METASTASIS INHIBITING PROTEIN
20230121248 · 2023-04-20
Assignee
Inventors
Cpc classification
C07K14/705
CHEMISTRY; METALLURGY
C07K14/70596
CHEMISTRY; METALLURGY
C07K2319/74
CHEMISTRY; METALLURGY
International classification
Abstract
Protein compositions for the treatment of cancer that concomitantly reduce metastasis are disclosed. The proteins include three functional domains for targeting cancer cells, promoting tumor cell adhesion, and signaling to CAR-T cells. Methods of using and making the proteins are also disclosed.
Claims
1. A three-domain, fusion protein, comprising: a detection sequence that associates with cancer cells, a cell adhesion sequence, a signaling sequence configured to signal targeting of an anti-signaling CAR-T cell.
2. The fusion protein of claim 1, wherein the detection sequence identifies low pH of cancer cells and inserts the detection sequence into the cancer cell plasma membrane.
3. The fusion protein of claim 1, wherein the detection sequence corresponds to a pH-low-insertion peptide (pHLIP).
4. The fusion protein of claim 1, wherein the cell adhesion sequence is an IgSF protein.
5. The fusion protein of claim 1, wherein the cell adhesion sequence is selected from JAM-A, JAM-B, JAM-C, and JAM-4.
6. The fusion protein of claim 1, wherein the cell adhesion sequence is JAM-A.
7. The fusion protein of claim 1, wherein the cell adhesion sequence is CD19.
8. The fusion protein of claim 1, wherein the cell adhesion sequence increases tumor cell-tumor cell adhesion.
9. The fusion protein of claim 1, wherein the cell adhesion sequence increases tumor cell adhesion to cellular matrix.
10. The fusion protein of claim 1, further comprising a linking segment located between the cell adhesion sequence and the signaling sequence.
11. The fusion protein of claim 1, wherein the signaling sequence is an IgSF protein selected from CD19, CD22, CD133, Her-2, EGFR, and mesothelin.
12. The fusion protein of claim 1, wherein the signaling sequence is CD19.
13. The fusion protein of claim 1 which is selected from SEQ ID NO. 4, SEQ ID NO. 6, SEQ ID NO. 8, and SEQ ID NO. 10.
14. The fusion protein of claim 1 which is selected from SEQ ID NO. 4.
15. The fusion protein of claim 1 which is selected from SEQ ID NO. 6.
16. The fusion protein of claim 1 which is selected from SEQ ID NO. 8.
17. The fusion protein of claim 1 which is selected from SEQ ID NO. 10.
18. A system for treating cancer and reducing cancer metastasis comprising a fusion protein of claim 1, further comprising CAR-T cells configured to recognize the signaling sequence.
19. A method for treating cancer, comprising providing a therapeutically effective amount of a fusion protein of claim 1 to a patient in need thereof.
20. The method of claim 19, further comprising providing a therapeutically effective amount of CAR-T cells that recognize the signaling sequence and induce cancer cell death.
21. A method of manufacturing a cancer therapy, comprising expressing a fusion protein from a DNA sequence encoding a detection sequence, a cell adhesion sequence, and a signaling sequence, wherein the signaling sequence is configured to signal targeting of an anti-signaling CAR-T cell.
22. The method of claim 21, wherein the DNA sequence is selected from SEQ ID NO. 1, SEQ ID NO. 3, SEQ ID NO. 5, SEQ ID NO. 7, and SEQ ID NO. 9.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0014] The patent or application file contains at least one drawing executed in color. Copies of this patent or patent application publication with color drawing(s) will be provided to the Office upon request and payment of any necessary fee.
[0015] A detailed description of the invention is hereafter provided with specific reference being made to the drawings in which:
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DETAILED DESCRIPTION
[0024] Various aspects are described below with reference to the drawings. The relationship and functioning of the various elements of the aspects may better be understood by reference to the following detailed description. However, aspects are not limited to those illustrated in the drawings or explicitly described below. It should be understood that the drawings are not necessarily to scale, and in certain instances, details may have been omitted that are not necessary for an understanding of aspects disclosed herein, such as conventional fabrication and assembly. Headings are provided for the convenience of the reader and to assist organization of the disclosure and should not be construed to limit or otherwise define the scope of the invention.
[0025] Cancer treatment traditionally involves chemotherapy and surgery. Other promising treatments such as genetically engineered T cells called CAR-T (chimeric antigen receptor T cells) target surface proteins such as CD19. Unfortunately, these treatments do not inhibit metastasis. Our biologic consists of 3 components: (1) A fusion protein that detects cancer cells based on their lower pH with the help of pHLIP; (2) JAM binding to other tight junction components with neighboring cells that inhibits the metastasis of cancer cells; (3) A signaling target protein domain, such as CD19, that allows for the recognition of anti-CAR-T (such as anti-CD19-CAR-T) cells to target and eradicate the tumor.
[0026] Applicant believes the present disclosure represents the first biologic containing three separate domains with distinct functions targeting cancer while concomitantly reducing metastasis by promoting cancer cell adhesion to other cancer cells.
[0027] For example, the present disclosures describes a composition (biologic) having three functional domains: (1) pH-low-insertion peptide (pHLIP) which recognizes the low pH of cancer cells leading to the insertion of the peptide into the plasma membrane; (2) an extracellular domain of JAM proteins that fosters cell—cell interaction (including cellular cohesion); and (3) CD19 to be targeted by CAR-T cells. These compositions target cancer cells, and when coupled with anti-CD19 CAR-T cells, not only promote the death of the cancer cells but also decrease proliferation and metastasis.
[0028] The production of a biologic that inhibits metastasis of cancer cells would improve upon currently available targeted cancer treatments. For example, using a fusion protein that would recognize the targeted cell and insert itself into the membrane based on the decreased pH of tumors, which would also allow for the increased interaction between these cancer cells by increasing the tight junctions would decrease the incidence of metastasis. Also, using a targeted signal located on the surface of the membrane of cancer cells that is recognized by existing CAR-T technology would allow for the recognition of a great variety of tumors. Current immune therapy methods are limited due to the need to create individual types of CAR-T cells that recognize different targets such as CD19, CD38 and others, and due to the cost of production. The reason for failure of some of the CAR-T treatments is based on the poor health of the individual, which can result in a low quantity of responsive amount of transformed immune cells.
[0029] In our studies, we purified the four members of the Junctional Adhesion Molecule (JAM) protein family JAM-A, —B, —C and 4. We determined that JAMs increase the cell-cell interactions when they are expressed in the tight junction of the cell. We also determined that there is an increase in binding between heterotypic interactions of JAMs compared to homotypic interactions and E-Cadherin. Using the JAM proteins, therefore, will allow for the formation of tight junctions in homotypic or heterotypic interactions that subsequently result in decreasing metastasis in cancer cells. Depending on the patient's target tissue and cancer type the selection of a specific JAM family such as JAM-A, —B, —C or −4 leads to increase tight junction formation with other members of the JAM family.
[0030] A peptide sequence known as pH-low-insertion peptide (pHLIP) can recognize changes in pH and insert itself into the membrane of cancer cells. The pHLIP inserts its C-terminus through a membrane under low pH conditions (about 6 to about 6.5). The pHLIP peptide can deliver compounds such as phalloidin which is linked to the C-terminus and is cleaved inside the cells. This results in the immobilization of cytoskeleton and multinucleation due to F actin binding and filament stabilization. Using this pHLIP peptide will allow the fusion biologic to target the cancer cell's low-pH environment, and insert itself into the cancer cell membrane.
