PARALLEL MULTI-BEAM TIME-OF-FLIGHT MASS SPECTROMETER
20220367163 · 2022-11-17
Inventors
Cpc classification
H01J49/009
ELECTRICITY
H01J49/4225
ELECTRICITY
International classification
Abstract
A parallel multi-beam mass spectrometer includes an ion trap and a single multi-beam time-of-flight analyzer. The trap has a plurality of alternating electrodes configured to form a plurality of quadrupoles defining a surface of the trap, wherein at least two of the plurality of quadrupoles are configured as mass filters for selective ejection of concurrent parallel beams of ions from the trap in respective predetermined ion mass-to-charge windows. The single multi-beam time-of-flight analyzer has a position sensitive detector or a plurality of individual detectors for simultaneously receiving and analyzing the concurrent parallel beams of ions.
Claims
1-22. (canceled)
23. A parallel multi-beam mass spectrometer comprising: an ion trap having a plurality of electrodes configured to form a plurality of quadrupoles defining a surface of the trap, wherein at least two of the plurality of quadrupoles are configured as mass filters for selective ejection of concurrent parallel beams of ions from the trap in respective predetermined ion mass-to-charge windows; and a single multi-beam time-of-flight analyzer for simultaneously receiving and analyzing the concurrent parallel beams of ions, wherein the at least two of the plurality of quadrupoles configured as mass filters comprise a first quadrupole and a second quadrupole, the first quadrupole being defined by four electrodes driven by opposite polarity electrical signals having a first RF amplitude, and the second quadrupole being defined by four electrodes driven by opposite polarity electrical signals having a second RF amplitude, wherein the first quadrupole transmits ions with a first range of mass to charge values and the second quadrupole transmits ions with a second range of mass-to-charge values different than the first range, and wherein the first and second quadrupoles share two electrodes whereby the first and second quadrupoles spatially overlap.
24. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the two shared electrodes are segmented to permit application of two different RF signals to the same two shared electrodes.
25. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the single multi-beam time-of-flight analyzer comprises a single position sensitive detector for simultaneously detecting the concurrent parallel beams of ions.
26. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the single multi-beam time-of-flight analyzer comprises a plurality of individual detectors, each detector detecting a single beam of the concurrent parallel beams of ions.
27. The parallel multi-beam mass spectrometer as defined in claim 23, further comprising a collision cell communicating with at least one of the at least two of the plurality of quadrupoles configured as mass filters, the collision cell fragmenting the concurrent parallel beams of ions.
28. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the single multi-beam time-of-flight analyzer further comprises a time-of-flight accelerator column for pulsing the concurrent parallel beams of ions into respective time of flight paths.
29. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the single multi-beam time-of-flight analyzer further comprises a time-of-flight mirror for orthogonal reflection of the concurrent parallel beams of ions.
30. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the first and second RF amplitudes of the RF and DC components of the electrical first and second RF signals are adjusted to attract and transmit different respective mass-to-charge ranges of ions.
31. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the first and second RF signals are formed by square pulses.
32. The parallel multi-beam mass spectrometer as defined in claim 23, wherein the first and second RF signals each comprise a broadband excitation waveform designed to excite ions in all mass-to-charge ranges except those that are to be transmitted through the respective first and second quadrupoles.
33. A method for parallel multi-beam mass spectrometry comprising: grouping electrodes defining a surface of an ion trap into a plurality of quadrupoles, the plurality of quadrupoles comprising a first quadrupole and a second quadrupole; driving alternating electrodes of the first quadrupole with opposite polarity electrical signals having a first RF amplitude to form a first mass filter, the first mass filter transmitting ions with a first range of mass to charge values; driving alternating electrodes of the second quadrupole with opposite polarity electrical signals having a second RF amplitude to form a second mass filter, the second mass filter transmitting ions with a second mass to charge values; selectively ejecting concurrent parallel beams of ions from the first and second quadrupoles of the trap in predetermined ion mass-to-charge windows; transmitting the concurrent parallel beams of ions to a single multi-beam time of flight analyzer; and simultaneously detecting the concurrent parallel beams of ions with a position sensitive detector or a plurality of individual detectors, wherein the first and second quadrupoles share two electrodes whereby both the first RF signal and the second RF signal are applied to the two shared electrodes.
