NOVEL VACCINES IN PREVENTION AND TREATMENT OF MALARIA
20180186897 ยท 2018-07-05
Inventors
Cpc classification
C07K2319/33
CHEMISTRY; METALLURGY
Y02A50/30
GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
C07K2317/30
CHEMISTRY; METALLURGY
C07K14/70596
CHEMISTRY; METALLURGY
C07K16/28
CHEMISTRY; METALLURGY
A61K39/015
HUMAN NECESSITIES
C07K16/44
CHEMISTRY; METALLURGY
International classification
C07K16/44
CHEMISTRY; METALLURGY
Abstract
The present invention provides a pharmaceutical composition, for example a vaccine, which comprises a RIFIN, which is able to bind to a mutated LAIR-1 fragment, which broadly binds to erythrocytes infected with Plasmodium falciparum. Such a RIFIN may be useful in the prevention and/or treatment of malaria.
Claims
1.-86. (canceled)
87. A pharmaceutical composition comprising a polypeptide comprising a second variable (V2) domain and/or an N-terminal semi-conserved domain of a RIFIN, which is/are able to bind to a LAIR-1 fragment, wherein the LAIR-1 fragment has an amino acid sequence according to SEQ ID NO: 1: TABLE-US-00052 XXLPRPXXSXXXXXXXXLGSXXTXVCRGPXGXXTFRLXXXXXXX.sub.1YX.sub.2XX EXVXXX.sub.3XPXXSEARFRXXSVXXGXXGXXRCXYYXX.sub.4X.sub.5XWSXXSXXXXX XVK wherein X is any amino acid or no amino acid; X.sub.1 is T, L, G, I, R, K or no amino acid; however, if X.sub.2 is N, X.sub.3 is A, X.sub.4 is P and X.sub.5 is P, then X.sub.1 is L, G, I, R, K or no amino acid; X.sub.2 is N, S or T; however, if X.sub.1 is T, X.sub.3 is A, X.sub.4 is P and X.sub.5 is P, then X.sub.2 is S or T; X.sub.3 is A, T, P, or V; however, if X.sub.1 is T, X.sub.2 is N, X.sub.4 is P and X.sub.5 is P, then X.sub.3 is T, P, or V; X.sub.4 is P, S, A, or D; however, if X.sub.1 is T, X.sub.2 is N, X.sub.3 is A and X.sub.5 is P, then X.sub.4 is S, A, or D; and X.sub.5 is P, R, or S; however, if X.sub.1 is T, X.sub.2 is N, X.sub.3 is A and X.sub.4 is P, then X.sub.5 is R, or S; and wherein the LAIR-1 fragment has at least 70% amino acid sequence identity to amino acids 24 to 121 of native human LAIR-1 (SEQ ID NO: 10).
88. The pharmaceutical composition according to claim 87, wherein the polypeptide comprises a second variable (V2) domain of a RIFIN, which is able to bind to a LAIR-1 fragment as defined in claim 87.
89. The pharmaceutical composition according to claim 88, wherein the polypeptide does not comprise an N-terminal semi-conserved domain of a RIFIN as defined in claim 87.
90. The pharmaceutical composition according to claim 88, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 625: TABLE-US-00053 HXTXXXXXAXXXDXE wherein X is any amino acid.
91. The pharmaceutical composition according to claim 88, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 627: TABLE-US-00054 IXXXRXXLXXXXXXXXXMV wherein X is any amino acid.
92. The pharmaceutical composition according to claim 88, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 638 or 639 or a functional sequence variant thereof.
93. The pharmaceutical composition according to claim 87, wherein the polypeptide comprises an N-terminal semi-conserved domain of a RIFIN, which is able to bind to a LAIR-1 fragment as defined in claim 87.
94. The pharmaceutical composition according to claim 93, wherein the polypeptide does not comprise a second variable (V2) domain of a RIFIN as defined in claim 87.
95. The pharmaceutical composition according to claim 93, wherein the N-terminal semi-conserved domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 534 or 535 or a functional sequence variant thereof.
96. The pharmaceutical composition according to claim 87, wherein the polypeptide comprises a truncated RIFIN.
97. The pharmaceutical composition according to claim 87, wherein the polypeptide comprises an amino acid sequence according to SEQ ID NO: 538 (PF3D7_1040300) or according to SEQ ID NO: 536 (PF3D7_1400600) or a functional sequence variant thereof.
98. A method of preventing and/or treating malaria in a subject, wherein the method comprises administering to a subject in need thereof the pharmaceutical composition according to claim 87 in a therapeutically effective amount.
99. A method of preventing and/or treating malaria, wherein the method comprises administering to a subject an isolated polypeptide comprising a second variable (V2) domain and/or an N-terminal semi-conserved domain of a RIFIN, wherein the polypeptide comprising the second variable (V2) domain and/or the N-terminal semi-conserved domain of a RIFIN is able to bind to a LAIR-1 fragment, wherein the LAIR-1 fragment has an amino acid sequence according to SEQ ID NO: 1: TABLE-US-00055 XXLPRPXXSXXXXXXXXLGSXXTXVCRGPXGXXTFRLXXXXXXX.sub.1YX.sub.2XX EXVXXX.sub.3XPXXSEARFRXXSVXXGXXGXXRCXYYXX.sub.4X.sub.5XWSXXSXXXXX XVK wherein X is any amino acid or no amino acid; X.sub.1 is T, L, G, I, R, K or no amino acid; however, if X.sub.2 is N, X.sub.3 is A, X.sub.4 is P and X.sub.5 is P, then X.sub.1 is L, G, I, R, K or no amino acid; X.sub.2 is N, S or T; however, if X.sub.1 is T, X.sub.3 is A, X.sub.4 is P and X.sub.5 is P, then X.sub.2 is S or T; X.sub.3 is A, T, P, or V; however, if X.sub.1 is T, X.sub.2 is N, X.sub.4 is P and X.sub.5 is P, then X.sub.3 is T, P, or V; X.sub.4 is P, S, A, or D; however, if X.sub.1 is T, X.sub.2 is N, X.sub.3 is A and X.sub.5 is P, then X.sub.4 is S, A, or D; and X.sub.5 is P, R, or S; however, if X.sub.1 is T, X.sub.2 is N, X.sub.3 is A and X.sub.4 is P, then X.sub.5 is R or S; and wherein the LAIR-1 fragment has at least 70% amino acid sequence identity to amino acids 24 to 121 of native human LAIR-1 (SEQ ID NO: 10).
100. The method according to claim 99, wherein the polypeptide comprises a second variable (V2) domain of a RIFIN, which is able to bind to a LAIR-1 fragment as defined in claim 87.
101. The method according to claim 100, wherein the polypeptide does not comprise an N-terminal semi-conserved domain of a RIFIN as defined in claim 87.
102. The method according to claim 100, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 625: TABLE-US-00056 HXTXXXXXAXXXDXE wherein X is any amino acid.
103. The method according to claim 100, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 627: TABLE-US-00057 IXXXRXXLXXXXXXXXXMV wherein X is any amino acid.
104. The method according to claim 100, wherein the second variable (V2) domain of a RIFIN comprises an amino acid sequence according to SEQ ID NO: 638 or 639 or a functional sequence variant thereof.
105. The method according to claim 99, wherein the polypeptide comprises an N-terminal semi-conserved domain of a RIFIN, which is able to bind to a LAIR-1 fragment as defined in claim 87.
106. The method according to claim 105, wherein the polypeptide does not comprise a second variable (V2) domain of a RIFIN as defined in claim 87.
107. The method according to claim 105, wherein the polypeptide comprises an amino acid sequence according to SEQ ID NO: 534 or 535 or a functional sequence variant thereof.
108. The method according to claim 99, wherein the polypeptide comprises a truncated RIFIN.
109. The method according to claim 99, wherein the polypeptide comprises an amino acid sequence according to SEQ ID NO: 538 (PF3D7_1040300) or according to SEQ ID NO: 536 (PF3D7_1400600) or a functional sequence variant thereof.
110. A method of preventing and/or treating malaria, in a subject, wherein the method comprises administering to a subject a nucleic acid molecule encoding a polypeptide as defined in claim 99.
111. The method according to claim 110, wherein the nucleic acid molecule comprises a nucleic acid sequence according to SEQ ID NO: 540 or 541 or a functional sequence variant thereof.
112. A vector comprising a nucleic acid molecule as defined in claim 110.
113. A cell comprising a nucleic acid molecule as defined in claim 110.
114. A method for diagnosing malaria in a subject, the method comprising the use of: (a) a polypeptide as defined in claim 99, (b) a nucleic acid molecule encoding the polypeptide of (a), (c) a vector comprising the nucleic acid molecule of (b), or (d) a cell comprising the nucleic acid molecule of (b) or the vector of (c).
115. A method for identification of antibodies binding to infected erythrocytes, the method comprising the use of: (e) a polypeptide as defined in claim 99, (f) a nucleic acid molecule encoding the polypeptide of (a), (g) a vector comprising the nucleic acid molecule of (b), or (h) a cell comprising the nucleic acid molecule of (b) or the vector of (c).
Description
BRIEF DESCRIPTION OF THE FIGURES
[0265] In the following a brief description of the appended figures will be given. The figures are intended to illustrate the present invention in more detail. However, they are not intended to limit the subject matter of the invention in any way.
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EXAMPLES
[0285] In the following, particular examples illustrating various embodiments and aspects of the invention are presented. However, the present invention shall not to be limited in scope by the specific embodiments described herein. The following preparations and examples are given to enable those skilled in the art to more clearly understand and to practice the present invention. The present invention, however, is not limited in scope by the exemplified embodiments, which are intended as illustrations of single aspects of the invention only, and methods which are functionally equivalent are within the scope of the invention. Indeed, various modifications of the invention in addition to those described herein will become readily apparent to those skilled in the art from the foregoing description, accompanying figures and the examples below. All such modifications fall within the scope of the appended claims.