[0031] Without wishing to be bound to any particularly theory, applicant proposes a method in which a biologic composed of a fusion protein that contains three domains with specific functions will induce cancer cell death while concomitantly reducing cancer cell metastasis. The first domain consists of a pH-sensitive peptide, pHLIP that recognizes and inserts itself into the membrane of cancer cells. The second domain consists of the Junctional Adhesion Molecule (such as JAM-A, —B, —C and −4) which increases the number of tight junctions, allowing for tumor cell-cell interactions that decrease metastasis. The third domain consists of an extracellular region of the target protein that has been seen in many cancers that is a signaling sequence recognizable by a corresponding CAR-T cell. In some embodiments, this signaling sequence is CD19. The signaling sequence (or region) enables CAR-T cells to recognize, bind to, and eradicate the tumor.
[0032] To achieve the goal of decreasing metastasis, we created a biologic consisting of a fusion protein N-CD19-GS Linker-JAM-pHLIP peptide-C. This technology is based on the combination of tight junction components that bind tighter than other tight junction components such as claudin proteins. This fusion protein allows the pHLIP peptide to recognize the lower-pH environment produced by cancer cells. When the peptide recognizes the decrease in pH, it incorporates itself into the membrane of the cancer cell. The JAM region of the fusion protein binds to neighboring JAMs, promoting tight junction formation that results in the inhibition of cancer cell metastasis. This approach harnesses the power of tight junctions that allow for the cancer cells to stay within the tumor and not spread throughout the body. The extracellular region of the fusion protein signals recognition by corresponding CAR-T cells that kill (eradicate) the tumor. The novelty of this approach is the introduction of a target site for CAR-T cells on the biologic that can recognize tumors that do not have natively have the extracellular region (CD 19, for example) in or on their membrane surface.
[0033] The power of cell adhesion can be harnessed to decrease the incidence of metastasis in tumor cells. Using the tight junction protein junctional adhesion molecules, or JAMs (−A, −B, −C and 4), the incidence of metastasis can be decreased. With the combination of pH-sensitive peptides, pHLIP with JAMs, we can decrease metastasis. Additionally, using CD19 in a fusion with JAMs (−A, −B, −C, and 4) will attract CAR-T cells to target these tumors.
[0034] Using the property of cell adhesion, the presently described fusion proteins enable the increase of the tight junction's strength in tumors to prevent metastasis. With the combination of the pHLIP technology, specific tumor cells that increase tumor cell-cell interactions through tight junctions can be enhanced (targeted), resulting in a decrease in metastasis of tumor cells. With the help of extracellular regions (such as CD19), the binding of CAR-T cells can be increased that will target and kill tumor cells.
[0035] 1. Introduction
[0036] The tumor microenvironment (TME) is what surrounds a tumor, including blood vessels, immune cells, fibroblasts, signaling molecules, and extracellular matrix. The tumor and its microenvironment are closely related and constantly interact. Tumor cells achieve these interactions through cell-adhesion and recognition molecules, all members of the immunoglobulin superfamily (IgSF). Among the members of the IgSF are tight junction (TJ) components such as junctional adhesion molecules (JAMs) that act as gates and barriers to control the permeability of the paracellular space. JAMs are an IgSF subfamily that contain four members: A, B, C, and 4. These components are also responsible for compartmentalization of the cellular environment and the separation of tissues. JAM proteins form homotypic and heterotypic interaction among the same family members and may influence other members of the TJ. Contrary to the effects of other TJ components, JAMs are responsible for increased proliferation when downregulated. JAM-A upregulation has been associated with endothelial to mesenchymal transition (EMT). In glioblastoma cells, however, JAM-A may act as a tumor suppressor. In our studies, we determined that JAM homo- and heterotypic interactions are of high binding affinity, resulting in increased cell-to-cell interactions. We also determined that JAMs induced stronger cell adhesion than epithelial cadherin (E-CAD). Harnessing the function of JAMs in the TME may be of importance in translational solutions including those disclosed in the present application.
[0037] IgSF proteins play a role in cellular recognition. Tumors often display unique proteins that are naturally targeted by immune cells surveilling the homeostatic landscape. One antigen for cancer immunotherapy is the B-cell-specific surface marker CD19, used because of its expression in B-cell malignancies and lymphomas. An antigen recognizing CD19 (or other cell surface protein), therefore, known as anti-signaling (e.g. CD19) chimeric antigen receptor (CAR)T, is disclosed. It is fused to an intracellular signaling domain capable of activating T-cells to target and eradicate tumors. These CAR-Ts have a surface receptor that works like an antigen recognition domain that recognizes surface receptor targets (such as CD19) leading to activation, cytokine secretion, and cellular proliferation, which in turn lead to tumor eradication. CD19-directed CAR-T cell therapy has been successful in treating several B-cell lineage malignancies, including B-cell non-Hodgkin lymphoma (NHL). CD19-directed CAR-T cell therapy is a FDA-approved treatment that is being expanded to other immune cells and to treat solid tumors. The present disclosure builds on CAR-T cell therapy as a promising future for cancer treatments.
[0038] Biologics are powerful treatments that can be made of sugars, proteins, DNA, or composed of whole cells or tissues. Human insulin was the first recombinant biopharmaceutical approved in the United States in 1982. Protein-based therapeutics have been highly successful in the clinic and are recognized for their treatment potential. Based on their pharmacological activity, they can be divided into the categories of: (a) replacing a deficient protein, (b) enhancing a pathway, (c) performing a novel function or activity, (d) interference, and (e) delivering other compounds or proteins. They can be also be classified as non-covalent binding to their respective target, covalent bonding, and non-specific interactions with their respective targets. New engineered proteins—including bispecific mAbs and multi-specific fusion proteins, antibody-drug conjugates, and proteins with optimized pharmacokinetics—are currently under development. There are, however, no conceptually new developments in protein-based biologics. There has been no protein engineering applied to new strategies in decreasing cancer metastasis. Computational designs can be a theoretical approach to practical progress. A paradigm change in the methodologies and understanding of mechanisms is needed to overcome major challenges like the complexity of biological systems, resistance to therapy, and access to targets.
[0039] Fusion proteins and fusion peptides as biologics have been described. By joining different proteins that have different beneficial qualities, the potency, stability, and specificity of fusion proteins can be greatly enhanced compared with naturally occurring proteins. PRS-343 is a bispecific fusion protein targeting HER2 and CD137, a costimulatory receptor on T-cells. The PRS-343 architecture is derived from a trastuzumab variant and a CD137 specific anticalin. Anticalins are engineered variants of tear lipocalin and neutrophil-gelatinase-associated lipocalin (NGAL), where loops are randomized by mutagenesis. PRS-343 enables tumor-localized targeting of T-cells. This approach has the potential to provide a more localized activation of the immune system, resulting in higher efficacy and reduced peripheral toxicity. Following this report, the authors initiated a phase I clinical trial with PRS-343 as a first-in-class molecule.
[0040] In this application, we disclose a new type of protein-based biologic that aids cancer treatment with CAR-T therapies. We designed a modular three-part biologic that creates new strategies pertaining to pharmacological activity, and activity or function. In this disclosure, we describe the creation of a biologic that consists of three components: (1) a peptide that detects cancer cells based on their lower pH; (2) JAM extracellular domain for binding to other tight junction components in the tumor micro environment that inhibits the metastasis of cancer cells; (3) a signaling target protein domain (e.g. CD19) that allows for the recognition of anti-signaling CAR-T cells (e.g. anti-CD19 CAR-T cells). Our biologic is modular in that the JAM or anti-signaling domains can be exchanged for tumor-specific proteins that modulate cancer cell and tissue types.
