL12Rb2 DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (775-825) PLLESDPKPENPACPWTVLPAGDLPTHDGYLPSN IDDLPSHEAPLADSLEELEPQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 133 582;H499L;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL12Rb2 DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (775-825) PLLESDPKPENPACPWTVLPAGDLPTHDGYLPSN IDDLPSHEAPLADSLEELEPQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 134 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (316-459).IL12Rb2 PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ (775-825) SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQSRSDPKPENPACPWTVLPAGDLPTH DGYLPSNIDDLPSHEAPLADSLEELEPQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 135 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL7Ra(316- DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL 459).IL12Rb2(775- PLLEARDEVEGFLQDTFPQQLEESEKQRLGGDVQ 825) SPNCPSEDVVITPESFGRDSSLTCLAGNVSACDAP ILSSSRSLDCRESGKNGPHVYQDLLLSLGTTNSTL PPPFSLQSGILTLNPVAQGQPILTSLGSNQEEAYV TMSSFYQNQSRSDPKPENPACPWTVLPAGDLPTH DGYLPSNIDDLPSHEAPLADSLEELEPQ TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 136 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb(333- DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL 551;Y381S,Y384S, PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ Y387S) GYFFFHLPDALEIEACQVSFTSDPSSEEDPDEGVA GAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFSP SLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 137 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb(333- DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL 551;Y381S,Y384S, PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ Y387S) GYFFFHLPDALEIEACQVSFTSDPSSEEDPDEGVA GAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFSP SLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TPOR/MPLR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 138 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb(333- DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL 551;Y364S,Y381S, PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ Y384S,Y387S) GSFFFHLPDALEIEACQVSFTSDPSSEEDPDEGVA GAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFSP SLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TPOR/MPLR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 139 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb(333- DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL 551;Y364S,Y381S, PLLEVTQLLLQQDKVPEPASLSSNHSLTSCFTNQ Y384S,Y387S) GSFFFHLPDALEIEACQVSFTSDPSSEEDPDEGVA GAPTGSSPQPLQPLSGEDDAYCTFPSRDDLLLFSP SLLGGPSPPSTAPGGSGAGEERMPPSLQERVPRD WDPQPLGPPTPGVPDLVDFQPPPELVLREAGEEV PDAGPREGVSFPWSRPPGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLV TpoR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 143 H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (393-433,518- PLLEDEGVAGAPTGSSPQPLQPLSGEDDAYCTFP 551) SRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQ ELQGQDPTHLV TpoR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 180 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (393-433,518- PLDEGVAGAPTGSSPQPLQPLSGEDDAYCTFPSR 551) DDLLLFSPSGQGEFRALNARLPLNTDAYLSLQEL QGQDPTHLV TpoR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 181 H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (339-379,393- PLQQDKVPEPASLSSNHSLTSCFTNQGYFFFHLPD 433,518-551) ALEIEACQDEGVAGAPTGSSPQPLQPLSGEDDAY CTFPSRDDLLLFSPSGQGEFRALNARLPLNTDAY LSLQELQGQDPTHLV TpoR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 182 H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (393-433,518- PLDEGVAGAPTGSSPQPLQPLSGEDDAYCTFPSR 551) DDLLLFSPSGQGEFRALNARLPLNTDAYLSLQEL QGQDPTHLV TpoR(478- SDPTRVETATETAWISLVTALHLVLGLNAVLGLL 184 582;S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (393-433,518- PLLEDEGVAGAPTGSSPQPLQPLSGEDDAYCTFP 551).P2A SRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQ ELQGQDPTHLVGSGATNFSLLKQAGDVEENPG TpoR(478- SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 185 582;H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (339-379,393-433, PLLEQQDKVPEPASLSSNHSLTSCFTNQGYFFFHL 518-551).P2A PDALEIEACQDEGVAGAPTGSSPQPLQPLSGEDD AYCTFPSRDDLLLFSPSGQGEFRALNARLPLNTD AYLSLQELQGQDPTHLVGSGATNFSLLKQAGD VEENPG TpoR(478-582; SDPTRVETATETAWISLVTALLLVLGLNAVLGLL 186 H499L,S505N, LLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLR W515K).IL2Rb DTAALSPPKATVSDTCEEVEPSLLEILPKSSERTPL (393-433,518- PLLEDEGVAGAPTGSSPQPLQPLSGEDDAYCTFP 551).P2A SRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQ ELQGQDPTHLVGSGATNFSLLKQAGDVEENPG *The underlined LE and SR are exemplary optional linker that may be inserted between two domains.
E. Expression of CACCRs
(106) Provided herein are polynucleotides encoding any one of the CACCRs provided herein. Likewise, provided herein are expression vectors comprising such polynucleotides. In some embodiments, the vector is a viral vector. In some embodiments, the vector is not a viral vector. In some embodiments, the vector is a lentiviral vector. In some embodiments, the expression vector comprises a promoter, which may be selected from those known in the art. An exemplary promoter that can be used in the invention is the human elongation factor-1 alpha (EF-1 alpha or EF-1?) promoter, which may be used in its full-length form, or truncated forms, or other variant forms (as described in the literature and disclosed in, e.g., Wakabayashi-Ito, N. et al., J. Biol. Chem. 1994:269(47): 29831-29837; Montiel-Equihua, C. A. et al., Mol. Therapy, 2012, 20(7): 1400-1409). Any version of the EF1 alpha promoter is suitable and may be used as the sole promoter or together with other promoter elements. In some embodiments, the expression vector is a lentiviral vector and the promoter is a full-length EF-1 alpha promoter. Exemplary full-length EF1 alpha promoter is shown below:
(107) TABLE-US-00008 (SEQIDNO:187) GCGTGAGGCTCCGGTGCCCGTCAGTGGGCAGAGCGCACATCGCCCACAG TCCCCGAGAAGTTGGGGGGAGGGGTCGGCAATTGAACCGGTGCCTAGAG AAGGTGGCGCGGGGTAAACTGGGAAAGTGATGTCGTGTACTGGCTCCGC CTTTTTCCCGAGGGTGGGGGAGAACCGTATATAAGTGCAGTAGTCGCCG TGAACGTTCTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTAAGTGC CGTGTGTGGTTCCCGCGGGCCTGGCCTCTTTACGGGTTATGGCCCTTGC GTGCCTTGAATTACTTCCACGCCCCTGGCTGCAGTACGTGATTCTTGAT CCCGAGCTTCGGGTTGGAAGTGGGTGGGAGAGTTCGAGGCCTTGCGCTT AAGGAGCCCCTTCGCCTCGTGCTTGAGTTGAGGCCTGGCCTGGGCGCTG GGGCCGCCGCGTGCGAATCTGGTGGCACCTTCGCGCCTGTCTCGCTGCT TTCGATAAGTCTCTAGCCATTTAAAATTTTTGATGACCTGCTGCGACGC TTTTTTTCTGGCAAGATAGTCTTGTAAATGCGGGCCAAGATCTGCACAC TGGTATTTCGGTTTTTGGGGCCGCGGGCGGCGACGGGGCCCGTGCGTCC CAGCGCACATGTTCGGCGAGGCGGGGCCTGCGAGCGCGGCCACCGAGAA TCGGACGGGGGTAGTCTCAAGCTGGCCGGCCTGCTCTGGTGCCTGGCCT CGCGCCGCCGTGTATCGCCCCGCCCTGGGCGGCAAGGCTGGCCCGGTCG GCACCAGTTGCGTGAGCGGAAAGATGGCCGCTTCCCGGCCCTGCTGCAG GGAGCTCAAAATGGAGGACGCGGCGCTCGGGAGAGCGGGCGGGTGAGTC ACCCACACAAAGGAAAAGGGCCTTTCCGTCCTCAGCCGTCGCTTCATGT GACTCCACGGAGTACCGGGCGCCGTCCAGGCACCTCGATTAGTTCTCGA GCTTTTGGAGTACGTCGTCTTTAGGTTGGGGGGAGGGGTTTTATGCGAT GGAGTTTCCCCACACTGAGTGGGTGGAGACTGAAGTTAGGCCAGCTTGG CACTTGATGTAATTCTCCTTGGAATTTGCCCTTTTTGAGTTTGGATCTT GGTTCATTCTCAAGCCTCAGACAGTGGTTCAAAGTTTTTTTCTTCCATT TCAGGTGTCGTGA
(108) Exemplary EF1 alpha short promoter is shown below:
(109) TABLE-US-00009 (SEQIDNO:188) GCGTGAGGCTCCGGTGCCCGTCAGTGGGCAGAGCGCACATCGCCCACAG TCCCCGAGAAGTTGGGGGGAGGGGTCGGCAATTGAACCGGTGCCTAGAG AAGGTGGCGCGGGGTAAACTGGGAAAGTGATGTCGTGTACTGGCTCCGC CTTTTTCCCGAGGGTGGGGGAGAACCGTATATAAGTGCAGTAGTCGCCG TGAACGTTCTTTTTCGCAACGGGTTTGCCGCCAGAACACAG
(110) In some embodiments, the expression vector comprises a polynucleotide expressing a CACCR and a polynucleotide expressing a chimeric antigen receptor (CAR).
(111) In some embodiments, the CACCR and the CAR are expressed as a single polypeptide chain, separated by a linker.
(112) II. CAR-Bearing Immune Cells
(113) Provided herein are engineered immune cells comprising a polynucleotide encoding a B-cell maturation antigen (BCMA) chimeric antigen receptor (CAR) and a CACCR of the disclosure; and provided herein are engineered immune cells expressing a BCMA chimeric antigen receptor (BCMA CAR-T cell) and a CACCR of the disclosure. Examples of immune cells include T cells, e.g., alpha/beta T cells and gamma/delta T cells, B cells, natural killer (NK) cells, natural killer T (NKT) cells, invariant NKT cells, mast cells, myeloid-derived phagocytes, dendritic cells, killer dendritic cells, macrophages, and monocytes. In some embodiments, the engineered immune cells are CD4+ and/or CD8+ T cells. In some embodiments, the engineered immune cells are T cells exerting one or more T cell effector functions (or effector T cells). Immune cells also refer to cells derived from, for example without limitation, a stem cell. The stem cells can be adult stem cells, non-human embryonic stem cells, more particularly non-human stem cells, cord blood stem cells, progenitor cells, bone marrow stem cells, induced pluripotent stem cells, totipotent stem cells or hematopoietic stem cells. The immune cells can be obtained from a natural source such as from a human patient or can be prepared from, for example, donor cells, stem cells or non-stem cells, according to methods known in the art.
(114) Accordingly, in some embodiments, provided herein are BCMA CAR-T cells comprising a CACCR of the disclosure.
(115) In some embodiments, a BCMA CAR can comprise an extracellular ligand-binding domain (e.g., a single chain variable fragment (scFv)), a transmembrane domain, and an intracellular signaling domain. In some embodiments, the extracellular ligand-binding domain, transmembrane domain, and intracellular signaling domain are in one polypeptide, i.e., in a single chain. Multichain BCMA CARs and polypeptides are also provided herein. In some embodiments, the multichain BCMA CARs comprise: a first polypeptide comprising a transmembrane domain and at least one extracellular ligand-binding domain, and a second polypeptide comprising a transmembrane domain and at least one intracellular signaling domain, wherein the polypeptides assemble together to form a multichain CAR.
(116) The extracellular ligand-binding domain of a BCMA CAR specifically binds to BCMA.
(117) In some embodiments, the extracellular ligand-binding domain of a BCMA CAR comprises an scFv comprising the light chain variable (VL) region and the heavy chain variable (VH) region of a BCMA specific monoclonal antibody joined by a flexible linker. Single chain variable region fragments are made by linking light and/or heavy chain variable regions by using a short linking peptide (Bird et al., Science 242:423-426, 1988) (e.g. glycine-serine containing linkers). In general, linkers can be short, flexible polypeptides and are generally comprised of about 20 or fewer amino acid residues. Linkers can in turn be modified for additional functions, such as attachment of drugs or attachment to solid supports. The single chain variants can be produced either recombinantly or synthetically. For synthetic production of scFv, an automated synthesizer can be used. For recombinant production of scFv, a suitable plasmid containing polynucleotide that encodes the scFv can be introduced into a suitable host cell, either eukaryotic, such as yeast, plant, insect or mammalian cells, or prokaryotic, such as E. coli. Polynucleotides encoding the scFv of interest can be made by routine manipulations such as ligation of polynucleotides. The resultant scFv can be isolated using standard protein purification techniques known in the art.
(118) The intracellular signaling domain of a BCMA CAR according to the invention is responsible for intracellular signaling following the binding of extracellular ligand-binding domain to the target resulting in the activation of the immune cell and immune response (Signals 1 and/or 2). The intracellular signaling domain has the ability to activate at least one of the normal effector functions of the immune cell in which the CAR is expressed. For example, the effector function of a T cell can be a cytolytic activity or helper activity including the secretion of cytokines.
(119) In some embodiments, an intracellular signaling domain for use in a BCMA CAR can be the cytoplasmic sequences of, for example without limitation, the T cell receptor and co-receptors that act in concert to initiate signal transduction following antigen receptor engagement, as well as any derivative or variant of these sequences and any synthetic sequence that has the same functional capability. Intracellular signaling domains comprise two distinct classes of cytoplasmic signaling sequences: those that initiate antigen-dependent primary activation, and those that act in an antigen-independent manner to provide a secondary or co-stimulatory signal. Primary cytoplasmic signaling sequences can comprise signaling motifs which are known as immunoreceptor tyrosine-based activation motifs or ITAMs. ITAMs are well defined signaling motifs found in the intracytoplasmic tail of a variety of receptors that serve as binding sites for syk/zap70 class tyrosine kinases. Examples of ITAMs used in the invention can include as non-limiting examples those derived from TCR?, FcR?, FcR?, FcR?, CD3?, CD3?, CD3?, CD5, CD22, CD79a, CD79b and CD66d. In some embodiments, the intracellular signaling domain of the BCMA CAR can comprise the CD3? signaling domain. In some embodiments the intracellular signaling domain of the BCMA CAR of the invention comprises a domain of a co-stimulatory molecule.
(120) In some embodiments, the intracellular signaling domain of a BCMA CAR of the invention comprises a part of co-stimulatory molecule selected from the group consisting of fragment of 4-1BB (GenBank: AAA53133) and CD28 (NP_006130.1).
