LUCIFERIN DERIVATIVES AND A METHOD FOR SYNTHESIS THEREOF
20220372008 · 2022-11-24
Inventors
Cpc classification
C07D277/64
CHEMISTRY; METALLURGY
International classification
Abstract
The present disclosure relates to luciferin derivatives and method for synthesis of the luciferin derivatives. The method for synthesis of the luciferin derivatives comprises performing a first reaction by using toxic phenolic derivatives as a substrate and reacts it in buffer solutions by using thermostable dehalogenase, a group of radical scavenging enzyme, a group of polyphenol oxidase, and an FADH.sub.2 generating system to obtain benzoquinone. The FADH.sub.2 generating system is able to produce FADH.sub.2 which is a substrate for the thermostable dehalogenase. Further, performing a second reaction between benzoquinone, as derived, and D-cysteine in order to obtain the luciferin derivatives having an ability to emit light at wavelengths of 600-700 nm. Therefore, the luciferin derivatives can be used in various fields such as medical research, pharmaceutical research, and other detection technologies.
Claims
1-18 (canceled)
19. A luciferin derivative consisting of the following structure: ##STR00002## wherein the luciferin derivative comprises one of R.sub.1, R.sub.2, and R.sub.3 or a combination of R.sub.1, R.sub.2, or R.sub.3, substituted by a halogen group, a nitro group, an amino group, a methyl group, an ethyl group, or a methoxy group.
20. The luciferin derivative according to claim 19, wherein the halogen group is selected from one of fluorine, chlorine, bromine and iodine.
21. The luciferin derivative according to claim 19, wherein the R.sub.1 and R.sub.2 are substituted by a methyl.
22. The luciferin derivative according to claim 19, wherein the R.sub.2 and R.sub.3 are substituted by an iodine or a bromine.
23. The luciferin derivative of claim 19, wherein the R.sub.2 is substituted by a methyl.
24. The luciferin derivative according to claim 19, wherein the luciferin derivatives have emission wavelengths of 600-700 nm.
25. A method for synthesis of a luciferin derivative of claim 19 comprising: obtaining benzoquinone by performing a first reaction in a buffer solution using substrates of phenol derivatives, thermostable dehalogenases, a group of radical scavenging enzymes, a group of polyphenol oxidases, and an FADH.sub.2 generating system; and performing a second reaction between the benzoquinone and D-cysteine for obtaining the luciferin derivative.
26. The method according to claim 25, wherein the thermostable dehalogenase is HadA G513T.
27. The method according to any one of claim 25, wherein the thermostable dehalogenase has an amino acid sequence corresponding to at least 50% of SEQ ID NO.1.
28. The method according to claim 25, wherein the group of radical scavenging enzymes is selected from one of catalase, and superoxide dismutase.
29. The method according to claim 25, wherein the group of polyphenol oxidases is selected from one of tyrosinase, laccase, and peroxidase.
30. The method according to claim 25, wherein the substrates of phenol derivatives are any one or any combination of 3-iodo-4-nitrophenol, 3-fluoro-4-nitrophenol, 3-bromo-4-nitrophenol, 2-amino-4-nitrophenol, 2,5-difluoro-4-nitrophenol, 2,5-dibromo-4-nitrophenol, 3-nitro-4-chlorophenol, 2-methoxy-4-chlorophenol, 3-methyl-4-nitrophenol, 2-methyl-4-nitrophenol and 2,3-dimethly-4-nitrophenol.
31. The method according to claim 25, wherein the FADH2 generating system is selected from one of a first FADH.sub.2 generating system comprising FADH.sub.2 for a direct reaction; a second FADH.sub.2 generating system comprising NADH, FAD and a group of flavin reductases, wherein the NADH is a reducing agent and a substrate of a group of flavin reductases for producing FADH.sub.2 from the FAD; A third FADH.sub.2 generating system comprising G-6-PD, glucose-6-phosphate, NAD.sup.+, a group of flavin reductases, and FAD, wherein the glucose-6-phosphate and NAD.sup.+ are substrates of G-6-PD for producing NADH, which is a reducing agent and a substrate of a group of flavin reductases, for subsequently producing FADH2; A fourth FADH.sub.2 generating system comprising GDH, glucose, NAD.sup.+, a group of flavin reductases, and FAD, wherein the glucose and the NAD are substrates of the GDH for producing NADH, and further the NADH, which is a reducing agent and a substrate of a group of flavin reductases, converts the FAD to FADH.sub.2; and A fifth FADH.sub.2 generating system comprising FDH, formic acid/or formate, NAD.sup.+, a group of flavin reductases, and FAD, wherein the formic acid and the NAD are substrates of FDH for producing NADH, and then the NADH, which is a reducing agent and a substrate of a group of flavin reductases, converts the FAD to FADH.sub.2.