Example 1: Isolation of Human Monoclonal Antibodies that Broadly React with P. falciparum-Infected Erythrocytes (IEs)
[0286] Two African donors (identified as donor C and D) were selected for their high levels of serum antibodies capable of cross-agglutinating erythrocytes infected with different field isolates of P. falciparum. Memory B cells were isolated and immortalized as described by Traggiai, E., et al. An efficient method to make human monoclonal antibodies from memory B cells: potent neutralization of SARS coronavirus. Nat. Med. 10, 871-875 (2004) to isolate monoclonal antibodies. Briefly, memory B cells were isolated from cryopreserved PBMCs using anti-FITC microbeads following staining of PBMCs with CD22-FITC, and were immortalized with Epstein-Barr virus and CpG in multiple wells. After 14 days culture supernatants were screened using a high throughput flow cytometer for their capacity to stain infected erythrocytes (IEs): IEs are stained with SYBR Green I dye (DNA) to discriminate them from uninfected erythrocytes used as control. Supernatants are added on top of IEs and binding of specific antibodies is detected using a secondary-anti-human IgG (Fc-specific) antibody. Positive cultures were expanded and the VH and VL genes from individual clones were sequenced. Several antibodies showed a broad reactivity with the different isolates, while others were specific for a single isolate. The reactivity of the panel of antibodies isolated from donor C and donor D with erythrocytes infected with 8 different field isolates of P. falciparum (9106, 9605, 11019, 9215, 9775, 10975, 10936 and 11014) is shown below in Table 7. An example of IE staining is shown in
[0287] Table 4 shows the panel of antibodies isolated from donor C and donor D (MGC1-MGD56; Table 2) and their reactivity with erythrocytes infected with 8 different field isolates of P. falciparum (9106, 9605, 11019, 9215, 9775, 10975, 10936 and 11014). The numbers indicate the % of IEs that stained positive for the different antibodies. nd=not detectable.
TABLE-US-00046 % parasite recognition 9106 9605 11019 9215 9775 10975 10936 11014 Donor C MGC1 6.7 19.5 32.7 14.9 5.7 1.4 2.0 3.4 MGC2 5.6 22.4 11.9 28.8 2.9 2.6 2.8 1.5 MGC4 6.7 22.2 31.1 21.7 6.1 6.7 2.3 3.6 MGC5 6.6 20.3 37.6 26.4 6.0 3.8 2.1 2.9 MGC7 6.9 22.8 13.8 19.3 4.6 0.7 1.7 2.9 MGC17 1.3 6.8 7.1 16.7 2.5 1.5 2.4 1.6 MGC26 8.5 21.1 50.8 9.5 3.4 7.3 3.6 5.4 MGC28 7.5 20.9 30.0 10.8 9.8 12.3 3.0 2.8 MGC29 6.7 21.8 48.8 26.9 8.2 10.5 3.9 3.7 MGC32 7.8 22.9 38.1 13.1 7.9 3.2 2.9 4.5 MGC33 7.5 22.3 23.5 11.5 9.7 11.5 3.6 2.9 MGC34 6.8 23.7 34.1 27.1 17.5 15.2 11.3 11.4 MGC35 6.5 15.9 3.2 19.5 7.2 7.4 2.5 3.6 MGC36 6.9 17.9 17.9 12.4 6.2 8.6 2.7 4.6 MGC37 7.2 22.2 51.8 9.9 4.0 7.5 4.1 5.8 Donor D MGD21 3.9 24.2 41.4 47.4 11.4 6.5 6.9 9.0 MGD23 5.7 14.7 7.8 11.4 7.3 3.4 4.3 6.3 MGD30 4.2 7.4 4.4 9.0 5.6 6.5 2.6 3.4 MGD33 4.3 12.3 9.6 15.5 8.5 14.2 6.1 7.0 MGD34 5.0 28.4 46.6 35.7 16.0 11.2 8.1 13.0 MGD35 6.1 3.6 6.3 nd nd nd nd nd MGD39 13.7 31.7 43.0 37.4 15.0 14.1 10.5 11.5 MGD41 3.8 17.2 6.8 14.7 8.6 7.3 6.1 6.6 MGD47 10.7 28.7 24.6 22.3 14.4 11.2 11.3 10.2 MGD55 14.3 37.2 33.1 38.8 19.4 15.6 13.3 14.7 MGD56 3.3 17.3 4.3 12.0 6.6 6.7 2.4 9.5 <2% 2-5% 5-10% 10-20% 20-40% >40%
Example 2: The Human Monoclonal Antibodies that Broadly React with P. falciparum-Infected Erythrocytes are Characterized by a Large HCDR3 Containing a Mutated LAIR-1 Exon
[0288] The VH and VL sequences of all of the IE-specific human mAbs of Example 1 were aligned and the V, D and J elements identified using the IMGT database. Surprisingly, all the broadly reactive mAbs isolated from both donors were characterized by an extraordinary long CDRH3 ranging from 120 to 130 amino acids, i.e. broadly reactive antibodies had an insert of more than 100 amino acids between the V and DJ segments, whereas narrowly reactive antibodies showed classical VD) organization of the heavy (H) chain gene. The middle and main part of this CDR3 was found to be highly homologous (92% to 98%) to the third exon plus a intronic sequence of LAIR-1, a gene encoding an inhibitory receptor specific for collagen which is present on chromosome 19. The aminoacidic alignment of these unusual heavy chain variable regions (VH) is shown with reference to the genomic elements (exon and intron) of the LAIR-1 gene (NCBI Reference Sequence: NC_018930.2) in
[0289] Table 5 below shows the VH and VL gene usage of antibodies.
TABLE-US-00047 Heavy chain Light chain VH JH VL JL Donor C MGC4 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC5 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC8 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC29 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC33 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC34 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC35 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC36 IGHV3-7 IGHJ6 IGLV7-43 IGLJ3 MGC2 IGHV3-7 IGHJ6 IGKV1-5 IGKJ2 MGC26 IGHV3-7 IGHJ6 IGKV1-5 IGKJ2 MGC37 IGHV3-7 IGHJ6 IGKV1-5 IGKJ2 MGC1 IGHV3-7 IGHJ6 IGKV4-1 IGKJ2 MGC17 IGHV3-7 IGHJ6 IGKV4-1 IGKJ2 MGC32 IGHV3-7 IGHJ6 IGKV4-1 IGKJ2 MGC7 IGHV3-7 IGHJ6 IGKV1-12 IGKJ4 Donor D MGD21 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD23 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD30 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD33 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD34 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD35 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD39 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD41 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD47 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD55 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5 MGD56 IGHV4-4 IGHJ6 IGKV1-8 IGKJ5
Example 3: Construction of Antibody Variants of MGD21
[0290] Of the antibodies described in Example 1 and Example 2 one broadly binding antibody, namely MGD21, was selected. MGD21 (SEQ ID NOs: 326-343) is a monoclonal antibody that binds to erythrocytes infected with 8/8 primary P. falciparum isolates and carries the LAIR-1 exon+intron insertion (a part of the intron, intron.sub., is shared with MGC antibodies, while the second part, intron.sub., is shared only with MGD antibodies). To understand which elements are required for binding to IEs, variants of the MGD21 mAb were produced, in which single elements (V, D, J and LAIR-1 exon and intron insertions) were either deleted or substituted with corresponding elements taken from an irrelevant antibody (FI499 reactive to influenza virus hemagglutinin, HA). In addition, variants were produced, in which somatic mutations were reverted to the germline configuration. In particular, mutations in the LAIR-1 exon+intron insertion were reverted to the corresponding original genomic sequence of LAIR-1 gene (NCBI Reference Sequence: NC_018930.2).
[0291] The following variants were produced, which are shown schematically in
[0303] Table 6 below provides amino acid and nucleic acid sequences of the heavy chain variable regions of the constructs described above (Example 3).
