Enaminone-grafted trithiocarbonate with anticancer and antimicrobial activity
10071960 ยท 2018-09-11
Assignee
Inventors
- Yahia Nasser Mabkhot (Riyadh, SA)
- Jamal Mohammed Ali Khaled (Riyadh, SA)
- Mujeeb Abdullah Sultan (Riyadh, SA)
- Fahd Ali Nasr Mohammed (Riyadh, SA)
- Naiyf Sultan Helial Alaloi Alharbi (Riyadh, SA)
- Salim Showiman Al-Showiman (Riyadh, SA)
- Hazem Ahmed Ghabbour (Riyadh, SA)
Cpc classification
C07C329/06
CHEMISTRY; METALLURGY
International classification
Abstract
The present subject matter is directed to an enaminone-grafted trithiocarbonate compound having the structure: ##STR00001##
and the anticancer and antimicrobial activities exhibited by the compound.
Claims
1. A compound having the formula: ##STR00004## or a pharmaceutically acceptable salt thereof.
2. A pharmaceutical composition, comprising the compound according to claim 1 and a pharmaceutically acceptable carrier.
3. A method of treating a disease, comprising: administering to a patient a therapeutically effective amount of the pharmaceutical composition according to claim 2, wherein the disease is cancer and the cancer is selected from the group consisting of liver cancer, colon cancer, and breast cancer or the disease is a fungal infection.
4. The method of claim 3, wherein the fungal infection is caused by a yeast or mold.
5. The method of claim 4, wherein the yeast or mold is Candida albicans.
6. The method of claim 4, wherein the yeast or mold is Cryptococcus neoformans.
7. The method of claim 4, where the yeast or mold is Aspergillus fumigatus.
8. The method of claim 4, where the yeast or mold is Penicillium chrysogenum.
9. The method of claim 3, wherein the disease fungal infection is caused by a bacteria.
10. The method of claim 9, wherein the bacteria is Streptococcus mutans.
11. The method of claim 9, wherein the bacteria is Salmonella typhi.
12. A method of synthesizing a compound, comprising: mixing diethyl 2,2-(thiocarbonylbis(sulfanediyl))diacetate with N,N-dimethylformamide dimethyl acetal to form a mixture; and heating the mixture to at least about 100 C. for at least about one hour to form a heated mixture including the compound having the structure: ##STR00005##
13. The method of claim 12, further comprising: allowing the heated mixture to cool to room temperature to form a cooled mixture; maintaining the cooled mixture for at least about 8-10 hours to form a maintained mixture; and isolating the compound from the maintained mixture.
14. The method of claim 13, wherein the compound is in crystal form.
15. The method of claim 12, further comprising a preliminary step of reacting ethyl cyanoacetate, carbon disulfide (CS2), and ethyl 2-chloroacetate to synthesize the diethyl 2,2-(thiocarbonylbis(sulfanediyl))diacetate.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
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(10) Similar reference characters denote corresponding features consistently throughout the attached drawings.
DETAILED DESCRIPTION
(11) An enaminone-grafted trithiocarbonate derivative can include (Z)-ethyl 3-(dimethylamino)-2-(((((Z)-1-(dimethylamino)-3-ethoxy-3-oxoprop-1-en-2-yl)thio)carbonothioyl)thio)acrylate 3, having the following structural formula:
(12) ##STR00003##
(13) In an embodiment, the enaminone-grafted trithiocarbonate derivative is an anticancer agent. In an embodiment, the enaminone-grafted trithiocarbonate derivative is an antimicrobial agent.
(14) An embodiment of the present subject matter is directed to a method of synthesizing an enaminone-grafted trithiocarbonate derivative compound comprising: mixing 2,2-(thiocarbonylbis(sulfanediyl))diacetate with N,N-dimethylformamide dimethyl acetal (DMF-DMA) to form a mixture, heating the mixture to at least about 100 C. for at least about one hour to form a heated mixture including the enaminone-grafted trithiocarbonate compound, allowing the heated mixture to cool to room temperature to form a cooled mixture, maintaining the cooled mixture for at least about 8-10 hours to form a maintained mixture; and isolating the enaminone-grafted trithiocarbonate derivative compound from the maintained mixture.
