PHOTOSYNTHETIC MICROALGAE AND USE THEREOF FOR HYDROGEN PRODUCTION
20250043234 ยท 2025-02-06
Inventors
- Iftach YACOBY (Tel Aviv, IL)
- Tamar ELMAN (Tel Aviv, IL)
- Oren BEN ZVI (Tel Aviv, IL)
- Chris Philip SCHWIER (Munster, DE)
- Thi Thu Hoai HO (Munster, DE)
- Michael HIPPLER (Munster, DE)
Cpc classification
International classification
Abstract
The present invention is in the field of molecular hydrogen (H.sub.2) bio-production, particularly, the present invention provides genetically modified photosynthetic microalgae producing hydrogen in complete growth medium under ambient, continuous growth conditions at cost-effective amounts and to a process for hydrogen production using genetically modified photosynthetic microalga.
Claims
1-43. (canceled)
44. A genetically modified photosynthetic microalga having reduced expression and/or activity of Proton Gradient Regulation 5 (PGR5) and Light Harvesting Complex Protein 2 (LHCA2) compared to the expression and/or activity of PGR5 and LHCA2 in a corresponding unmodified photosynthetic microalga.
45. The genetically modified photosynthetic microalga of claim 44, wherein said microalga, when cultured under growth conditions comprising a complete medium, is capable of producing hydrogen at a production rate of at least 50 mole H.sub.2 per mg chlorophyll of said microalgae per hour.
46. The genetically modified photosynthetic microalga of claim 45, wherein said microalgae maintain the production rate for a time period of at least 5 days.
47. The genetically modified photosynthetic microalga of claim 45, wherein the growth conditions comprise culturing said photosynthetic microalga in the dark for a time period of from about 1 hour to about 10 hours thereafter exposing the microalgae to photosynthetic light.
48. The genetically modified photosynthetic microalga of claim 47, wherein the photosynthetic light is selected from the group consisting of a continuous light at an intensity of from about 50 E to about 600 E and a pulsed light applied in cycles consisting of 1-20 msec of light followed by 100-500 msec of dark.
49. The genetically modified photosynthetic microalga of claim 45, wherein the growth conditions comprise culturing said photosynthetic microalga under ambient air.
50. The genetically modified photosynthetic microalga of claim 44, wherein the LHCA2 comprises an amino acid sequence having at least 85% identity to the amino acid sequence set forth in SEQ ID NO: 1 and wherein the PGR5 comprises an amino acid sequence having at least 65% identity to the amino acid sequence set forth in SEQ ID NO:3.
51. The genetically modified photosynthetic microalga of claim 44, wherein the expression and/or activity of each of the PGR5 protein and LHCA2 is reduced by at least 25% compared to the expression of said PGR5 and LHCA2 in the corresponding unmodified photosynthetic microalga.
52. The genetically modified photosynthetic microalga of claim 44, wherein said microalga comprises LHCA2 encoding gene and PGR5 encoding gene, each comprising at least one mutation, wherein the mutation results in reduced expression and/or activity of the encoded LHCA2 and PGR5.
53. The genetically modified photosynthetic microalga of claim 44, wherein said photosynthetic microalga is capable of expressing an endogenous hydrogenase.
54. The genetically modified photosynthetic microalga of claim 44, wherein said photosynthetic microalga is further genetically modified to comprise hydrogenase synthetic operon comprising hydrogenase-assembly proteins.
55. The genetically modified photosynthetic microalga of claim 44, wherein said microalga is of the family Chlamydomonadaceae.
56. A process for bio-production of hydrogen, the process comprising (i) culturing genetically modified photosynthetic microalgae selected from the group consisting of microalgae having reduced expression and/or activity of PGR5 and microalgae having reduced expression and/or activity of PGR5 and LHCA2 in a complete medium under ambient air and exposure to dark period followed by exposure to light, wherein the light is at intensity enabling photosynthesis; and (ii) collecting hydrogen produced by the genetically modified photosynthetic microalgae.
57. The process of claim 56, wherein the dark period is from about 1 hour to about 10 hours.
58. The process of claim 56, wherein the photosynthetic light is selected from the group consisting of a continuous light at an intensity of from about 50 E to about 600 E and a pulsed light applied in cycles consisting of 1-20 msec of light followed by 100-500 msec of dark.
59. The process of claim 56, wherein the genetically modified photosynthetic microalgae produce at least 10 mole H.sub.2 per mg chlorophyll of said microalgae per hour.
60. The process of claim 56, wherein the genetically modified photosynthetic microalgae are continuously grown in a single culture vessel.
61. The process of claim 56, wherein the genetically modified microalga has a reduced expression and/or activity of PGR5 or of PGR5 and LHCA2.