TABLE-US-00048 TABLE 6 Sequences and Seq IDs of constructs SEQ ID NO Description Sequence* Heavy chain variable regions 542 FI499V_DexinDJ QVQPVQSGAEVKEPGSSVKVSCKTSGGLIRKSAVSWVRQAP aa GQGLEWMGGISALFNTKDYAEKFQGRLTITADESTATAYMEL SSLTSEDTAIYYCATASPLKSQRDTDLPRPSISAEPGTVIPLGSHV TFVCRGPVGVQTFRLERERNYLYSDTEDVSQTSPSESEARFRID SVNAGNAGLFRCIYYKSRKWSEQSDYLELVVKGEDVTWALSQ SQDDPRACPQGELPISTDIYYVDVWGNGTTVTVSS 543 FI499V_DexinDJ CAGGTGCAGCCCGTCCAGTCTGGAGCAGAGGTGAAGGA nucl ACCTGGCAGCTCCGTGAAGGTCTCTTGCAAAACAAGTGG CGGGCTGATCCGCAAAAGTGCCGTGTCATGGGTCCGACA GGCTCCTGGACAGGGACTGGAATGGATGGGAGGCATCA GCGCACTGTTCAACACTAAGGACTACGCCGAAAAATTTCA GGGCCGGCTGACTATTACCGCCGATGAGAGTACAGCCAC TGCTTATATGGAACTGTCTAGTCTGACCAGCGAGGACACA GCTATCTACTATTGCGCAACCGCCTCACCACTGAAGTCCC AGAGAGACACCGACCTGCCAAGACCTTCCATCTCTGCAG AACCTGGCACAGTGATTCCACTGGGGTCCCACGTGACTTT CGTCTGTAGGGGACCAGTGGGCGTCCAGACCTTTCGCCT GGAGCGGGAAAGAAATTACCTGTATTCCGACACTGAGGA CGTGAGCCAGACCAGTCCCTCAGAGAGCGAAGCTAGGTT CCGCATCGATTCCGTGAACGCTGGGAATGCAGGACTGTT TAGATGCATCTACTATAAGTCTAGGAAATGGAGCGAGCA GTCCGACTACCTGGAACTGGTGGTCAAAGGGGAGGATG TGACATGGGCTCTGTCCCAGTCTCAGGACGATCCAAGAG CATGTCCCCAGGGCGAGCTGCCCATCTCTACTGACATCTA CTATGTGGATGTCTGGGGCAACGGGACCACAGTGACCGT CTCAAGC 544 FI499VJ_DexinD QVQPVQSGAEVKEPGSSVKVSCKTSGGLIRKSAVSWVRQAP aa GQGLEWMGGISALFNTKDYAEKFQGRLTITADESTATAYMEL SSLTSEDTAIYYCATASPLKSQRDTDLPRPSISAEPGTVIPLGSHV TFVCRGPVGVQTFRLERERNYLYSDTEDVSQTSPSESEARFRID SVNAGNAGLFRCIYYKSRKWSEQSDYLELVVKGEDVTWALSQ SQDDPRACPQGELPISTDIFDYWGQGTLVTVSS 545 FI499VJ_DexinD CAGGTGCAGCCCGTCCAGTCTGGAGCAGAGGTGAAGGA nucl ACCTGGCAGCTCCGTGAAGGTCTCTTGCAAAACAAGTGG CGGGCTGATCCGCAAAAGTGCCGTGTCATGGGTCCGACA GGCTCCTGGACAGGGACTGGAATGGATGGGAGGCATCA GCGCACTGTTCAACACTAAGGACTACGCCGAAAAATTTCA GGGCCGGCTGACCATTACAGCCGATGAGAGTACTGCCAC CGCTTATATGGAACTGTCTAGTCTGACCAGCGAGGACAC AGCTATCTACTATTGCGCAACCGCCTCACCACTGAAGTCC CAGAGAGACACCGACCTGCCAAGACCTTCCATCTCTGCA GAACCTGGCACAGTGATTCCACTGGGGTCCCACGTGACT TTCGTCTGTAGGGGACCAGTGGGCGTCCAGACCTTTCGC CTGGAGCGGGAAAGAAATTACCTGTATTCCGACACTGAG GACGTGAGCCAGACCAGTCCCTCAGAGAGCGAAGCTAG GTTCCGCATCGATTCCGTGAACGCTGGGAATGCAGGACT GTTTAGATGCATCTACTATAAGTCTAGGAAATGGAGCGAG CAGTCCGACTACCTGGAACTGGTGGTCAAAGGGGAGGA TGTGACTTGGGCTCTGTCCCAGTCTCAGGACGATCCAAG AGCATGTCCCCAGGGCGAGCTGCCCATCTCTACCGACAT TTTCGATTATTGGGGCCAGGGGACACTGGTGACTGTCTC AAGC 546 MGD21_exin_longGS EVQLVETGPGLMKTSGTLSLTCAVSGDYVNTNRRWSWVRQ aa APGKGLEWIGEVHQSGRTNYNPSLKSRVTISVDKSKNQFSLKV DSVTAADTAVYYCARGGGGS GGGGSDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLER ERNYLYSDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKS RKWSEQSDYLELVVKGEDVTWALGGGGS GGGGS GGGGS GGGGSYYVDVWGNGTTVTVSS 547 MGD21_exin_longGS GAAGTGCAGCTGGTGGAAACCGGCCCTGGACTGATGAA nucl GACCTCTGGCACACTGAGTCTGACATGCGCTGTGAGTGG GGACTACGTCAACACTAATCGGAGATGGTCTTGGGTGCG ACAGGCACCAGGAAAAGGACTGGAGTGGATCGGGGAA GTGCACCAGAGCGGAAGGACCAACTATAATCCTAGCCTG AAGTCCCGCGTGACAATTTCAGTCGATAAGAGCAAAAAC CAGTTCTCCCTGAAAGTGGACTCTGTCACTGCCGCTGATA CCGCAGTGTACTATTGTGCCAGAGGCGGGGGAGGCTCT GGGGGAGGCGGGAGTGACCTGCCCAGGCCTAGCATCTC CGCTGAACCAGGGACTGTGATTCCCCTGGGATCTCACGT GACCTTCGTCTGCAGAGGCCCTGTGGGGGTCCAGACATT TCGCCTGGAGCGGGAAAGAAACTACCTGTATTCTGACAC CGAGGATGTGAGTCAGACATCTCCCAGTGAGTCAGAAGC AAGGTTCCGCATCGATTCCGTCAACGCCGGAAATGCTGG CCTGTTTCGATGTATCTACTATAAGAGCCGGAAATGGAGC GAGCAGTCCGACTACCTGGAACTGGTGGTCAAGGGCGA GGATGTGACCTGGGCCCTGGGCGGGGGAGGCTCTGGG GGAGGCGGGAGTGGAGGCGGGGGATCAGGTGGAGGC GGGTCGTACTATGTGGACGTGTGGGGCAACGGGACCAC AGTGACCGTCAGCTCC 548 MGD21_exin_short EVQLVETGPGLMKTSGTLSLTCAVSGDYVNTNRRWSWVRQ GS aa APGKGLEWIGEVHQSGRTNYNPSLKSRVTISVDKSKNQFSLKV DSVTAADTAVYYCARGGGGS DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE QSDYLELVVKGEDVTWALGGGGS YYVDVWGNGTTVTVSS 549 MGD21_exin_short GAAGTGCAGCTGGTGGAAACCGGCCCTGGACTGATGAA GS nucl GACCTCTGGCACACTGAGTCTGACATGCGCTGTGAGTGG GGACTACGTCAACACTAATCGGAGATGGTCTTGGGTGCG ACAGGCACCAGGAAAAGGACTGGAGTGGATCGGGGAA GTGCACCAGAGCGGAAGGACCAACTATAATCCTAGCCTG AAGTCCCGCGTGACAATTTCAGTCGATAAGAGCAAAAAC CAGTTCTCCCTGAAAGTGGACTCTGTCACTGCCGCTGATA CCGCAGTGTACTATTGTGCCAGAGGGGGAGGCGGGAGT GACCTGCCCAGGCCTAGCATCTCCGCTGAACCAGGGACT GTGATTCCCCTGGGATCTCACGTGACCTTCGTCTGCAGAG GCCCTGTGGGGGTCCAGACATTTCGCCTGGAGCGGGAA AGAAACTACCTGTATTCTGACACCGAGGATGTGAGTCAG ACATCTCCCAGTGAGTCAGAAGCAAGGTTCCGCATCGATT CCGTCAACGCCGGAAATGCTGGCCTGTTTCGATGTATCTA CTATAAGAGCCGGAAATGGAGCGAGCAGTCCGACTACCT GGAACTGGTGGTCAAGGGCGAGGATGTGACCTGGGCCC TGGGAGGCGGGGGATCATACTATGTGGACGTGTGGGGC AACGGGACCACAGTGACCGTCAGCTCC 550 MGD21_NOexin EVQLVETGPGLMKTSGTLSLTCAVSGDYVNTNRRWSWVRQ aa APGKGLEWIGEVHQSGRTNYNPSLKSRVTISVDKSKNQFSLKV DSVTAADTAVYYCARASPLKSQRDTGELPISTDIYYVDVWGN GTTVTVSS 551 MGD21_NOexin GAAGTGCAGCTGGTGGAAACCGGCCCTGGACTGATGAA nucl GACTTCAGGAACCCTGAGCCTGACTTGTGCCGTGAGCGG CGACTACGTCAACACCAATCGGAGATGGAGTTGGGTGCG GCAGGCACCAGGAAAAGGCCTGGAGTGGATCGGCGAA GTGCACCAGTCTGGGCGAACAAACTATAATCCCTCTCTGA AGAGTAGAGTGACTATTTCCGTGGACAAGTCTAAAAACCA GTTCAGCCTGAAAGTGGACTCCGTCACAGCCGCTGATAC TGCCGTGTACTATTGTGCAAGGGCCAGTCCCCTGAAGTC ACAGCGCGATACCGGGGAGCTGCCTATCAGCACAGACAT CTACTATGTGGATGTCTGGGGGAATGGAACCACAGTGAC AGTCAGCTCC 552 MGD21_NOin EVQLVETGPGLMKTSGTLSLTCAVSGDYVNTNRRWSWVRQ aa APGKGLEWIGEVHQSGRTNYNPSLKSRVTISVDKSKNQFSLKV DSVTAADTAVYYCARASPLKSQRDTDLPRPSISAEPGTVIPLGS HVTFVCRGPVGVQTFRLERERNYLYSDTEDVSQTSPSESEARF RIDSVNAGNAGLFRCIYYKSRKWSEQSDYLELVVKGELPISTDI YYVDVWGNGTTVTVSS 553 MGD21_NOin GAGGTGCAGCTGGTCGAAACCGGCCCAGGGCTGATGAA nucl GACTTCCGGAACCCTGTCTCTGACATGCGCCGTGTCCGG GGACTACGTCAACACTAATCGGAGATGGTCTTGGGTGAG GCAGGCTCCTGGAAAAGGCCTGGAGTGGATCGGGGAAG TGCACCAGTCCGGACGGACCAACTATAATCCATCTCTGAA GAGTAGAGTGACAATTAGTGTCGATAAGTCAAAAAACCA GTTCTCTCTGAAAGTGGACAGTGTCACAGCCGCTGATACT GCAGTGTACTATTGTGCAAGAGCAAGCCCCCTGAAGTCC CAGAGAGACACCGACCTGCCCAGGCCTTCTATCAGTGCT GAACCAGGCACTGTGATTCCCCTGGGGTCTCATGTGACC TTCGTCTGTAGAGGCCCCGTGGGAGTCCAGACTTTCGC CTGGAGAGGGAACGCAATTACCTGTATTCAGACACCGAG GATGTGAGCCAGACATCACCTAGCGAGTCCGAAGCCCGA TTCCGGATCGACAGTGTGAACGCTGGAAATGCAGGCCTG TTTCGCTGTATCTACTATAAGAGCCGAAAATGGTCAGAGC AGAGCGATTACCTGGAACTGGTGGTCAAAGGCGAGCTG