(15) In an embodiment, the isolated enaminone-grafted trithiocarbonate derivative is in crystal form.
(16) In an embodiment, the method further comprises a preliminary step of reacting ethyl cyanoacetate, carbon disulfide (CS.sub.2), and ethyl 2-chloroacetate to synthesize the diethyl 2,2-(thiocarbonylbis(sulfanediyl))diacetate.
(17) An embodiment of the present subject matter is directed to a method of treating a disease comprising administering a therapeutically effective amount of the enaminone-grafted trithiocarbonate derivative to a patient afflicted by the disease. In an embodiment, the disease comprises cancer. The cancer may be liver cancer, colon cancer, or breast cancer. In an embodiment, the disease is a fungal infection, which may be caused by a yeast or mold. In an embodiment, the disease is caused by bacteria, such as a gram positive bacteria or gram negative bacteria.
(18) As stated above, diethyl 2,2-(thiocarbonylbis(sulfanediyl))diacetate (compound 1) can be prepared according to a preliminary synthetic route involving reacting ethyl cyanoacetate, carbon disulfide (CS.sub.2), and ethyl 2-chloroacetate. Referring to the reaction scheme of
(19) The synthesized trithiocarbonate compound 3 was characterized by spectroscopic techniques of IR, .sup.1H-NMR, .sup.13C-NMR, and HRMS, and its 3D structure was further identified by X-ray single crystallography. In IR spectrum, the enaminone group, an important characteristic absorption of compound 3, appeared at 1686 and 1613 cm.sup.1. The .sup.1H-NMR and .sup.13C-NMR spectra of compound 3 showed symmetric pattern in CDCl.sub.3 and was slightly different in DMSO. The triplet signal at 1.05 ppm with coupling constants J=7 Hz is integrated for the protons assigned for methyl group (OCH.sub.2CH.sub.3) while the signal of protons assigned to methylene group (OCH.sub.2CH.sub.3) appeared as a quartet at 3.94 ppm with coupling constants J=7 Hz. The singlet signals at 3.13, 3.28, and 3.94 ppm are integrated for the protons assigned for methyl groups attached to nitrogen atom (NCH.sub.3). The signal of olefinic proton (NCHC), the characteristic signal of the product 3 when compared to its precursor 1, appeared as a singlet at 8.01 ppm. In the .sup.13C-NMR spectrum, the methyl groups appeared at 14.99 ppm, while methylene groups appeared at 60.14 ppm. The peaks which appeared at 81.85, 156.04, and 167.4 ppm are due to (SCCHN), (CCHN), and (CO), respectively. The thiocarbonyl peak (SCSS) of product 3 was downshifted more and appeared at 233.39 ppm; however, this group appeared at 220.2 ppm in the precursor 1, and the shifting may be attributed to the new incorporated enaminone.