(121) CARs are expressed on the surface membrane of the cell. Thus, the BCMA CAR comprises a transmembrane domain. Suitable transmembrane domains for a BCMA CAR disclosed herein have the ability to (a) be expressed at the surface of a cell, preferably an immune cell such as, for example without limitation, lymphocyte cells or Natural killer (NK) cells, and (b) interact with the ligand-binding domain and intracellular signaling domain for directing cellular response of immune cell against a predefined target cell. The transmembrane domain can be derived either from a natural or from a synthetic source. The transmembrane domain can be derived from any membrane-bound or transmembrane protein. As non-limiting examples, the transmembrane polypeptide can be a subunit of the T cell receptor such as ?, ?, ? or ?, polypeptide constituting CD3 complex, IL-2 receptor p55 (a chain), p75 (? chain) or ? chain, subunit chain of Fc receptors, in particular Fc? receptor III or CD proteins. Alternatively, the transmembrane domain can be synthetic and can comprise predominantly hydrophobic residues such as leucine and valine. In some embodiments said transmembrane domain is derived from the human CD8a chain (e.g., NP_001139345.1).
(122) The transmembrane domain of the BCMA CAR can further comprise a stalk domain between the extracellular ligand-binding domain and said transmembrane domain. A stalk domain may comprise up to 300 amino acids, preferably 10 to 100 amino acids and most preferably 25 to 50 amino acids. Stalk region may be derived from all or part of naturally occurring molecules, such as from all or part of the extracellular region of CD8, CD4, or CD28, or from all or part of an antibody constant region. Alternatively, the stalk domain may be a synthetic sequence that corresponds to a naturally occurring stalk sequence, or may be an entirely synthetic stalk sequence. In some embodiments said stalk domain is a part of human CD8? chain (e.g., NP_001139345.1).
(123) In another particular embodiment, said transmembrane and hinge domains of the BCMA CAR comprise a part of human CD8? chain.
(124) Table 4 provides exemplary sequences of CAR components that can be used in the BCMA CARs disclosed herein and the antibody and/or CAR sequences exemplified herein.
(125) TABLE-US-00010 TABLE4 AminoAcidSequencesrelatingtoBCMACARs SEQ Domain Aminoacidsequence IDNO: CD8hingeand TTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGAV 101 transmembrane HTRGLDFACDIYIWAPLAGTCGVLLLSLVITLYC 4-1BBintracellular KRGRKKLLYIFKQPFMRPVQTTQEEDGCSCRFPE 102 signaling EEEGGCEL CD3zintracellular RVKFSRSADAPAYQQGQNQLYNELNLGRREEYD 103 signaling VLDKRRGRDPEMGGKPRRKNPQEGLYNELQKD KMAEAYSEIGMKGERRRGKGHDGLYQGLSTAT KDTYDALHMQALPPR BFP MSELIKENMHMKLYMEGTVDNHHFKCTSEGEG 104 KPYEGTQTMRIKVVEGGPLPFAFDILATSFLYGS KTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGG VLTATQDTSLQDGCLIYNVKIRGVNFTSNGPVM QKKTLGWEAFTETLYPADGGLEGRNDMALKLV GGSHLIANIKTTYRSKKPAKNLKMPGVYYVDYR LERIKEANNETYVEQHEVAVARYCDLPSKLGHK LN P2A GSGATNFSLLKQAGDVEENPGP 105 P5A2anti-BCMAscFv EVQLLESGGGLVQPGGSLRLSCAAS 140 GFTFSSYAMNWVRQAPGKGLEWVS AISDSGGSTYYADSVKGRFTISRDN SKNTLYLQMNSLRAEDTAVYYCAR YWPMDIWGQGTLVTVSSGGGGSGG GGSGGGGSEIVLTQSPGTLSLSPGE RATLSCRASQSVSSSYLAWYQQKP GQAPRLLMYDASIRATGIPDRFSGS GSGTDFTLTISRLEPEDFAVYYCQQ YGSWPLTFGQGTKVEIK P5A2anti-BCMACAR (MALPVTALLLPLALLLHAARP)EVQ 141 [includingsafetyswitch, LLESGGGLVQPGGSLRLSCAASGFT theparenthesesindicate FSSYAMNWVRQAPGKGLEWVSAIS signalsequence] DSGGSTYYADSVKGRFTISRDNSKN TLYLQMNSLRAEDTAVYYCARYWP MDIWGQGTLVTVSSGGGGSGGGGS GGGGSEIVLTQSPGTLSLSPGERAT LSCRASQSVSSSYLAWYQQKPGQA PRLLMYDASIRATGIPDRFSGSGSG TDFTLTISRLEPEDFAVYYCQQYGS WPLTFGQGTKVEIKGSGGGGSCPY SNPSLCSGGGGSCPYSNPSLCSGGG GSTTTPAPRPPTPAPTIASQPLSLRP EACRPAAGGAVHTRGLDFACDIYI WAPLAGTCGVLLLSLVITLYCKRG RKKLLYIFKQPFMRPVQTTQEEDGC SCRFPEEEEGGCELRVKFSRSADAP AYQQGQNQLYNELNLGRREEYDVL DKRRGRDPEMGGKPRRKNPQEGLY NELQKDKMAEAYSEIGMKGERRRG KGHDGLYQGLSTATKDTYDALHM QALPPR P5A2VH EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAM 144 NWVRQAPGKGLEWVSAISDSGGSTYYADSVKG RFTISRDNSKNTLYLQMNSLRAEDTAVYYCARY WPMDIWGQGTLVTVSS P5A2VL EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLA 145 WYQQKPGQAPRLLMYDASIRATGIPDRFSGSGSG TDFTLTISRLEPEDFAVYYCQQYGSWPLTFGQGT KVEIK VHCDR1(Kabat) SYAMN 146 VHCDR1(Chothia); GFTFSSY 147 VHCDR1(extended) GFTFSSYAMN 148 VHCDR2(Chothia) AISDSGGSTYYADSVKG 149 VHCDR2(Kabat) SDSGGS 150 VHCDR3 YWPMDI 151 VLCDR1 RASQSVSSSYLA 152 VLCDR2 DASIRAT 153 VLCDR3 QQYGSWPLT 154 C29VH EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYPM 155 SWVRQAPGKGLEWVSAIGGSGGSLPYADSVKGR FTISRDNSKNTLYLQMNSLRAEDTAVYYCARYW PMDIWGQGTLVTVSS C29VL EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLA 156 WYQQKPGQAPRLLMYDASIRATGIPDRFSGSGSG TDFTLTISRLEPEDFAVYYCQQYQSWPLTFGQGT KVEIK VHCDR1(Kabat) SYPMS 157 VHCDR1(Chothia); GFTFSSY 158 VHCDR1(extended) GFTFSSYPMS 159 VHCDR2(Chothia) AIGGSGGSLPYADSVKG 160 VHCDR2(Kabat) GGSGGS 161 VHCDR3 YWPMDI 162 VLCDR1 RASQSVSSSYLA 163 VLCDR2 DASIRAT 164 VLCDR3 QQYQSWPLT 165 P5A2BCMACAR EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAM 166 withoutasignalsequence NWVRQAPGKGLEWVSAISDSGGSTYYADSVKG RFTISRDNSKNTLYLQMNSLRAEDTAVYYCARY WPMDIWGQGTLVTVSSGGGGSGGGGSGGGGSEI VLTQSPGTLSLSPGERATLSCRASQSVSSSYLAW YQQKPGQAPRLLMYDASIRATGIPDRFSGSGSGT DFTLTISRLEPEDFAVYYCQQYGSWPLTFGQGTK VEIKGSGGGGSCPYSNPSLCSGGGGSCPYSNPSLC SGGGGSTTTPAPRPPTPAPTIASQPLSLRPEACRPA AGGAVHTRGLDFACDIYIWAPLAGTCGVLLLSL VITLYCKRGRKKLLYIFKQPFMRPVQTTQEEDGC SCRFPEEEEGGCELRVKFSRSADAPAYQQGQNQL YNELNLGRREEYDVLDKRRGRDPEMGGKPRRK NPQEGLYNELQKDKMAEAYSEIGMKGERRRGK GHDGLYQGLSTATKDTYDALHMQALPPR Linker GGGGSGGGGSGGGGS 167 Off-switch(R2) GSGGGGSCPYSNPSLCSGGGGSCPYSNPSLCSGG 168 GGS CD8Hinge TTTPAPRPPTPAPTIASQPLSLRPEACRPAAGGAV 169 HTRGLDFACD CD8TM IYIWAPLAGTCGVLLLSLVIT 170 rituximabmimotope CPYSNPSLC 183
(126) In some embodiments of the BCMA CAR, the intracellular signaling domain comprises a CD3? signaling domain. In some embodiments of the BCMA CAR, the intracellular signaling domain comprises a CD3? signaling domain and additionally a second signaling domain. In some embodiments of the BCMA CAR, the intracellular signaling domain comprises a CD3? signaling domain and a 4-1BB signaling domain. In some embodiments, the BCMA CARs disclosed herein comprise an extracellular ligand-binding domain that specifically binds BCMA, human CD8a hinge and transmembrane domains, the CD3? signaling domain, and 4-1BB signaling domain. In some embodiments, the BCMA specific CAR comprises the amino acid sequence of SEQ ID NO: 140 or 141. In some embodiments, the BCMA specific CAR comprises or consists of the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 140. In some embodiments, the BCMA specific CAR comprises or consists of the amino acid sequence that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 141. In some embodiments, the BCMA CAR comprises the amino acid sequence of SEQ ID NO: 141, without the CD8 alpha leader sequence or signal sequence (MALPVTALLLPLALLLHAARP, SEQ ID NO: 89). In some embodiments, the BCMA CAR comprises the amino acid sequence of SEQ ID NO: 166.
(127) In some embodiments, a BCMA CAR of SEQ ID NO: 141 is encoded by the DNA sequence of SEQ ID NO: 171.
(128) TABLE-US-00011 TABLE5 BCMACARnucleotidesequences SEQ ID Name Nucleotidesequence NO: BCMA ATGGCACTGCCCGTGACCGCCCTGCTGCTGCCTCTGGCCC 171 CAR TGCTGCTGCACGCCGCCCGGCCTGAGGTGCAGCTGCTGG nt AGAGCGGAGGAGGCCTGGTGCAGCCAGGAGGCAGCCTG AGACTGTCCTGCGCAGCCTCTGGCTTCACCTTCAGCAGCT ACGCCATGAACTGGGTGAGGCAGGCACCTGGCAAGGGCC TGGAGTGGGTGAGCGCCATCTCCGACTCTGGCGGCAGCA CCTACTATGCCGATTCCGTGAAGGGCCGCTTCACAATCAG CCGGGATAACTCCAAGAATACCCTGTACCTGCAGATGAA CAGCCTGAGAGCCGAGGATACAGCCGTGTACTATTGCGC CAGGTATTGGCCAATGGACATCTGGGGCCAGGGCACACT GGTGACCGTGTCTAGCGGCGGAGGAGGCTCCGGAGGAGG AGGCTCTGGCGGCGGCGGCAGCGAGATCGTGCTGACACA GTCTCCAGGCACCCTGAGCCTGTCCCCAGGAGAGAGAGC CACCCTGAGCTGTAGGGCCTCTCAGAGCGTGTCCTCTAGC TACCTGGCCTGGTATCAGCAGAAGCCAGGCCAGGCCCCC AGACTGCTGATGTACGACGCCAGCATCAGGGCAACAGGC ATCCCCGATCGGTTCTCCGGCTCTGGCAGCGGCACCGACT TTACACTGACCATCAGCAGGCTGGAGCCCGAGGACTTCG CCGTGTACTATTGCCAGCAGTATGGCTCCTGGCCTCTGAC ATTTGGCCAGGGCACCAAGGTGGAGATCAAGGGCTCCGG CGGCGGAGGCTCTTGCCCTTACAGCAACCCATCCCTGTGC TCTGGAGGAGGAGGCTCCTGTCCCTATAGCAATCCCAGC CTGTGCTCCGGCGGAGGAGGCTCTACCACAACCCCTGCA CCACGCCCCCCTACACCAGCACCTACCATCGCCTCTCAGC CTCTGAGCCTGCGGCCCGAGGCCTGTAGGCCCGCCGCCG GCGGCGCCGTGCACACACGGGGCCTGGACTTTGCCTGCG ACATCTACATCTGGGCACCCCTGGCCGGCACATGTGGCG TGCTGCTGCTGAGCCTGGTCATCACCCTGTACTGCAAGAG AGGCAGGAAGAAGCTGCTGTATATCTTCAAGCAGCCCTT CATGCGGCCCGTGCAGACAACCCAGGAGGAGGATGGCTG CTCCTGTCGGTTCCCAGAGGAGGAGGAGGGAGGATGTGA GCTGCGCGTGAAGTTTTCCCGGTCTGCCGACGCACCAGC ATACCAGCAGGGCCAGAACCAGCTGTATAACGAGCTGAA TCTGGGCCGGAGAGAGGAGTACGACGTGCTGGATAAGCG GCGGGGCCGGGACCCCGAGATGGGAGGCAAGCCTCGGA GAAAGAACCCACAGGAGGGCCTGTACAATGAGCTGCAG AAGGATAAGATGGCCGAGGCCTATTCTGAGATCGGCATG AAGGGAGAGAGGCGCCGGGGCAAGGGACACGACGGCCT GTACCAGGGCCTGTCCACAGCCACCAAGGACACCTATGA TGCCCTGCACATGCAGGCCCTGCCACCCAGATGA
(129) In an embodiment, a BCMA CAR polypeptide of the invention comprises the following domains: optionally a leader sequence, a heavy chain variable (VH) region, linker, light chain variable (VL) region, off-switch, CD8 hinge, CD8 transmembrane domain, 4-1BB signaling domain, and a CD3-zeta (CD3z or CD3?) domain. In some aspects of this embodiment, the BCMA CAR polypeptide comprises optionally a leader sequence that comprises the amino acid sequence shown in SEQ ID NO: 89, a VH region that comprises the amino acid sequence shown in SEQ ID NO: 144, a linker sequence that comprises the amino acid sequence shown in SEQ ID NO: 167, a VL region that comprises the amino acid sequence shown in SEQ ID NO: 145, an off-switch region that comprises the amino acid sequence shown in SEQ ID NO: 168, a CD8 hinge region that comprises the amino acid sequence shown in SEQ ID NO: 169, a CD8 TM region that comprises the amino acid sequence shown in SEQ ID NO: 170, a 4-1BB signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 102, and a CD3z signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 103. In some aspects of this embodiment, the BCMA CAR polypeptide comprises optionally a leader sequence that comprises the amino acid sequence shown in SEQ ID NO: 89, a VH region that comprises the amino acid sequence shown in SEQ ID NO: 144, a linker sequence that comprises the amino acid sequence shown in SEQ ID NO: 167, a VL region that comprises the amino acid sequence shown in SEQ ID NO: 145, an off-switch region that comprises the amino acid sequence shown in SEQ ID NO: 168, a CD8 hinge region and TM region that comprises the amino acid sequence shown in SEQ ID NO: 101, a 4-1BB signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 102, and a CD3z signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 103. In some embodiments, a different leader sequence is used.