[0041] Innovations that aid or CAR technology have been developed, such as the secretion of CD19-anti-Her2 bridging protein that allows for T-cell cytotoxicity both in vitro and in vivo. Other examples are the use of bispecific CAR-T to bring two cell types together such as cancer cells and T-cells, and the usage of donor stem cells or induced pluripotent stem cells to produce CAR specific treatments to derive natural killer cells, macrophages that can treat multiple myeloma. While these are very important contributions that target and treat cancer, patient medical needs remain unmet as several patient therapy still results in morbidity often from cancer cell metastasis. In our disclosure, we use a biologic to decrease cellular proliferation and metastasis.
[0042] Using JAMs as a part of our cell adhesion domain allows for the formation of cell adhesion homotypic or heterotypic interactions, or both. We recognized that JAM-A binds to other members of the family and coordinates the assembly of the TJ and the interplay with the adherens junction (AJ). The result of strengthening tumor cell—cell interactions subsequently result in decreasing metastasis in cancer cells. In order to introduce the extracellular domain of JAM proteins in the plasma membrane of tumor cells, we considered a peptide sequence known as pH-low-insertion peptide (pHLIP) that recognizes changes in pH and insert itself into the membrane of cancer cells. The pHLIP inserts its C-terminus through a membrane under low pH conditions (about 6.0— about 6.5). We recognized that this peptide has been used for the delivery of therapeutics. In our design, we considered that pHLIP might allow the fusion biologic to target the cancer cell's low pH and insert itself into the membrane, resulting in the extracellular domain of JAMs to be anchored to the cell surface.
[0043] The production of a biologic that inhibits metastasis of cancer cells would improve upon currently available targeted cancer treatment. Inhibition of cancer cell proliferation and metastasis is important in controlling tumor growth, but it is also important to sensitize the tumor to therapeutics, decrease proliferation, and ultimately eradicate it. In one embodiment to accomplish this, we used the extracellular domain of human CD19. The human CD19 antigen is a transmembrane protein belonging to the IgSF. CD19 is a biomarker for normal and neoplastic B cells, as well as follicular dendritic cells. CAR-T is an emerging therapy that targets B cell malignancies based on their cell surface display of CD19. We considered that the addition of this extracellular CD19 domain to our biologic would synergistically complement existing CD19 CAR-T therapies for eradicating tumors. Our approach increases tumor cell— cell adhesion, preventing tumor growth and metastasis, while displaying CD19 on the surface of cancer cells. The combination of these three domains will not be restricted to blood malignancies employed in emerging CAR-T therapy but benefit solid tumors as well.
[0044] In one embodiment, we created a fusion protein identified hereafter as CM19XA. The number 19 denotes CD19 while the letter A represents JAM-A soluble domain. The advantages of this biologic are that it contains three separate domains with distinct functions that target cancer cells that can be used in any patient, regardless of their health. This biologic helps existing CAR-T cells target a tumor through the recognition of CD19, while decreasing metastasis. Our biologic is modular and CD19 may be exchanged for other cell surface biomarkers such as CD22, CD133, Her-2, EGFR, mesothelin, and others, and the JAM may be any of the four members of the subfamily, whichever is relevant to the tumor tissue of origin.
[0045] Recent advances in protein engineering have come from creating multi-functional chimeric proteins containing modules from various proteins. These modules are typically joined via an oligopeptide linker, the correct design of which can contribute to the desired function of new biologically active molecule. Thus, in some embodiments, the peptides include a linking segment located between the cell adhesion sequence and the signaling sequence.
[0046] As a component of recombinant fusion proteins, linkers have utility in the construction of stable, bioactive fusion proteins. The general properties of linkers derived from naturally-occurring multi-domain proteins can be considered as the foundation in linker design. Empirical linkers are generally classified into three categories according to their structures: flexible linkers, rigid linkers, and in vivo cleavable linkers. (See Fusion Protein Linkers: Property, Design and Functionality. Xiaoying Chen, Jennica Zaro, and Wei-Chiang Shen. Adv Drug Deliv Rev. 2013 Oct. 15; 65(10): 1357-1369. doi: 10.1016/j.addr.2012.09.039.)
[0047] Linkers can also play a contributory role in the engineering of fusion proteins. Linkers can affect protein properties such as expression level, solubility, and biological functions. For linker design and optimization, one of the key factors is the flexibility or rigidity of the linker sequence, which describes the tendency of a linker to maintain a stable conformation, impacting directly the physical distance between domains in a fusion protein. Library methods of design exist or can be easily constructed based on conventional practice and experimental designs depending on the fusion domains and desired function. (See Zliang Huang, Chong Zhang, Xin-Hui Xing. Design and construction of chimeric linker library with controllable flexibilities for precision protein engineering, Methods in Enzymology, Academic Press, Volume 647, 2021, Pages 23-49, ISSN 0076-6879, ISBN 9780128208182, https://doi.org/10.1016/bs.mie.2020.12.004.)
[0048] In order to use our biologic to decrease metastasis and to target these cancer cells for destruction by anti-CD19 CAR-T cells, we address the following questions: (1) Does CM19XA target cancer cells specifically? (2) Does CM19XA decrease metastasis by using the JAM components to establish and increase cell—cell interactions? (3) Does CD19 allow for the targeting of anti-CD19 CAR-T cells? (4) Does CM19XA work on other cancer cell lines? Answers to these questions are addressed in the examples below as illustrated by observations in the accompanying figures.
Examples
[0049] Except in the examples, or where otherwise expressly indicated, all numerical quantities in this description indicating amounts of material or conditions of reaction or use are to be understood as modified by the word “about” in describing the broadest scope of the invention. Practice within the numerical limits stated is generally preferred. The first definition of an acronym or other abbreviation applies to all subsequent uses herein of the same abbreviation and applies mutatis mutandis to normal grammatical variations of the initially defined abbreviation; and, unless expressly stated to the contrary, measurement of a property is determined by the same technique as previously or later referenced for the same property.
[0050] Unless indicated otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this invention belongs.
[0051] Throughout this application, where publications are referenced, the disclosures of these publications in their entireties are hereby incorporated by reference into this application to more fully describe the state of the art to which this invention pertains.
[0052] It is also to be understood that this invention is not limited to the specific embodiments and methods described below, as specific components or conditions may, of course, vary. Furthermore, the terminology used herein is used only for the purpose of describing particular embodiments of the present invention and is not intended to be limiting in any way.
[0053] It must also be noted that, as used in the specification and the appended claims, the singular form “a,” “an,” and “the” comprise plural referents unless the context clearly indicates otherwise. For example, reference to a component in the singular is intended to comprise a plurality of components.
[0054] The term “or” is understood to mean “and/or”.
[0055] The term “comprising” is synonymous with “including,” “having,” “containing,” or “characterized by.” These terms are inclusive and open-ended and do not exclude additional, unrecited elements or method steps.
[0056] The phrase “consisting of” excludes any element, step, or ingredient not specified in the claim. When this phrase appears in a clause of the body of a claim, rather than immediately following the preamble, it limits only the element set forth in that clause; other elements are not excluded from the claim as a whole.