(20) The x-ray single diffraction analysis clarified the 3D structure of compound 3. In the molecular structure of compound 3, C.sub.15H.sub.24N.sub.2O.sub.4S.sub.3, was crystallized in the Monoclinic, P2.sub.1/c, a=10.6328 (7) , b=8.8416 (5) , c=22.8271 (13) , =109.309 (5), V=2025.3 (2) .sup.3, Z=4. Details of crystallographic data and refinement information of compound 3 are summarized in Table 1, while selected bond lengths and bond angles are listed in Table 2. Further, the asymmetric unit containing one independent molecule is shown in
(21) TABLE-US-00001 TABLE 1 Experimental Data of Compound 3 Crystal data Chemical formula C.sub.15H.sub.24N.sub.2O.sub.4S.sub.3 Mr 392.54 Crystal system, space group Monoclinic, P2.sub.1/c Temperature (K) 293 a, b, c () 10.6328 (7), 8.8416 (5), 22.8271 (13) () 109.309 (5) V (3) 2025.3 (2) Z 4 Radiation type K (mm.sup.1) 3.52 Crystal size (mm) 0.45 0.41 0.37 Data collection Diffractometer Bruker APEX-II D8 venture diffractometer Absorption correction Multi-scan SADABS Bruker 2014 Tmin, Tmax 0.301, 0.356 No. of measured, independent and observed 15351, 3446, 2093 [I > 2(I)] reflections R.sub.int 0.086 Refinement R[F.sup.2 > 2(F.sup.2)], wR(F.sup.2), S 0.066, 0.198, 1.03 No. of reflections 3446 No. of parameters 224 No. of restraints 1 H-atom treatment H atoms treated by a mixture of independent and constrained refinement .sub.max, .sub.min (e .sup.3) 0.33, 0.30
(22) TABLE-US-00002 TABLE 2 Selected Geometric Parameters (, ) S1C4 1.728 (6) S1C8 1.730 (4) S2C8 1.630 (5) S3C8 1.750 (6) S3C9 1.744 (5) O1C2 1.455 (11) O1C3 1.341 (9) O2C3 1.205 (10) O3C10 1.209 (7) C4S1C8 103.4 (3) C8S3C9 105.8 (2) C2O1C3 114.9 (7) C10O4C11 117.8 (5) C5N1C6 124.7 (6) C5N1C7 120.1 (6) C6N1C7 115.1 (5) C13N2C14 124.9 (5) C13N2C15 120.1 (4) C14N2C15 114.8 (4) O1C2C1 109.6 (9) O1C3O2 122.6 (6) O1C3C4 112.4 (7) O2C3C4 125.0 (7) O4C10 1.346 (8) O4C11 1.491 (7) N1C5 1.321 (8) N1C6 1.440 (10) N1C7 1.454 (9) N2C13 1.332 (6) N2C14 1.450 (7) N2C15 1.443 (8) S1C4C3 119.6 (5) S1C4C5 125.9 (4) N1C5C4 133.6 (6) S1C8S2 127.4 (3) S1C8S3 114.7 (3) S2C8S3 117.9 (3) S3C9C10 119.3 (4) S3C9C13 126.1 (3) O3C10O4 122.3 (4) O3C10C9 125.6 (6) O4C10C9 112.1 (5) O4C11C12 107.6 (8) N2C13C9 132.7 (5)
(23) TABLE-US-00003 TABLE 3 Hydrogen-Bond Geometry (, ) DH A DH H
A D
A DH
A C7H7A
O3.sup.i 0.9600 2.5700 3.461 (9) 155.00 C13H13A
O3.sup.ii 0.9300 2.5900 3.462 (7) 156.00 Symmetry codes: (i) x + 1, y, z; (ii) x 3, y 1, z.
(24) The design and synthesis of new trithiocarbonate derivatives is appealing due to the versatile applications of trithiocarbonate derivatives. The atom-efficient transformation toward the synthesis of bulk molecules from smaller starting materials is particularly desirable in organic synthesis. Further, the incorporation of a special functional group such as an enaminone group with the conjugated system NCCCO in the molecules provides stability. The incorporation also provides new approaches for uses in organic synthesis, particularly for hetero pharmaceutical agents such as anti-inflammatory, antitumor, antioxidant, antibacterial, and antituberculosis agents. In this context, N,N-dimethylformamide dimethyl acetal (DMF-DMA) is a reagent useful in functional group transformations and in building carbon skeletons as a one-carbon synthon.
(25) In addition, antimicrobial, chemically-synthesized agents have been widely regarded as a promising solution to combat antimicrobial resistant microbes. Organic trithiocarbonates and their derivatives are considered biological toxicants having several industrial, chemical, and medicinal applications, and many scientific researchers have confirmed trithiocarbonates have noticeable biological activity against pathogenic microbes.