(130) In other aspects of this embodiment, the BCMA CAR polypeptide comprises optionally a leader sequence that comprises the amino acid sequence shown in SEQ ID NO: 89, a VH region that comprises the amino acid sequence shown in SEQ ID NO: 155, a linker sequence that comprises the amino acid sequence shown in SEQ ID NO: 167, a VL region that comprises the amino acid sequence shown in SEQ ID NO: 156, an off-switch region that comprises the amino acid sequence shown in SEQ ID NO: 168, a CD8 hinge region that comprises the amino acid sequence shown in SEQ ID NO: 169, a CD8 TM region that comprises the amino acid sequence shown in SEQ ID NO: 170, a 4-1BB signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 102, and a CD3z signaling domain that comprises the amino acid sequence shown in SEQ ID NO: 103.
(131) In another embodiment, a BCMA CAR polypeptide of the invention comprises the following domains: optionally a leader sequence, a heavy chain variable (VH) region, linker, light chain variable (VL) region, an off-switch, CD8 hinge, CD8 transmembrane domain, 4-1BB signaling domain, and a CD3-zeta (CD3z or CD3?) domain, wherein the off-switch optionally is omitted and/or only one or the other of the 4-1BB signaling domain and the CD3z signaling domain is present, but not both.
(132) In aspects of either of these embodiments, the extracellular binding region of the BCMA CAR comprises a VH region that comprises a VH CDR1 comprising the amino acid sequence shown in SEQ ID NO: 146, 147, or 148; a VH CDR2 comprising the amino acid sequence shown in SEQ ID NO: 149 or 150; and a VH CDR3 comprising the amino acid sequence shown in SEQ ID NO: 151; and comprises a VL region comprising a VL CDR1 comprising the amino acid sequence shown in SEQ ID NO: 152; a VL CDR2 comprising the amino acid sequence shown in SEQ ID NO: 153; and a VL CDR3 comprising the amino acid sequence shown in SEQ ID NO: 154.
(133) In alternative aspects of either of these embodiments, the extracellular binding region of the BCMA CAR comprises a VH region that comprises a VH CDR1 comprising the amino acid sequence shown in SEQ ID NO: 157, 158 or 159; a VH CDR2 comprising the amino acid sequence shown in SEQ ID NO: 160 or 161; and a VH CDR3 comprising the amino acid sequence shown in SEQ ID NO: 162; and comprises a VL region comprising a VL CDR1 comprising the amino acid sequence shown in SEQ ID NO: 163; a VL CDR2 comprising the amino acid sequence shown in SEQ ID NO: 164; and a VL CDR3 comprising the amino acid sequence shown in SEQ ID NO: 165.
(134) In some embodiments, a BCMA CAR can be introduced into an immune cell as a transgene via a vector. In some embodiments, the vector can also contain, for example, a selection marker which provides for identification and/or selection of cells which received the vector.
(135) In some embodiments of the invention, a bicistronic vector comprising the nucleotide sequence of SEQ ID NO: 172 encodes a predicted CACCR BCMA CAR polypeptide having the predicted amino acid sequence of SEQ ID NO: 173, which comprises the following domains: a CD8 alpha signal sequence (e.g. SEQ ID NO: 89), transmembrane/JAK2 binding domainTpoR(478-582; S505N, W515K) (e.g. SEQ ID NO: 13), IL2Rb(393-433, 518-551) (e.g. SEQ ID NO: 77), P2A (e.g. SEQ ID NO: 105), CD8 alpha signal sequence (e.g., SEQ ID NO:89), and P5A2 anti-BCMA CAR with a safety switch (e.g. SEQ ID NO: 166). In aspects of this embodiment, the bicistronic vector further comprises, following the polypeptide coding sequence, a wild-type woodchuck hepatitis virus posttranscriptional regulatory element WPRE of e.g. nucleotide sequence SEQ ID NO: 174 or a mutant WPRE (mWPRE) of e.g. nucleotide sequence of SEQ ID NO: 175. In other aspects of this embodiment, the bicistronic vector does not include a wild-type WPRE or a mutant WPRE. In some aspects, the disclosure provides an engineered immune cell that comprises the polynucleotide sequence of SEQ ID NO: 172 and expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 184 or 99, and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the disclosure provides an engineered immune cell that expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 180, 184 or 99, and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the engineered immune cell is an engineered T cell. In some embodiments, the engineered T cell is an allogeneic T cell. In some embodiments, the engineered T cell is an autologous T cell.
(136) TABLE-US-00012 SEQIDNO:172: atggccctgccagtgaccgccctgctgctgccactggccctgctgctgc acgcagcaaggccatcagaccctactagagtcgagaccgctaccgagac cgcttggatctctctggtgaccgccctgcacctggtgctgggcctgaac gccgtgctgggcctgctgctgctgaggaagcagttcccagcacactacc ggagactgaggcacgcactgtggccaagcctgcccgacctgcacagggt gctgggacagtatctgagggatacagccgccctgagcccacctaaggca accgtgtccgacacatgcgaggaggtggaaccaagtctgctggaaatcc tgccaaaatcctctgagcggacacccctgcccctgctcgaggacgaggg agtggcaggagcaccaaccggcagctccccccagcctctgcagccactg tccggagaggacgatgcatactgcacattcccttctcgggacgatctgc tgctgttctctccaagcggacagggagagtttcgggccctgaacgccag actgcccctgaataccgacgcctatctgagcctgcaggagctgcaggga caggaccccacacacctggtgggatccggagccaccaacttctccctgc tgaagcaggccggcgatgtggaggagaatccaggccccatggctctgcc cgtcaccgcactgctgctgcccctggctctgctgctgcacgccgcaaga cccgaggtccagctgctggaatctgggggaggactggtgcagcctggag gcagcctgagactgtcctgcgcagcatctggcttcaccttcagctccta cgccatgaactgggtgaggcaggcaccaggcaagggactggagtgggtg tctgccatctccgactctggcggcagcacctactatgccgattccgtga agggccgcttcacaatcagccgggataactccaagaataccctgtacct gcagatgaattccctgagagccgaggatacagccgtgtactattgcgcc aggtattggcccatggacatctggggccagggcacactggtgaccgtgt cttccggaggaggaggctccggaggaggaggctctggcggcggcggcag cgagatcgtgctgacacagtctcctggcaccctgagcctgtccccagga gagagagccaccctgagctgtagggcctctcagagcgtgtcctctagct acctggcctggtatcagcagaagcccggccaggcccctagactgctgat gtacgacgccagcatcagggcaacaggcatccctgatcggttctccggc tctggcagcggaaccgactttacactgaccatcagcaggctggagcccg aggacttcgccgtgtactattgccagcagtatggctcctggcctctgac atttggccagggcaccaaggtggagatcaagggctccggcggcggaggc tcttgcccatacagcaacccatccctgtgctctggaggaggaggctcct gtccttatagcaatcctagcctgtgctccggggaggaggctctaccaca accccagcaccaaggccacctacacctgcaccaaccatcgcctctcagc cactgagcctgagacccgaggcctgtaggcctgcagcaggaggagcagt gcacacccggggactggactttgcctgcgatatctacatctgggcacca ctggcaggaacatgtggcgtgctgctgctgagcctggtcatcaccctgt actgcaagagaggcaggaagaagctgctgtatatcttcaagcagccctt tatgcgccctgtgcagacaacccaggaggaggatggctgctcctgtcgg ttcccagaggaggaggagggaggatgtgagctgcgcgtgaagttttccc ggtctgccgacgcaccagcataccagcagggccagaaccagctgtataa cgagctgaatctgggccggagagaggagtacgacgtgctggataagagg aggggaagagatcccgagatgggaggcaagccacggagaaagaaccccc aggagggcctgtacaatgagctgcagaaggataagatggccgaggccta tagcgagatcggcatgaagggagagaggcgccggggcaagggacacgac ggcctgtatcagggcctgtccaccgctaccaaagacacctatgatgctc tgcacatgcaggctctgccaccaagatga SEQIDNO:173: MALPVTALLLPLALLLHAARPSDPTRVETATETAWISLVTALHLVLGLN AVLGLLLLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLRDTAALSPPKA TVSDTCEEVEPSLLEILPKSSERTPLPLLEDEGVAGAPTGSSPQPLQPL SGEDDAYCTFPSRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQELQG QDPTHLVGSGATNFSLLKQAGDVEENPGPMALPVTALLLPLALLLHAAR PEVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMNWVRQAPGKGLEWV SAISDSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA RYWPMDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPG ERATLSCRASQSVSSSYLAWYQQKPGQAPRLLMYDASIRATGIPDRFSG SGSGTDFTLTISRLEPEDFAVYYCQQYGSWPLTFGQGTKVEIKGSGGGG SCPYSNPSLCSGGGGSCPYSNPSLCSGGGGSTTTPAPRPPTPAPTIASQ PLSLRPEACRPAAGGAVHTRGLDFACDIYIWAPLAGTCGVLLLSLVITL YCKRGRKKLLYIFKQPFMRPVQTTQEEDGCSCRFPEEEEGGCELRVKFS RSADAPAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPRRKNP QEGLYNELQKDKMAEAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDA LHMQALPPR SEQIDNO:174:wtWPRE aatcaacctctggattacaaaatttgtgaaagattgactggtattctta actatgttgctccttttacgctatgtggatacgctgctttaatgccttt gtatcatgctattgcttcccgtatggctttcattttctcctccttgtat aaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggc aacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttg gggcattgccaccacctgtcagctcctttccgggactttcgctttcccc ctccctattgccacggeggaactcategccgcctgccttgcccgctgct ggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggg gaagctgacgtcctttccatggctgctcgcctgtgttgccacctggatt ctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcgg accttccttcccgcggcctgctgccggctctgeggcctcttccgcgtct tcgccttcgccctcagacgagtcggatctccctttgggccgcctccccg cctg SEQIDNO:175:mWPRE aatcaacctctggattacaaaatttgtgaaagattgactggtattctta actatgttgctccttttacgctatgtggatacgctgctttaatgccttt gtatcatgctattgcttcccgtatggctttcattttctcctccttgtat aaatcctggttgctgtctctttatgaggagttgtggcccgttgtcaggc aacgtggcgtggtgtgcactgtgtttgctgacgcaacccccactggttg gggcattgccaccacctgtcagctcctttccgggactttcgctttcccc ctccctattgccacggcggaactcatcgccgcctgccttgcccgctgct ggacaggggctcggctgttgggcactgacaattccgtggtgttgtcggg gaaatcatcgtcctttccttggctgctcgcctgtgttgccacctggatt ctgcgcgggacgtccttctgctacgtcccttcggccctcaatccagcgg accttccttcccgcggcctgctgccggctctgcggcctcttccgcgtct tcgccttcgccctcagacgagtcggatctccctttgggccgcctccccg cctg
(137) In embodiments of the invention, a bicistronic vector comprising the nucleotide sequence of SEQ ID NO: 176 encodes a predicted CACCR BCMA CAR polypeptide having the predicted amino acid sequence of SEQ ID NO: 177, which comprises the following domains: CD8 signal peptide (e.g. SEQ ID NO: 89), transmembrane/JAK2 binding domainTpoR(478-582; H499L, S505N, W515K) (e.g. SEQ ID NO: 12), IL2Rb(339-379, 393-433, 518-551) (e.g. SEQ ID NO: 78), P2A (e.g. SEQ ID NO: 105), CD8 alpha signal sequence (e.g., SEQ ID NO:89), and P5A2 BCMA CAR with a safety switch (e.g. SEQ ID NO: 166). In aspects of this embodiment, the bicistronic vector further comprises, following the polypeptide coding sequence, a wild-type WPRE of e.g. SEQ ID NO: 174 or a mutant WPRE (mWPRE) of e.g. nucleotide sequence of SEQ ID NO: 175. In other aspects of this embodiment, the bicistronic vector does not include a wild-type WPRE or a mutant WPRE. In some aspects, the disclosure provides an engineered immune cell that comprises the polynucleotide sequence of SEQ ID NO: 176 and expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 185 or 100, and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the disclosure provides an engineered immune cell that expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 181, 185 or 100, and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the engineered immune cell is an engineered T cell. In some embodiments, the engineered T cell is an allogeneic T cell. In some embodiments, the engineered T cell is an autologous T cell.