62. The process of claim 56, wherein the polynucleotide encoding the LHCA2 and/or the polynucleotide encoding PGR5 comprises at least one mutation.
63. The process of claim 56, wherein the genetically modified photosynthetic microalgae are of the family Chlamydomonadaceae.
Description
BRIEF DESCRIPTION OF THE FIGURES
[0058]
[0059]
[0060]
[0061]
[0062]
[0063]
[0064]
[0065]
[0066]
[0067]
[0068]
[0069]
DETAILED DESCRIPTION OF THE INVENTION
[0070] BioH.sub.2 research is primarily converged into genetic manipulation and/or external engineering to effectuate the potential of H.sub.2 production from microalgae. However, beyond a proof of concept by laboratory findings, transition to the industrial scales and demands must be made.
[0071] The present invention provides means and methods for bio-production of hydrogen in a continuous, cost-effective manner at amounts hitherto not reachable under large-scale manufacturing conditions. Specifically, the present invention provides genetically modified photosynthetic microalgae, particularly of the family Chlamydomonadaceae, the modification comprises reduced expression and/or activity of LHCA2 and PGR5. The present invention further discloses a process for H.sub.2 bio-production comprising culturing the genetically modified photosynthetic microalgae of the invention, as well as a single PGR5 mutant under dark period followed by normal photosynthetic growth conditions that do not require nutrient deprivation, such that no steps of mass collection and medium replacement are required, nor growth under oxygen-deprived (anoxia) conditions.
Definitions
[0072] As used herein, the terms comprising and including or grammatical variants thereof are to be taken as specifying inclusion of the stated features, integers, actions or components without precluding the addition of one or more additional features, integers, actions, components or groups thereof. This term is broader than, and includes the terms consisting of and consisting essentially of as defined by the Manual of Patent Examination Procedure of the United States Patent and Trademark Office. Thus, any recitation that an embodiment includes or comprises a feature is a specific statement for sub embodiments consist essentially of and/or consist of the recited feature.
[0073] The term about as used herein refers to 10%.
[0074] The term gene refers to a nucleic acid (e.g., DNA or RNA) sequence that comprises coding sequences necessary for the production of RNA or a polypeptide. A polypeptide can be encoded by a full-length coding sequence or by any part thereof. The term parts thereof when used in reference to a gene refers to fragments of that gene. The fragments may range in size from a few nucleotides to the entire gene sequence minus one nucleotide. Thus, a nucleic acid sequence comprising at least a part of a gene may comprise fragments of the gene or the entire gene.
[0075] The term gene also encompasses the coding regions of a structural gene and includes sequences located adjacent to the coding region on both the 5 and 3 ends for a distance of about 1 kb on either end such that the gene corresponds to the length of the full-length mRNA. The sequences which are located 5 of the coding region, and which are present on the mRNA, are referred to as 5 non-translated sequences. The sequences which are located 3 or downstream of the coding region, and which are present on the mRNA, are referred to as 3 non-translated sequences.
[0076] The terms polynucleotide, polynucleotide sequence, nucleic acid sequence, and isolated polynucleotide are used interchangeably herein. These terms encompass isolated nucleotide sequences and the like. A polynucleotide may be a polymer of RNA or DNA or a hybrid thereof, that is single- or double-stranded, linear or branched, and that optionally contains synthetic, non-natural or altered nucleotide bases. The terms also encompass RNA/DNA hybrids.
[0077] As used herein, sequence identity or identity in the context of two nucleic acid or amino acid sequences includes reference to the residues in the two sequences which are the same when aligned. When percentage of sequence identity is used in reference to proteins it is recognized that residue positions which are not identical often differ by conservative amino acid substitutions, where amino acid residues are substituted for other amino acid residues with similar chemical properties (e.g., charge or hydrophobicity) and therefore do not change the functional properties of the molecule. Where sequences differ in conservative substitutions, the percent sequence identity may be adjusted upwards to correct for the conservative nature of the substitution. Sequences which differ by such conservative substitutions are considered to have sequence similarity or similarity. Means for making this adjustment are well-known to those of skill in the art. Typically this involves scoring a conservative substitution as a partial rather than a full mismatch, thereby increasing the percentage sequence identity. Thus, for example, where an identical amino acid is given a score of 1 and a non-conservative substitution is given a score of zero, a conservative substitution is given a score between zero and 1. The scoring of conservative substitutions is calculated, e.g., according to the algorithm of (Henikoff and Henikoff 1992).
[0078] Identity (e.g., percent homology) can be determined using any homology comparison software, including for example, the BlastN software of the National Center of Biotechnology Information (NCBI) such as by using default parameters.
[0079] According to some embodiments of the invention, the identity is a global identity, i.e., an identity over the entire amino acid or nucleic acid sequences of the invention and not over portions thereof.