(26) As described in detail below, present compound 3 demonstrated biological activity against Gram positive and negative bacteria, as well as yeasts and molds. MIC, MBC and MFC indicated that Bacillus subtilis and Brevibacillus laterosporus (both Gram positive bacteria) were resistant to compound 3, as compared to other tested microorganisms (
(27) Recent reports have shown that carbonic anhydrase inhibitors have novel therapeutic applications. In particular, carbonic anhydrases catalyze a simple, fundamental reaction, namely CO.sub.2 hydration to yield bicarbonate and protons. In many organisms, an inhibition or activation of those enzymes leads to various therapeutic applications, and -, -, and -carbonic anhydrases are detected in parasites belonging to numerous kingdoms. For instance, bacteria possess carbonic anhydrases of all classes, molds and yeast possess - and -, and protozoans have only -carbonic anhydrases. Several trithiocarbonate derivatives act as microbial inhibitors, such as nickel trithiocarbonate compounds, oligomeric thiocarbonates, and an aqueous solution comprising a thiocarbonate, a sulfide, and an ammoniacal compound. Further, studies have confirmed that certain enaminone-based heterocyclic compounds have high biological activity as antimicrobial agents. In addition, various cyclic enaminone esters previously synthesized did not exhibit any significant antibacterial activity. The present inventors have discovered that compound 3, surprisingly, demonstrates significant biological activity as both an antifungal and antibacterial agent.
(28) The effect of compound 3 on cell survival was determined using three different cancer cell lines, colon cancer cell (LoVo), liver cancer cells (HepG2), and breast adenocarcinoma cells (MDA-MB-231) as model. The dose responsive curves for compound 3 against the LoVo, HepG2, and MDA-MB-231 cells are summarized in
(29) TABLE-US-00004 TABLE 4 IC.sub.50 values for compound 3 with cancer cells Cell Type IC.sub.50 (g/mL) LoVo Colon cancer cells 37.5 HepG2 Liver cancer cells 38 MDA-MB-231 Breast Cancer cells 45
(30) As confirmed by the data set forth herein, the present inventors have demonstrated that compound 3 displays cytotoxic activity against three different cancer cells. MTT and LDH assays are two tests widely used for in vitro toxicology studies. In general, in order to increase the reliability of the results obtained, more than one assay should be used to determine cell viability in vitro studies.
(31) MTT and LDH assays were used to evaluate the cytotoxic effect of compound 3 against Hepg2, LoVo, and MDA-MB-231 cell lines to determine anticancer potential. Compound 3 showed strong growth inhibition activity against all three tested human tumor cells, with IC.sub.50 concentrations ranging from 37.5 to 45 g/ml. Compound 3 also displayed cytotoxic effects against different tumor cell lines, and was more active against LoVo colon cancer cells (
(32) The enaminone-grafted trithiocarbonate derivative can be administered by any conventional route of administration, including, but not limited to, intravenous, oral, subcutaneous, intramuscular, intradermal and parenteral. Depending on the route of administration, the enaminone-grafted trithiocarbonate derivative can be constituted into any form. For example, forms suitable for oral administration include solid forms, such as pills, gelcaps, tablets, caplets, capsules (each including immediate release, timed release and sustained release formulations), granules, and powders. Forms suitable for oral administration also include liquid forms, such as solutions, syrups, elixirs, emulsions, and suspensions. In addition, forms useful for parenteral administration include sterile solutions, emulsions and suspensions.
(33) Also provided is a pharmaceutical composition including an enaminone-grafted trithiocarbonate derivative. To prepare the pharmaceutical composition, one or more enaminone-grafted trithiocarbonate derivative compounds or salt thereof, as the active ingredient, is intimately admixed with a pharmaceutical carrier according to conventional pharmaceutical compounding techniques. Carriers are inert pharmaceutical excipients, including, but not limited to, binders, suspending agents, lubricants, flavorings, sweeteners, preservatives, dyes, and coatings. In preparing compositions in oral dosage form, any of the pharmaceutical carriers known in the art may be employed. For example, for liquid oral preparations, suitable carriers and additives include water, glycols, oils, alcohols, flavoring agents, preservatives, coloring agents and the like; for solid oral preparations, suitable carriers and additives include starches, sugars, diluents, granulating agents, lubricants, binders, disintegrating agents and the like. For parenteral use, the carrier will usually comprise sterile water, though other ingredients, for example, for purposes such as aiding solubility or for preservation, may be included. Injectable suspensions may also be prepared, in which case appropriate liquid carriers, suspending agents and the like may be employed.