CCTATCAGCACTGACATCTACTATGTGGATGTCTGGGGGA ACGGAACCACAGTGACCGTCAGCTCC 554 MGD21_NOVD DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY aa SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE QSDYLELVVKGEDVTWALSQSQDDPRACPQGELPISTDIYYV DVWGNGTTVTVSS 555 MGD21_NOVD GACCTGCCACGACCATCTATTTCCGCCGAACCTGGGACT nucl GTCATTCCTCTGGGGAGCCACGTCACATTTGTCTGCCGG GGACCTGTCGGGGTGCAGACTTTCCGGCTGGAGCGGGA AAGAAACTACCTGTATTCTGACACCGAAGATGTGAGTCAG ACAAGCCCATCCGAGTCTGAAGCTAGGTTCCGCATCGAC TCCGTCAACGCCGGCAATGCTGGGCTGTTTCGATGCATCT ACTATAAGAGCAGAAAATGGAGCGAGCAGTCCGACTACC TGGAACTGGTGGTCAAGGGAGAGGATGTCACCTGGGCA CTGAGTCAGTCACAGGACGATCCCCGGGCCTGTCCTCAG GGCGAGCTGCCCATCAGCACTGATATCTACTATGTGGAT GTCTGGGGGAATGGCACTACTGTGACCGTCTCAAGC 556 MGD21GL_exin QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP WT aa PGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSS VTAADTAVYYCARASPLKSQRDTDLPRPSISAEPGTVIPLGSHV TFVCRGPVGVQTFRLERERNYLYSDTEDVSQTSPSESEARFRID SVNAGNAGLFRCIYYKSRKWSEQSDYLELVVKGEDVTWALSQ SQDDPRACPQGELPISTDIYYMDVWGKGTTVTVSS 557 MGD21GL_exin CAGGTCCAGCTGCAGGAAAGCGGCCCAGGACTGGTGAA WT nucl GCCTAGCGGAACACTGAGTCTGACTTGTGCCGTGAGCGG AGGGAGCATCAGCTCCTCTAACTGGTGGTCTTGGGTGAG GCAGCCCCCTGGCAAGGGACTGGAGTGGATCGGCGAAA TCTACCACAGCGGGTCCACCAACTATAATCCTTCACTGAA GAGCCGCGTGACAATCAGTGTGGACAAGTCAAAAAATCA GTTCAGCCTGAAACTGAGTTCAGTGACCGCCGCTGATAC AGCAGTCTACTATTGCGCACGGGCCAGCCCACTGAAATC CCAGCGAGACACTGATCTGCCACGGCCCTCTATCAGTGC TGAACCCGGAACAGTGATTCCTCTGGGCTCCCATGTGACT TTCGTCTGTCGCGGACCAGTGGGCGTCCAGACCTTTCGA CTGGAGCGGGAAAGAAACTACCTGTATTCTGACACTGAG GATGTGAGTCAGACCTCACCCAGCGAGTCCGAAGCCAG GTTCCGCATCGACAGCGTCAACGCTGGGAATGCAGGACT GTTTAGATGCATCTACTATAAGTCCAGGAAATGGTCCGAG CAGTCTGACTACCTGGAACTGGTGGTCAAGGGGGAGGA TGTGACATGGGCCCTGTCTCAGAGTCAGGACGATCCTAG AGCTTGTCCACAGGGCGAGCTGCCCATTTCAACCGATATC TATTACATGGATGTCTGGGGCAAGGGCACCACCGTGACC GTGAGCAGC 558 MGD21_wholeGL QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQP aa PGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSS VTAADTAVYYCARASPLKSQRDTEDLPRPSISAEPGTVIPLGSH VTFVCRGPVGVQTFRLERESRSTYNDTEDVSQASPSESEARFRI DSVSEGNAGPYRCIYYKPPKWSEQSDYLELLVKGEDVTWALP QSQLDPRACPQGELPISTDIYYMDVWGKGTTVTVSS 559 MGD21_wholeGL CAGGTGCAGCTGCAGGAAAGCGGACCAGGCCTGGTCAA nucl GCCCTCAGGCACTCTGAGCCTGACCTGCGCTGTGAGTGG CGGGTCAATCAGCTCCTCTAATTGGTGGTCCTGGGTGAG GCAGCCCCCTGGGAAAGGACTGGAGTGGATCGGCGAAA TCTACCACTCTGGGAGTACAAACTATAATCCCAGCCTGAA GTCCCGCGTGACTATTTCCGTGGACAAGTCTAAAAATCAG TTCAGCCTGAAACTGAGTTCAGTGACAGCCGCTGATACTG CAGTCTACTATTGCGCACGAGCCAGTCCTCTGAAGTCCCA GCGGGACACTGAGGACCTGCCTAGACCATCAATCAGCGC CGAGCCTGGAACTGTGATTCCACTGGGCTCTCATGTGAC CTTCGTCTGTAGAGGACCAGTGGGAGTCCAGACCTTCCG GCTGGAGAGAGAATCCCGATCTACCTACAACGACACAGA AGATGTGAGCCAGGCTAGTCCATCAGAGAGCGAAGCAC GGTTTAGAATCGACTCCGTGTCTGAGGGGAATGCCGGAC CCTACAGATGCATCTACTATAAGCCACCCAAATGGTCTGA GCAGAGTGACTATCTGGAACTGCTGGTGAAAGGAGAGG ATGTCACCTGGGCACTGCCTCAGTCTCAGCTGGACCCCA GAGCTTGTCCTCAGGGAGAGCTGCCTATCAGCACCGACA TCTACTATATGGACGTGTGGGGCAAAGGGACCACAGTGA CAGTCAGCTCCGCGTCGACTTCGCA 560 MGD21_NOex EVQLVETGPGLMKTSGTLSLTCAVSGDYVNTNRRWSWVRQ aa APGKGLEWIGEVHQSGRTNYNPSLKSRVTISVDKSKNQFSLKV DSVTAADTAVYYCARASPLKSQRDTGEDVTWALSQSQDDPR ACPQGELPISTDIYYVDVWGNGTTVTVSS 561 MGD21_NOex GAAGTGCAGCTGGTGGAAACCGGCCCTGGACTGATGAA nucl GACTTCCGGAACCCTGTCTCTGACTTGCGCCGTGTCTGGC GACTACGTCAACACCAATCGGAGATGGAGCTGGGTGCG GCAGGCTCCAGGAAAAGGCCTGGAGTGGATCGGCGAAG TGCACCAGTCCGGGCGAACAAACTATAATCCCTCACTGAA GAGCAGAGTGACTATTAGTGTCGATAAGTCAAAAAACCA GTTCTCTCTGAAAGTGGACAGTGTCACAGCCGCTGATACT GCCGTGTACTATTGCGCAAGGGCCAGCCCTCTGAAGTCC CAGAGAGACACCGGGGAGGATGTGACATGGGCTCTGTC TCAGAGTCAGGACGATCCCCGGGCATGTCCTCAGGGCG AACTGCCAATCAGCACCGACATCTACTATGTGGATGTCTG GGGGAATGGAACCACAGTGACAGTCAGCTCC
Example 4: Identification of the Mutated LAIR-1 Exon as the Only Element Required for MGD21 mAb Binding to P. falciparum-Infected Erythrocytes (IEs)
[0304] The 10 antibody variants constructed in Example 3 as well as the antibody MGD21 (cf. Examples 1 and 2) and the antibody FI499 (control: irrelevant antibody reactive to influenza virus hemagglutinin, HA) were expressed in HEK 293 cells and tested for their capacity to stain IEs as described in Example 1. Briefly, IEs are stained with SYBR Green I dye (DNA) to discriminate them from uninfected erythrocytes used as control. The antibody variants are added on top of IEs and binding of specific antibodies to IEs is detected using a secondary-anti-human IgG (Fc-specific) antibody. The binding data are shown in
Example 5: Construction of Ig Fusion Proteins Comprising the Mutated LAIR-1 Fragment
[0305] To investigate whether the mutated LAIR-1 exon alone is sufficient to bind to IEs, six different Ig fusion proteins comprising the mutated LAIR-1 fragment were constructed by inserting: [0306] (a) the mutated LAIR-1 exon, preferably according to SEQ ID NO: 34 or a functional sequence variant thereof; [0307] (b) optionally, one or more further elements (intron segments) of LAIR-1, preferably corresponding to such elements of the antibody MGD21 as shown in
into a plasmid designed for expression of mouse IgG2b fusion proteins (pINFUSE-mIgG2b-Fc2 by Invivogen) or human IgG1 fusion proteins (pINFUSE-hIgG1-Fc2 by Invivogen). Preferred sequences for the constant regions (hinge region and CH2 and CH3 domains) of mouse IgG2b fusion proteins comprise or consist of a sequence according to SEQ ID NO: 562 (amino acid) or SEQ ID NO: 563 (nucleic acid), or functional sequence variants thereof. Preferred sequences for the constant regions (hinge region and CH2 and CH3 domains) of human IgG1 fusion proteins comprise or consist of a sequence according to SEQ ID NO: 564 (amino acid) or SEQ ID NO: 565 (nucleic acid), or functional sequence variants thereof. Preferably, the mutated LAIR-1 fragment (Exon) in the following Ig fusion proteins comprises or consists of an amino acid sequence according to SEQ ID NO: 34 or a functional sequence variant thereof.