(138) TABLE-US-00013 SEQIDNO:176: atggccctgccagtgaccgccctgctgctgccactggccctgctgctgc acgcagcaaggccatcagaccctactagagtcgagaccgctaccgagac cgcttggatctctctggtgaccgccctgctgctggtgctgggcctgaac gccgtgctgggcctgctgctgctgaggaagcagttcccagcacactacc ggagactgaggcacgcactgtggccaagcctgcccgacctgcacagggt gctgggacagtatctgagggatacagccgccctgagcccacctaaggca accgtgtccgacacatgcgaggaggtggaaccaagtctgctggaaatcc tgccaaaatcctctgageggacacccctgcccctgctcgagcagcagga caaggtgcccgagcctgcctccctgagctccaaccacagcctgacctcc tgctttacaaatcagggctacttctttttccacctgcctgacgccctgg agatcgaggcctgtcaggatgagggagtggcaggagcacctaccggctc tagcccacagccactgcagccactgtctggagaggacgatgcctactgc acattccccagccgggacgatctgctgctgttttccccttctggacagg gagagttccgggccctgaacgcaagactgccactgaataccgacgccta tctgtctctgcaggagctgcagggccaggaccccacacacctggtggga tccggagccaccaacttctccctgctgaagcaggccggcgatgtggagg agaatccaggccccatggctctgcccgtcaccgcactgctgctgcccct ggctctgctgctgcacgccgcaagacccgaggtccagctgctggaatct gggggaggactggtgcagcctggaggcagcctgagactgtcctgcgcag catctggcttcaccttcagctcctacgccatgaactgggtgaggcaggc accaggcaagggactggagtgggtgtctgccatctccgactctggcggc agcacctactatgccgattccgtgaagggccgcttcacaatcagccggg ataactccaagaataccctgtacctgcagatgaattccctgagagccga ggatacagccgtgtactattgcgccaggtattggcccatggacatctgg ggccagggcacactggtgaccgtgtcttccggaggaggaggctccggag gaggaggctctggcggcggcggcagcgagatcgtgctgacacagtctcc tggcaccctgagcctgtccccaggagagagagccaccctgagctgtagg gcctctcagagcgtgtcctctagctacctggcctggtatcagcagaagc ccggccaggcccctagactgctgatgtacgacgccagcatcagggcaac aggcatccctgatcggttctccggctctggcagcggaaccgactttaca ctgaccatcagcaggctggagcccgaggacttcgccgtgtactattgcc agcagtatggctcctggcctctgacatttggccagggcaccaaggtgga gatcaagggctccggcggcggaggctcttgcccatacagcaacccatcc ctgtgctctggaggaggaggctcctgtccttatagcaatcctagcctgt gctccggcggaggaggctctaccacaaccccagcaccaaggccacctac acctgcaccaaccategcctctcagccactgagcctgagacccgaggcc tgtaggcctgcagcaggaggagcagtgcacacccggggactggactttg cctgcgatatctacatctgggcaccactggcaggaacatgtggcgtgct gctgctgagcctggtcatcaccctgtactgcaagagaggcaggaagaag ctgctgtatatcttcaagcagccctttatgcgccctgtgcagacaaccc aggaggaggatggctgctcctgtcggttcccagaggaggaggagggagg atgtgagctgcgcgtgaagttttcccggtctgccgacgcaccagcatac cagcagggccagaaccagctgtataacgagctgaatctgggccggagag aggagtacgacgtgctggataagaggaggggaagagatcccgagatggg aggcaagccacggagaaagaacccccaggagggcctgtacaatgagctg cagaaggataagatggccgaggcctatagcgagatcggcatgaagggag agaggcgccggggcaagggacacgacggcctgtatcagggcctgtccac cgctaccaaagacacctatgatgctctgcacatgcaggctctgccacca agatga SEQIDNO:177 MALPVTALLLPLALLLHAARPSDPTRVETATETAWISLVTALLLVLGLN AVLGLLLLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLRDTAALSPPKA TVSDTCEEVEPSLLEILPKSSERTPLPLLEQQDKVPEPASLSSNHSLTS CFTNQGYFFFHLPDALEIEACQDEGVAGAPTGSSPQPLQPLSGEDDAYC TFPSRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQELQGQDPTHLVG SGATNFSLLKQAGDVEENPGPMALPVTALLLPLALLLHAARPEVQLLES GGGLVQPGGSLRLSCAASGFTFSSYAMNWVRQAPGKGLEWVSAISDSGG STYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYWPMDIW GQGTLVTVSSGGGGSGGGGGGGGSEIVLTQSPGTLSLSPGERATLSCRA SQSVSSSYLAWYQQKPGQAPRLLMYDASIRATGIPDRFSGSGSGTDFTL TISRLEPEDFAVYYCQQYGSWPLTFGQGTKVEIKGSGGGGSCPYSNPSL CSGGGGSCPYSNPSLCSGGGGSTTTPAPRPPTPAPTIASQPLSLRPEAC RPAAGGAVHTRGLDFACDIYIWAPLAGTCGVLLLSLVITLYCKRGRKKL LYIFKQPFMRPVQTTQEEDGCSCRFPEEEEGGCELRVKFSRSADAPAYQ QGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPRRKNPQEGLYNELQ KDKMAEAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQALPPR
(139) In embodiments of the invention, a bicistronic vector comprising the nucleotide sequence of SEQ ID NO: 178 encodes a predicted CACCR BCMA CAR polypeptide having the predicted amino acid sequence of SEQ ID NO: 179, which comprises the following domains: CD8 signal peptide (e.g. SEQ ID NO: 89), transmembrane/JAK2 binding domainTpoR(478-582; H499L, S505N, W515K) (e.g. SEQ ID NO: 12), IL2Rb(393-433, 518-551) (e.g. SEQ ID NO: 77), P2A (e.g. SEQ ID NO: 105), CD8 alpha signal sequence (e.g., SEQ ID NO:89), and P5A2 BCMA CAR with a safety switch (e.g. SEQ ID NO: 141). In aspects of this embodiment, the bicistronic vector further comprises, following the polypeptide coding sequence, a wild-type WPRE of e.g. SEQ ID NO: 174 or a mutant WPRE (mWPRE) of e.g. nucleotide sequence of SEQ ID NO: 175. In other aspects of this embodiment, the bicistronic vector does not include a wild-type WPRE or a mutant WPRE.
(140) In some embodiments, the disclosure provides an engineered immune cell that comprises the polynucleotide sequence of SEQ ID NO: 178 and expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 186 or 143 and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the disclosure provides an engineered immune cell that expresses a CACCR comprising the amino acid sequence of SEQ ID NO: 182, 186 or 143, and a BCMA CAR comprising the amino acid sequence of SEQ ID NO: 166. In some embodiments, the engineered immune cell is an engineered T cell. In some embodiments, the engineered T cell is an allogeneic T cell. In some embodiments, the engineered T cell is an autologous T cell.
(141) TABLE-US-00014 SEQIDNO:178: atggccctgccagtgaccgccctgctgctgccactggccctgctgctgc acgcagcaaggccatcagaccctactagagtcgagaccgctaccgagac cgcttggatctctctggtgaccgccctgctgctggtgctgggcctgaac gccgtgctgggcctgctgctgctgaggaagcagttcccagcacactacc ggagactgaggcacgcactgtggccaagcctgcccgacctgcacagggt gctgggacagtatctgagggatacagccgccctgagcccacctaaggca accgtgtccgacacatgcgaggaggtggaaccaagtctgctggaaatcc tgccaaaatcctctgagcggacacccctgcccctgctcgaggacgaggg agtggcaggagcaccaaccggcagctccccccagcctctgcagccactg tccggagaggacgatgcatactgcacattcccttctcgggacgatctgc tgctgttctctccaagcggacagggagagtttcgggccctgaacgccag actgcccctgaataccgacgcctatctgagcctgcaggagctgcaggga caggaccccacacacctggtgggatccggagccaccaacttctccctgc tgaagcaggccggcgatgtggaggagaatccaggccccatggctctgcc cgtcaccgcactgctgctgcccctggctctgctgctgcacgccgcaaga cccgaggtccagctgctggaatctgggggaggactggtgcagcctggag gcagcctgagactgtcctgcgcagcatctggcttcaccttcagctccta cgccatgaactgggtgaggcaggcaccaggcaagggactggagtgggtg tctgccatctccgactctggcggcagcacctactatgccgattccgtga agggccgcttcacaatcagccgggataactccaagaataccctgtacct gcagatgaattccctgagagccgaggatacagccgtgtactattgcgcc aggtattggcccatggacatctggggccagggcacactggtgaccgtgt cttccggaggaggaggctccggaggaggaggctctggcggcggcggcag cgagatcgtgctgacacagtctcctggcaccctgagcctgtccccagga gagagagccaccctgagctgtagggcctctcagagcgtgtcctctagct acctggcctggtatcagcagaagcccggccaggcccctagactgctgat gtacgacgccagcatcagggcaacaggcatccctgatcggttctccggc tctggcagcggaaccgactttacactgaccatcagcaggctggagcccg aggacttcgccgtgtactattgccagcagtatggctcctggcctctgac atttggccagggcaccaaggtggagatcaagggctccggcggcggaggc tcttgcccatacagcaacccatccctgtgctctggaggaggaggctcct gtccttatagcaatcctagcctgtgctccggcggaggaggctctaccac aaccccagcaccaaggccacctacacctgcaccaaccategcctctcag ccactgagcctgagacccgaggcctgtaggcctgcagcaggaggagcag tgcacacccggggactggactttgcctgcgatatctacatctgggcacc actggcaggaacatgtggcgtgctgctgctgagcctggtcatcaccctg tactgcaagagaggcaggaagaagctgctgtatatcttcaagcagccct ttatgcgccctgtgcagacaacccaggaggaggatggctgctcctgtcg gttcccagaggaggaggagggaggatgtgagctgcgcgtgaagttttcc cggtctgccgacgcaccagcataccagcagggccagaaccagctgtata acgagctgaatctgggccggagagaggagtacgacgtgctggataagag gaggggaagagatcccgagatgggaggcaagccacggagaaagaacccc caggagggcctgtacaatgagctgcagaaggataagatggccgaggcct atagcgagatcggcatgaagggagagaggcgccggggcaagggacacga cggcctgtatcagggcctgtccaccgctaccaaagacacctatgatgct ctgcacatgcaggctctgccaccaagatga SEQIDNO:179: MALPVTALLLPLALLLHAARPSDPTRVETATETAWISLVTALLLVLGLN AVLGLLLLRKQFPAHYRRLRHALWPSLPDLHRVLGQYLRDTAALSPPKA TVSDTCEEVEPSLLEILPKSSERTPLPLLEDEGVAGAPTGSSPQPLQPL SGEDDAYCTFPSRDDLLLFSPSGQGEFRALNARLPLNTDAYLSLQELQG QDPTHLVGSGATNFSLLKQAGDVEENPGPMALPVTALLLPLALLLHAAR PEVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMNWVRQAPGKGLEWV SAISDSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA RYWPMDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPG ERATLSCRASQSVSSSYLAWYQQKPGQAPRLLMYDASIRATGIPDRFSG SGSGTDFTLTISRLEPEDFAVYYCQQYGSWPLTFGQGTKVEIKGSGGGG SCPYSNPSLCSGGGGSCPYSNPSLCSGGGGSTTTPAPRPPTPAPTIASQ PLSLRPEACRPAAGGAVHTRGLDFACDIYIWAPLAGTCGVLLLSLVITL YCKRGRKKLLYIFKQPFMRPVQTTQEEDGCSCRFPEEEEGGCELRVKFS RSADAPAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPRRKNP QEGLYNELQKDKMAEAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDA LHMQALPPR
(142) In some embodiments of the invention, a bicistronic vector encodes a polypeptide that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 173, 177 or 179. In some embodiments, the invention further provides a cell, such as an immune cell, e.g. a T cell, that contains a bicistronic vector that encodes a polypeptide that is at least about 80%, 85%, 90%, 95%, 96%, 98%, 99% or 100% identical to the amino acid sequence of SEQ ID NO: 173, 177 or 179. In some embodiments, the invention further provides a method of treating a disease characterized by the expression of BCMA, such as multiple myeloma, comprising administering such a cell to a patient suffering from the disease.
(143) In some embodiments, the CAR-immune cell (e.g., CAR-T cell) of the disclosure comprises a polynucleotide encoding a suicide polypeptide, such as for example RQR8 or R2. See, e.g., WO2013153391A, which is hereby incorporated by reference in its entirety. In some embodiments, a suicide polypeptide is expressed on the surface of the cell. In some embodiments, a suicide polypeptide is included in the CAR construct. In some embodiments, a suicide polypeptide is not part of the CAR construct.
(144) In some embodiments, the extracellular domain of any one of the CARs disclosed herein may comprise one or more epitopes specific for (specifically recognized by) a monoclonal antibody. These epitopes are also referred to herein as mAb-specific epitopes. Exemplary mAb-specific epitopes are disclosed in International Patent Publication No. WO 2016/120216, which is incorporated herein in its entirety. In these embodiments, the extracellular domain of the CARs comprises antigen binding domains that specifically bind to a target of interest and one or more epitopes that bind to one or more monoclonal antibodies (mAbs). CARs comprising the mAb-specific epitopes can be single-chain or multi-chain.
(145) The inclusion of epitopes specific for monoclonal antibodies in the extracellular domain of the CARs described herein allows sorting and depletion of engineered immune cells expressing the CARs. In some embodiments, allowing for depletion provides a safety switch in case of deleterious effects, e.g., upon administration to a subject.
(146) Methods of preparing engineered immune cells for use in immunotherapy are also provided herein. In some embodiments, the methods comprise introducing a CACCR and a CAR into immune cells, and expanding the cells. In some embodiments, the invention relates to a method of engineering an immune cell comprising: providing a cell and expressing a CACCR, and expressing at the surface of the cell at least one CAR. In some embodiments, the method comprises: transfecting the cell with at least one polynucleotide encoding a CACCR, and at least one polynucleotide encoding a CAR, and expressing the polynucleotides in the cell. In some embodiments, the method comprises: transfecting the cell with at least one polynucleotide encoding a CACCR, at least one polynucleotide encoding a CAR, and expressing the polynucleotides in the cell.
(147) In some embodiments, the polynucleotides encoding the CACCR and CAR are present in one or more expression vectors for stable expression in the cells. In some embodiments, the polynucleotides are present in viral vectors for stable expression in the cells. In some embodiments, the viral vectors may be for example, lentiviral vectors or adenoviral vectors.
(148) In some embodiments, polynucleotides encoding polypeptides according to the present disclosure can be mRNA which is introduced directly into the cells, for example by electroporation. In some embodiments, CytoPulse electroporation technology, such as PulseAgile, can be used to transiently permeabilize living cells for delivery of material into the cells (e.g. U.S. Pat. No. 6,078,490; PCT/US2011/000827; and PCT/US2004/005237). Parameters can be modified in order to determine conditions for high transfection efficiency with minimal mortality.
(149) Also provided herein are methods of transfecting an immune cell, e.g a T cell. In some embodiments, the method comprises: contacting a T cell with RNA and applying to the T cell an agile pulse sequence. In some embodiments, a method of transfecting an immune cell (e.g. T cell) comprising contacting the immune cell with RNA and applying to the cell an agile pulse sequence.
(150) In some embodiments, the method can further comprise a step of genetically modifying a cell by inactivating at least one gene expressing, for example without limitation, a component of the TCR, a target for an immunosuppressive agent, an HLA gene, and/or an immune checkpoint protein such as, for example, PDCD1 or CTLA-4. By inactivating a gene it is intended that the gene of interest is not expressed in a functional protein form. In some embodiments, the gene to be inactivated is selected from the group consisting of, for example without limitation, TCR?, TCR?, CD52, GR, deoxycytidine kinase (DCK), PD-1, and CTLA-4. In some embodiments the method comprises inactivating one or more genes by introducing into the cells a rare-cutting endonuclease able to selectively inactivate a gene by selective DNA cleavage. In some embodiments the rare-cutting endonuclease can be, for example, a transcription activator-like effector nuclease (TALE-nuclease) or CRISPR-based endonuclease (e.g Cas-9 or Cas12a).