[0057] The phrase “consisting essentially of” limits the scope of a claim to the specified materials or steps, plus those that do not materially affect the basic and novel characteristic(s) of the claimed subject matter.
[0058] The terms “comprising”, “consisting of”, and “consisting essentially of” can be alternatively used. When one of these three terms is used, the presently disclosed and claimed subject matter can include the use of either of the other two terms.
[0059] 2. Materials and Methods
[0060] 2.1. Cloning, Protein Expression, and Purification
[0061] We synthesized the E. coli codon-optimized DNA sequence of CM19XA (Twist Bioscience, San Francisco, Calif., USA). CM19XA was supplied by TWIST biosciences cloned in the expression vector pET28a, between restrictions sites Ndel and Xhol. A stop codon was introduced prior to the Xhol. The sequence upstream Ndel was the native sequence of pET28a which includes a 6xHis-tag sequence. pET28a CM19XA is preserved by transformation in the bacterial strain DH5a. Plasmid purification of a single bacterial colony was performed using the Zyppy Plasmid Miniprep Kit from Zymo Research. Sanger sequencing was performed by Genewiz (South Plainfield, N.J., USA) to determine whether the plasmid coding for CD19-JAMA-pHLIP was correct and that there were no mutations present. After the verification of the plasmid sequence, we transformed the plasmid into SHuffle T7 express bacterial cells (New England Biolabs, Ipswich, N.Y., USA) to compare which bacterial strain would give us the highest protein yield. Cells are grown to an OD.sub.600 of 1, followed by addition of 0.3 mM IPTG, and maintained at 16° C. for 18 hours. The French Press method was used to lyse the transformed bacterial cells. The resuspended cells were loaded into the Thermo Spectronic French Pressure Cell Press Model FA-078. Lysis was performed at 1500-2000 psi using 30 mL of Wash Buffer consisting of 500 mM NaCl and 30 mM Tris and the lysate was collected in a 50 mL conical tube. Centrifugation was performed on the lysate for 30 min at 10,000 RPM with a F15-8×50cy rotor.
[0062] The supernatant was decanted into a 50 mL tube containing Ni-NTA Agarose beads from Prometheus (catalog no. 20-512) and incubated while rotating for 1 h at 4° C. The column was washed with 100 mL of wash buffer containing 30 mM TRIS pH 7.5 and 500 mM NaCl, and 30 mM Imidazole pH 8.0. The supernatant was eluted for 3 min with 300 mM Imidazole, then concentrated using the Microsep Advance with 10 k Omega centrifugal device (reference no. MCP010C41) from Pall Corporation at 10,000 RPM for 10 min until a final volume of 2 mL was reached.
[0063] 2.2. Size Exclusion Chromatography (SEC)
[0064] Size exclusion chromatography was performed using the NGC System (BioRad, Hercules, Calif., USA). The column used was the ENrich™ SEC 65,010×300 mm, 24 mL, prepacked high-resolution SEC 650 column, with a size range of 5650 kDa (BioRad, Hercules, Calif., USA). The protein peak was observed using the BioRad SEC software. The product peaks' positions were compared relative to those of the size exclusion standards from BioRad (catalog no. 151-1901). Protein concentration was determined using the Nanodrop Onec from Thermo Scientific. The running buffer used was PBS, and proteins were also stored in PBS. Purification of JAM-A was performed as described in our previous publication.
[0065] 2.3. SDS-PAGE Assay
[0066] Two μg of boiled MBP, JAM-A, and CM19XA were electrophoresed on 8% SDS-PAGE gel (BioRad). Gel staining was performed using standard protocols.
[0067] 2.4. Tissue Culture and In Vitro Experiments with CAL27 and A549 Cells
[0068] Tongue squamous cell carcinoma cells (Ca127, ATCC CRL-2095) were obtained from American Type Culture Collection (ATCC, Manassas, Va., USA) and cultured according to the guidelines provided by the organization. RPMI, calcium-free with 10% FBS was used for all manipulations and the experimental set-up of CAL27 cells. A549 cells, epithelial cell lung carcinoma, were obtained from ATCC (catalog reference CCL-185).
[0069] 2.5. Proliferation Assay
[0070] The first day of the proliferation assay consisted of 30,000 CAL27 cells seeded on 48-well plates. On the second day (at approximately 16 hours), cells were treated with PBS or proteins at a final protein concentration of 1 μM (MBP-JAMA or CM19XA). After 24 hours, proliferation assays were performed using ATPlite Luminescence Assay System (product number 6016943, PerkinElmer, American Fork, Utah, USA) following the manufacturer's instructions. After 72 hours of mock or anti-CD19 CAR-T killing assay for both CAL27 and A549 cells, we performed the ATPlite Luminescence Assay [49,50].
[0071] 2.6. Wound Healing Assay
[0072] The wound healing assay was performed as follows: on the first day, 15,000 CAL27 cells were seeded on each chamber of the 2-well silicone insert (IBIDI, Gräfelfing, Germany) separated by a silicone gap of 500±100 μm. After 24 hours, proteins were added at a final concentration of 1 μM, JAM-A or CM19XA. Cells were incubated with the treatments for 2 hours at 37° C. Following the treatment, the silicon insert was removed. The wells were rinsed once with PBS and then each well was filled with DMEM F-12 media with 10% FBS (Genesee Scientific, El Cajon, Calif., USA). The closure of the gap (500 μm+/− 100 μm at time zero) was evaluated 16 hours post treatment using an Olympus IX70 microscope (Olympus Life Science, Waltham, Mass., USA). Images were analyzed using cellSens Entry Microscopy Imaging Software by Olympus Life Science. The distance of the gaps was then quantified using ImageJ [511. Data analyzed using FastTrack AI (IBIDI, Grafelfing, Germany)
[0073] 2.7. Real-Time Cell Invasion
[0074] Real-time cell invasion was determined after the various treatments. The xCEL-Ligence RTCA cell monitoring system was used to quantify real-time invasion of cells per the protocol suggested by the manufacturer (ACEA Biosciences, Blue Springs, Mo., USA). The invasion was performed in 16-well CIM plates (n=10 groups per treatment, ACEA Biosciences, Blue Springs, Mo., USA). The tops of the wells were coated using a 1:40 Matrigel concentration (Fisher Scientific, Pittsburgh, Pa., USA). Then, a concentration of 20,000 CAL27 cells was used with 100 μL of 2% FBS RPMI, with and without proteins. The bottom chamber wells were treated with 160 μL of 10% FBS RPMI. Cells were placed in the xCeLLingence RTCA instrument, where the invasion readings were taken 4 times an hour for 24 hours.
[0075] 2.8. CAR-T Cell Killing Assay
[0076] On the first day, 5000 CAL27 or A549 or HUVEC cells/well (catalog C0035C, Thermo Fisher Scientific, Mass., USA) were plated on a 96-well plate. On day 2, cells were incubated for 3 h under the following conditions: 14 wells had no treatment, which was used as a control. In 16 of the wells, 1 μM soluble JAM-A protein was introduced. In 14 of the wells, 1 μM of CM19XA was introduced. On day 2, both mock CAR-T and anti-CD19 CAR-T were dispensed to half of the wells in each treatment. The killing assay was allowed to continue for a total of 72 hours.
[0077] 2.9. Computer Models of the Biologic
[0078] Protein models were produced using UCSF Chimera v. 1.15 package from the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco (supported by NIH P41 RR-01081).