32. The method according to claim 31, wherein the group of flavin reductase is selected from at least C1 and HadX.
33. The method according to claim 25, wherein the reacting step is performed under pH of 7.0-9.0 and at a temperature range of 20-50 degrees Celsius.
34. The method according to claim 25 further comprising purifying the luciferin derivatives.
Description
BRIEF DESCRIPTION OF DRAWINGS
[0011]
[0012]
[0013]
[0014]
[0015]
[0016]
[0017]
[0018]
DETAILED DESCRIPTION
[0019] As described hereinafter, the present disclosure is described according to representative or preferred embodiments of the present invention and by referring to the accompanying description and drawings. However, it is to be understood the description and the drawings corresponding to such embodiments are for purpose of clarity and to aid understanding, and it is envisioned that a person having ordinary skill in the relevant art may devise various modifications without departing from the scope of the invention as defined by the appended claims.
[0020] As used herein, the terms “phenolic substance” or “phenolic family substance” or “phenolic derivative” is able to use interchangeably and broadly refers to halogenated phenols, nitro phenols, and phenols having one or more substituted groups, such as halogen groups (for example, fluorine, chlorine, bromine and iodine), nitro group, amino group, methyl group, ethyl group, and methoxy group at one or more of positions of ortho or 2, meta or 3, para or 4 (for example, p-chlorophenols (4-chlorophenols), p-bromophenols (4-bromophenols), p-iodophenols (4-iodophenols), p-fluorophenols (4-fluorophenols), p-nitrophenols (4-nitrophenols), m-fluoro-p-nitrophenol (3-fluoro-4-nitrophenol), o-amino-p-nitrophenol (2-amino-4-nitrophenol), and 2,5-difluoro-4-nitrophenol, as shown in
[0021] The term “luciferin derivatives” used herein throughout the disclosure broadly refers to luciferin and/or luciferin derivatives and/or luciferin substances having substituted groups, such as one or more of halogen groups (for example, fluorine, chlorine, bromine and iodine), nitro group, amino group, methyl group, ethyl group, and methoxy group at a carbon positions 4′, 5′, 7′ of luciferin.
[0022] The term “FADH.sub.2 generating system” used herein throughout the detail description refers to a system which capable of generating or producing FADH.sub.2, either the system comprises FADH.sub.2 for direct reaction, or the system comprises other reactions which can generate or produce FADH.sub.2. For examples, the system comprises NADH, FAD and a group of flavin reductase for producing FADH.sub.2; the system comprises G-6-PD, glucose-6-phosphate, NAD.sup.+, a group of flavin reductase and FAD for subsequently producing FADH.sub.2; the system comprises GDH, glucose, NAD.sup.+, a group of flavin reductase and FAD for producing FADH2; the system comprises FDH, formic acid or formate , NAD.sup.+, a group of flavin reductase and FAD for producing FADH.sub.2.
[0023] The term “thermostable dehalogenase” used herein refers to the dehalogenase or HadA, which is reengineered or modified, particularly modified on the surface of a wild-type dehalogenase or HadA. The reengineered or modified dehalogenase or HadA, which is called a thermostable HadA or HadA G513T, has an improvement on a temperature stability. The catalytic efficiency of the thermostable HadA or HadA G513T is in a broader range of temperature from 25-50° C. Further, the wild-type dehalogenase or HadA is a dechlorinating monooxygenase that can catalyze the elimination of nitro- and halides (F, Cl, Br, I) group from nitro- and halogenated phenols substrate. The wild type HadA can catalyze the reaction at 25° C. for 24 h. Whereas the reaction at higher temperature (>30° C.), the half-life of wild type HadA is dramatically decrease for 20 min. In accordance with various embodiments, the present disclosure relates to luciferin derivatives and a method for synthesis of the luciferin derivatives.
LUCIFERIN DERIVATIVES
[0024] Luciferin derivatives consist of the following structure:
##STR00001##
wherein one or a combination of R.sub.1, R.sub.2, and R.sub.3, is substituted by halogen group, nitro group, amino group, methyl group, ethyl group, and methoxy group. (as shown in
[0025] In one aspect of the luciferin derivatives, the halogen group of the luciferin derivatives is selected from one of fluorine, chlorine, bromine and iodine. Further, the luciferin derivatives have emission wavelengths of 600-700 nm.