(151) In another aspect, a step of genetically modifying cells can comprise: modifying immune cells (e.g. T cells) by inactivating at least one gene expressing a target for an immunosuppressive agent, and; expanding the cells, optionally in the presence of the immunosuppressive agent.
(152) In some embodiments, the engineered immune cells (e.g. T cells) provided herein exhibit improved cytotoxicity, increased expansion, and/or increased levels of memory phenotype markers relative to engineered immune cells that do not express the CACCR.
(153) In some embodiments, the engineered immune cells (e.g. T cells) provided herein exhibit (i) increased in vivo persistence, (ii) increased STAT activation, (iii) increased cytotoxicity, (iv) increased levels of memory phenotype markers, (v) increased expansion (proliferation), or combinations of these functional features constitutively, relative to engineered immune cells that do not express the CACCR. In some embodiments, the improvement in the one or more functional features described herein is tunable, dependent upon the mutations/modifications introduced to the CACCR. In some embodiments, STATs activated by the engineered immune cell comprising one or more CACCRs disclosed are STAT1, STAT2, STAT3, STAT4, STAT5, STAT6, or combinations thereof. In one embodiment, memory phenotype markers that are increased or maintained by the immune cell comprising the CACCR include stem cell memory (Tscm) marker and central memory (Tcm) marker.
(154) In some embodiments, the improvement in one or more functional features exhibited by an engineered immune cell comprising a CACCR provided herein is at least about 2 fold, 2.5 fold, 3 fold, 3.5 fold, 4 fold, 4.5 fold, 5 fold, 6 fold, 7 fold, 8 fold, 9 fold, 10 fold, 15 fold, 20 fold, 25 fold, 30 fold, 40 fold, 50 fold, 60 fold, 70 fold, 80 fold, 90 fold, 100 fold, 125 fold, 150 fold, 200 fold, 250 fold, 300 fold, 350 fold, 400 fold, 450 fold, or even about 500 fold, including values and ranges therebetween, compared to an immune cell that does not express the CACCR.
(155) In some embodiments, the improvement in one or more functional features exhibited by an engineered immune cell comprising a CACCR provided herein is at least about 10%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 70%, 75%, 80%, 90%, 100%, 125%, 150%, 200%, 250%, 300%, 350%, 400%, or even about 500%, including values and ranges therebetween, compared to an engineered immune cell that does not express the CACCR.
(156) III. Therapeutic Methods
(157) Provided herein are pharmaceutical compositions comprising cells bearing the CACCRs and CARs of the disclosure.
(158) Engineered CACCR-bearing and BCMA CAR-bearing immune cells (e.g. BCMA CAR-T cells) obtained by the methods described above, or cell lines derived from such engineered immune cells, can be used as a medicament. In some embodiments, such a medicament can be used for treating a disorder such as for example a viral disease, a bacterial disease, a cancer, an inflammatory disease, an immune disease, or an aging-associated disease. In some embodiments, the cancer is a solid cancer. In some embodiments the cancer is a liquid cancer. The cancer can be selected from the group consisting of gastric cancer, sarcoma, lymphoma, leukemia, head and neck cancer, thymic cancer, epithelial cancer, salivary cancer, liver cancer, stomach cancer, thyroid cancer, lung cancer, ovarian cancer, breast cancer, prostate cancer, esophageal cancer, pancreatic cancer, glioma, leukemia, multiple myeloma, B cell malignancy, diffused large B-cell lymphoma, renal cell carcinoma, bladder cancer, cervical cancer, choriocarcinoma, colon cancer, oral cancer, skin cancer, and melanoma. In some embodiments, the subject is a previously treated adult subject with locally advanced or metastatic melanoma, squamous cell head and neck cancer (SCHNC), ovarian carcinoma, sarcoma, or relapsed or refractory classic Hodgkin's Lymphoma (cHL).
(159) In some embodiments, engineered immune cells, or a cell line derived from the engineered immune cells, can be used in the manufacture of a medicament for treatment of a disorder in a subject in need thereof. In some embodiments, the disorder can be, for example, a cancer, an autoimmune disorder, or an infection.
(160) Also provided herein are methods for treating subjects in need of such treatment.
(161) As used herein, the term subject refers to any vertebrate including, without limitation, humans and other primates (e.g., chimpanzees, cynomolgous monkeys, and other apes and monkey species), farm animals (e.g., cattle, sheep, pigs, goats and horses), domestic mammals (e.g., dogs and cats), laboratory animals (e.g., rabbits, rodents such as mice, rats, and guinea pigs), and birds (e.g., domestic, wild and game birds such as chickens, turkeys and other gallinaceous birds, ducks, geese, and the like). In some embodiments, the subject is a mammal. In exemplary embodiments, the subject is a human.
(162) In some embodiments the method comprises providing immune cells of the disclosure, bearing the CACCRs and CARs (e.g., a BCMA CAR) described herein to a subject in need thereof.
(163) In some embodiments, CACCR and CAR-bearing T cells of the invention can undergo robust in vivo T cell expansion and can persist for an extended amount of time.
(164) Methods of treatment of the invention can be ameliorating, curative or prophylactic. The method of the invention may be either part of an autologous immunotherapy or part of an allogenic immunotherapy treatment.
(165) In another aspect, the invention provides a method of inhibiting tumor growth or progression in a subject who has a tumor, comprising administering to the subject an effective amount of CACCR-expressing and CAR-expressing (e.g., BCMA CAR-expressing) immune cells as described herein. In another aspect, the invention provides a method of inhibiting or preventing metastasis of cancer cells in a subject, comprising administering to the subject in need thereof an effective amount of engineered immune cells as described herein. In another aspect, the invention provides a method of inducing tumor regression in a subject who has a tumor, comprising administering to the subject an effective amount of engineered immune cells as described herein.
(166) In some embodiments, the engineered T cells herein can be administered parenterally in a subject. In some embodiments, the engineered T cells herein can be administered intravenously in a subject.
(167) Also provided is the use of any of the engineered T cells provided herein in the manufacture of a medicament for the treatment of cancer or for inhibiting tumor growth or progression in a subject in need thereof.
(168) In some embodiments, treatment can be administrated into subjects undergoing an immunosuppressive treatment. Indeed, the invention preferably relies on cells or population of cells, which have been made resistant to at least one immunosuppressive agent due to the inactivation of a gene encoding a receptor for such immunosuppressive agent. In this aspect, the immunosuppressive treatment should help the selection and expansion of the T cells according to the invention within the subject. The administration of the cells or population of cells according to the invention may be carried out in any convenient manner, including by aerosol inhalation, injection, ingestion, transfusion, implantation or transplantation. The compositions described herein may be administered to a subject subcutaneously, intradermally, intratumorally, intranodally, intramedullary, intramuscularly, by intravenous or intralymphatic injection, or intraperitoneally. Cells bearing the CACCRs and CARs (e.g. a BCMA CAR) of the disclosure or the pharmaceutical compositions thereof may be administered via one or more of the following routes of administration: intravenous, intraocular, intravitreal, intramuscular, subcutaneous, topical, oral, transdermal, intraperitoneal, intraorbital, by implantation, by inhalation, intrathecal, intraventricular, via the ear, or intranasal.
(169) In some embodiments the administration of the cells or population of cells (bearing the CACCRs and CARs, e.g., a BCMA CAR, of the disclosure) can comprise administration of, for example, about 10.sup.4 to about 10.sup.9 cells per kg body weight including all integer values of cell numbers within those ranges. In some embodiments the administration of the cells or population of cells can comprise administration of about 10.sup.4 to 10.sup.5 cells per kg body weight, 10.sup.5 to 10.sup.6 cells per kg body weight, 10.sup.6 to 10.sup.7 cells per kg body weight, 10.sup.7 to 10.sup.8 cells per kg body weight, or 10.sup.8 to 10.sup.9 cells per kg body weight. The cells or population of cells can be administrated in one or more doses. In some embodiments, said effective amount of cells can be administrated as a single dose. In some embodiments, said effective amount of cells can be administrated as more than one dose over a period of time. Timing of administration is within the judgment of managing physician and depends on the clinical condition of the subject. The cells or population of cells may be obtained from any source, such as a blood bank or a donor. While individual needs vary, determination of optimal ranges of effective amounts of a given cell type for a particular disease or conditions within the skill of the art. An effective amount means an amount which provides a therapeutic or prophylactic benefit. The dosage administrated will be dependent upon the age, health and weight of the recipient, kind of concurrent treatment, if any, frequency of treatment and the nature of the effect desired. In some embodiments, an effective amount of cells or composition comprising those cells are administrated parenterally. In some embodiments, administration can be an intravenous administration. In some embodiments, administration can be directly done by injection within a tumor.
(170) In line with the above, an appropriate dosage of a cell of the invention (e.g., a CACCR-expressing and a BCMA CAR-expressing allogeneic or autologous T cells) may be between about 7?10{circumflex over ()}6 cells and about 480?10{circumflex over ()}6 cells. In certain embodiments, an appropriate dose may range from about 20?10{circumflex over ()}6 cells/dose to about 480?10{circumflex over ()}6 cells/dose, more particularly about 20?10{circumflex over ()}6 cells/dose, about 40?10{circumflex over ()}6 cells/dose, about 60?10{circumflex over ()}6 cells/dose, about 80?10{circumflex over ()}6 cells/dose, about 100?10{circumflex over ()}6 cells/dose, about 120?10{circumflex over ()}6 cells/dose, about 160?10{circumflex over ()}6 cells/dose, about 240?10{circumflex over ()}6 cells/dose, about 300?10{circumflex over ()}6 cells/dose, about 320?10{circumflex over ()}6 cells/dose, about 360?10{circumflex over ()}6 cells/dose, about 400?10{circumflex over ()}6 cells/dose, about 440?10{circumflex over ()}6 cells/dose, or about 480?10{circumflex over ()}6 cells/dose.
(171) In certain embodiments, when the weight of the subject is 50 kg or more, and at least one dose of cells is to be administered to the patient, an appropriate dose may range from about 20?10{circumflex over ()}6 cells/dose to about 480?10{circumflex over ()}6 cells/dose, more particularly about 20?10{circumflex over ()}6 cells/dose, about 40?10{circumflex over ()}6 cells/dose, about 80?10{circumflex over ()}6 cells/dose, about 120?10{circumflex over ()}6 cells/dose, about 240?10{circumflex over ()}6 cells/dose, about 320?10{circumflex over ()}6 cells/dose, about 360?10{circumflex over ()}6 cells/dose, or about 480?10{circumflex over ()}6 cells/dose. In certain embodiments, when the weight of the subject is less than 50 kg, and at least one dose of cells is to be administered to the patient, an appropriate dose may range from about 7?10{circumflex over ()}6 cells/dose to about 360?10{circumflex over ()}6 cells/dose, more particularly about 7?10{circumflex over ()}6 cells/dose, about 14?10{circumflex over ()}6 cells/dose, about 20?10{circumflex over ()}6 cells/dose, about 80?10{circumflex over ()}6 cells/dose, about 240?10{circumflex over ()}6 cells/dose, or about 360?10{circumflex over ()}6 cells/dose.
(172) The methods can further comprise administering one or more agents to a subject prior to administering the engineered immune cells bearing a CAR (e.g., a BCMA CAR) and a CACCR provided herein. In certain embodiments, the agent is a lymphodepleting (preconditioning) regimen. For example, methods of lymphodepleting a subject in need of such therapy comprise administering to the subject specified beneficial doses of cyclophosphamide (between 200 mg/m.sup.2/day and 2000 mg/m.sup.2/day, about 100 mg/m.sup.2/day and about 2000 mg/m.sup.2/day; e.g., about 100 mg/m.sup.2/day, about 200 mg/m.sup.2/day, about 300 mg/m.sup.2/day, about 400 mg/m.sup.2/day, about 500 mg/m.sup.2/day, about 600 mg/m.sup.2/day, about 700 mg/m.sup.2/day, about 800 mg/m.sup.2/day, about 900 mg/m.sup.2/day, about 1000 mg/m.sup.2/day, about 1500 mg/m.sup.2/day or about 2000 mg/m.sup.2/day) and specified doses of fludarabine (between 20 mg/m.sup.2/day and 900 mg/m.sup.2/day, between about 10 mg/m.sup.2/day and about 900 mg/m.sup.2/day; e.g., about 10 mg/m.sup.2/day, about 20 mg/m.sup.2/day, about 30 mg/m.sup.2/day, about 40 mg/m.sup.2/day, about 40 mg/m.sup.2/day, about 50 mg/m.sup.2/day, about 60 mg/m.sup.2/day, about 70 mg/m.sup.2/day, about 80 mg/m.sup.2/day, about 90 mg/m.sup.2/day, about 100 mg/m.sup.2/day, about 500 mg/m.sup.2/day or about 900 mg/m.sup.2/day). An exemplary dosing regimen involves treating a subject comprising administering daily to the patient about 300 mg/m.sup.2/day of cyclophosphamide in combination or before or after administering about 30 mg/m.sup.2/day of fludarabine for three days prior to administration of a therapeutically effective amount of engineered immune cells to the patient.
(173) In some embodiments, notably in the case when the engineered cells provided herein have been gene edited to eliminate or minimize surface expression of CD52, lymphodepletion further comprises administration of an anti-CD52 antibody, such as alemtuzumab (CAS (Chemical Abstract Service) Registry #216503-57-0). In some embodiments, the CD52 antibody is administered at a dose of about 1-20 mg/day IV, e.g., about 13 mg/day IV for 1, 2, 3 or more days, or about 20 mg/day IV for 1, 2, 3 or more days. In some embodiments, the CD52 antibody is administered at a dose of about 20-30 mg/day IV, e.g., about 30 mg/day IV for 1, 2, 3 or more days. The antibody can be administered in combination with, before, or after administration of other elements of a lymphodepletion regime (e.g., cyclophosphamide and/or fludarabine).
(174) In some embodiments, an effective amount of engineered immune cells can be administrated to the patient after the initial or first dosing (i.e., redosing). The second or subsequent dosing can be the same as, or higher or lower than, the amount of engineered immune cells of previous dosing. In some embodiments, a lymphodepleting regimen is administered to the patient before a second or subsequent dosing of the engineered immune cells. In some embodiments, the second or subsequent dosing is not preceded with a lymphodepletion regimen.