34. The method as defined in claim 33, further comprising fragmenting the concurrent parallel beams of ions with at least one collision cell disposed between the ion trap and the time-of-flight analyzer.
35. The method as defined in claim 33, further comprising pulsing the concurrent parallel beams of ions into respective time of flight paths with the time-of-flight analyzer.
36. The method as defined in claim 33, further comprising orthogonally reflecting the concurrent parallel beams of ions with a time-of-flight mirror of the time-of-flight analyzer.
37. The method as defined in claim 33, wherein the two shared electrodes are segmented to permit application of both the first RF signal and the second RF signal.
38. The method as defined in claim 33, wherein the first and second RF amplitudes of the RF and DC components of the electrical first and second RF signals are adjusted to attract and transmit different respective mass-to-charge ranges of ions.
39. The method as defined in claim 33, wherein the first and second RF signals are formed by square pulses.
40. The method as defined in claim 33, wherein the first and second RF signals each comprise a broadband excitation waveform designed to excite ions in all mass-to-charge ranges except those that are to be transmitted through the respective first and second quadrupoles.
Description
BRIEF DESCRIPTION OF DRAWINGS
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[0030]
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DETAILED DESCRIPTION OF EMBODIMENTS
[0032] The following sections describe embodiments of the present disclosure. It should be apparent to those skilled in the art that the described embodiments with accompanying figures provided herein are illustrative only of the invention and not limiting, having been presented by way of example only.
[0033] A multi-quadrupole ion trap (MultiQ-IT) device of the prior art is disclosed in U.S. Pat. No. 8,637,817, the specification of which is incorporated herein by reference in its entirety for all purposes. As disclosed in U.S. Pat. No. 8,637,817, and shown in
[0034] For example, an ion trap in the form of a cube of dimensions 10 cm×10 cm×10 cm, an example of which is provided in
[0035] The electrodes of the ion trap device are confined to the surfaces of the cube in
[0036] Quadrupoles are commonly known for use as ion guides and/or mass filters. Each pair of adjacent rods in a quadrupole is connected to a positive or a negative RF potential of suitable magnitude and frequency for the particular application, so that direct neighbors are maintained at opposing polarities or phases with the same amplitude. This arrangement is known to provide radial confinement of ions around a central axis of the rod set forming the quadrupole.
[0037] In ion traps, this same pattern of alternating RF signals is applied to adjacent electrodes formed on each surface of a regular polyhedral structure enclosing an ion containment region. In the case of the cube-shaped ion trap 50, for example, a total of 294 quadrupoles are formed, which surround the ion containment region 54. By appropriate application of alternating RF phases, a steep potential barrier can be formed at the surfaces of the cube with a shallow well towards the center of the device that will effectively repel positive and negative ions towards the center of the device and trap ions inside the volume 54. In this way, a very large number of ions with a wide range of masses can be trapped in the device.
[0038] The ion trap device of the prior art can also include plate electrodes 56 outside the surfaces 70 of the regular polyhedral structure of the device. To prevent ions from escaping the ion containment region along the axis of quadrupoles, where the RF field is small, a small DC potential can be applied to any number of the plate electrodes to repel the ions back towards the containment region 60. In various embodiments, a DC voltage is applied in the range of between about 0 V and about +1000 V, preferably in the range of between about +0.02 V to about +100 V to at least a portion of the plate electrodes to prevent, for example, positive ions from escaping.
[0039] Any of the plate electrodes 56 can include ports 58 to allow ions to be injected into the ion containment region 54, and/or for ejecting ions out of the ion containment region 54. To guide ions into the containment region 54, the two-dimensional array of rod-shaped electrodes on one of the surfaces of the cube can include a quadrupole ion guide 72 to guide ions into a containment volume and/or a quadrupole ion guide 74 to guide ions out of the containment volume.