[0026] In an aspect of the luciferin derivatives, the position Ri or R2 or R3 may be substituted by halogen group (for example, fluorine, chlorine, bromine and iodine), nitro group, amino group, methyl group, ethyl group, and methoxy group.
[0027] In another aspect of luciferin derivatives, the position R.sub.1 and R.sub.2, or the position R.sub.1 and R.sub.3, or the position R.sub.2 and R.sub.3 may be substituted by halogen group (for example, fluorine, chlorine, bromine and iodine), nitro group, amino group, methyl group, ethyl group, and methoxy group.
[0028] In further aspect of luciferin derivatives, all three positions R.sub.1, R.sub.2, and R.sub.3 may be substituted by halogen group (for example, fluorine, chlorine, bromine and iodine), nitro group, amino group, methyl group, ethyl group, and methoxy group.
[0029]
A METHOD FOR SYNTHESIS OF LUCIFERIN DERIVATIVES
[0030] A method for synthesis luciferin derivatives comprises the steps of performing a first reaction between a substrate of phenol derivatives in a buffer solution by using a thermostable dehalogenase, a group of radical scavenging enzymes, a group of polyphenol oxidase, and an FADH.sub.2 generating system for obtaining benzoquinone, wherein the FADH.sub.2 generating system provides the FADH.sub.2 substrate for the thermostable dehalogenase; and performing a second reaction between the benzoquinone and D-cysteine for obtaining the luciferin derivatives.
[0031] The first and the second reactions may be performed under pH of 7.0-9.0 and at a temperature range of 20-50 degrees Celsius, which this condition does not require any of high acidity and/or high temperatures.
[0032] In accordance with many embodiments, there is the step of performing a first reaction between a substrate of phenol derivatives in a buffer solution using a thermostable dehalogenase, a group of radical scavenging enzymes, a group of polyphenol oxidase, and an FADH.sub.2 generating system for obtaining benzoquinone, wherein the FADH.sub.2 generating system provides the FADH.sub.2 substrate for the thermostable dehalogenase. The phenol derivatives, for example, p-chlorophenols, p-bromophenols, p-iodophenols, p-fluorophenols, p-nitrophenols, m-fluoro-p-nitrphenol, m-amino-p-nitrophenol, are suitable to be used in a range of 0.05 to 100 millimolar (mM).
[0033] The buffer solution is selected from at least one of inorganic and organic buffer solutions, wherein its usage is ranging from 1 to 1000 milliliters of volume, pH 5-9, and 20-200 mmol/l (mM) of concentration. Further, the inorganic buffer solution is selected from at least one of sodium dihydrogen phosphate solution (NaH.sub.2PO.sub.4), and potassium dihydrogen phosphate solution (KH.sub.2PO.sub.4), while the organic buffer solution is selected from at least one of HEPES solution, MOPS solution, Ammonium bicarbonate solution (NH.sub.4HCO.sub.3), and Ammonium formate solution (HCO.sub.2NH.sub.4).
[0034] The thermostable dehalogenase is a modified HadA, particularly HadA G513T (Thermostable dehalogenase; HadA G513T), containing an amino acid sequence, which is set forth in SEQ ID NO.1 as shown in
[0035] A concentration of thermostable dehalogenase or HadA or HadA G513T is in a range of 0.1. to 200 micromolar (μM). In addition, it is generally known that there could be modification, change, variation, elimination, replacement and/or addition of nucleotide sequences/or amino acid sequences, either codon optimization or other similar methods, resulting in that nucleotide sequences and/or amino acid sequences are suitable for each host cell species and/or able to increase the efficiency of the transcription and the translation in the host cell. Therefore, the amino acid sequences of the HadA G513T may be modified for these purposes. Moreover, the amino acid sequence of the thermostable dehalogenase or the HadA G13T may be identical at least 50% of SEQ ID NO.1. Additionally, it is also found that the HadA G13T according to the present disclosure may synthesize both of the luciferin and/or the luciferin derivatives.
[0036] The group of radical scavenging enzyme is for the removal of oxidants and free radicals destroying the stability of benzoquinone. It can be selected from one of catalase, and superoxide dismutase (SOD). A concentration of the group of radical scavenging enzymes is in a range of 0.001-200 micromolar (μM).
[0037] The group of the polyphenol oxidase is responsible for converting hydroquinone to benzoquinone by oxidation using metal and oxygen. The group of polyphenol oxidase is selected from one of tyrosinase, laccase, and peroxidase, wherein these enzymes are able to convert hydroquinone to benzoquinone by oxidation using iron (Fe.sup.2+), copper (Cu.sup.2+) and cofactor metals of these enzymes with oxygen respectively. Also, a concentration of the group of polyphenol oxidase is in a range of 0.001-200 micromolar (μ M).