[0080] The terms hydrogen molecular hydrogen and H.sub.2 are used herein interchangeably and refer to the diatomic gas H.sub.2.
[0081] The term photosynthetic microalga or its plurality photosynthetic microalgae are used herein in their broadest scope and refer to unicellular microscopic eukaryotic algae capable of performing photosynthesis, typically found in freshwater and marine systems. Depending on the species, the microalgae size can range from a few micrometers (m) to a few hundreds of micrometers. According to certain embodiments, the photosynthetic microalga or microalgae comprise at least one active hydrogenase. According to certain exemplary embodiments, the photosynthetic microalga or microalgae are of the family Chlamydomonadaceae, particularly a genetically modified Chlamydomonas reinhardtii.
[0082] As used herein, the term corresponding when used in regard to two or more photosynthetic microalga refer to microalga of the same species and of the same genetic background. According to certain embodiments of the present invention, corresponding photosynthetic microalgae differ in the expression of at least one protein and/or the polynucleotide encoding same. According to certain embodiments, the corresponding photosynthetic microalgae of the present invention differ in the expression of PGR5 and/or LHCA2 and/or the polynucleotides encoding same, wherein the unmodified microalga expresses unmodified, wilt type PGR5 and/or LHCA2.
[0083] The terms Proton Gradient Regulation 5 and PGR5 are used herein interchangeably and refer to a chloroplast protein involved in the regulation of the cyclic electron flow (CEF) around Photosystem I. It is essential for the reduction of PGRL1A by ferredoxin and for photoprotection. In a study of Chlamydomonas reinhardtii ATPase pgr5 and rbcL pgr5 mutants it was shown to regulate cyclic electron flow under ATP- or Redox-limited conditions. (Johnson X. et al., 2014. Plant Physiol. 165, 438-452). The term further refers to the gene or parts thereof encoding the protein. The pgr5 mutation in the genetically modified algae used according to the teachings of the invention was generated by insertional mutagenesis as described in Johnson et al. (2014, ibid). According to certain embodiments, Chlamydomonas PGR5 (Cre05.g242400.t1.2) comprises the amino acid sequence set forth in SEQ ID NO:3 encoded by a polynucleotide comprising the nucleic acid sequence set forth in SEQ ID NO:4.
[0084] The term Light Harvesting Protein 2 (LHC2) refers to a peripheral antenna of PSI protein which together with LHCA9 is located to the opposite side of the LHCA belt. It was shown by Steinbeck et al. (Steinbeck J et al 2018. Proc Natl Acad Sci USA 115:10517-10522. DOI: 10.1073/pnas. 1809973115) that detachment of LHC2 is a prerequisite for formation of a PSI-Cytbof super-complex. According to certain embodiments, Chlamydomonas LHC2 (Cre12.g508750.t1.2) comprises the amino acid sequence set forth in SEQ ID NO:1 encoded by a polynucleotide comprising the nucleic acid sequence set forth in SEQ ID NO:2.
[0085] The lhca2 mutant, designated as lhca2 LMJ.RY 0402109691, is derived from the Chlamydomonas CiLP library as described in Li et al. (Li X et al., 2016. Plant Cell 28, 367-387) and contains a DNA insertion in the second intron of the lhca2 nuclear gene. The double-mutant alga of the invention (pgr5/lhca2) was generated by crossing the single mutant pgr5 C. reinhardtii with the single mutant lhca2 C. reinhardtii and further backcrosses as described in the Example section hereinbelow.
[0086] As used herein, the expression and/or activity of PGR5 and/or LHCA2 according to the teaching of the invention is reduced or inhibited or down regulated or knocked out or knocked down if the level of the proteins or the polynucleotides encoding same, or the measured activity of the protein(s) is reduced by at least 30% compared to the level in a corresponding wild type photosynthetic microalga. According to certain embodiments, the level of the protein(s), the polynucleotide(s) encoding same or the protein(s) activity is reduced by at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90% at least 95%, and more. According to some embodiments, the term reduced expression refers to undetectable amounts of the polynucleotide ending the protein. According to some embodiments, the term reduced expression and/or activity refers to 100% inhibition or loss of function or null function protein.
[0087] As used herein, the terms ambient air or ambient air conditions with reference to the growth conditions of the photosynthetic microalgae of the invention refer to natural atmospheric air or to air comprising the gas composition of atmospheric air under which the microalgae are grown. By volume, dry air contains 78.09% nitrogen, 20.95% oxygen, 0.93% argon, 0.04% carbon dioxide, and small amounts of other gases.