(175) In certain embodiments, compositions comprising CACCR and CAR-expressing (e.g., a BCMA CAR-expressing) immune effector cells disclosed herein may be administered in conjunction with any number of chemotherapeutic agents.
(176) In certain embodiments, patients who have received CACCR BCMA CAR T cells of the disclosure are subsequently administered an effective amount of ribuximab and/or dasatinib to reduce or mitigate any potential safety concerns during the course of CAR T treatment. In certain embodiments, the patients receive BCMA CAR T therapy for the treatment of multiple myeloma or other BMCA positive cancers.
(177) IV. Kits and Articles of Manufacture
(178) The present disclosure provides kits comprising any one or more of the CACCR- and CAR-bearing cells described herein (e.g. a cell, for example an immune cell such as a T cell, bearing a CACCR and a BCMA CAR), and pharmaceutical compositions thereof. The present disclosure also provides articles of manufacture comprising any one or more of the CACCR- and CAR-bearing (e.g., BCMA CAR-bearing) CAR-I cells described herein (e.g. a cell, for example an immune cell such as a T cell, bearing a CACCR and a BCMA CAR), pharmaceutical compositions thereof, and kits described herein.
(179) The following examples are included for illustrative purposes and are not intended to limit the scope of the disclosure.
(180) All patent and non-patent documents referenced throughout this disclosure are incorporated by reference herein in their entirety for all purposes.
(181)
EXAMPLES
Example 1: Optimized IL2Rb-Derived Cytotails More Closely Mimic Signaling of IL-15, Rather than IL-2
(182) IL-2 and IL-15 are two cytokines that naturally signal through a heterodimeric cytokine receptor comprised of the common-gamma chain and IL2Rb. In spite of sharing the same native receptors, IL-2 and IL-15 exert different effects on T cell differentiation and persistence. Whereas IL-2 induces short-lived effector differentiation, IL-15 promotes the generation of long-lived memory T cells. Furthermore, increased serum concentrations of IL-15 has been shown to correlate positively with patient response to CAR-T cell therapy. CACCRs that mimic the signaling and effects of IL-15, rather than IL-2, are therefore preferred. We sought to determine if the truncated IL2Rb cytotails more closely mimicked IL-2 or IL-15 signaling.
(183) To this end, we utilized CAR-T cells comprising an exemplary BCMA CAR bearing the P5A2 scFv directed towards BCMA, coupled to rituximab mimotopes, 4-1BB and CD3z signaling domains (see U.S. Pat. No. 10,294,304, incorporated herein by reference). BCMA specific CAR-T cells co-expressing the truncated IL2Rb tails were generated, and their gene expression profiles compared to control CAR-T cells that had been exposed to exogenous recombinant human IL-2 or IL-15. To make lentivirus encoding a CACCR and BCMA CAR, HEK293T cells were plated at 0.45 million cells per mL in 2 mL of DMEM (Gibco) supplemented with 10% FBS (Hyclone) per well of a 6-well plate the day before transfection. On the day of transfection, the lentivirus was prepared by mixing together lentiviral packaging vectors 1.5 ug psPAX2, 0.5 ug pMD2G, and 0.5 ug of the appropriate transfer CAR vector in 250 uL Opti-MEM (Gibco) per well of the 6-well plate (DNA mix). 10 uL Lipofectamine 2000 (Invitrogen) in 250 uL Opti-MEM was incubated at room temperature for 5 minutes and then added to the DNA mix. The mixture was incubated at room temperature for 20 minutes and the total volume of 500 uL was slowly added to the sides of the wells containing HEK293T. One day post-transfection, the media from each well of HEK293T cells in the 6-well plate was replaced with 2 mL per well of T cell transduction media, i.e., X-Vivo-15 supplemented with 10% FBS. Two days post-transfection, the lentiviral supernatants from HEK293T cells were harvested and passed through a 0.45 micron filter (EMD Millipore) to remove cell debris, and crude lentiviral supernatants were used directly for T cell transduction. On Day 0, purified T cells were activated in X-Vivo-15 medium (Lonza) supplemented with 100 IU/mL human IL-2 (Miltenyi Biotec), 10% FBS (Hyclone), and human T TransAct (Miltenyi Biotec, Cat #130-111-160, 1:100 dilution) in a Grex-24 plate (Wilson Wolf, cat #80192M). On Day 2, T cells were resuspended at 0.5 million cells per mL in T cell transduction media, transduced with an equal volume of crude lentiviral supernatant along with 100 IU/mL human IL-2 in a Grex-24 plate. On Day 5, CACCR-expressing CAR-T cells were fed by replacing the spent media with T cell expansion media, i.e., X-Vivo-15 supplemented with 5% human AB serum (Gemini Bio), along with 100 IU/mL human IL-2. At this time, control CAR-T cells lacking CACCR were expanded in either 100 U/mL human IL-2 only, or 100 U/mL human IL-2 and 10 ng/mL human IL-15 (Miltenyi Biotec). Cells were expanded into larger G-Rex vessels (Wilson Wolf) as needed using T cell expansion media and the respective concentrations of recombinant cytokines. On Day 13, cells were stained with the Zombie NIR Fixable Viability Kit (Biolegend), labelled with a BUV395-conjugated CD3 antibody (Biolegend) and an anti-idiotype antibody specific for the P5A2 scFv, then FACS-sorted to enrich for CAR+ T cells. Sorted CAR+ T cells were then cultured in Grex-24 plates for a further 2 days in T cell expansion media, with CACCR BCMA CAR+ T cells left in the absence of exogenous cytokines, and with sorted control CAR+ T cells either left in the absence of exogenous cytokines, treated with 100 U/mL human IL-2, or treated with 10 ng/mL human IL-15. On Day 15, live CAR+ T cells were enriched using the Easy Sep Dead Cell Removal Kit (StemCell Technologies), and cell pellets were snap-frozen for subsequent RNA extraction and NanoString gene expression analysis (Human CAR-T Panel; NanoString Technologies). See
(184) The data in
Example 2: Constitutive Cytokine Receptors Enhance the In Vitro Cytotoxicity of CARs Directed Towards a Liquid Tumor Target
(185) The CACCRs were cloned into CAR construct directed towards a marker for a hematological malignancy (i.e. BCMA) and the long-term cytotoxicity against the BCMA positive target cell line was evaluated.
(186) Target cells stably expressing the firefly luciferase and GFP reporters were generated by lentiviral transduction. 10,000 Luc-GFP-labelled target cells were plated in 100 uL per well in a white flat-bottomed 96-well tissue culture plate. Cryopreserved CAR-T cells (with TRAC/CD52 double knockouts) were thawed, counted, and the percentage of CAR-T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. CAR-T cells in a volume of 100 uL were then added to each well of target cells at the indicated Effector:Target (E:T) ratios in triplicates. As a Targets only negative control, 100 uL of media, instead of T cells, was added to target cells. After two or three days, wells were mixed by gentle pipetting, and 100 uL of each T cell-containing well was transferred to a new white flat-bottomed 96-well tissue culture plate containing 10,000 freshly-plated Luc-GFP-labelled target cells in 100 uL. Targets only wells received fresh media in place of T cells. The new plate was incubated at 37? C., while the number of live target cells remaining in the old 96-well plate was determined using the ONE-Glo Luciferase Assay System (Promega) according to manufacturer's instructions. The percentage of live target cells was calculated by normalizing the luciferase signal of to that of Targets only wells, and percentage cytotoxicity was calculated as 100%-% live target cells. Serial transfers to fresh target cells and luciferase readouts were performed every two or three days until all cytotoxic activity has ceased.
(187)
Example 3: CACCRs Enhance the In Vivo Activity of CAR-T Cells
(188) CAR-T cell therapies, such as those targeting CD19 and BCMA, have attained unprecedented clinical success in the treatment of hematological malignancies. While a high rate of complete responses has been achieved, this is transient as most patients eventually relapse. Furthermore, CAR-T cells have attained more limited success for the treatment of solid tumors. Among the reasons for relapse and the lack of response include insufficient CAR-T cell expansion and persistence, as well as CAR-T cell functional inhibition by immune-suppressive microenvironments. Since our in vitro characterization of CACCR CAR-T cells revealed improvements in target-driven proliferation, persistence, potency and exhaustion profiles, we next investigated whether these functional enhancements translated into improved anti-tumor activity in vivo.
(189) To interrogate the in vivo activity of CACCR CAR-T cells in the context of hematological malignancies, we utilized CAR-T cells with TRAC/CD52 dKO bearing the BCMA specific P5A2 scFv coupled to 4-1BB and CD3C signaling domains in an orthotopic xenograft model of multiple myeloma. T cell receptor (TCR)-deficient BCMA CAR-T cells were generated by Transcription Activator-Like Effector Nucleases (TALEN)-mediated knockout to avoid potential confoundance from TCR-driven xenoreactivity. 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 14 days after tumor implantation, mice were randomized based on tumor burden, and dosed intravenously with either 1?10.sup.6 or 3?10.sup.6 of the indicated CAR-T cells (n=10 per group). Tumor progression was monitored by bioluminescent imaging. On Day 30 post T cell dose, mice that had received 3?10.sup.6 CAR-T cells were bled for the enumeration of BCMA CAR-T cells in the periphery. Specifically, 50 uL of whole blood from each mouse was subjected to red blood cell lysis using ACK Lysing Buffer (Gibco), Fc-blocked and stained with the following antibody cocktail diluted in PBS+1% BSA: FITC-conjugated anti-mouse CD45 (Biolegend), BV421-conjugated anti-human CD45 (Biolegend) and an anti-idiotype antibody specific for the P5A2 scFv. Finally, samples were washed in PBS and cell pellets were resuspended in 130 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 120 uL PBS+1% BSA) prior to FACS analysis.
(190)
(191)
Example 4: Evaluate CACCRs for BCMA CAR T Cells
(192) The modular nature of CACCRs provide the flexibility of fusing signaling domains derived from different cytokine receptor of interest. Among these, IL-7, IL-2 and IL-15 have well-established roles in promoting T cell survival, expansion and effector function. We therefore hypothesized that BCMA CAR T cells may functionally benefit from CACCRs bearing the IL7Ra or IL2/15Rb signaling domains, and sought to identify which, if any, of these CACCRs could provide the most enhancement to BCMA CAR T cells.
(193) BCMA-expressing MM.1S or Molp8 target cells stably expressing the firefly luciferase and GFP reporters were generated by lentiviral transduction. 10,000 Luc-GFP-labelled target cells were plated in 100 uL per well in a white flat-bottomed 96-well tissue culture plate. Cryopreserved TRAC/CD52 dKO CAR T cells were thawed, counted, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. CAR T cells in a volume of 100 uL were then added to each well of target cells at an E:T=10:1 or 3:1 in triplicates. As a Targets only negative control, 100 uL of media, instead of T cells, was added to target cells. After two or three days, wells were mixed by gentle pipetting, and 100 uL of each T cell-containing well was transferred to a new white flat-bottomed 96-well tissue culture plate containing 10,000 freshly-plated Luc-GFP-labelled target cells in 100 uL. Targets only wells received fresh media in place of T cells. The new plate was incubated at 37? C., while the number of live target cells remaining in the old 96-well plate was determined using the ONE-Glo Luciferase Assay System (Promega) according to manufacturer's instructions. The percentage of live target cells was calculated by normalizing the luciferase signal of to that of Targets only wells, and percentage cytotoxicity was calculated as 100%-% live target cells. Serial transfers to fresh target cells and luciferase readouts were performed every two or three days until all cytotoxic activity has ceased.
(194)
(195) To evaluate the in vivo anti-tumor activity of CACCR-BCMA CARs, we utilized an orthotopic xenograft model of multiple myeloma in which disease initially establishes in the bone marrow and relapse subsequently occurs in extramedullary sites. Briefly, 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 15 days post tumor implantation, mice were randomized based on tumor burden and the indicated numbers of TRAC/CD52 dKO CACCR-BCMA CAR T cells were intravenously infused per mouse (n=10 mice per group). Thereafter, tumor burden was monitored twice weekly by bioluminescent imaging.
(196)
(197)
Example 5: Manufacturability and Functional Activity of CACCR-BCMA CAR
(198) CAR T cells are commonly generated by viral-based gene delivery, which imposes an upper limit on vector cargo size. While coexpressing additional modifications with a CAR in the same vector may enhance CAR T cell activity, increasing the cargo size may compromise transduction efficiency and product manufacturability. We next examined functional activity and CAR.sup.+ T cell yield of a number of CACCR-BCMA CARs and compare to those of their unmodified counterpart.
(199) BCMA CAR T cells were generated as follows. To make lentivirus encoding the respective BCMA CARs, HEK293T cells were plated at 0.45 million cells per mL in 2 mL of DMEM (Gibco) supplemented with 10% FBS (Hyclone) per well of a 6-well plate the day before transfection. On the day of transfection, the lentivirus was prepared by mixing together lentiviral packaging vectors 1.5 ug psPAX2, 0.5 ug pMD2G, and 0.5 ug of the appropriate transfer CAR vector in 250 uL Opti-MEM (Gibco) per well of the 6-well plate (DNA mix). 10 uL Lipofectamine 2000 (Invitrogen) in 250 uL Opti-MEM was incubated at room temperature for 5 minutes and then added to the DNA mix. The mixture was incubated at room temperature for 20 minutes and the total volume of 500 uL was slowly added to the sides of the wells containing HEK293T. 1 day post-transfection, the media from each well of HEK293T cells in the 6-well plate was replaced with 2 mL per well of T cell transduction media, i.e., X-Vivo-15 supplemented with 10% FBS. 2 days post-transfection, the lentiviral supernatants from HEK293T cells were harvested and passed through a 0.45 micron filter (EMD Millipore) to remove cell debris, and crude lentiviral supernatants were used directly for T cell transduction. On Day 0, purified T cells were activated in X-Vivo-15 medium (Lonza) supplemented with 100 IU/mL human IL-2 (Miltenyi Biotec), 10% FBS (Hyclone), and human T TransAct (Miltenyi Biotec, Cat #130-111-160, 1:100 dilution) in a Grex-24 plate (Wilson Wolf, cat #80192M). On Day 2, T cells were resuspended at 0.5 million cells per mL in T cell transduction media, transduced with an equal volume of crude lentiviral supernatant along with 100 IU/mL human IL-2 in a Grex-24 plate. On Day 5, cells were fed by replacing the spent media with T cell expansion media, i.e., X-Vivo-15 supplemented with 5% human AB serum (Gemini Bio), along with 100 IU/mL human IL-2. On Day 6, the TCRa constant (TRAC) and CD52 genes were knocked out by Transcription Activator-Like Effector Nucleases (TALEN)-mediated gene editing. See e.g., US2016/0145337. Cells were expanded into larger G-Rex vessels (Wilson Wolf) as needed using T cell expansion media and 100 IU/mL human IL-2. On Day 14, TCRa/b-cells were purified using the EasySep Human TCRa/b depletion kit (Stem Cell Technologies) and rested overnight in T cell expansion media and 100 IU/mL human IL-2 before cryopreservation on Day 15. On Days 5 and 15, CAR positivity was determined by flow cytometry using a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv.