[0040] By applying an RF voltage with a characteristic frequency corresponding to a particular ion mass range to the electrodes forming the surface of the ion trap cube, mass selective ion ejection can be achieved along the axes of the quadrupoles arranged on the containment surfaces. Similarly, the voltage and frequency of the RF signal applied to the rods of the quadrupole ion guides 72, 74 can be appropriately adjusted for ion guiding and/or for mass filtering for a particular mass-to-charge window. Accordingly, ions can be ejected in a mass-to-charge dependent manner through a port 58 in a plate electrode 56, for example, appropriately positioned to coincide with the region centered along the axis of the quadrupole 74.
[0041] The ion device can include a large number of quadrupoles. As shown in
[0042] Accordingly, a parallel mass spectrometer can include up to N.sup.3−(N−2).sup.3−2 individual mass analyzers, one for each mass-to-charge window of ions ejected from each quadrupole for simultaneous parallel analysis of the ions stored in the device. Highly efficient parallel mass spectrometry free of losses associated with conventional sequential ion scanning can therefore be provided by implementing the ion device disclosed in U.S. Pat. No. 8,637,817.
[0043] Referring to
[0044] The plate electrode 130 is preferably biased with a high DC voltage (e.g., about +10V) for containment of the injected ions in the containment region 126. Additional plates 132 can be biased at a small DC voltage, e.g., about +0.03V, for depletion of singly-charged ions. As discussed herein below, depletion of these singly-charged ions provides a mass spectrometer characterized by a high signal-to-noise ratio.
[0045] Mass selective ion ejection from embodiments of the ion trap device with multiple mass filtered outputs, such as the device 110, can be performed periodically or continuously along any or all of the N.sup.3−(N−2).sup.3−2 quadrupole axes. The mass selective ion ejection, or filtering, can be performed according to methods known in the art, such as by mass resonance ion ejection, or using resonance ion injection into each quadrupole axis (channel) by supplying wide band resonance excitation containing all frequencies that excite all ions in the trap except the ions characterized by a particular m/z. These ions pass through the quadrupole to be detected at the exit using multiple ion detectors, or using a large array detector, or in the case of analysis of chemical and biological assays, a “soft-landed” species device.
[0046] In one or more embodiments of the present invention, one specific method for selectively ejecting ions from an ion trap 112, as disclosed in U.S. Pat. No. 8,637,817, is schematically shown in
[0047] Specifically,
[0048] Ions that cannot make it through a given quadrupole 52a, 52b, 52c, 52d that is set to transmit a given range of m/z values ions will be repelled back into the trap 112 by the quadrupole fringing fields. These repelled ions will further explore the trap from the inside until they find the exit 115a, 115b, 115c, 115d that is specifically designed to transmit them. It has been found that ion trajectories become destabilized as they approach a given quadrupole along the quadrupole axes under conditions that prohibit their exit, providing a mechanism for ion containment within the trap 112.
[0049]
[0050]
[0051] It is also possible to use RF signals formed by square pulses (not shown), wherein the duration of the positive and negative part of the pulses can be adjusted so as to keep the duty cycle between 0.38 and 0.5, for example. When the duty cycle is set to 0.5, the quadrupole operates in the RF-only mode transmitting a wide range of ions. However, when the duty cycle is set close to 0.38 the quadrupole will transmit a narrow range of ions (˜1 Th), centered on a m/z value determined only by the amplitude of the RF signal. These features provide a convenient “digital” way to control multiple mass filters of the ion trap because the filtered value of m/z depends on the amplitude of the RF signal (at a given RF frequency), while the duty cycle sets the width of the transmission window.
[0052] Another possible mode of operation involves mixing into the major RF signal a specially designed broadband excitation waveform designed to excite all ions in the observable m/z range except those that are to be transmitted through a given quadrupole exit. This specially designed waveform can be provided by subtracting a specific frequency from a “white noise” spectrum of frequencies, wherein the specific frequency subtracted from the spectrum is characteristic for the ions to be transmitted through a given quadrupole exit.