[0088] As used herein, the terms complete and replete with reference to a medium refers to medium suitable for mixotrophic culturing of photosynthetic microalgae comprising all the macro and micro nutrients which are needed for any plant/algae growth. The medium can be a liquid, porous polymeric matrices (e.g., alginate and nanocellulose), thin gels (agar) and the like. According to certain exemplary embodiments, Tris-Acetate buffer (TPA) is used as a complete medium.
[0089] The units mol photons m.sup.2 s.sup.1 and Em.sup.2 s.sup.1 are used herein interchangeably to describe light intensity.
[0090] According to certain aspects, the present invention provides a genetically modified photosynthetic microalga having reduced expression and/or activity of PGR5 and LHCA2 compared to the expression and/or activity of PGR5 and LHCA2 in a corresponding unmodified photosynthetic microalga.
[0091] According to certain embodiments, the genetically modified photosynthetic microalgae is capable of producing hydrogen at an amount at least 100-fold higher compared to the hydrogen production of the corresponding unmodified microalgae grown under the same growth conditions. According to certain aspects, the present invention provides a process for bio-production of hydrogen, the process comprising (i) culturing genetically modified photosynthetic microalgae selected from the group consisting of microalgae having reduced expression and/or activity of PGR5 and microalgae having reduced expression and/or activity of PGR5 and LHCA2 in a complete medium under ambient air and exposure to dark period followed by exposure to light, wherein the light is at intensity enabling photosynthesis; and (ii) collecting hydrogen produced by the genetically modified photosynthetic microalgae.
[0092] According to certain embodiments, the genetically modified photosynthetic microalgae has reduced expression of a PGR5 encoding polynucleotide and/or reduced expression and/or activity of the encoded PGR5.
[0093] According to certain embodiments, the genetically modified photosynthetic microalgae has reduced expression of am LHCA2 encoding polynucleotide and/or reduced expression and/or activity of the encoded According to certain embodiments, the genetically modified photosynthetic microalgae has reduced expression of a PGR5 encoding polynucleotide and/or reduced expression and/or activity of the encoded PGR5.
[0094] Two major challenges limit efficient biological H.sub.2 production. The first challenge is to overcome the inactivation of the hydrogenase enzyme, which serves as a hydrogen production catalyst, by molecular oxygen (O.sub.2) produced during photosynthesis. The second challenge is to overcome the limited electron flow from the photosynthetic apparatus to the hydrogenase enzyme.
[0095] In order to engineer photosynthetic electron-transfer in the green alga Chlamydomonas reinhardtii for improvement of H.sub.2 production, an increased respiration in the pgr5 mutant served as a starting point. The pgr5 mutant exhibits increased respiration due to a shortage in ATP production in the chloroplast, which signals the mitochondria to operate intensively. ATP shortage in the chloroplast allows not only maintaining a local anoxia under ambient conditions, but it also suppresses the main competitor of the H.sub.2 production process, CO.sub.2 fixation via the Calvin cycle. However, while photosynthetic microalgae genetically modified to have reduced activity of PGR5 produce significantly higher H.sub.2 amounts compared to corresponding unmodified microalgae, a further increase in the H.sub.2 amounts is desired for a more cost-effective large-scale production.
[0096] In order to further enhance the electron flow to H.sub.2 production, formation of a super-complex containing key components of the photosynthetic electron transfer chain: photosystem I (PSI), cytochrome b.sub.6f and FNR (PSI-Cytb.sub.6f-FNR super-complex) and/or PSI dimer was attempted. Without wishing to be bound by any specific theory or mechanism of action, these super-complexes may allow cyclic electron flow (CEF) around PSI and might be involved in partitioning of electrons at the acceptor side of PSI, and thus being involved in the boost of total electron output and improved H.sub.2 production. It has been suggested that unbinding of LHCA2 and LHCA9 is required for PSI-Cytbof super-complex formation (Steinbeck J et al 2018, ibid). Recently, is has indicate that the absence of LHCA2 could also lead to the formation of PSI-dimers (Naschberger A et al., 2021 bioRxiv preprint doi: https://doi.org/10.1101/2021.08.30.458224).
[0097] In order to test genetic interaction between pgr5 and lhca2, the pgr5 and lhca2 mutant strains were crossed to produce the pgr5/lhca2 double mutant of the invention, designated herein Chlamydomonas elsa. The C. elsa addressed both challenges described above, being capable of fast and efficient H.sub.2 production for periods exceeding 14 days. Furthermore, C. elsa is robust and performs well at temperatures up to 35 C.-36 C. and/or under high light intensity of 250 E to 600 E. Thus, the single (pgr5) mutant strain and the double (pgr5 and lhca2) mutant strain of the invention offer an alternate strategy for hydrogen production. The alternative strategy enables use of sunlight and abundant resources (e.g., uncultivated soil, wastewater or seawater) and accordingly reduces competition with agricultural resources. Alternatively, or additionally, the native replication rate of photosynthetic microalgae, particularly of the family Chlamydomonadaceae, allows rapid and cost-effective implementation of solar bio-factories producing H.sub.2.