[0309] The different fusion proteins are shown schematically in
[0311] An exemplary variable region of such an M1 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 566 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 567 or by a functional sequence variant thereof. More preferably, a complete M1 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 568 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 569 or by a functional sequence variant thereof. [0312] 2. M2 (also referred to as exinDJ-mIgG2b) is formed by (in this order from N- to C-terminus): the mutated LAIR-1 fragment (Exon); the expression product of a LAIR-1 intron fragment (Intron); the expression product of a second D (Diversity) gene segment element of a heavy chain variable region of an IgG-type antibody, preferably of MGD21 (D.sub.); the expression product of a J (Joining) gene segment element of a heavy chain variable region of an IgG-type antibody, preferably of MGD21 (JH6); followed by a hinge region and CH2 and CH3 domains from mouse IgG2b. [0313] An exemplary variable region of such an M2 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 572 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 573 or by a functional sequence variant thereof. More preferably, a complete M2 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 574 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 575 or by a functional sequence variant thereof. [0314] 3. M3 (also referred to as exin-mIgG2b) is formed by (in this order from N- to C-terminus): the mutated LAIR-1 fragment (Exon); the expression product of a partial LAIR-1 intron fragment (Intron.sub.); followed by a hinge region and CH2 and CH3 domains from mouse IgG2b. [0315] An exemplary variable region of such an M3 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 576 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 577 or by a functional sequence variant thereof. More preferably, a complete M3 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 578 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 579 or by a functional sequence variant thereof. [0316] 4. M4 (also referred to as ex-mIgG2b) is formed by (in this order from N- to C-terminus): the mutated LAIR-1 fragment (Exon); followed by a hinge region and CH2 and CH3 domains from mouse IgG2b. [0317] An exemplary variable region of such an M4 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 580 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 581 or by a functional sequence variant thereof. More preferably, a complete M4 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 582 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 583 or by a functional sequence variant thereof. [0318] 5. H1 (also referred to as DexinDJ-hIgG1) is formed by (in this order from N- to C-terminus): the expression product of a first D (Diversity) gene segment element of a heavy chain variable region of an IgG-type antibody, preferably of MGD21 (D.sub.); the mutated LAIR-1 fragment (Exon); the expression product of a LAIR-1 intron fragment (Intron); the expression product of a second D (Diversity) gene segment element of a heavy chain variable region of an IgG-type antibody, preferably of MGD21 (D.sub.); the expression product of a J (Joining) gene segment element of a heavy chain variable region of an IgG-type antibody, preferably of MGD21 (JH6); followed by a hinge region and CH2 and CH3 domains from human IgG1.
[0319] An exemplary variable region of such an H1 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 566 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 567 or by a functional sequence variant thereof. More preferably, a complete H1 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 570 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 571 or by a functional sequence variant thereof. [0320] 6. H2 (also referred to as ex-hIgG1) is formed by (in this order from N- to C-terminus): the mutated LAIR-1 fragment (Exon); followed by a hinge region and CH2 and CH3 domains from human IgG1. [0321] An exemplary variable region of such an H2 fusion protein, which is particularly preferred, comprises or consists of an amino acid sequence according to SEQ ID NO: 580 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 581 or by a functional sequence variant thereof. More preferably, a complete H2 fusion protein comprises or consists of an amino acid sequence according to SEQ ID NO: 584 or according to a functional sequence variant thereof, which may preferably be encoded by a nucleic acid sequence according to SEQ ID NO: 585 or by a functional sequence variant thereof.
[0322] Table 7 below shows the amino acid and nucleotide sequences of the antibody constructs of Example 5, whereby the constant chain sequences are identical for the mouse IgG2b-antibody constructs M1, M2, M3, and M4 (mIgG2b) and for the human IgG1-antibody constructs H1 and H2 (hIgG1).
TABLE-US-00049 TABLE 7 Sequences and Seq IDs of Ig fusion proteins SEQ ID NO Description Sequence* Constant chains 562 mIgG2b aa AMVRSPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKD VLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQ THREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIE RTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDIS VEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKT DSFSCNVRHEGLKNYYLKKTISRSPGK 563 mIgG2b nucl GCCATGGTTAGATCTCCCAGCGGGCCCATTTCAACAATCA ACCCCTGTCCTCCATGCAAGGAGTGTCACAAATGCCCAG CTCCTAACCTCGAGGGTGGACCATCCGTCTTCATCTTCCC TCCAAATATCAAGGATGTACTCATGATCTCCCTGACACCC AAGGTCACGTGTGTGGTGGTGGATGTGAGCGAGGATGA CCCAGACGTCCAGATCAGCTGGTTTGTGAACAACGTGGA AGTACACACAGCTCAGACACAAACCCATAGAGAGGATTA CAACAGTACTATCCGGGTGGTCAGCACCCTCCCCATCCA GCACCAGGACTGGATGAGTGGCAAGGAGTTCAAATGCA AGGTCAACAACAAAGACCTCCCATCACCCATCGAGAGAA CCATCTCAAAAATTAAAGGGCTAGTCAGAGCTCCACAAGT ATACATCTTGCCGCCACCAGCAGAGCAGTTGTCCAGGAA AGATGTCAGTCTCACTTGCCTGGTCGTGGGCTTCAACCCT GGAGACATCAGTGTGGAGTGGACCAGCAATGGGCATAC AGAGGAGAACTACAAGGACACCGCACCAGTCCTGGACTC TGACGGTTCTTACTTCATATATAGCAAGCTCAATATGAAAA CAAGCAAGTGGGAGAAAACAGATTCCTTCTCATGCAACG TGAGACACGAGGGTCTGAAAAATTACTACCTGAAGAAGA CCATCTCCCGGTCTCCGGGTAAA 564 hIgG1 aa AMVRSDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEV TCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTY RWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQP REPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQ PENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVM HEALHNHYTQKSLSLSPGK 565 hIgG1 nucl GCCATGGTTAGATCTGACAAAACTCACACATGCCCACCGT GCCCAGCACCTGAACTCCTGGGGGGACCGTCAGTCTTCC TCTTCCCCCCAAAACCCAAGGACACCCTCATGATCTCCCG GACCCCTGAGGTCACATGCGTGGTGGTGGACGTGAGCC ACGAAGACCCTGAGGTCAAGTTCAACTGGTACGTGGACG GCGTGGAGGTGCATAATGCCAAGACAAAGCCGCGGGAG GAGCAGTACAACAGCACGTACCGTGTGGTCAGCGTCCTC ACCGTCCTGCACCAGGACTGGCTGAATGGCAAGGAGTAC AAGTGCAAGGTCTCCAACAAAGCCCTCCCAGCCCCCATC GAGAAAACCATCTCCAAAGCCAAAGGGCAGCCCCGAGA ACCACAGGTGTACACCCTGCCCCCATCCCGGGATGAGCT GACCAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGG CTTCTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAA TGGGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGT GCTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTC ACCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTT CTCATGCTCCGTGATGCATGAGGCTCTGCACAACCACTAC ACGCAGAAGAGCCTCTCCCTGTCTCCGGGTAAA MGD21-DexinDJ-mIgG2b 566 DexinDJ variable ASPLKSQRDTDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTF part aa RLERERNYLYSDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCI YYKSRKWSEQSDYLELVVKGEDVTWALSQSQDDPRACPQGE LPISTDIYYVDVWGNGTTVTVSS 567 DexinDJ variable gcgtctccactcaaatctcagagggacaccgatctgcccagaccctccatctcggctg part nucl agccgggcaccgtgatccccctggggagccatgtgactttcgtgtgccggggcccggt tggggttcaaacattccgcctggagagggagaggaattatttatacagtgatactgaaga tgtgtctcaaactagtccatctgagtcggaggccagattccgcattgactcagtaaatgc aggcaatgccgggctttttcgctgcatctattacaagtcccgtaaatggtctgagcagag tgactacctggagctggtggtgaaaggtgaggacgtcacctgggccctgtcccagtctc aagacgaccctcgagcttgtccccagggggagctccccataagtaccgatatttacta cgtggacgtctggggcaacgggaccacggtcaccgtctcctca 568 DexinDJ-mIgG2b ASPLKSQRDTDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTF complete RLERERNYLYSDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCI sequence aa YYKSRKWSEQSDYLELVVKGEDVTWALSQSQDDPRACPQGE LPISTDIYYVDVWGNGTTVTVSSAMVRSPSGPISTINPCPPCKE CHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSED DPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQH QDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPP AEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAP VLDSDCSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLKNYYLKK TISRSPGK 569 DexinDJ-mIgG2b gcgtctccactcaaatctcagagggacaccgatctgcccagaccctccatctcggctg complete agccgggcaccgtgatccccctggggagccatgtgactttcgtgtgccggggcccggt sequence nucl tggggttcaaacattccgcctggagagggagaggaattatttatacagtgatactgaaga tgtgtctcaaactagtccatctgagtcggaggccagattccgcattgactcagtaaatgc aggcaatgccgggctttttcgctgcatctattacaagtcccgtaaatggtctgagcagag tgactacctggagctggtggtgaaaggtgaggacgtcacctgggccctgtcccagtctc aagacgaccctcgagcttgtccccagggggagctccccataagtaccgatatttacta cgtggacgtctggggcaacgggaccacggtcaccgtctcctcaGCCATGGTTA GATCTCCCAGCGGGCCCATTTCAACAATCAACCCCTGTCC TCCATGCAAGGAGTGTCACAAATGCCCAGCTCCTAACCTC GAGGGTGGACCATCCGTCTTCATCTTCCCTCCAAATATCA AGGATGTACTCATGATCTCCCTGACACCCAAGGTCACGTG TGTGGTGGTGGATGTGAGCGAGGATGACCCAGACGTCC AGATCAGCTGGTTTGTGAACAACGTGGAAGTACACACAG CTCAGACACAAACCCATAGAGAGGATTACAACAGTACTAT CCGGGTGGTCAGCACCCTCCCCATCCAGCACCAGGACTG GATGAGTGGCAAGGAGTTCAAATGCAAGGTCAACAACAA AGACCTCCCATCACCCATCGAGAGAACCATCTCAAAAATT AAAGGGCTAGTCAGAGCTCCACAAGTATACATCTTGCCG CCACCAGCAGAGCAGTTGTCCAGGAAAGATGTCAGTCTC ACTTGCCTGGTCGTGGGCTTCAACCCTGGAGACATCAGT GTGGAGTGGACCAGCAATGGGCATACAGAGGAGAACTA CAAGGACACCGCACCAGTCCTGGACTCTGACGGTTCTTA CTTCATATATAGCAAGCTCAATATGAAAACAAGCAAGTGG