(34) A therapeutically effective amount of the enaminone-grafted trithiocarbonate derivative or an amount effective to treat a disease may be determined initially from in vitro assays described herein and adjusted for specific desired compounds using routine methods.
(35) The following examples are provided by way of illustration.
Example 1
Synthesis of (Z)-ethyl 3-(dimethylamino)-2-(((((Z)-1-(dimethylamino)-3-ethoxy-3-oxoprop-1-en-2-yl)thio)carbonothioyl)thio)acrylate (Compound 3)
(36) A mixture of compound 1 (diethyl 2,2-(thiocarbonylbis(sulfanediyl))diacetate) (1 g, 3.5 mmol) and DMF-DMA (5 mL) was fused at 100 C. for 1 hour, then allowed to cool at room temperature overnight to afford compound 3 as a crystal.
(37) The resulting compound 3 had the following characteristics: Yield: 70%; m. p. 156 C.; IR (KBr, cm.sup.1) v=2974, 2911, 2820, 1686, 1613, 1475, 1430, 1405, 1388, 1331, 1261, 1126, 1092, 1042, 840, 763, 524; .sup.1H-NMR (500 MHz, DMSO)=1.05 (t, 7, 6H, OCH.sub.2CH.sub.3), 3.11 (S, 3H, NCH.sub.3), 3.13 (S, 3H, NCH.sub.3), 3.28 (s, 6H, N(CH.sub.3).sub.2) 3.94 (q, 4H, J=7 Hz, OCH.sub.2CH.sub.3); 8.01 (S, 2H, NCHC); .sup.13C-NMR (125 MHz, DMSO)=14.99, 60.14, 81.85, 156.04, 167.4, 233.39; MS (DART): Calcd. For C.sub.15H.sub.25N.sub.2O.sub.4S.sub.3 [M+H].sup.+ 393.10065 found 393.09764, Calcd. For C.sub.14.sup.13CH.sub.25N.sub.2O.sub.4S.sub.3394.10237, [M+2H].sup.+ found 394.10100, Calcd. For C.sub.15H.sub.25N.sub.2O.sub.4S.sub.2.sup.34S, [M+3H].sup.+395.09388 found 395.09344.
Example 2
Single-Crystal X-Ray Diffraction of Compound 3
(38) SHELXT was used to solve the structure. Data were collected on a Bruker APEX-II D8 Venture area diffractometer, equipped with graphite monochromatic Cu K radiation, =1.54178 at 293 (2) K. Cell refinement and data reduction were carried out by Bruker SAINT. The final refinement was carried out by full-matrix least-squares techniques with anisotropic thermal data for nonhydrogen atoms on F. The supplementary crystallographic data for compound 3 and can be obtained free of charge from CCDC 1542020 at the Cambridge Crystallographic Data Centre.
Example 3
In Vitro Antimicrobial Activity
(39) Biological activity of compound 3 as antimicrobial agents was performed according to (Lam et al. 2016). Lyophilized cultures of Streptococcus nutans ATCC 35668, Bacillus subtilis and Brevibacillus laterosporus Wild strains (Gram positive bacteria), Salmonella typhi Wild strain (Gram negative bacteria), Candid albicans ATCC 60193 (yeast), Cryptococcus neoformans Wild strain (yeast), Aspergillus fumigatus AUMC 8794 (mold), and Penicillium chrysogenum AUMC (mold) were grown aerobically on the appropriate medium and in incubating conditions before minimal inhibitory, minimal Bactericidal, and minimal fungicidal concentration testing (MIC, MBC, and MFC). The nutrient broth (Oxoid, UK) and potato dextrose broth (Sigma-Alderich, US) were used to cultivate the bacteria and fungi, respectively.
(40) The total count of microbes was counted by measurement of bacterial and yeast cells; and spores of mold using hemocytometer and account at 400.