[0098] According to certain embodiments, the LHCA2 comprises an amino acid sequence having at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% identity to the amino acid sequence set forth in SEQ ID NO:1. Each possibility represents a separate embodiment of the present invention.
[0099] According to certain embodiments, the LHCA2 is encoded by LHCA2 having a nucleic acid sequence having at least at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, 95%, at least 96%, at least at least 97%, at least 98%, at least 99% or 100% identity to the nucleic acid sequence set forth in SEQ ID NO:2. Each possibility represents a separate embodiment of the present invention.
[0100] According to certain embodiments, the PGR5 comprises an amino acid sequence having at least 65%, at least 70%, at least 80%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% identity to the amino acid sequence set forth in SEQ ID NO:3. Each possibility represents a separate embodiment of the present invention.
[0101] According to certain embodiments, the PGR5 is encoded by PGR5 having a nucleic acid sequence having at least 65%, at least 70%, at least 80%, at least 85%, at least 86%, at least 87%, at least 88%, at least 89%, at least 90%, at least 91%, at least 92%, at least 93%, at least 94%, at least 95%, at least 96%, at least 97%, at least 98%, at least 99% or 100% identity to the nucleic acid sequence set forth in SEQ ID NO:4. Each possibility represents a separate embodiment of the present invention.
[0102] According to certain embodiments, the genetically modified photosynthetic microalga is selected from any green microalgae which expresses hydrogenase, particularly [FeFe]-hydrogenase. According to certain embodiments, the green microalga naturally expresses the hydrogenase. According to certain alternative embodiments, the green microalga is genetically modified to comprises within the nucleus or the chloroplast at least one polynucleotide encoding hydrogenase synthetic operon comprising hydrogenase-assembly proteins. According to certain embodiments, the polynucleotide encodes a hydrogenase operon of a eukaryotic origin. According to these embodiments, the hydrogenase-assembly proteins comprise a HydEF protein having at least 50% identity to HydEF UniProtKB Accession No. Q6PSL5 and HydG to having at least 50% identity to HydG UniProtKB Accession No. Q6PSL4. According to certain embodiments, the polynucleotide encodes a hydrogenase operon of a prokaryotic origin. According to these embodiments, the hydrogenase-assembly proteins comprise a HydE protein having at least 50% identity to HydE UniProtKB Accession No. A0A7Y9AEX4; HydF protein having at least 50% identity to HydF UniProtKB Accession No. A0A7X1AEP6; and HydG to having at least 50% identity to HydG UniProtKB Accession No. A0A7Y9AFT2.
[0103] According to certain embodiments, the expression and/or activity of the LHCA2 and/or of the PGR5 is reduced by at least 25%, at least 30%, at least 35%, at least 40%, at least 45%, at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75% at least 80% at least 85% at least 86% at least 87% at least 88% at least 89% at least 90% at least 91% at least 92% at least 93% at least 94% at least 95% at least 96% at least 97% at least 98% at least 99% or more compared to said LHCA2 and/or PGR5 expression and/or activity in a corresponding unmodified photosynthetic microalga. Each possibility represents a separate embodiment of the present invention.
[0104] According to certain embodiments the expression and/or activity of the LHCA2 and/or the PGR5 is reduced to obtain null function protein.
[0105] Down-regulation or inhibition of LHAC2 and/or PGR5 expression can be affected at the genomic and/or the transcript level by mutations (including deletions, insertions, site specific mutations including nucleotide substitution and the like, as long as the mutation(s) result in down-regulation of the gene expression or in the production of less-functional or non-functional protein); using a variety of molecules that interfere with transcription and/or translation (e.g., antisense, siRNA, Ribozyme, or DNAzyme); or at the protein level using, e.g., antagonists, enzymes that cleave the polypeptide, and the like.
[0106] According to certain exemplary embodiments, down-regulation or inhibition of LHAC2 and/or PGR5 expression is affected by mutagenesis. Any method for mutagenesis as is known in the art can be used according to the teachings of the present invention including chemical mutagenesis, radio-mutagenesis and site directed mutagenesis, for example using genome editing techniques.
[0107] According to certain exemplary embodiments, the pgr5 mutation may be generated by DNA insertional mutagenesis as described, for example, in Dent et al., 2005 (Dent R M et al., 2005. Plant Physiol 137, 545-556) with linearized pBC1 plasmid encoding paromomycin resistance as described in Tran et al., 2012 (Tran PT, 2012. PLOS ONE 7: e42196).