GAGAAAACAGATTCCTTCTCATGCAACGTGAGACACGAG GGTCTGAAAAATTACTACCTGAAGAAGACCATCTCCCGGT CTCCGGGTAAA 570 DexinDJ-hIgG1 ASPLKSQRDTDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTF complete RLERERNYLYSDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCI sequence aa YYKSRKWSEQSDYLELVVKGEDVTWALSQSQDDPRACPQGE LPISTDIYYVDVWGNGTTVTVSSAMVRSDKTHTCPPCPAPELL GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWY VDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEY KCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQV SLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFL YSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK 571 DexinDJ-hIgG1 gcgtctccactcaaatctcagagggacaccgatctgcccagaccctccatctcggctg complete agccgggcaccgtgatccccctggggagccatgtgactttcgtgtgccggggcccggt sequence nucl tggggttcaaacattccgcctggagagggagaggaattatttatacagtgatactgaaga tgtgtctcaaactagtccatctgagtcggaggccagattccgcattgactcagtaaatgc aggcaatgccgggctttttcgctgcatctattacaagtcccgtaaatggtctgagcagag tgactacctggagctggtggtgaaaggtgaggacgtcacctgggccctgtcccagtctc aagacgaccctcgagcttgtccccagggggagctccccataagtaccgatatttacta cgtggacgtctggggcaacgggaccacggtcaccgtctcctcaGCCATGGTTA GATCTGACAAAACTCACACATGCCCACCGTGCCCAGCAC CTGAACTCCTGGGGGGACCGTCAGTCTTCCTCTTCCCCCC AAAACCCAAGGACACCCTCATGATCTCCCGGACCCCTGA GGTCACATGCGTGGTGGTGGACGTGAGCCACGAAGACC CTGAGGTCAAGTTCAACTGGTACGTGGACGGCGTGGAG GTGCATAATGCCAAGACAAAGCCGCGGGAGGAGCAGTA CAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCT GCACCAGGACTGGCTGAATGGCAAGGAGTACAAGTGCA AGGTCTCCAACAAAGCCCTCCCAGCCCCCATCGAGAAAA CCATCTCCAAAGCCAAAGGGCAGCCCCGAGAACCACAG GTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAG AACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTTCTATC CCAGCGACATCGCCGTGGAGTGGGAGAGCAATGGGCAG CCGGAGAACAACTACAAGACCACGCCTCCCGTGCTGGAC TCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGG ACAAGAGCAGGTGGCAGCAGGGGAACGTCTTCTCATGCT CCGTGATGCATGAGGCTCTGCACAACCACTACACGCAGA AGAGCCTCTCCCTGTCTCCGGGTAAA MGD21-exinDJ-mIgG2b 572 exinDJ variable DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY part aa SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE QSDYLELVVKGEDVTWALSQSQDDPRACPQGELPISTDIYYV DVWGNGTTVTVSS 573 exinDJ variable gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc part nucl catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaggtga ggacgtcacctgggccctgtcccagtctcaagacgaccctcgagcttgtccccaggg ggagctccccataagtaccgatatttactacgtggacgtctggggcaacgggaccacg gtcaccgtctcctca 574 exinDJ-mIgG2b DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY complete SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE sequence aa QSDYLELVVKGEDVTWALSQSQDDPRACPQGELPISTDIYYV DVWGNGTTVTVSSAMVRSDKTHTCPPCPAPELLGGPSVFLFP PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH NAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNK ALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVK GFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVD KSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK 575 exinDJ-mIgG2b gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc complete catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga sequence nucl gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaggtga ggacgtcacctgggccctgtcccagtctcaagacgaccctcgagcttgtccccaggg ggagctccccataagtaccgatatttactacgtggacgtctggggcaacgggaccacg gtcaccgtctcctcaGCCATGGTTAGATCTGACAAAACTCACACA TGCCCACCGTGCCCAGCACCTGAACTCCTGGGGGGACC GTCAGTCTTCCTCTTCCCCCCAAAACCCAAGGACACCCTC ATGATCTCCCGGACCCCTGAGGTCACATGCGTGGTGGTG GACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGG TACGTGGACGGCGTGGAGGTGCATAATGCCAAGACAAA GCCGCGGGAGGAGCAGTACAACAGCACGTACCGTGTGG TCAGCGTCCTCACCGTCCTGCACCAGGACTGGCTGAATG GCAAGGAGTACAAGTGCAAGGTCTCCAACAAAGCCCTCC CAGCCCCCATCGAGAAAACCATCTCCAAAGCCAAAGGGC AGCCCCGAGAACCACAGGTGTACACCCTGCCCCCATCCC GGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCTGC CTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGGAG TGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAGAC CACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTC TACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAGCA GGGGAACGTCTTCTCATGCTCCGTGATGCATGAGGCTCT GCACAACCACTACACGCAGAAGAGCCTCTCCCTGTCTCC GGGTAAA MGD21-exin-mIgG2b 576 exin variable part DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY aa SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE QSDYLELVVKGEDVTWAL 577 exin variable part gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc nucl catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaggtga ggacgtcacctgggccctg 578 exin-mIgG2b DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY complete SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE sequence aa QSDYLELVVKGEDVTWALAMVRSDKTHTCPPCPAPELLGGPS VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCK VSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLT CLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK 579 exin-mIgG2b gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc complete catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga sequence nucl gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaggtga ggacgtcacctgggccctgGCCATGGTTAGATCTGACAAAACTCA CACATGCCCACCGTGCCCAGCACCTGAACTCCTGGGGGG ACCGTCAGTCTTCCTCTTCCCCCCAAAACCCAAGGACACC CTCATGATCTCCCGGACCCCTGAGGTCACATGCGTGGTG GTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAAC TGGTACGTGGACGGCGTGGAGGTGCATAATGCCAAGAC AAAGCCGCGGGAGGAGCAGTACAACAGCACGTACCGTG TGGTCAGCGTCCTCACCGTCCTGCACCAGGACTGGCTG AATGGCAAGGAGTACAAGTGCAAGGTCTCCAACAAAGCCC TCCCAGCCCCCATCGAGAAAACCATCTCCAAAGCCAAAG GGCAGCCCCGAGAACCACAGGTGTACACCCTGCCCCCAT CCCGGGATGAGCTGACCAAGAACCAGGTCAGCCTGACCT GCCTGGTCAAAGGCTTCTATCCCAGCGACATCGCCGTGG AGTGGGAGAGCAATGGGCAGCCGGAGAACAACTACAAG ACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCC TCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCAG CAGGGGAACGTCTTCTCATGCTCCGTGATGCATGAGGCT CTGCACAACCACTACACGCAGAAGAGCCTCTCCCTGTCTC CGGGTAAA MGD21-ex-mIgG2b 580 exon variable DLPRPSISAEPCTVIPLGSHVTFVCRCPVGVQTFRLERERNYLYSDTEDVSQTS part aa PSESEARFRIDSVNAGNAGLFRCIYYKSRKWSEQSDYLELVVK 581 exon variable gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc part nucl catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaa 582 ex-mIgG2b DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY complete SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE sequence aa QSDYLELVVKAMVRSPSGPISTINPCPPCKECHKCPAPNLEGG PSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVN NVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKC KVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLT CLVVGFNPGDISVEWTSNCHTEENYKDTAPVLDSDGSYFIYS KLNMKTSKWEKTDSFSCNVRHEGLKNYYLKKTISRSPGK 583 ex-mIgG2b gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc complete catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga sequence nucl gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaGCC ATGGTTAGATCTCCCAGCGGGCCCATTTCAACAATCAACC CCTGTCCTCCATGCAAGGAGTGTCACAAATGCCCAGCTCC TAACCTCGAGGGTGGACCATCCGTCTTCATCTTCCCTCCA AATATCAAGGATGTACTCATGATCTCCCTGACACCCAAGG TCACGTGTGTGGTGGTGGATGTGAGCGAGGATGACCCA GACGTCCAGATCAGCTGGTTTGTGAACAACGTGGAAGTA CACACAGCTCAGACACAAACCCATAGAGAGGATTACAAC AGTACTATCCGGGTGGTCAGCACCCTCCCCATCCAGCAC CAGGACTGGATGAGTGGCAAGGAGTTCAAATGCAAGGT CAACAACAAAGACCTCCCATCACCCATCGAGAGAACCATC TCAAAAATTAAAGGGCTAGTCAGAGCTCCACAAGTATACA TCTTGCCGCCACCAGCAGAGCAGTTGTCCAGGAAAGATG TCAGTCTCACTTGCCTGGTCGTGGGCTTCAACCCTGGAGA CATCAGTGTGGAGTGGACCAGCAATGGGCATACAGAGG AGAACTACAAGGACACCGCACCAGTCCTGGACTCTGACG GTTCTTACTTCATATATAGCAAGCTCAATATGAAAACAAGC AAGTGGGAGAAAACAGATTCCTTCTCATGCAACGTGAGA CACGAGGGTCTGAAAAATTACTACCTGAAGAAGACCATCT CCCGGTCTCCGGGTAAA 584 ex-hIgG1 DLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERERNYLY complete SDTEDVSQTSPSESEARFRIDSVNAGNAGLFRCIYYKSRKWSE sequence aa QSDYLELVVKAMVRSDKTHTCPPCPAPELLGGPSVFLFPPKPK DTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKCFYPS DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW QQGNVFSCSVMHEALHNHYTQKSLSLSPGK 585 ex-hIgG1 gatctgcccagaccctccatctcggctgagccgggcaccgtgatccccctggggagc complete catgtgactttcgtgtgccggggcccggttggggttcaaacattccgcctggagaggga sequence nucl gaggaattatttatacagtgatactgaagatgtgtctcaaactagtccatctgagtcggag gccagattccgcattgactcagtaaatgcaggcaatgccgggctttttcgctgcatctatt acaagtcccgtaaatggtctgagcagagtgactacctggagctggtggtgaaaGCC ATGGTTAGATCTGACAAAACTCACACATGCCCACCGTGCC CAGCACCTGAACTCCTGGGGGGACCGTCAGTCTTCCTCTT CCCCCCAAAACCCAAGGACACCCTCATGATCTCCCGGAC CCCTGAGGTCACATGCGTGGTGGTGGACGTGAGCCACG AAGACCCTGAGGTCAAGTTCAACTGGTACGTGGACGGCG TGGAGGTGCATAATGCCAAGACAAAGCCGCGGGAGGAG CAGTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACC GTCCTGCACCAGGACTGGCTGAATGGCAAGGAGTACAA GTGCAAGGTCTCCAACAAAGCCCTCCCAGCCCCCATCGA GAAAACCATCTCCAAAGCCAAAGGGCAGCCCCGAGAACC ACAGGTGTACACCCTGCCCCCATCCCGGGATGAGCTGAC CAAGAACCAGGTCAGCCTGACCTGCCTGGTCAAAGGCTT CTATCCCAGCGACATCGCCGTGGAGTGGGAGAGCAATG GGCAGCCGGAGAACAACTACAAGACCACGCCTCCCGTG CTGGACTCCGACGGCTCCTTCTTCCTCTACAGCAAGCTCA CCGTGGACAAGAGCAGGTGGCAGCAGGGGAACGTCTTC TCATGCTCCGTGATGCATGAGGCTCTGCACAACCACTACA CGCAGAAGAGCCTCTCCCTGTCTCCGGGTAAA
Example 6: Ig Fusion Proteins Comprising the Mutated LAIR-1 Fragment Bind to IEs
[0323] The four exemplary mouse IgG2b fusion proteins constructed in Example 5 (i.e. one of each type: M1, M2, M3, and M4), which were consisting of amino acid sequences as outlined for the complete fusion protein, respectively, were used to investigate whether the mutated LAIR-1 fragment is sufficient to bind to infected erythrocytes (IEs). To this end, HEK 293 cells were transfected with the fusion proteins only and supernatants were collected and tested for binding to IEs as described in Example 1. Briefly, IEs are stained with SYBR Green I dye (DNA) to discriminate them from uninfected erythrocytes used as control. The surnatants are added on top of IEs and binding of fusion proteins to IEs is detected using a secondary-anti-human or anti-mouse IgG (Fc-specific) antibody.