[0038] The FADH.sub.2 generating system is selected from any one of the following systems:
[0039] a first FADH.sub.2 generating system comprising FADH.sub.2 for a direct reaction;
[0040] a second FADH.sub.2 generating system comprising NADH, FAD and a group of flavin reductase, wherein the NADH is a reducing agent and a substrate of a group of flavin reductase for producing FADH.sub.2 from the FAD;
[0041] A third FADH.sub.2 generating system comprising G-6-PD, glucose-6-phosphate, NAD.sup.+, a group of flavin reductase, and FAD, wherein the glucose-6-phosphate and NAD.sup.+ are substrates of G-6-PD for producing NADH, which is a reducing agent and a substrate of a group of flavin reductase, for subsequently producing FADH.sub.2;
[0042] A fourth FADH.sub.2 generating system comprising GDH, glucose, NAD.sup.+, a group of flavin reductase, and FAD, wherein the glucose and the NAD.sup.+ are substrates of the GDH for producing NADH, and further the NADH, which is a reducing agent and a substrate of a group of flavin reductase, converts the FAD to FADH.sub.2; and
[0043] A fifth FADH.sub.2 generating system comprising FDH, formic acid or formate , NAD.sup.+, a group of flavin reductase, and FAD, wherein the formic acid and the NAD.sup.+ are substrates of FDH for producing NADH, and then the NADH, which is a reducing agent and a substrate of a group of flavin reductase, converts the FAD to FADH.sub.2 according to the reaction of flavin reductase.
[0044] The flavin-dependent reductase is selected from at least one of C.sub.1, HadX, and their variants, wherein a concentration of the group of flavin reductase is in a range of 0.01-100 micromolar (μ M).
[0045] The present method for synthesis luciferin derivatives may use FADH.sub.2 as a substrate for the thermostable dehalogenase or HadA or HadA G513T. Therefore, there may need the
[0046] FADH.sub.2 generating or production system in various forms, such as adding FADH.sub.2 directly or adding a reactive substance to produce FADH.sub.2 as shown in
[0047] The group of nicotinamide adenine dinucleotide consists of NAD or NADH with the suitable amount between 1 micromolar (μ M) to 20 millimolar (mM).
[0048] For the flavin adenine dinucleotide (FAD), the amount used is in a range of 1 to 100 micromolar (μ M).
[0049] For the glucose, the glucose-6-phosphate and the formic acid or formate, the amount used in the reaction is between 0.05 millimolar (mM) to 2 Molar (M).
[0050] For the group of the dehydrogenase, such as glucose-6-phosphate dehydrogenase or G-6-PD, glucose, glucose-dehydrogenase (GDH) and formate-dehydrogenase (FDH), the amount used in the reaction is in the range of 0.1 to 20 unit per milliliter (U/ml).
[0051] In accordance with a number of embodiments, there is the step of performing a second reaction between the benzoquinone and D-cysteine for obtaining the luciferin derivatives. The amount of D-cysteine is in a range of 0.05 millimolar (mM) to 1 molar (M), while the concentration ratio between benzoquinone per D-cysteine is in the range from 1: 1-10.
[0052]
[0053]
[0054] The method for synthesis of luciferin derivatives also further comprises the step of purifying the luciferin derivatives. Further, means of purifying the luciferin derivatives is selected from at least one of organic solvent extraction, chromatography, filtration, and evaporation, leading to the purified luciferin derivatives having 50-95% purity.
[0055]
[0056]
PROPERTIES OF THE LUCIFERIN DERIVATIVES OF THE PRESENT DISCLOSURE
[0057] 1. Bioluminescence/Luminescence of the luciferin derivatives when reacting with the firefly luciferase
[0058] The reaction between the luciferin derivatives of the present disclosure and the firefly luciferase can emit the light. By using a spectrofluorometer under bioluminescent mode, the emission wavelength can be measured for proof of the bioluminescence property, whether the luciferin derivatives are able to be substrates for the firefly luciferase or not.
[0059] The experiment shows that the standard luciferin and the luciferin derivatives (i.e. 7′-bromoluciferin) are able to be a substrate for the firefly luciferase by emitting the wavelengths of 560 nm and 604 nm respectively.