[0108] According to certain exemplary embodiments, the lhca2 mutation is derived from the Chlamydomonas CiLP library as described in Li et al. (Li X et al., 2016. ibid and contains a DNA insertion in the second intron of the lhca2 nuclear gene.
[0109] The growth conditions required for supporting the significant H.sub.2 production by the double mutant lhca2/pgr5 of the present invention, as well as by the single mutant pgr5, although to a lower extent, according to the process of the present are adequate for large-scale production and typically require photobioreactors and common microalgae culture medium.
[0110] According to certain embodiments, the growth conditions comprise growing the photosynthetic microalgae in a complete (non-starvation) growth medium under ambient air in the dark and thereafter exposing the microalgae culture to light at an intensity enabling photosynthesis.
[0111] According to certain embodiments, the photosynthetic microalgae are grown in the dark for a period of from about 1 h to about 10 h. According to certain embodiments, the photosynthetic microalgae are grown in the dark for a period of from about 1 h to about 9 h, from about 1 h to about 8 h, from about 1 h to about 7 h, from about 1 h to about 6 h, from about 1 h to about 5 h, from about 1 h to about 4 h, from about 1 h to about 3 h, or from about 1 h to about 2 h. Each possibility represents a separate embodiment of the present invention.
[0112] According to certain exemplary embodiments, photosynthetic microalgae are grown in the dark for two hours.
[0113] According to certain embodiments, the light enabling photosynthesis to which the microalgae are exposed after the dark period is a continuous light. According to these embodiments, the intensity of the continuous photosynthetic light is in the range of from about 10 E to about 10,000 E (5 times full sun light). According to certain embodiments, the intensity of the continuous photosynthetic light is in the range of from about 10 E to about 5000 E, or from about 10 E to about 1000 E. Each possibility represents a separate embodiment of the present invention. According to certain exemplary embodiments, the continuous light intensity is in the range of from about 50 E to about 600 E.
[0114] According to certain embodiments, the light enabling photosynthesis to which the microalgae are exposed after the dark period is applied in pulses (pulsed light). According to certain embodiments, the pulsed photosynthetic light is applied in cycles consisting of 1-20 msec of light followed by 100-500 msec dark. According to certain embodiments, the intensity of the pulsed light is above 500 E and up to 10,000 E. According to certain embodiments, the intensity of the pulsed light is above 500 E, the intensity of the pulsed light is above 1000 E, above 1500 E, or above 2000 E. Each possibility represents a separate embodiment of the present invention. According to certain exemplary embodiments, the intensity of the pulsed light is about 2,500 E.
[0115] According to certain embodiments, the genetically modified photosynthetic microalgae is capable of producing at least 10, at least 15, at least 20, at least 25, at least 60 or more mol H.sub.2 per mg chlorophyll of said microalgae per hour.
[0116] According to certain embodiments, the genetically modified photosynthetic microalgae is capable of continuously producing at least 10 mol, at least 15 mol, at least 20 mol, at least 25 mol, at least 30 mol, at least 35 mol, at least 40 mol, at least 45 mol, or at least 50 mol, or at least 50 mol H.sub.2/mg Chlh for at least 5 days, at least 10 days, at least 15 days or at least 20 days under photosynthetic light conditions according to the process of the invention. Each possibility represents a separate embodiment of the present invention.
[0117] According to certain embodiments, the genetically modified photosynthetic microalgae is of the family Chlamydomonadaceae.
[0118] According to certain exemplary embodiments, the genetically modified photosynthetic microalga is Chlamydomonas reinhardtii. According to certain exemplary embodiments, the genetic background of the genetically modified C. reinhardtii is of a cc124/125 strain.
[0119] The following examples are presented in order to more fully illustrate some embodiments of the invention. They should, in no way be construed, however, as limiting the broad scope of the invention. One skilled in the art can readily devise many variations and modifications of the principles disclosed herein without departing from the scope of the invention.
EXAMPLES
Methods
Cell Growth and Conditions
[0120] In BioH.sub.2 research, as in other fields, laboratory findings may fail to extrapolate into large-scale use, and in the case of microalgae, into agriculture/industrial set-ups. This challenge is heightened for photosynthetic products, since many different variables like culture density and light permeability can dramatically affect productivity and consequently, ultimately fail in the commercial production phase. Accordingly, the experiments of the present invention have been conducted directly on a large measurement system, a 1-L photobioreactor (PBR, BlueSens) with built-in probes for the analysis of various parameters such as O.sub.2 and H.sub.2 concentration, gas output, culture pH and optical density.