[0324] All fusion proteins were found to bind to infected erythrocytes (
Example 7: Antibodies and Ig Fusion Proteins Efficiently Opsonize and Agglutinate P. falciparum-Infected Erythrocytes
[0325] To investigate the potential therapeutic impact of selected broadly reactive antibodies of Example 1 and of the Ig fusion proteins constructed in Example 5, i.e. whether these antibodies/fusion proteins could opsonize infected erythrocytes and thus mediate their phagocytosis and destruction by mononuclear phagocytes, their capacity to opsonize infected erythrocytes was measured.
[0326] To this end, P. falciparum (3D7) were stained with DAPI and mixed with different concentrations of the two exemplary human IgG1 fusion proteins constructed in Example 5 (i.e. one of each type: H1 and H2), which were consisting of amino acid sequences as outlined for the complete fusion protein, respectively. Thereafter, they were incubated with human monocytes at 37 C. for 1 hour.
[0327] Thereafter, monocytes were stained with anti-CD14-APC to measure the fraction of monocytes that contained parasites. The results are shown in
[0328] The results demonstrate that low concentrations of the two exemplary human IgG1 fusion proteins constructed in Example 5 can efficiently opsonize infected erythrocytes. These findings indicate that the Ig fusion proteins constructed in Example 5 can potently mediate phagocytosis and destruction of infected erythrocytes in vivo.
[0329] Finally, it was tested whether the antibodies MGD21 and MGC34 were able to agglutinate erythrocytes infected with P. falciparum 3D7 or the Kenyan P. falciparum isolate 11019. As shown in
[0330] Next, P. falciparum (3D7 or 11019) were stained with DAPI and mixed with different concentrations of the five broadly reactive antibodies described in Table 2 and Example 1 (i.e. one of each type: MGD21, MGD47, MGD55, MGC28 and MGC34). BKC3 was used as control. Thereafter, they were incubated with human monocytes at 37 C. for 1 hour and, then, monocytes were stained with anti-CD14-APC to measure the fraction of monocytes that contained parasites. The results are shown in
Example 8: A Model of the Mutated LAIR-1 Fragment: Somatic Mutations in the LAIR1 Fragment are Critical Both for Binding IE and Losing Binding to Collagen
[0331] The mutated LAIR-1 fragment of the antibodies of Example 1 has a sequence homology ranging from 84% to 96% with the amino acids 24 to 121 of native human LAIR-1 (SEQ ID NO: 14; for example: MGD53_exon=96%; MGC2_exon=91%; MGD21_exon=86%; MGD35_exon=84%).
[0332] From the human monoclonal antibodies of Example 1 those antibodies were selected, which most strongly bind to the most of the IEs infected with different P. falciparum strains (broadest binding to IEs). These were MGD21, MGD34, MGD39, MGD47, and MGD55 (cf. Table 7 of Example 1). An alignment of the amino acid sequences of the LAIR-1 exon fragment of these antibodies, i.e. amino acid sequences according to SEQ ID NOs: 83, 91, 95, 99 and 101 with an exemplary genomic LAIR-1 sequence, revealed five mutated residues, which are crucial to increase the affinity and the breadth of binding to P. falciparum-IE. The same five mutated residues were also found to be important for losing binding to collagen that is the natural ligand of the native LAIR-1 receptor (see Example 9). The five crucial positions are T67, N69, A77, P106 and P107 and are shown in frames in
[0333] The mutated LAIR-1 fragment according to the present invention was modelled based on a crystal structure of native LAIR-1 extracellular domain (residues: 24 to 121) (
T67, N69, A77, P106, and P107 (FIG. 10).
[0334] Preferred mutations are shown below in Table 8, with T67L, N69S, A77T, P106S, and P107R being the most preferred mutations for each of the five positions.
TABLE-US-00050 TABLE 8 preferred mutations for each of the five positions in the mutated LAIR-1 fragment. Position Mutation T67 T67L, T67G, T67I, T67R, T67K N69 N69S, N69T A77 A77T, A77P, A77V P106 P106S, P106A, P106D P107 P107R, P107S
Example 9: Identification of Mutations of LAIR1 Fragment that are Crucial for Binding to P. falciparum-IE
[0335] To identify which of the five mutations are crucial for binding to IEs, fusion proteins comprising the LAIR-1 fragment, which was either unmutated (SEQ ID NO: 14) or carrying one or more of the following five mutations: T67L (L); N69S (S1); A77T (T); P106S (S2); and P107R (R), were produced. The principal structure of these fusion proteins (i.e. except for the mutated LAIR-1 fragment) is identical to that of H2 of Example 5 as described above (also referred to as ex-hIgG1). While in the construct H2 of Example 5 (also referred to as ex-hIgG1) the mutated LAIR-1 exon of the antibody MGD21 was used (SEQ ID NO: 83), the present constructs are instead based on the native human LAIR-1 fragment (amino acids 24-121; SEQ ID NO: 14) and differ from that (i.e. from SEQ ID NO: 14) only in one or more of the following five mutations: T67L (L); N69S (S1); A77T (T); P106S (S2); and P107R (R).
[0336] Table 9 shows SEQ ID and sequences of the different fusion proteins.