[0079] 2.10. Statistical Analysis
[0080] Student's t-test was performed using GraphPad Prism version 8.0 to generate the graphs to compare control vs. JAM-A and CM19XA.
[0081] 3. Results and Discussion
[0082] 3.1. Expression and Purification of CM19XA in E. coli
[0083] Extracellular domains of JAM-A were expressed as a fusion with CD19 and pHLIP containing an N-terminal 6x-HIS tag to allow for the use of Nickel NTA purification strategy (
[0084] 3.2. Proliferation Assay
[0085] To determine whether CM19XA targets cancer cells, we used the cell line CAL27 in a proliferation assay. We recognized that the membrane composition of the TJ is simple, consisting of claudin-1, JAM-A, and occludin. We also recognized that the downregulation of JAM-A through siRNA leads to cell proliferation. We confirmed this result and comparing the effects of the soluble extracellular domain of JAM-A and CM19XA in CAL27 cells. The comparison of these two proteins resulted in opposite CAL27 cell behavior in the proliferation assay (
[0086] The proliferation assay of CAL27 cells shows that there is a decrease in the proliferation with the addition of CM19XA. The proliferation assay was different for the introduction of JAM-A, where there was an increase of proliferation as compared to no effect with the control. The data discussed above shows that soluble JAM-A decreases tumor cell— cell adhesion, leading to an increase in cellular proliferation. The biologic CM19XA increased cell-to-cell adhesion by increasing JAM protein binding to other TJ proteins either by homotypic or heterotypic interactions. This could be due to JAM-A not inserting itself into the membrane and binding to other JAMs (−A, −B, −C, and 4) in cis that cause an interruption in the cell-to-cell interactions meaning that there is a decrease in TJ trans interactions. In the case of CM19XA, the decrease in proliferation is caused by the pH sensitive region of the biologic inserting itself into the membrane of the cancer cells that allows the JAM-A portion of the biologic to reinforce the binding of native JAM proteins in trans leading to greater tumor cell-to-cell interactions. The phenotype observed, therefore, is consistent with decreased proliferation because CM19XA increases binding of TJ components such as JAMs.
[0087] 3.3. Wound Healing Assay
[0088] In order to validate the ATP proliferation experiments where JAM-A increases CAL27 proliferation and CM19XA decreased CAL27 cell proliferation, we performed a wound healing assay. This assay allow us qualitatively and quantitatively determine whether the JAM-A portion of CM19XA would increase tumor cell—cell interactions, and as a result, decrease cell migration, resulting in a larger observed gap. Cell migration is important in many physiological processes that are heavily regulated. Wound healing and cancer cell migration assays are widely used for the understanding of cues that can increase or decrease cell migration. Thus, we decided to use CM19XA with CAL27 cells to determine the effect this biologic had on cell migration by performing wound healing assays.
[0089] The wound healing experiments show the effects of our biologic, CM19XA qualitatively at
[0090] 3.4. Cell Invasion Assay
[0091] Based on the results of the wound healing assay, we determined the effect of CM19XA on cell invasion. Cell invasion recordings were observed to be low for the control containing only 10% FBS. JAM-A resulted in an increase of cell invasion (
[0092] Cell invasion recordings were observed to be low for the control containing only 10% FBS. JAM-A resulted in an increase of cell invasion (
[0093] 3.5. CM19XA Only Targets Cancer Cells
[0094] In order to determine whether CM19XA only targeted cancer cells, we used the non-cancerous HUVEC cell line. We determined that addition of soluble JAM-A protein increased cellular proliferation (
[0095] To determine whether CM19XA targets other cancer cells, we repeated the cytotoxicity experiments with A549 lung cancer cells. The cytotoxicity cell assay in
[0096] 3.6. Cytotoxicity Assay
[0097] To determine whether the CD19 portion of CM19XA worked as a signal to allow for CAR-T cells to recognize and kill cancer cells, we performed cytotoxicity assays. We used cultured cells as a model system to determine the functionality of extracellular CD19 as a target signal for anti-CD19 CAR-T cells. Cells were observed to grow without problems for mock CAR-T experiments using a CAR-T cell that did not recognize the CD19 portion of CM19XA as expected. There was no effect on the killing of CAL27 cells with the mock CAR-T experiments using control (no protein), JAM-A, and CM19XA (
[0098] 3.7. Proposed Mode of Action of CM19XA
[0099] Without wishing to be bound to any particular theory, we present our biologic, CM19XA that identifies and target cancers according to the decreased pH of the membrane of cancer cells (
[0100] The identification of pro- and anti-cancer roles among TJs such as claudins has been puzzling. Similarly, the role of JAM-A and JAM-C in the progression of malignant neoplasm has been described to have a number of contradicting phenotypes. The role of JAM proteins in cancer is, therefore, complex. JAMs function by interacting with other proteins via several mechanisms: direct cell—cell interaction on adjacent cells, stabilization of adjacent cell surface receptors on the same cell, and interactions between JAM and cell surface receptors expressed on adjacent cells. The diverse interactions contribute to both the pro- and antitumorigenic functions of JAM. This paradigm can also be observed in a study that presents evidence that JAM-A knockdown accelerates the proliferation and migration of human keratinocytes. Other research examined the role of JAM-A in multiple myeloma (MM). In vitro JAM-A inhibition impaired MM migration, while in vivo treatment with an anti-JAM-A monoclonal antibody impaired tumor progression. These results could correspond to JAM-A interactions and effects within the same cell or to a signal transduction that is not fully understood. The importance of mechanical transduction from cellular junctions, both TJ and AJ, is poorly understood. Other research highlights the need for further study of this phenomenon. Additionally, a report that JAM-A functions in a tumor-suppressive role by increasing apoptosis and suppressing proliferation in colorectal adenocarcinoma revealed that loss of JAM-A expression increased intestinal epithelial cell proliferation. The relevance of this paradigm may simply indicate that regulation of JAM-A expression in the context of cell proliferation may be tissue- and cell-specific.
[0101] Considering that JAM-A is a player that coordinates TJ and Aj's interplay, understanding its function in tumorigenesis and metastasis is germane to the identification and selection of junctional adhesion molecule domain. While assessing invasive breast cancer, data shows that cell lines with the lowest migratory capacity (T47D and MCF-7 cells) express higher levels of JAM-A relative to more migratory lines (MDA-MB-231 cells). Ectopic expression of JAM-A in these highly metastatic cells diminished both cell migration and invasion. On the contrary, silencing of JAM-A expression enhanced the invasiveness of the less migratory lines. Nevertheless, evidence for the opposite phenotypes can also be found. Functional inhibition of JAM-A protein activity inhibits the adhesion and trans-endothelial migration of breast cancer cells. Human nasopharyngeal cancer cells exhibit increased JAM-A levels, which leads to increased endothelial-to-mesenchymal transition. In lung adenocarcinoma, the suppression of JAM-A expression by siRNA inhibited cellular motility and invasiveness, while JAM-A inhibition caused a decrease in colony-forming capability in vitro and an inhibition of tumorigenicity in vivo.