[0121] Mutant and control Chlamydomonas strains were cultivated in replete Tris-Acetate (TAP) medium, kept in Erlenmeyer flasks at constant stirring, under irradiation of 60 HE m.sup.2 s.sup.1 at 24 C. For experimental procedures, cells were diluted to a fresh TAP medium to reach the next day's cultures at early log phase (2-5 g Chl ml.sup.1). Chlorophyll was extracted and determined according to Jeffery and Humphrey (Jeffrey, S. W. & Humphrey, G. F. Biochem. und Physiol. der Pflanz. 167, 191-194, 1975). The cell starter was transferred to grow in 1-L TAP medium to reach a chlorophyll concentration of 10 g/ml and then transferred into 1-L BlueSens PBR. Each bioreactor was supplemented with 1 ml acetic acid (16.7 M) and tittered to the desired pH using NaOH. The bioreactors were placed on a Digital Hot-Plate Stirrer (Witeg) and kept at 30 C. with constant stirring of 800 rpm. Dark/light regime was applied as described below. The percentages of O.sub.2 and H.sub.2 in the bioreactor's headspace were measured using thermal conductivity (TCD) sensors (BCP, BlueSens gas sensor GmbH), and H.sub.2 gas (ml) output was monitored using Blue Vcount gas counters (BlueSens).
Mass Inlet Membrane Spectroscopy (MIMS) Analysis for H.sub.2 or CO.sub.2 Exchange
[0122] MIMS analysis was performed as described in Liran Et al. (Liran, O. et al. Plant Physiol. 172, 264-271, 2016). For H.sub.2 or CO.sub.2 measurements, 5 ml of 15 or 45 g Chl/ml in TAP supplemented with (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid) (HEPES) (50 mM) cells were placed in a cuvette and fitted into a metabolic chamber (Optical unit ED-101US/MD, Walz). Following 2 or 1 hr dark incubation, the cells were exposed to 370 or 2500 E m.sup.2 s.sup.1 of a red actinic light using a Dual-Pulse Amplitude Modulated Fluorometer (DUAL-PAM-100; Heinz Walz Gmbh, Effeltrich, Germany). If stated, DCMU (200 M, Merck S279013) or hydroxylamine (HA, 1 mM) were added 10 min before light exposure. Masses were detected using a 0.5 second dwelling time per mass. Based on a standard curve described in Liran et al. (ibid), conversion factors were applied to normalize H.sub.2 and CO.sub.2 traces.
Measurements of Photosynthetic Electron Transfer Rates (ETR)
[0123] For determining the ETR, the electrochromic shift (ECS) signals were measured using a Joliot-type spectrophotometer (JTS-10, Biologic). In brief, all absorption changes were normalized to the ECS I/I signal (520-nm-546-nm) produced after a saturating laser flash in the presence of 1 mM hydroxylamine (HA) and 10 M 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU). Thus, the flash-induced rapid ECS describes the density of active PSI centers in PSII-inhibited HA/DCMU samples (measured as 1 charge separation.Math.PSI.sup.1). The ECS was also deconvoluted using the dark pulse method (DIRK) (reviewed in Bailleul et al., 2010. Photosynthesis Research 106, 179-189; Joliot and Joliot, 2002. Proc Natl Acad Sci USA 99, 10209-10214; and Nawrocki et al., 2019. Biochim Biophys Acta Bioenerg 1860, 425-432) and electron transfer rates were calculated. The ECS signal were induced by continued illumination was measured by DIRK measurement in band shift at absorption 520 nm and 546 nm. The first light phase 1 of DIRK in 10 s illumination period followed by 700 msec short dark-adapted and the second light phase 2 of DIRK during a 10 s illumination.
Example 1: Chlamydomonas Strains Used in the Study
[0124] Wild type (wt) Chlamydomonas strains are available from in the Chlamydomonas collection: chlamycollection.org. Wild type strain t222+ and cc124 were used as controls during the study of the present invention.
[0125] pgr5 mutant ( pgr5) was produced as previously described by an inventor of the present invention and co-workers (Johnson et al., 2014, ibid). The mutation is an insertion mutation. As is shown in
[0126] lhca2 mutant (lhca2) designated as lhca2 LMJ.RY 0402109691, is derived from the Chlamydomonas CiLP library as described in in Li et al. (2016. ibid). The mutation was inserted in the background of the strain cc4533.
[0127] pgr5/lhca2 mutant (pgr5/lhca2) designated as C. elsa, was produced via cross between pgr5 t222 and lhca2 cc4533.