TABLE-US-00051 TABLE 9 Sequences and Seq ID NOs of the LAIR-1 Ig fusion protein constructs of Example 9, whereby only the sequences of the (mutated) LAIR-1 fragment are shown. Mutations in comparison to native human LAIR-1 (SEQ ID NO: 14) are shown underlined in the amino acid sequence. SEQ ID NO Description Sequence* 10 LAIR1ex aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSE QSDYLELLVK 586 LAIR1ex nucl GAGGACCTGCCAAGACCCAGCATCTCCGCAGAACCTGG GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACAACGACACAGAGGACGTGAG CCAGGCCTCACCCAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 587 LAIR1ex +L aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSE QSDYLELLVK 588 LAIR1ex +L nucl GAGGACCTGCCAAGACCCAGCATCTCCGCAGAACCTGG GACCGTGATTCCACTGGGCTCCCACGTGACATTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACAACGACACAGAGGACGTGAG CCAGGCCTCACCAAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 589 LAIR1ex +LR aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPRKWSE QSDYLELLVK 590 LAIR1ex +LR nucl GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG GACCGTGATTCCCCTGGGCTCCCACGTGACATTCGTCTGC AGGGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACAACGACACCGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCTTACAGATG CATCTACTATAAGCCAAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 591 LAIR1ex +LS1 aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQ SDYLELLVK 592 LAIR1ex +LSI GAGGACCTGCCAAGACCCAGCATCTCCGCAGAACCTGG nucl GACCGTGATTCCACTGGGCTCCCACGTGACATTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACTCCGACACAGAGGACGTGAG CCAGGCCTCACCAAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 593 LAIR1ex +LS1R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY aa SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPRKWSEQ SDYLELLVK 594 LAIR1ex +LS1R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACCGTGATTCCCCTGGGCTCCCACGTGACATTCGTCTGC AGGGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACTCCGACACCGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCTTACAGATG CATCTACTATAAGCCAAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 595 LAIR1ex +LS1S2R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY aa SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKSRKWSEQ SDYLELLVK 596 LAIR1ex +LS1S2R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACCGTGATTCCCCTGGGCTCCCACGTGACATTCGTCTGC AGGGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACTCCGACACCGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCATACAGATG CATCTACTATAAGAGCAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 597 LAIR1ex +LS1T aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY SDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQ SDYLELLVK 598 LAIR1ex +LS1T GAGGACCTGCCAAGACCCAGCATCTCCGCCGAACCTGG nucl GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTCTGTACTCCGACACCGAGGACGTGAG CCAGACATCACCCAGCGAGTCCGAAGCCCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCTGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 599 LAIR1ex +LS1TR EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY aa SDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKPRKWSEQ SDYLELLVK 600 LAIR1ex +LS1TR GAGGACCTGCCTAGACCTAGCATCTCCGCCGAACCAGGG nucl ACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGCA GAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCGC GAATCTCGAAGTCTGTACTCCGACACCGAGGACGTGAGC CAGACATCACCTAGCGAGTCCGAAGCCCGGTTCAGAATC GACTCTGTCAGTGAAGGAAACGCTGGCCCTTACAGATGC ATCTACTATAAGCCAAGAAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 601 LAIR1ex +LS1TS2R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY aa SDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKSRKWSEQ SDYLELLVK 602 LAIR1ex +LS1TS2R GAGGACCTGCCTAGACCTAGCATCTCCGCCGAACCAGGG nucl ACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGCA GAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCGC GAATCTCGAAGTCTGTACTCCGACACCGAGGACGTGAGC CAGACATCACCTAGCGAGTCCGAAGCCCGGTTCAGAATC GACTCTGTCAGTGAAGGAAACGCTGGCCCATACAGATGC ATCTACTATAAGAGCAGAAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 603 LAIR1ex +LS2R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY aa NDTEDVSQASPSESEARFRIDSVSEGNAGPYROYYKSRKWSE QSDYLELLVK 604 LAIR1ex +LS2R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACCGTGATTCCCCTGGGCTCCCACGTGACATTCGTCTGC AGGGGCCCCGTGGGAGTCCAGACTTTTAGGCTGGAGCG CGAATCTCGAAGTCTGTACAACGACACCGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCATACAGATG CATCTACTATAAGTCTAGAAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 605 LAIR1ex +LT aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSLY NDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSE QSDYLELLVK 606 LAIR1ex +LT nucl GAGGACCTGCCAAGACCCAGCATCTCCGCCGAACCTGG GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTCTGTACAACGACACCGAGGACGTGAG CCAGACATCACCCAGCGAGTCCGAAGCCCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCTGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 607 LAIR1ex +R aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPRKWSE QSDYLELLVK 608 LAIR1ex +R nucl GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG GACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACAACGACACAGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCTTACAGATG CATCTACTATAAGCCAAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 609 LAIR1ex +S1 aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQ SDYLELLVK 610 LAIR1ex +S1 nucl GAGGACCTGCCAAGACCCAGCATCTCCGCAGAACCTGG GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACTCCGACACAGAGGACGTGAG CCAGGCCTCACCCAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 611 LAIR1ex +S1R aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKPRKWSEQ SDYLELLVK 612 LAIR1ex +S1R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACTCCGACACAGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCTTACAGATG CATCTACTATAAGCCAAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 613 LAIR1ex +S1S2R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY aa SDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKSRKWSEQ SDYLELLVK 614 LAIR1 ex +S1S2R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACTCCGACACAGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCCGGCCCATACAGATG CATCTACTATAAGAGCAGAAAATGGTCAGAGCAGAGCGA TTATCTGGAACTGCTGGTGAAG 615 LAIR1ex +S1T aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY SDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSEQ SDYLELLVK 616 LAIR1ex +S1T GAGGACCTGCCAAGACCCAGCATCTCCGCCGAACCTGG nucl GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACTCCGACACAGAGGACGTGAG CCAGACCTCACCCAGCGAGTCCGAAGCCCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAACGCTGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 617 LAIR1ex +S2 aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKSPKWSE QSDYLELLVK 618 LAIR1ex +S2 nucl GAGGACCTGCCCAGACCTAGCATCTCCGCAGAACCAGG GACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACAACGACACAGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCTTACAGATG CATCTACTATAAGTCTCCAAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 619 LAIR1ex +S2R aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY NDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIYYKSRKWSE QSDYLELLVK 620 LAIR1ex +S2R GAGGACCTGCCCCGCCCTAGCATCTCCGCAGAACCAGG nucl GACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACAACGACACAGAGGACGTGAG CCAGGCCTCACCTAGCGAGTCCGAAGCTCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCCGGCCCATACAGATG CATCTACTATAAGTCTAGAAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 621 LAIRIex +T aa EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY NDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKPPKWSE QSDYLELLVK 622 LAIR1ex +T nucl GAGGACCTGCCAAGACCCAGCATCTCCGCCGAACCTGG GACTGTGATTCCACTGGGCTCCCACGTGACCTTCGTCTGC AGAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCG CGAATCTCGAAGTACCTACAACGACACAGAGGACGTGAG CCAGACCTCACCCAGCGAGTCCGAAGCCCGGTTCAGAAT CGACTCTGTCAGTGAAGGAAATGCTGGCCCTTACAGATG CATCTACTATAAGCCCCCTAAATGGTCAGAGCAGAGCGAT TATCTGGAACTGCTGGTGAAG 623 LAIR1ex +TS2R EDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERESRSTY aa NDTEDVSQTSPSESEARFRIDSVSEGNAGPYRCIYYKSRKWSE QSDYLELLVK 624 LAIR1 ex +TS2R GAGGACCTGCCTAGACCTAGCATCTCCGCCGAACCAGGG nucl ACTGTGATTCCCCTGGGCTCCCACGTGACCTTCGTCTGCA GAGGCCCCGTGGGAGTCCAGACCTTCCGGCTGGAGCGC GAATCTCGAAGTACCTACAACGACACAGAGGACGTGAGC CAGACCTCACCTAGCGAGTCCGAAGCCCGGTTCAGAATC GACTCTGTCAGTGAAGGAAATGCTGGCCCATACAGATGC ATCTACTATAAGTCTAGAAAATGGTCAGAGCAGAGCGATT ATCTGGAACTGCTGGTGAAG
[0337] The 20 fusion proteins were expressed in HEK293 cells and the binding to P. falciparum was assessed by staining IEs, as described in Example 1. The results are shown in
Example 10: Influence of the Mutations of LAIR1 Fragment on Binding to Collagen
[0338] Native human LAIR-1 is well-known to bind collagen, in particular via its extracellular domain (T. Harma C. Brondijk, Talitha de Ruiter, Joost Ballering, Hans Wienk, Robert Jan Lebbink, Hugo van Ingen, Rolf Boelens, Richard W. Farndale, Linde Meyaard, and Eric G. Huizinga (2010): Crystal structure and collagen-binding site of immune inhibitory receptor LAIR-1: unexpected implications for collagen binding by platelet receptor GPVI. Blood 115:7). To identify whether the five mutations influence binding to collagen, the 20 fusion proteins of Example 9 were expressed in HEK293 cells and the binding to collagen was assessed by ELISA. Briefly ELISA plates were coated with Collagen type 1, blocked with PBS 1% BSA, followed by incubation with supernatants and a secondary-anti-human (Fc-specific) antibody for detection. The results are shown in
Example 11: Identification of the P. falciparum Antigen(s) Recognized by MGD21
[0339] To identify the antigen(s) recognized by the LAIR1-containing antibodies, stable P. falciparum 3D7 lines, which were enriched (3D7-MGD21.sup.+) or depleted (3D7-MGD21.sup.) of MGD21 reactivity were generated.
[0340] To investigate MGD21 binding to erythrocyte ghosts and MGD21 immunoprecipitates (IP) prepared from 3D7-MGD21.sup.+ and 3D7-MGD21.sup. IEs, a western blot was performed. Controls included uninfected erythrocytes (uEs) and immunoprecipitates with an irrelevant antibody (BKC3). Anti-human IgG was used as the secondary antibody, resulting in detection of antibodies used for immunoprecipitation alongside antigens of interest. As shown in
[0341] Next, analysis of the MGD21 immunoprecipitates by liquid chromatography coupled with mass spectrometry (LC-MS) was performed. As shown in
[0342] In the next step, recognition of 3D7-MGD21.sup.+ IEs and 3D7-MGD21.sup. IEs by other broadly reactive antibodies from donors C (MGC1, MGC2, MGC4, MGC5, MGC17, MGC26, MGC28, MGC29, MGC34) and D (MGD21, MGD39, MGD47, MGD55) were investigated. BKC3 was used as negative control antibody. As shown in
[0343] The binding of the LAIR1-containing antibodies to specific RIFINs was determined by use of CHO cells transfected with PF3D7_1400600 and PF3D7_1040300, PF3D7_0100400, PF3D7_0100200 and PF3D7_1100500. As shown in
[0344] Furthermore, CHO cells were transfected with a specific (PF3D7_1400600) or an irrelevant (PF3D7_0100200) RIFIN as well as with a RIFIN chimaera containing the constant region of PF3D7_0100200 and the variable region of PF3D7_1400600 and a RIFIN chimaera containing the constant region of PF3D7_1400600 and the variable region of PF3D7_0100200. MGD21 and an Fc fusion protein containing the MGD21 LAIR1 domain stained only those CHO cells, which were transfected with the specific RIFIN PF3D7_1400600 or with the RIFIN chimaera containing the constant region of PF3D7_0100200 and the variable region of PF3D7_1400600, but not cells transfected with the inverse chimaera. Results are shown in
[0345] Collectively, the results obtained in Example 11 indicate that the LAIR1-containing antibodies recognize specific members of the RIFIN family in different P. falciparum isolates.
[0346] In particular, these results identify RIFIN PF3D7_1400600 (amino acid sequence according to SEQ ID NO: 536, nucleotide sequence according to SEQ ID NO: 537) as one major target of the mutated LAIR-1 fragment in P. falciparum and RIFIN PF3D7_1040300 (amino acid sequence according to SEQ ID NO: 538, nucleotide sequence according to SEQ ID NO: 539) as another target of the mutated LAIR-1 fragment in P. falciparum.
[0347] Since RIFINs are highly polymorphic in different strains and the mutated LAIR-1 fragment according to the present invention binds to erythrocytes infected by different P. falciparum strains, it is anticipated that the mutated LAIR-1 fragment according to the present invention will recognize additional RIFINs.