(41) The bacterial suspensions were prepared from bacterial cultures which gave an optical density reading of 0.9 at 620 nm. The dilution of bacterial cultures was performed using sterile 0.85% NaCl solution to obtain 310.sup.6 cells/ml in sterile nutrient broth. The fungi were cultivated on potato dextrose agar (PDA) at 28 C. for 7 days, and then the spores were harvested from the surface by sterile 0.85% NaCl solution using a Pasteur pipette. The hypae were removed by filtration with a Whatman filter (Pore size, 8 m) then the inoculum sizes were adjusted to 410.sup.6 CFU/ml.
(42) Compound 3 was diluted in nutrient broth (for bacteria) and RPMI (for fungi) to obtain a desired range of concentrations and a final volume of 100 l in each well of a 96-well plate which also received 100 l of diluted microbial suspensions. The fungal microdilution plates were incubated at 283 C. for 4 days, whereas the bacterial plates were inoculated at 373 C. for 24 hours. A sterile medium alone, and one with inoculum suspension alone, were applied as sterile and growth control. After the incubation, 100 l of each well were cultivated on nutrient agar (for bacteria) and PDA (for fungi), and then the microbial growth was observed. No microbial growth was used to indicate the MBC and MFC.
(43) To determine MIC of the compound 3, a Mueller-Hinton broth and Potato dextrose broth were used for bacteria and fungi, respectively. The test was performed according to two-fold microdilution assay. Compound 3 was dissolved in sterile culture broth to obtain 6.6 mg of compound 3 per mL of the broth. Two-fold serial dilutions were carried out to obtain concentrations ranging from 3.3-0.05 mg/mL, followed by adding 95 L of each dilution per well in 96-well plates, and then each well was inoculated with 5 L of inoculation microbial suspension (510.sup.8 colony form unit (CFU)/ml). The plates were incubated at suitable conditions according to the tested microorganism. After incubation, the microbial growth was detected in the wells by p-iodonitrotetrazolium violet (Sigma, USA) reagent. Each well received 20 L of reagent (0.5 mg/ml) and was then incubated at 371 C. for 30 minutes. A violet color indicated microbial growth in the well. The minimal inhibitory concentration (mg/ml) of compound 3 was estimated as the lowest concentration that inhibited microbial growth. Data are expressed as means.d. of the biological replicates and statistically analyzed using One-Way ANOVA analysis using Tukey test (P<0.05) (SPSS, 13.0).
Example 4
Antiproliferative Activity
(44) HepG2 (human hepatocarcinoma), LoVo (human colorectal adenocarcinoma) and MDA-MB-231 (human breast cancer) cancer cell lines were selected for the in vitro antiproliferative activity. Cells were seeded in 24-well plates at a density of 50,000 cells/well for 24 hours for adherent. After 24 hours, cells were treated with increasing concentrations of compound 3 or an equal volume of vehicle (DMSO) as a control and were incubated for 48 hours. 100 L of MTT reagent (5 mg/ml) were added. The plates were incubated for 2 hours and absorbance was determined at 540 nm in an ELISA plate reader (Thermo, USA). Percentages of cell survival were calculated as follows: % cell survival=(absorbance of treated cells/absorbance of cells with vehicle solvent)100. The 50% inhibitory concentration (IC50) was calculated from the dose-response curve obtained by plotting the percentage of cell survival versus the concentration of compound 3.
(45) Lactate dehydrogenase (LDH) assay was performed to assess the LDH release into the media following compound 3 treatments (IC50) on HepG2, LoVo and MDA-MB-231 cells after 48 hours of incubation. LDH cytotoxicity assay was carried out using an in vitro toxicology assay kit (Sigma Aldrich Inc., USA), according to protocol in the user's manual. The amount of LDH released in culture media was measured at 490 nm using an ELISA plate reader (Thermo, USA).
(46) LoVo and MDA-MB-231 cells were grown in 12-well plates and treated with different concentrations of compound 3 for 48 hours. The morphological changes were observed under light inverted microscope attached to a Leica MC-170 HD camera.
(47) It is to be understood that the enaminone-grafted trithiocarbonate derivative is not limited to the specific embodiments described above, but encompasses any and all embodiments within the scope of the generic language of the following claims enabled by the embodiments described herein, or otherwise shown in the drawings or described above in terms sufficient to enable one of ordinary skill in the art to make and use the claimed subject matter.