[0128] In an independent experiment lhca2 and pgr5 single mutants described above were genetically backcrossed three times using WT cc124/cc125 cells. After successful backcrosses, a pgr5/lhca2 mutant was generated by additional rounds of genetic crossings. The mutant status was verified by mass spectrometry-based peptide and protein quantification (
Example 2: H.SUB.2 .Production Under Replete Medium Conditions by the pgr5/lhca2 Mutant
[0129] H.sub.2 production by the pgr5/lhca2 mutant (C. elsa) of the invention was tested under nutrient replete Tris-Acetate (TAP) and oxic growth conditions. A culture at a density of 10 mg chlorophyll per Liter was poured into 41 Liter photobioreactors (PBR, BlueSense) and the head space of the 4PBRs setup was sparged once with nitrogen for 1 minute. Then, the PBRs were kept in darkness for 2 hours after which irradiance was turned on at 400 E. The bioreactors were continuously monitored for gas concentration using H.sub.2 and O.sub.2 detectors while gas accumulation at the bioreactor headspace was recorded using a Ritter's gas volume analyzer. During the experiments, excess of H.sub.2 produced was released to the atmosphere Notably, while O.sub.2 accumulation is negligible due to enhanced respiration in the newly engineered pgr5/lhca2 mutant strain (C. elsa), H.sub.2 production started immediately after the onset of irradiation (
Example 3: H.SUB.2 .Production Under Replete Medium Conditions by the Por5 Mutant
[0130] H.sub.2 production by the C. reinhardtii single pgr5 mutant under an ambient mixotrophic setting was compared to the H.sub.2 production by its parental wt strain t222+ and to a rescue strain of pgr5 complemented with the wt copy of the gene that accumulates 100% of wt PGR5 levels (c1) (
[0131] To gain further insights on the kinetics of H.sub.2 production, the short-term accumulation of H.sub.2 in pgr5 was compared with t222+ and c1 using a membrane inlet mass spectrometer (MIMS) (
[0132] Like other mutants strains, pgr5 was isolated via random insertional mutagenesis to the nucleus, often resulting in unpredicted loci of multiple inserts, which could outcome with different phenotypes without direct causality between observable characteristics and one exact gene knockout. Therefore, the restoration of PGR5 expression in c1 (shown by mass-spectrometric (MS) analyses (
TABLE-US-00001 TABLE 1 Average H.sub.2 Production rates (mol H.sub.2 mg Chl.sup.1h.sup.1) per day Average H.sub.2 Production rates (mol H.sub.2 mg Chl.sup.1h.sup.1) per day Day Strain 1 2 3 4 5 6 pgr5 8.8 5.0 6.2 1.0 10.9 1.4 15.9 2.7 15.0 2.8 18.5 2.7 t222+ 1.7 0.2 1.6 0.4 2.1 0.3 3.0 0.7 3.1 0.8 1.7 0.7 c1 0.8 0.2 0.8 0.5 0.8 0.4 0.6 0.2 0.3 0.2 0 Average H.sub.2 Production rates (mol H.sub.2 mg Chl.sup.1h.sup.1) per day) Day Strain 7 8 9 10 11 12 pgr5 11.0 2.5 12.1 0.9 8.1 0.5 3.5 1.2 1.4 0.6 1.5 1.2 t222+ 0.8 0.5 0.2 0.1 0 0 0 0 c1 0 0 0 0 0 0
[0133] Average hydrogen production rates (mol H.sub.2 mg Chl.sup.1h.sup.1]) were calculated over 12 days and averaged per day. The rates were analyzed from the H.sub.2 gas accumulated in BlueSens bioreactors' headspace and measured by the BlueVCount gas counter. Mean values (n=4) and SE are shown.
Example 4: Comparison of H.SUB.2 .Production Under Replete Medium Conditions by the Single pgr5 Mutant and by the Double pgr5/lhca2 Mutant in a cc124 Genetic Background
[0134] To assess H.sub.2 production in pgr5 and pgr5/lhca2 production, O.sub.2 and H.sub.2 production as well as CO.sub.2 uptake under ambient conditions were measured using mass inlet mass spectrometry (MIMS) (
Example 5: Exemplary System for Producing H.SUB.2 .by the Photosynthetic Microalgae of the Invention
[0135]
Example 6: Uneven Light/Dark Pulses Inhibit Oxygen Accumulation Under Extreme Irradiance Up to 10,000 E (5 Times Full Sun Light)
[0136] H.sub.2 production by 5 ml of C. elsa, at a chlorophyl concentration of 10 mg per liter was measured under constant stirring within a measuring glass cuvette (
[0137] The foregoing description of the specific embodiments will so fully reveal the general nature of the invention that others can, by applying current knowledge, readily modify and/or adapt for various applications such specific embodiments without undue experimentation and without departing from the generic concept, and, therefore, such adaptations and modifications should and are intended to be comprehended within the meaning and range of equivalents of the disclosed embodiments. It is to be understood that the phraseology or terminology employed herein is for the purpose of description and not of limitation. The means, materials, and steps for carrying out various disclosed functions may take a variety of alternative forms without departing from the invention.