[0102] As a final consideration, CM19XA lacks the capability of intracellular signaling. This could be a reason why the results we observed deviate from what could be expected according to the previous discussion. CM19XA is capable of carrying out two functions once inserted in the membrane through pHLIP. First, CD19 attracts CAR-T cells; second, JAM-A interacts with other TJ membrane proteins (trans and cis interactions) and also exhibits self-interaction; both will result in cis and trans interactions. From this point of view, CM19XA can be examined for its role as an adhesion molecule rather than its signal transduction leading to tumor related phenotypes. If our hypothesis is correct, then the idea that regulation of JAM-A expression in the context of cell proliferation may be tissue- and cell-specific will not apply. We imagine that as an adhesion promoting agent CM19XA will be tissue independent. Tissue specificity may require utilizing a different biology (
[0103] The modularity of our biologic can address the differences in TJ composition due to tissue-specific expression of its membrane components. CD19 can be used as a recognition signal for anti-CD19 CAR-T cells. In traditional anti-CD19 CAR-T therapies, the cell targets the naturally displayed CD19 of B cell malignancies. The modularity of our biologic will enable the selection of any surface biomarker desired based on the tumor type.
[0104] 4. Conclusions
[0105] We designed and tested CM19XA, a three-domain biologic. We presented evidence that our biologic inserts itself into cancer cells using its pHLIP peptide. The second domain of the biologic, JAM-A, increases cell-to-cell interactions that in turn decrease proliferation and may prevent tumor cells from leaving their niche, inhibiting metastasis. The third domain of the biologic, CD19, is recognized by anti-CD19 CAR-T cells, allowing for targeted cancer cell killing. Our biologic produced similar results in two cell lines, CAL27 and A549 and had no effect on the non-cancer cell line HUVEC, showing that it is cancer specific. This suggests that CM19XA and protein constructs like it may be used as a therapeutic that recognizes multiple cancer cell lines. CM19XA's adhesive properties provide increased cell-to-cell interactions through its JAM domain, and cellular recognition of immune cells through the CD19 domain, resulting in cancer cell killing. We suggest that CM19XA is a new classification of protein-based biologic that pairs with current CAR therapies to recognize cancer cells, increases cell-to-cell interactions that lead to a decrease in proliferation and metastasis, and increases cancer cell killing.
[0106] CAR-T is produced from a patient's blood, where the gene for a single receptor is inserted with the purpose of attacking a specific cancer cell. These genetically engineered T-cells are then re-introduced into the patient. Looking forward, CM19XA (and biologics like it) will advance the treatment of cancer by serving as an additional tumor specific mechanism. This biologic can be manufactured at large scale and can be used to target CD19, CD38, or other specific tumor targets using the corresponding CAR-T cell design. Depending on the type of tumor cell to be targeted, the JAM proteins (A, B, C, and 4) can be interchanged. Future work will include in vivo experimentation and characterization of potency, stability, and specificity. Analysis of CM19XA and its derivatives will involve cytokine release syndrome (CRS) grading and other safety measurements as the research progresses.
[0107] A nucleic acid sequence useful for expressing a metastasis inhibiting fusion protein of plasmid pET28a is as follows (SEQ ID NO: 1):
TABLE-US-00001 1 actatatccg gattggcgaa tgggacgcgc cctgtagcgg cgcattaagc gcggcgggtg 60 tggtggttac gcgcagcgtg accgctacac ttgccagcgc cctagcgccc gctcctttcg 120 ctttcttccc ttcctttctc gccacgttcg ccggctttcc ccgtcaagct ctaaatcggg 180 ggctcccttt agggttccga tttagtgctt tacggcacct cgaccccaaa aaacttgatt 240 agggtgatgg ttcacgtagt gggccatcgc cctgatagac ggtttttcgc cctttgacgt 300 tggagtccac gttctttaat agtggactct tgttccaaac tggaacaaca ctcaacccta 360 tctcggtcta ttcttttgat ttataaggga ttttgccgat ttcggcctat tggttaaaaa 420 atgagctgat ttaacaaaaa tttaacgcga attttaacaa aatattaacg cttacaattt 480 aggtggcact tttcggggaa atgtgcgcgg aacccctatt tgtttatttt tctaaataca 540 ttcaaatatg tatccgctca tgaattaatt cttagaaaaa ctcatcgagc atcaaatgaa 600 actgcaattt attcatatca ggattatcaa taccatattt ttgaaaaagc cgtttctgta 660 atgaaggaga aaactcaccg aggcagttcc ataggatggc aagatcctgg tatcggtctg 720 cgattccgac tcgtccaaca tcaatacaac ctattaattt cccctcgtca aaaataaggt 780 tatcaagtga gaaatcacca tgagtgacga ctgaatccgg tgagaatggc aaaagtttat 840 gcatttcttt ccagacttgt tcaacaggcc agccattacg ctcgtcatca aaatcactcg 900 catcaaccaa accgttattc attcgtgatt gcgcctgagc gagacgaaat acgcgatcgc 960 tgttaaaagg acaattacaa acaggaatcg aatgcaaccg gcgcaggaac actgccagcg 1020 catcaacaat attttcacct gaatcaggat attcttctaa tacctggaat gctgttttcc 1080 cggggatcgc agtggtgagt aaccatgcat catcaggagt acggataaaa tgcttgatgg 1140 tcggaagagg cataaattcc gtcagccagt ttagtctgac catctcatct gtaacatcat 1200 tggcaacgct acctttgcca tgtttcagaa acaactctgg cgcatcgggc ttcccataca 1260 atcgatagat tgtcgcacct gattgcccga cattatcgcg agcccattta tacccatata 1320 aatcagcatc catgttggaa tttaatcgcg gcctagagca agacgtttcc cgttgaatat 1380 