[0053] Turning now to
[0054] The ion traps 112 shown in
[0055] It is further conceivable that more than one ion trap 112 can be connected in series to increase the signal-to-noise ratio by a factor of XN, where X is the signal-to-noise improvement of a single ion trap and N is the number of ion traps in series. In this embodiment, the ions are subjected to a 2.sup.nd 3.sup.rd, . . . N.sup.th round of ion selection and fragmentation prior to mass analysis.
[0056] Such embodiment can yield a wealth of information, including the identity of macromolecular species involved in specific biological processes, the identity and location of chemical modifications and processing events on macromolecules, the interaction of specific macromolecules, single cell proteome analysis, chemical crosslinking data that are valuable for structural modeling of macromolecular complexes, the stoichiometry of macromolecular complexes, as well as quantitative aspects of many cellular processes.
[0057] In
[0058] In
[0059] In
[0060] As described above, the voltage and frequency of the RF signal applied to the electrodes of a plurality of quadrupoles arranged on the trap 112 can be individually and appropriately adjusted so that each ion guide 74 can guide ions out of the trap 112 based on a particular mass-to-charge window. Thus, ions from an ion source (not shown) are split in real time in concurrent sub-beams 20 containing ions in ten non-overlapping m/z regions.
[0061] These beams 20 are preferably directed to respective collision cells 22, where they can be fragmented to create ten concurrent fragmentation channels 24.
[0062] The resulting fragment channels 24 from each collision cell 22 are simultaneously sent to a single time-of-flight analyzer 26, which simultaneously analyzes the fragment ions in different m/z ranges. The single time-of-flight analyzer 26 preferably includes a time-of-flight accelerator column 28, (which pulses and accelerates ions into the time of flight path), a time-of-flight mirror 30 and a position sensitive detector 32.
[0063] All ions entering the time-of-flight analyzer 26 are pulsed toward the single position sensitive detector 32, or the multiple individual detectors. Their times-of-flight are measured from the instant of the applied pulse to the instants when they reach the detector. However, ions in the multiple parallel beams (either intact or fragments) need to be discerned from each other. This can be done using a separate detector for each concurrent beam. An alternative solution, according to the present invention, uses a “single” detector 32 that can recognize the position at which the ions from each beam strike (i.e., a detector that can detect both the arrival times of the ions and their positions). In a preferred embodiment, the concurrent beams should have clearly discernable positions on this position sensitive detector.
[0064] The time-of flight-analyzer 26 can be a conventional linear TOF analyzer, or a TOF analyzer with a mirror, commonly used in modern TOF mass analyzers to increase the resolution of such analyzers. In a preferred embodiment, an orthogonal injection TOF analyzer that accepts ions in an orthogonal direction to the TOF path is used. This is the most appropriate type of TOF analyzer for the present multibeam purpose, where each beam is continuous in time.
[0065] The term “time-of-flight” is used to describe a type of analyzer that measures the time that ions take to travel through a given time-of-flight. It is straightforward and common practice to deduce the m/z (mass to charge ratio) of ions from their measured times-of-flight (usually using known calibrants). As described above, in the style of TOF analyzer shown in
[0066] Thus, the ions in the channels 24 are analyzed in parallel in a single orthogonal reflection time-of-flight mass spectrometer, which separates ions into ten ion beams at the same time and detects the separated ions either in a position sensitive detector or in 10 separate detectors.
[0067] It should be apparent to those skilled in the art that the described embodiments of the present invention provided herein are illustrative only and not limiting, having been presented by way of example only. As described herein, all features disclosed in this description may be replaced by alternative features serving the same or similar purpose, unless expressly stated otherwise. Therefore, numerous other embodiments of the modifications thereof are contemplated as falling within the scope of the present invention as defined herein and equivalents thereto.