(200)
(201) It has been reported that the wildtype WPRE may encode a truncated X-protein that may pose an oncogenic risk. To mitigate this safety risk, wildtype WPRE may be mutated (e.g. by inactivating the start codon) to abrogate X-protein expression. As the CACCR-BCMA CAR lentiviral vector initially tested contained the wildtype WPRE sequence, we sought to determine if substitution to the mutant sequence would impact the expression and functionality of CACCR-BCMA CAR.
(202) BCMA CAR T cells were generated as follows. To make lentivirus encoding the respective BCMA CARs, HEK293T cells were plated at 0.45 million cells per mL in 2 mL of DMEM (Gibco) supplemented with 10% FBS (Hyclone) per well of a 6-well plate the day before transfection. On the day of transfection, the lentivirus was prepared by mixing together lentiviral packaging vectors 1.5 ug psPAX2, 0.5 ug pMD2G, and 0.5 ug of the appropriate transfer CAR vector in 250 uL Opti-MEM (Gibco) per well of the 6-well plate (DNA mix). 10 uL Lipofectamine 2000 (Invitrogen) in 250 uL Opti-MEM was incubated at room temperature for 5 minutes and then added to the DNA mix. The mixture was incubated at room temperature for 20 minutes and the total volume of 500 uL was slowly added to the sides of the wells containing HEK293T. One day post-transfection, the media from each well of HEK293T cells in the 6-well plate was replaced with 2 mL per well of T cell transduction media, i.e., X-Vivo-15 supplemented with 10% FBS. 2 days post-transfection, the lentiviral supernatants from HEK293T cells were harvested and passed through a 0.45 micron filter (EMD Millipore) to remove cell debris, and crude lentiviral supernatants were used directly for T cell transduction. On Day 0, purified T cells were activated in X-Vivo-15 medium (Lonza) supplemented with 100 IU/mL human IL-2 (Miltenyi Biotec), 10% FBS (Hyclone), and human T TransAct (Miltenyi Biotec, Cat #130-111-160, 1:100 dilution) in a Grex-24 plate (Wilson Wolf, cat #80192M). On Day 2, T cells were resuspended at 0.5 million cells per mL in T cell transduction media, transduced with an equal volume of crude lentiviral supernatant along with 100 IU/mL human IL-2 in a Grex-24 plate. On Day 5, cells were fed by replacing the spent media with T cell expansion media, i.e., X-Vivo-15 supplemented with 5% human AB serum (Gemini Bio), along with 100 IU/mL human IL-2. On Day 6, the TCRa constant (TRAC) and CD52 genes were knocked out by Transcription Activator-Like Effector Nucleases (TALEN)-mediated gene editing. Cells were expanded into larger G-Rex vessels (Wilson Wolf) as needed using T cell expansion media and 100 IU/mL human IL-2. On Day 14, TCRa/b.sup.? cells were purified using the EasySep Human TCRa/b depletion kit (Stem Cell Technologies) and rested overnight in T cell expansion media and 100 IU/mL human IL-2 before cryopreservation on Day 15. On Days 5 and 15, CAR positivity was determined by flow cytometry using a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv.
(203) The in vitro cytotoxicity of BCMA CAR T cells were evaluated in a serial killing assay as follows. BCMA-expressing MM.1S or Molp8 target cells stably expressing the firefly luciferase and GFP reporters were generated by lentiviral transduction. 10,000 Luc-GFP-labelled target cells were plated in 100 uL per well in a white flat-bottomed 96-well tissue culture plate. Cryopreserved TRAC/CD52 dKO CAR T cells were thawed, counted, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. CAR T cells in a volume of 100 uL were then added to each well of target cells at an E:T=3:1 in triplicates. As a Targets only negative control, 100 uL of media, instead of T cells, was added to target cells. After two or three days, wells were mixed by gentle pipetting, and 100 uL of each T cell-containing well was transferred to a new white flat-bottomed 96-well tissue culture plate containing 10,000 freshly plated Luc-GFP-labelled target cells in 100 uL. Targets only wells received fresh media in place of T cells. The new plate was incubated at 37? C., while the number of live target cells remaining in the old 96-well plate was determined using the ONE-Glo Luciferase Assay System (Promega) according to manufacturer's instructions. The percentage of live target cells was calculated by normalizing the luciferase signal of to that of Targets only wells, and percentage cytotoxicity was calculated as 100%% live target cells. Serial transfers to fresh target cells and luciferase readouts were performed every two or three days until all cytotoxic activity has ceased.
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(205) Serial killing was performed using PBMC-based TRAC/CD52 dKO CAR T cells at an E:T=10:1. Enhanced serial killing activity was maintained in PBMC-derived CACCR BCMA CAR T cells. See
(206) As shown in
(207) TRAC/CD52 dKO CACCR-BCMA CAR T cells were generated and characterized as previously described.
(208) To evaluate CACCR signaling, CACCR-BCMA CAR T cells at the end of the production process were serum starved in 100 uL serum-free RPMI (Corning) for 4 hours in humidified incubator at 37? C. with 5% CO.sub.2. As a positive control, exogenous recombinant human IL-2 (10 ng/mL; Miltenyi) was added to unmodified CAR T cells during the last 30 minutes of the 4-hour serum starvation. After 4 hours, an antibody cocktail comprising BUV395-conjugated anti-human CD3 (Biolegend) and FITC-conjugated v5 tag monoclonal antibody (Thermo Fisher) were added to the cells and allowed to incubate for the final 20 minutes. Cells were then fixed by adding 35 uL of 16% paraformaldehyde to each 100 uL sample and allowed to incubate for 15 minutes at 37? C. Cells were then washed three times with PBS, and permeabilized in 100% cold methanol for 1 or 2 nights at ?20? C. On the day of FACS analysis, cells were washed three times with PBS, Fc-blocked, and stained with AlexaFluor647-conjugated anti-mouse/human Stat5 (pY694) (BD Biosciences) diluted in PBS+1% BSA. After a one hour incubation at room temperature in the dark, cells were washed three times before FACS analysis.
(209) Serial killing assays were performed at the indicated E:T ratios as previously described.
(210) In some cases, in vivo anti-tumor activity was assessed using an orthotopic model of multiple myeloma. 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 14 days after tumor implantation, mice were randomized based on tumor burden, and dosed intravenously with 3?10.sup.6 of the indicated CAR T cells (n=10 per group). Tumor progression was monitored by bioluminescent imaging.
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(214) Taken together, the original vector format of EF1a-TpoR(478-582; H499L, S505N, W515K). IL2Rb(339-379, 393-433, 528-551)-BCMA CAR.WPRE remained the most functionally active while retaining comparable manufacturability to its unmodified BCMA CAR counterpart. Since the use of wildtype or mutant WPRE did not impact CACCR-BCMA CARactivity (
Example 6: Functional Characterization of Potency and Persistence of CACCR-BCMA CARs
(215) To elucidate the mechanisms by which CACCR-BCMA CARs improve CAR T cell activity, we characterized the function and phenotype of CACCR-BCMA CART cells following repeated target exposure in vitro.
(216) TRAC/CD52 dKO CAR T cells were generated as previously described. On Day 0 of the assay, cryopreserved TRAC/CD52 dKO CAR T cells were thawed, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. 3?10.sup.5 CAR+ T cells and 1?10.sup.5 MM.1S-Luc-GFP-target cells were plated at an E:T of 3:1 in a total volume of 750 uL per well in a 48-well tissue culture plate. Duplicate wells were set up for each condition. As a comparator, 10 ng/mL recombinant human IL-15 (Miltenyi) was added to cocultures of unmodified CAR T cells and target cells. Every 2 or 3 days thereafter, wells were mixed thoroughly by gentle pipetting, and 200 uL from each well was removed be to either discarded or used for flow cytometric analysis as outlined below. Wells were then replenished with 2?10.sup.5 fresh MM.1S-Luc-GFP-target cells in a volume of 200 uL. In IL-15-treated wells, 10 ng/mL recombinant human IL-15 was replenished twice weekly.
(217) To assess CAR T cell expansion and memory T cell differentiation, 200 uL was removed from each well of the 48-well plate and re-plated into a well of a 96-well U-bottom plate. Cells were washed with PBS and stained with the Zombie-NIR Fixable Viability kit (Biolegend). Cells were then washed with PBS, Fc-blocked, and stained with a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv, BV605-conjugated anti-human CD4 (Biolegend), BV510-conjugated anti-human CD8 (Biolegend), PE/Cy7-conjugated anti-human CD62L (Biolegend) and BV785-conjugated anti-human CD45RO diluted in PBS+1% BSA. After washing, cells were resuspended 100 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 90 uL PBS+1% BSA) prior to flow cytometric analysis.
(218) To evaluate activation-induced cell death (AICD), 200 uL was removed from each well of the 48-well plate and re-plated into two wells of a 96-well U-bottom plate at 100 uL per well. 1?10.sup.5 MM.1S-Luc-GFP-target cells in a volume of 100 uL was added to one of these wells in the 96-well U-bottom plate, while the other well was left unstimulated as a baseline comparison. After 4 hours, the percentages of dead CAR T cells were determined by flow cytometry. Briefly, cells were washed with PBS and stained with the Zombie-NIR Fixable Viability kit (Biolegend). Cells were then washed with PBS, Fc-blocked, and stained with a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv, BV605-conjugated anti-human CD4 (Biolegend) and BV510-conjugated anti-human CD8 (Biolegend) diluted in PBS+1% BSA.
(219) For intracellular cytokine staining, 200 uL was removed from each well of the 48-well plate and 100 uL was re-plated into a well of a 96-well U-bottom plate. 1?10.sup.5 MM.1S-Luc-GFP-target cells in a volume of 100 uL was added to one of these wells in the 96-well U-bottom plate, along with a Protein Transport Inhibitor Cocktail (Invitrogen). After 4 hours, cells were stained for surface markers and intracellular cytokines. Briefly, cells were washed with PBS and stained with the Zombie-NIR Fixable Viability kit (Biolegend). Cells were then washed with PBS, Fc-blocked, and stained with a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv, BV605-conjugated anti-human CD4 (Biolegend) and BV510-conjugated anti-human CD8 (Biolegend) diluted in PBS+1% BSA. After washing, cells were fixed and permeabilized using the BD Cytofix/Cytoperm kit (BD Biosciences) according to manufacturer's instructions and stained with a PE/Cy7-conjugated anti-human IFNg (Biolegend), BV785-conjugated anti-human TNFa (Biolegend) and PE/Dazzle594-conjugated anti-human IL-2 (Biolegend) prior to flow cytometric analysis.
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(224) To monitor the in vivo pharmacokinetics of CACCR-BCMA CART cells, we tracked CAR T cell expansion and persistence in an orthotopic model of multiple myeloma using the Molp8-Luc-GFP cell line. The Molp8-Luc-GFP cell line expresses lower levels of BCMA than MM.1S-Luc-GFP and represents a model of multiple myeloma that is highly treatment-resistant. Briefly, 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 2?10.sup.6 Molp8-Luc-GFP. 8 days post tumor implantation, mice were randomized based on tumor burden and either 1?10.sup.6 or 5?10.sup.6 TRAC/CD52 dKO BCMA CAR T cells were intravenously infused per mouse (n=10 mice per group). Thereafter, tumor burden was monitored twice weekly by bioluminescent imaging, and mice that had received 5?10.sup.6 CAR T cells were bled at the indicated timepoints for the enumeration of BCMA CAR T cells in the periphery. Specifically, 50 uL of whole blood from each mouse was subjected to red blood cell lysis using ACK Lysing Buffer (Gibco), Fc-blocked and stained with the following antibody cocktail diluted in PBS+1% BSA: FITC-conjugated anti-mouse CD45 (Biolegend), BV421-conjugated anti-human CD45 (Biolegend) and PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv. Finally, samples were washed in PBS and cell pellets were resuspended in 250 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 240 uL PBS+1% BSA) prior to flow cytometric analysis.
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Example 7: The Activity of CACCR-BCMA CART Cells is Target-Dependent
(228) For CACCR-BCMA CAR T cells to be efficacious and safe, we next investigated whether their activity is governed by CAR-mediated target recognition, and that CACCR signaling in the absence of CAR engagement is insufficient to induce cytotoxic responses.
(229) To evaluate whether the cytotoxicity and effector responses of CACCR-BCMA CAR T cells, an overnight cytotoxicity assay was performed using either REH-Luc-GFP stably overexpressing BCMA (REH-BCMA) or the parental BCMA-negative REH-Luc-GFP as target cells. TRAC/CD52 dKO CAR T cells were generated as previously described. Cryopreserved TRAC/CD52 dKO CAR T cells were thawed, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. 10,000 target cells in a volume of 100 uL were added to each well of a white flat-bottomed 96-well tissue culture plate. CAR T cells in a volume of 100 uL were then added to each well of target cells at the indicated E:T ratios in triplicates. As a Targets only negative control, 100 uL of media, instead of T cells, was added to target cells. 24 hours later, the number of live target cells remaining was determined using the ONE-Glo Luciferase Assay System (Promega) according to manufacturer's instructions. The percentage of live target cells was calculated by normalizing the luciferase signal of to that of Targets only wells, and percentage cytotoxicity was calculated as 100%-% live target cells.
(230) To evaluate cytokine secretion profiles of CACCR-BCMA CART cells, 2.5?10.sup.5 REH-BCMA or parental REH cells in a volume of 250 uL were plated in each well of a 24-well plate. Cryopreserved TRAC/CD52 dKO CAR T cells were thawed, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. CAR T cells in a volume of 250 uL were then added to each well of target cells at and E:T=1:1 in duplicates. To assess whether CACCR-BCMA CAR T cells secreted elevated basal levels of cytokines, CAR T cells were cultured alone, and 250 uL media was added in place of target cells. 24 hours later, plates were spun down and 200 uL of supernatant from each well was harvested and stored at ?80? C. for Luminex analysis. On the day of Luminex analysis, frozen culture supernatants were thawed and diluted either 4-fold or 16-fold prior to analysis using the MILLIPLEX MAP Human High Sensitivity T Cell Panel Premixed 21-plexImmunology Multiplex Assay according to manufacturer's instructions.