ggctcataac accccttgta ttactgttta tgtaagcaga cagttttatt gttcatgacc 1440 aaaatccctt aacgtgagtt ttcgttccac tgagcgtcag accccgtaga aaagatcaaa 1500 ggatcttctt gagatccttt ttttctgcgc gtaatctgct gcttgcaaac aaaaaaacca 1560 ccgctaccag cggtggtttg tttgccggat caagagctac caactctttt tccgaaggta 1620 actggcttca gcagagcgca gataccaaat actgtccttc tagtgtagcc gtagttaggc 1680 caccacttca agaactctgt agcaccgcct acatacctcg ctctgctaat cctgttacca 1740 gtggctgctg ccagtggcga taagtcgtgt cttaccgggt tggactcaag acgatagtta 1800 ccggataagg cgcagcggtc gggctgaacg gggggttcgt gcacacagcc cagcttggag 1860 cgaacgacct acaccgaact gagataccta cagcgtgagc tatgagaaag cgccacgctt 1920 cccgaaggga gaaaggcgga caggtatccg gtaagcggca gggtcggaac aggagagcgc 1980 acgagggagc ttccaggggg aaacgcctgg tatctttata gtcctgtcgg gtttcgccac 2040 ctctgacttg agcgtcgatt tttgtgatgc tcgtcagggg ggcggagcct atggaaaaac 2100 gccagcaacg cggccttttt acggttcctg gccttttgct ggccttttgc tcacatgttc 2160 tttcctgcgt tatcccctga ttctgtggat aaccgtatta ccgcctttga gtgagctgat 2220 accgctcgcc gcagccgaac gaccgagcgc agcgagtcag tgagcgagga agcggaagag 2280 cgcctgatgc ggtattttct ccttacgcat ctgtgcggta tttcacaccg caatggtgca 2340 ctctcagtac aatctgctct gatgccgcat agttaagcca gtatacactc cgctatcgct 2400 acgtgactgg gtcatggctg cgccccgaca cccgccaaca cccgctgacg cgccctgacg 2460 ggcttgtctg ctcccggcat ccgcttacag acaagctgtg accgtctccg ggagctgcat 2520 gtgtcagagg ttttcaccgt catcaccgaa acgcgcgagg cagctgcggt aaagctcatc 2580 agcgtggtcg tgaagcgatt cacagatgtc tgcctgttca tccgcgtcca gctcgttgag 2640 tttctccaga agcgttaatg tctggcttct gataaagcgg gccatgttaa gggcggtttt 2700 ttcctgtttg gtcactgatg cctccgtgta agggggattt ctgttcatgg gggtaatgat 2760 accgatgaaa cgagagagga tgctcacgat acgggttact gatgatgaac atgcccggtt 2820 actggaacgt tgtgagggta aacaactggc ggtatggatg cggcgggacc agagaaaaat 2880 cactcagggt caatgccagc gcttcgttaa tacagatgta ggtgttccac agggtagcca 2940 gcagcatcct gcgatgcaga tccggaacat aatggtgcag ggcgctgact tccgcgtttc 3000 cagactttac gaaacacgga aaccgaagac cattcatgtt gttgctcagg tcgcagacgt 3060 tttgcagcag cagtcgcttc acgttcgctc gcgtatcggt gattcattct gctaaccagt 3120 aaggcaaccc cgccagccta gccgggtcct caacgacagg agcacgatca tgcgcacccg 3180 tggggccgcc atgccggcga taatggcctg cttctcgccg aaacgtttgg tggcgggacc 3240 agtgacgaag gcttgagcga gggcgtgcaa gattccgaat accgcaagcg acaggccgat 3300 catcgtcgcg ctccagcgaa agcggtcctc gccgaaaatg acccagagcg ctgccggcac 3360 ctgtcctacg agttgcatga taaagaagac agtcataagt gcggcgacga tagtcatgcc 3420 ccgcgcccac cggaaggagc tgactgggtt gaaggctctc aagggcatcg gtcgagatcc 3480 cggtgcctaa tgagtgagct aacttacatt aattgcgttg cgctcactgc ccgctttcca 3540 gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg 3600 tttgcgtatt gggcgccagg gtggtttttc ttttcaccag tgagacgggc aacagctgat 3660 tgcccttcac cgcctggccc tgagagagtt gcagcaagcg gtccacgctg gtttgcccca 3720 gcaggcgaaa atcctgtttg atggtggtta acggcgggat ataacatgag ctgtcttcgg 3780 tatcgtcgta tcccactacc gagatatccg caccaacgcg cagcccggac tcggtaatgg 3840 cgcgcattgc gcccagcgcc atctgatcgt tggcaaccag catcgcagtg ggaacgatgc 3900 cctcattcag catttgcatg gtttgttgaa aaccggacat ggcactccag tcgccttccc 3960 gttccgctat cggctgaatt tgattgcgag tgagatattt atgccagcca gccagacgca 4020 gacgcgccga gacagaactt aatgggcccg ctaacagcgc gatttgctgg tgacccaatg 4080 cgaccagatg ctccacgccc agtcgcgtac cgtcttcatg ggagaaaata atactgttga 4140 tgggtgtctg gtcagagaca tcaagaaata acgccggaac attagtgcag gcagcttcca 4200 cagcaatggc atcctggtca tccagcggat agttaatgat cagcccactg acgcgttgcg 4260 cgagaagatt gtgcaccgcc gctttacagg cttcgacgcc gcttcgttct accatcgaca 4320 ccaccacgct ggcacccagt tgatcggcgc gagatttaat cgccgcgaca atttgcgacg 4380 gcgcgtgcag ggccagactg gaggtggcaa cgccaatcag caacgactgt ttgcccgcca 4440 gttgttgtgc cacgcggttg ggaatgtaat tcagctccgc catcgccgct tccacttttt 4500 cccgcgtttt cgcagaaacg tggctggcct ggttcaccac gcgggaaacg gtctgataag 4560 agacaccggc atactctgcg acatcgtata acgttactgg tttcacattc accaccctga 4620 attgactctc ttccgggcgc tatcatgcca taccgcgaaa ggttttgcgc cattcgatgg 4680 tgtccgggat ctcgacgctc tcccttatgc gactcctgca ttaggaagca gcccagtagt 4740 aggttgaggc cgttgagcac cgccgccgca aggaatggtg catgcaagga gatggcgccc 4800 aacagtcccc cggccacggg gcctgccacc atacccacgc cgaaacaagc gctcatgagc 4860 ccgaagtggc gagcccgatc ttccccatcg gtgatgtcgg cgatataggc gccagcaacc 4920 gcacctgtgg cgccggtgat gccggccacg atgcgtccgg cgtagaggat cgagatctcg 4980 atcccgcgaa attaatacga ctcactatag gggaattgtg agcggataac aattcccctc 5040 tagaaataat tttgtttaac tttaagaagg agatatacca tgggcagcag ccatcatcat 5100 catcatcaca gcagcggcct ggtgccgcgc ggcagccata tggaaaacct gtatttccag 5160 gggcccgagg aacccctggt ggtgaaagtc gaggagggcg ataacgctgt cctgcaatgc 5220 cttaagggaa cgtctgacgg ccccacacaa caattaacat ggtctcgcga atcccccttg 5280 aagccctttt tgaaactgtc attaggcttg cccggtcttg ggatccacat gcgtccatta 5340 gcgatttggc ttttcatctt caatgtctcg caacaaatgg gcggtttcta cctttgtcaa 5400 cctggacccc ctagtgaaaa agcgtggcaa cccgggtgga ctgtcaatgt cgaaggatct 5460 ggcgagcttt tccgttggaa cgtaagtgac ttaggtggac tgggctgcgg tcttaaaaat 5520 cgctccagcg agggcccaag tagtccatct ggcaaactga tgtcgccaaa gctttatgtt 5580 tgggcaaaag atcgcccaga aatttgggaa ggtgagccgc cctgcttacc accccgtgat 5640 tctttgaacc aatcacttag ccaggactta actatggcac cagggagtac gctttggttg 5700 agttgcggcg ttcctcctga ttcagtctcc cgcggccctc tgtcttggac gcacgtccat 5760 ccaaagggcc cgaagtccct gttaagcctt gagttgaaag atgaccgccc tgctcgcgat 5820 atgtgggtca tggaaacggg gttgctttta ccgcgtgcca cagcgcaaga tgcgggaaaa 5880 tattactgcc accgcggaaa tttaacgatg