[0060] 2. Molecular mass analysis using QTOF-mass spectrometer
[0061] By using QTOF-mass spectrometer, the molecular mass of the synthesized luciferin derivatives, 7′-iodoluciferin (C.sub.11H.sub.7IN.sub.2O.sub.3S.sub.2), 4,7′-difluoroluciferin (C.sub.11H.sub.6F.sub.2N.sub.2O.sub.3S.sub.2), and 7′-bromoluciferin (C.sub.11H.sub.7BrN.sub.2O.sub.3S.sub.2), and 4′,5′-dimethylluciferin (C.sub.13H.sub.12N.sub.2O.sub.3S.sub.2) are 406.9116, 316.9979, 358.9143, and 309.0374, respectively, which indicate the molecular mass of the expected compounds, shown in
Example 1: The synthesis of 7′-bromoluciferin from 3-bromo-4-nitrophenol
[0062] Substrates for synthesis of the luciferin derivatives 7′-bromoluciferin are: [0063] 0 2 millimolar 3-bromo-4-nitrophenol [0064] 100 millimolar HEPES buffer solution [0065] 50 micromolar thermostable dehalogenase (HadA G513T) [0066] 2.0 micromolar SOD [0067] 2.0 micromolar laccase [0068] a fifth FADH.sub.2 generating system comprises 2.0 micromolar FDH, 20 millimolar formic acid, 10.0 micromolar NAD.sup.+, flavin-dependent reductase used in example 1 is 2.0 micromolar C.sub.1, and 4.0 micromolar FAD [0069] 2 millimolar D-cysteine
[0070] All the solutions are mixed together, at pH of 8.0, 5 ml, in a container and stirred with a magnetic bar at a temperature of 35° C. The reaction occurs when the thermostable dehalogenase solution is added to the container, then allowing the reaction to complete for about 200 minutes. Then, the luciferin derivatives are purified by pushing the solution via a nitrogen gas through the membrane filter (stirred-cell) with a cut-off value of 10 kDa in combination with the extraction by organic solvents, i.e. ethyl acetate. The solution after extraction with ethyl acetate, will be analyzed for purity and purification again with HPLC by tracking the light absorbance at a wavelength of 327 nm. The solution is separated through a non-polar column (Reverse phase C18) using a mixture of water and methanol with the addition of 0.1% v/v formic acid, as elution mobile phase. The luciferin derivatives will be collected and then freeze-dried. The purified luciferin derivatives are then produced for 2 milligrams.
Example 2: The synthesis of 4′,7′-difluoroluciferin from 2,5- difluoro-4-nitrophenol
[0071] Substrates for synthesis of the luciferin derivatives 4′,7′-difluoroluciferin are: [0072] 1.0 millimolar 2,5-difluoro-4-nitrophenol [0073] 100 millimolar MOPS buffer solution [0074] 50 micromolar HadA G513T [0075] 2.0 micromolar SOD [0076] 2.0 micromolar laccase [0077] a fourth FADH.sub.2 generating system comprises 4.0 micromolar GDH, 20.0 millimolar glucose, 10.0 micromolar NAD.sup.+, 2.0 micromolar flavin-dependent reductase (HadX), 4.0 micromolar FAD, and 2.0 millimolar D-cysteine
[0078] All the solutions are mixed together, at pH of 8.0, 5 ml, in a container and stirred with a magnetic bar at a temperature of 35° C. The reaction occurs when thermostable dehalogenase solution or HadA G513T is added to the container, then allowing the reaction to complete. The luciferin derivative 4′,7′-difluoroluciferin prepared from 2,5-difluoro-4-nitrophenol will be finally obtained.
Example 3: The synthesis of 4′,5′-dimethylluciferin from 2,3- dimethyl-4-nitrophenol
[0079] Substrates for synthesis of the luciferin derivative 4′,5′-dimethylluciferin are: [0080] 0.5 millimolar 2,3-dimethyl-4-nitrophenol [0081] 100 millimolar sodium phosphate buffer solution [0082] 100 micromolar thermostable dehalogenase (HadA G513T) [0083] 5.0 micromolar SOD [0084] 2.0 micromolar tyrosinase [0085] a second FADH.sub.2 generation system comprising NADH and FAD, wherein the NADH is a reducing agent and a substrate of a group of flavin reductase for producing FADH.sub.2 from the FAD [0086] 5 millimolar D-cysteine
[0087] All of the solutions are mixed together, at pH of 7.5, 20 ml, in a container and stirred with a magnetic bar at a temperature of 35° C. The reaction occurs when thermostable dehalogenase solution or HadA G513T is added to the container, then allowing the reaction to complete. The luciferin derivative 4′,5′-dimethylluciferin prepared from 2,3-dimethyl-4-nitrophenol will be finally obtained.