(231)
(232) To assess whether CACCR signaling alone is sufficient to drive the overt expansion of CACCR-BCMA CAR T cells, we performed a growth factor independent assay, where CACCR-BCMA CAR T cells were cultured in the absence of targets or exogenous cytokines. TRAC/CD52 dKO CAR T cells were generated as previously described. Cryopreserved TRAC/CD52 dKO CAR T cells were thawed, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. 2.5?10.sup.5 CAR T cells/mL were plated at a volume of 1.5-2 mL in 24-well tissue culture plates in duplicates. As a positive control, unmodified BCMA CAR T cells were cultured in the presence of 10 ng/mL recombinant human IL-15 that was replenished weekly. At the indicated timepoints, wells were mixed thoroughly by pipetting, and 100 uL was harvested from each well for CAR T cell enumeration by flow cytometric analysis. Briefly, cells were washed with PBS and stained with the Zombie-NIR Fixable Viability kit (Biolegend). Cells were then washed with PBS, Fc-blocked, and stained with a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv, BV605-conjugated anti-human CD4 (Biolegend) and BV510-conjugated anti-human CD8 (Biolegend), diluted in PBS+1% BSA. After washing, cells were resuspended 100 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 90 uL PBS+1% BSA) prior to flow cytometric analysis. On Day 70 of the assay, each well was diluted 2-fold by the addition of media, and CAR T cell counts for subsequent timepoints were normalized accordingly by multiplying 2-fold.
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(234) Briefly, TRAC/CD52 dKO CAR T cells were suspended in assay medium (X-VIVO15 medium (Lonza) containing 10% FBS (Hyclone)) to a final concentration of 1?10.sup.6 cells/ml on Day 0.500 ?l (5?10.sup.5 cells) of each sample was plated in quadruplicate wells in a 24-well tissue culture plate. 1 ml of assay medium was added to each well to bring the final volume to 1.5 ml. 1.5 ml of PBS were added to the outer wells of the 24-well plate to prevent media evaporation. Twice per week, cells in each well were mixed and 750 ?l from each well was transferred to a new 24-well plate containing 750 ?l of fresh assay medium. As a positive control, 1 ml of irradiated MM.1S cells suspended at a final concentration of 5?10.sup.5 cells/ml was added in place of assay medium, along with the addition of IL-2 at a final concentration of 50 IU/ml. Twice per week, cells in each positive control well were mixed and 750 ?l from each well was transferred to a new 24-well plate containing 750 ?l of fresh assay medium, along with the addition IL-2 at a final concentration of 50 IU/ml. The volume remaining in each well was used to measure Total Viable Cells (TVC) using the NC-200 analyzer. The assay continued until all cell counts in each test sample read zero on the NC-200 instrument. The viable cell fold expansion was calculated by dividing the TVC of a specific time point by the TVC of Day 0. For each time point after day 0, the TVC value was normalized by a multiple of 2 to account for the sample dilution occurring twice per week.
(235) For the Ki-67 analysis assessing cells in active cell cycle, on days 0, 3, 7 and 14, cells were harvested and washed with 2 mL of BSA-containing stain buffer (BD Biosciences). Cells were suspended in 100 ?L of stain buffer containing pre-titrated amounts of each of the primary antibody. For CAR detection, 5 ?L of FITC-conjugated soluble BCMA protein was added. Cells were stained for 30 min at 4? C. and washed twice with 2 mL of PBS. After the last wash, the supernatant was aspirated and the cell pellet was loosened up using a vortex. Two milliliters of cold 70% ethanol were added dropwise to the cell pellet while vortexing and then the mixture was vortexed for an additional 30 seconds. Cells in 70% ethanol were incubated at ?20? C. for 1 hour and then washed three times with BioLegend Cell Staining buffer. Cells were suspended in 100 ?L of BioLegend Cell Staining buffer and a pre-titrated amount of human anti-Ki-67 antibody was added. Cells were stained in the dark for 30 min at room temperature and then washed twice with BioLegend Cell Staining buffer. Finally, the cell pellet was suspended in BioLegend Cell Staining buffer for flow cytometry analysis.
(236) The data show that CACCR BCMA CAR T cells do not display target- and IL-2-independent growth in vitro.
(237) The data confirmed that CACCR did not sustain indefinite survival of CACCR-BCMA CAR T cells growth in the absence of IL2 or target, either in T cell-based or PBMC-based CAR T cells derived from multiple donors.
(238) The growth factor-independent assay presented is but one way for assessing aberrant growth, as the CAR T cells have never seen target and are therefore quiescent. We additionally sought to evaluate whether the expansion and persistence of CACCR-BCMA CART cells remained finite in recently activated CACCR-BCMA CAR T cells once targets had been cleared. To this end, CACCR-BCMA CAR T cells were first exposed repeatedly to BCMA-expressing target cells to drive their full activation and expansion, before target cells were withdrawn from these cultures. Briefly, TRAC/CD52 dKO CAR T cells were generated as previously described. On Day 0 of the assay, cryopreserved TRAC/CD52 dKO CAR T cells were thawed, and the percentage of CAR T cells across all samples were normalized to the sample with the lowest transduction efficiency by the addition of non-transduced (NTD) T cells. 3?10.sup.5 CAR+ T cells and 1?10.sup.5 MM.1S-Luc-GFP-target cells were plated at an E:T of 3:1 in a total volume of 750 uL per well in a 48-well tissue culture plate. As a comparator, 10 ng/mL recombinant human IL-15 (Miltenyi) was added to cocultures of unmodified CAR T cells and target cells. Every 2 or 3 days for the first 7 days, wells were mixed thoroughly by gentle pipetting, and 200 uL from each well was discarded. Wells were then replenished with 2?10.sup.5 fresh MM.1S-Luc-GFP-target cells in a volume of 200 uL. On Day 9, target cells were either continued to be added every 2 or 3 days for the remainder of the assay, or withdrawn completely. In IL-15-treated wells, 10 ng/mL recombinant human IL-15 was replenished twice weekly. Duplicate wells were set up for each condition. At the indicated timepoints, wells were mixed thoroughly by pipetting, and 50-200 uL was harvested from each well for CAR T cell enumeration by flow cytometric analysis. Briefly, cells were washed with PBS and stained with the Zombie-NIR Fixable Viability kit (Biolegend). Cells were then washed with PBS, Fc-blocked, and stained with a PE-conjugated anti-idiotype antibody for the detection of the P5A2 scFv, BV605-conjugated anti-human CD4 (Biolegend) and BV510-conjugated anti-human CD8 (Biolegend), diluted in PBS+1% BSA. After washing, cells were resuspended 100 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 90 uL PBS+1% BSA) prior to flow cytometric analysis.
(239)
(240) Long-term persistence of CACCR BCMA CAR T cells in the absence of target was next evaluated in vivo in non-tumor-bearing mice. To facilitate long-term in vivo tracking via bioluminescent imaging, CAR T cells labelled with the Click Beetle Red (CBR) luciferase reporter were generated. Briefly, lentivirus encoding the BCMA CARs and BFP-CBR were generated as described above. TRAC/CD52 dKO human CAR T cells were generated and cryopreserved as described above, with the exception that on Day 2, T cells resuspended at 0.5 million cells per mL were co-transduced with equal volumes of CAR and BFP-CBR crude lentiviral supernatants. The percentage of CAR- and CBR-transduced cells was determined by flow cytometry using a PE-conjugated anti-idiotype antibody specific for the BCMA scFv and the BFP fluorescent reporter, respectively. On the day of T cell dosing, cryopreserved CAR T cells were thawed and normalized to the sample with the lower transduction efficiency by the addition of non-transduced (NTD) T cells. 7?10.sup.6 TRAC/CD52 CAR.sup.+ T cells were intravenously infused into non-tumor-bearing 8-10 weeks old female NSG mice. Starting on the day of T cell dosing and 1-3 times per week thereafter, in vivo T cell pharmacokinetics was determined by bioluminescent imaging. At the indicated timepoints, mice were bled for the enumeration of BCMA CAR T cells in the periphery. Specifically, 50 uL of whole blood from each mouse was subjected to red blood cell lysis using ACK Lysing Buffer (Gibco), Fc-blocked and stained with the following antibody cocktail diluted in PBS+1% BSA: FITC-conjugated anti-mouse CD45 (Biolegend), AlexaFluor647-conjugated anti-human CD45 (Biolegend), PE-conjugated anti-idiotype antibody specific for the BCMA scFv and BUV395-conjugated anti-human CD3 (used as a surrogate for human T cell receptor; BD Biosciences). Finally, samples were washed in PBS and cell pellets were resuspended in 250 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 240 uL PBS+1% BSA) prior to flow cytometric analysis.
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(242) CAR T cells that have recently undergone robust target-induced activation may have a higher threshold for their return to quiescence. To determine if the activity of CACCR BCMA CAR T cells could be reined in once target cells were cleared, the expansion and long-term persistence of CBR-labeled TRAC/CD52 dKO CAR T cells in mice bearing subcutaneous tumors was evaluated by bioluminescent imaging.
(243) CBR-labeled TRAC/CD52 dKO CAR T cells were generated by two-vector co-transduction as described above, with the exception that CAR+CBR+ double-transduced T cells were FACS-sorted based on staining with a PE-conjugated anti-idiotype antibody specific for the BCMA scFv, as well as the BFP reporter. In parallel, unlabeled TRAC/CD52 dKO CAR T cells were generated. 8-10 weeks old female NSG mice were subcutaneously implanted with 3?10.sup.6 unlabeled Molp8 cells. 17 days post tumor-implantation, mice were randomized based on tumor burden and a total of 10?10.sup.6 (9.5?10.sup.6 unlabeled spiked with 0.5?10.sup.6 CBR-labeled) TRAC/CD52 dKO CAR T cells were intravenously infused per mouse (n=7 or 8 mice per group). Starting 1 day after T cell dosing and 1 or 2 times per week thereafter, in vivo T cell pharmacokinetics was determined by bioluminescent imaging, and subcutaneous tumor burden was determined by caliper measurements. Tumor burden was calculated using the formula Tumor volume=(width{circumflex over ()}2?length/2).
(244) The data in
Example 8 Inhibition of the CACCR-BCMA CAR T Cells
(245) To minimize any potential safety concerns in clinical development, the BCMA CAR construct was designed to incorporate two rituximab mimotopes, which would sensitize the BCMA CAR T cells to rituximab-mediated depletion. We next tested the effects of rituximab on the BCMA CAR T cells with or without the CACCR. The results demonstrate that exposure of both types of BCMA CAR T cells to rituximab significantly decreased viable CAR T cells in a dose-responsive manner, as shown either in a complement-dependent cytotoxicity assay (
(246) Next, we tested the effect of rituximab on decreasing BCMA CAR T cells, with or without the CACCR, in vivo. Briefly, 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 14 days post tumor implantation, mice were randomized based on tumor burden and 3?10.sup.6 TRAC/CD52 dKO CAR T cells were intravenously infused per mouse (n=10 mice per group). Rituximab (10 mg/kg) or PBS vehicle control was dosed intraperitoneally starting on the day of CAR T cell dosing and then daily for 4 additional days (n=9 or 10 per group). Tumor burden was monitored twice weekly by bioluminescent imaging. 7 days after CAR T cell dosing, mice were bled for the enumeration of BCMA CAR T cells in the periphery. Specifically, 50 uL of whole blood from each mouse was subjected to red blood cell lysis using ACK Lysing Buffer (Gibco), Fc-blocked and stained with the following antibody cocktail diluted in PBS+1% BSA: FITC-conjugated anti-mouse CD45 (Biolegend), BV421-conjugated anti-human CD45 (Biolegend) and PE-conjugated anti-idiotype antibody specific for the P5A2 scFv. Finally, samples were washed in PBS and cell pellets were resuspended in 250 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 240 uL PBS+1% BSA) prior to flow cytometric analysis.
(247)
(248) The data in
Example 9 Long-Term In Vivo Pharmacokinetics of CACCR BCMA CAR T Cells
(249) The long-term in vivo pharmacokinetics of CACCR BCMA CAR T cells was additionally evaluated in an orthotopic model of multiple myeloma. 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 15 days post tumor implantation, mice were randomized based on tumor burden and a suboptimal dose of 3?10.sup.6 TRAC/CD52 dKO CACCR-BCMA CAR T cells were intravenously infused per mouse (n=10 mice per group). Thereafter, tumor burden was monitored twice weekly by bioluminescent imaging. At the indicated timepoints starting from Day 30, mice were bled for the enumeration of CACCR BCMA CAR T cells in the periphery. Specifically, 50 uL of whole blood from each mouse was subjected to red blood cell lysis using ACK Lysing Buffer (Gibco), Fc-blocked and stained with the following antibody cocktail diluted in PBS+1% BSA: FITC-conjugated anti-mouse CD45 (Biolegend), BV421-conjugated anti-human CD45 (Biolegend) and PE-conjugated anti-idiotype antibody specific for the BCMA scFv. Finally, samples were washed in PBS and cell pellets were resuspended in 250 uL PBS+1% BSA containing 123 count eBeads counting beads (Thermo Fisher) (10 uL counting beads in 240 uL PBS+1% BSA) prior to flow cytometric analysis.
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Example 10 the Effect of CACCR on BCMA CAR T Cell in an Orthotopic Model of Multiple Myeloma
(251) The effect of CACCR on BCMA CAR T cell in vivo activity and pharmacokinetics was next evaluated in an orthotopic model of multiple myeloma, in which disease initially establishes in the bone marrow and relapse subsequently occurs in extramedullary sites. 8-10 weeks old female NSG mice were irradiated with 1 Gy one day prior to intravenous inoculation of 5?10.sup.6 MM.1S-Luc-GFP. 15 days post tumor implantation, mice were randomized based on tumor burden and the indicated numbers of TRAC/CD52 dKO CACCR-BCMA CAR T cells were intravenously infused per mouse (n=10 mice per group). Thereafter, tumor burden was monitored twice weekly by bioluminescent imaging. At the indicated timepoints, mice were bled for the enumeration of CACCR BCMA CAR T cells in the periphery.
(252)