tccttccatt tggagatcac cgcccgtccg 5940 gtattgtggc actggctgct gcgcacaggg ggctggaaag ggggatccgg tgggtctgga 6000 ggaagtggcg gaagtggtgg atctggcggt agttccgtga cggtccactc atctgagccg 6060 gaagttcgca ttcctgaaaa caaccccgta aaactgagtt gcgcctattc agggttttca 6120 tcacctcgcg tcgaatggaa attcgatcaa ggtgacacca ctcgcttagt gtgttataac 6180 aacaaaatca cggcgtcata cgaggatcgc gttactttct taccaacagg catcaccttt 6240 aaatctgtaa cacgcgagga tacaggaacc tatacttgta tggtttcgga ggagggtggg 6300 aattcgtacg gcgaggtaaa agtcaaattg attgtgttag tcccgccttc aaagcccacg 6360 gttaatattc cctcgtctgc tacaattggt aaccgcgccg ttcttacatg ctccgaacaa 6420 gatggtagtc cgccctccga atatacatgg ttcaaggacg gcatcgtaat gccaacaaat 6480 ccgaaaagta cacgcgcttt cagcaattcg tcatacgtct taaatcccac caccggcgaa 6540 ttggtcttcg atccactttc agcctctgac actggtgagt actcatgcga ggctcgtaat 6600 ggctatggta cgccaatgac aagtaacgct gtacgcatgg aggcggtcga acgcaacgtt 6660 ggagttgcct gtgagcagaa tcccatctac tgggcgcgct atgcggactg gttattcacg 6720 acacccttac tgctgttgga cttagccctt cttgttgacg ccgatgaggg aactgggtga 6780 tgactcgagc accaccacca ccaccactga gatccggctg ctaacaaagc ccgaaaggaa 6840 gctgagttgg ctgctgccac cgctgagcaa taactagcat aaccccttgg ggcctctaaa 6900 cgggtcttga ggggtttttt gctgaaagga gga
[0108] The translation product of pET28a from the encoding nucleic acid SEQ ID NO: 1 is SEQ ID NO. 2:
TABLE-US-00002 Met Gly Ser Ser His His His His His His Ser Ser Gly Leu Val Pro 1 5 10 15 Arg Gly Ser His Met Glu Asn Leu Tyr Phe Gln Gly Pro Glu Glu Pro 20 25 30 Leu Val Val Lys Val Glu Glu Gly Asp Asn Ala Val Leu Gln Cys Leu 35 40 45 Lys Gly Thr Ser Asp Gly Pro Thr Gln Gln Leu Thr Trp Ser Arg Glu 50 55 60 Ser Pro Leu Lys Pro Phe Leu Lys Leu Ser Leu Gly Leu Pro Gly Leu 65 70 75 80 Gly Ile His Met Arg Pro Leu Ala Ile Trp Leu Phe Ile Phe Asn Val 85 90 95 Ser Gln Gln Met Gly Gly Phe Tyr Leu Cys Gln Pro Gly Pro Pro Ser 100 105 110 Glu Lys Ala Trp Gln Pro Gly Trp Thr Val Asn Val Glu Gly Ser Gly 115 120 125 Glu Leu Phe Arg Trp Asn Val Ser Asp Leu Gly Gly Leu Gly Cys Gly 130 135 140 Leu Lys Asn Arg Ser Ser Glu Gly Pro Ser Ser Pro Ser Gly Lys Leu 145 150 155 160 Met Ser Pro Lys Leu Tyr Val Trp Ala Lys Asp Arg Pro Glu Ile Trp 165 170 175 Glu Gly Glu Pro Pro Cys Leu Pro Pro Arg Asp Ser Leu Asn Gln Ser 180 185 190 Leu Ser Gln Asp Leu Thr Met Ala Pro Gly Ser Thr Leu Trp Leu Ser 195 200 205 Cys Gly Val Pro Pro Asp Ser Val Ser Arg Gly Pro Leu Ser Trp Thr 210 215 220 His Val His Pro Lys Gly Pro Lys Ser Leu Leu Ser Leu Glu Leu Lys 225 230 235 240 Asp Asp Arg Pro Ala Arg Asp Met Trp Val Met Glu Thr Gly Leu Leu 245 250 255 Leu Pro Arg Ala Thr Ala Gln Asp Ala Gly Lys Tyr Tyr Cys His Arg 260 265 270 Gly Asn Leu Thr Met Ser Phe His Leu Glu Ile Thr Ala Arg Pro Val 275 280 285 Leu Trp His Trp Leu Leu Arg Thr Gly Gly Trp Lys Gly Gly Ser Gly 290 295 300 Gly Ser Gly Gly Ser Gly Gly Ser Gly Gly Ser Gly Gly Ser Ser Val 305 310 315 320 Thr Val His Ser Ser Glu Pro Glu Val Arg Ile Pro Glu Asn Asn Pro 325 330 335 Val Lys Leu Ser Cys Ala Tyr Ser Gly Phe Ser Ser Pro Arg Val Glu 340 345 350 Trp Lys Phe Asp Gln Gly Asp Thr Thr Arg Leu Val Cys Tyr Asn Asn 355 360 365 Lys Ile Thr Ala Ser Tyr Glu Asp Arg Val Thr Phe Leu Pro Thr Gly 370 375 380 Ile Thr Phe Lys Ser Val Thr Arg Glu Asp Thr Gly Thr Tyr Thr Cys 385 390 395 400 Met Val Ser Glu Glu Gly Gly Asn Ser Tyr Gly Glu Val Lys Val Lys 405 410 415 Leu Ile Val Leu Val Pro Pro Ser Lys Pro Thr Val Asn Ile Pro Ser 420 425 430 Ser Ala Thr Ile Gly Asn Arg Ala Val Leu Thr Cys Ser Glu Gln Asp 435 440 445 Gly Ser Pro Pro Ser Glu Tyr Thr Trp Phe Lys Asp Gly Ile Val Met 450 455 460 Pro Thr Asn Pro Lys Ser Thr Arg Ala Phe Ser Asn Ser Ser Tyr Val 465 470 475 480 Leu Asn Pro Thr Thr Gly Glu Leu Val Phe Asp Pro Leu Ser Ala Ser 485 490 495 Asp Thr Gly Glu Tyr Ser Cys Glu Ala Arg Asn Gly Tyr Gly Thr Pro 500 505 510 Met Thr Ser Asn Ala Val Arg Met Glu Ala Val Glu Arg Asn Val Gly 515 520 525 Val Ala Cys Glu Gln Asn Pro Ile Tyr Trp Ala Arg Tyr Ala Asp Trp 530 535 540 Leu Phe Thr Thr Pro Leu Leu Leu Leu Asp Leu Ala Leu Leu Val Asp 545 550 555 560 Ala Asp Glu Gly Thr Gly 565
[0109] The modularity of fusion protein described herein can be achieved by exchanging CM19XA within the plasmid that expresses the protein in a bacterial host. This process is called sub-cloning. Using Restriction Enzymes Ndel and Xhol CM19XA can be substituted by CM19XB, CM19XC or CM19X4 where XA corresponds to JAM-A, XB corresponds to JAM-B, XC corresponds to JAM-C, and X4 corresponds to JAM-4.
[0110] A nucleic acid sequence useful for expressing a metastasis inhibiting fusion protein for encoding CM19XA: CD19-JAM A-pHLIP is as follows (SEQ ID NO: 3):
TABLE-US-00003 1 gaaaacctgt atttccaggg gcccgaggaa cccctggtgg tgaaagtcga ggagggcgat 60 aacgctgtcc tgcaatgcct taagggaacg tctgacggcc ccacacaaca attaacatgg 120 tctcgcgaat cccccttgaa gccctttttg aaactgtcat taggcttgcc cggtcttggg 180 atccacatgc gtccattagc gatttggctt ttcatcttca atgtctcgca acaaatgggc 240 ggtttctacc tttgtcaacc tggaccccct agtgaaaaag cgtggcaacc cgggtggact 300 gtcaatgtcg aaggatctgg cgagcttttc cgttggaacg taagtgactt aggtggactg 360 ggctgcggtc ttaaaaatcg ctccagcgag ggcccaagta gtccatctgg caaactgatg 420 tcgccaaagc tttatgtttg ggcaaaagat cgcccagaaa tttgggaagg tgagccgccc 480 tgcttaccac cccgtgattc tttgaaccaa tcacttagcc aggacttaac tatggcacca 540 gggagtacgc tttggttgag ttgcggcgtt cctcctgatt cagtctcccg cggccctctg 600 tcttggacgc acgtccatcc aaagggcccg aagtccctgt taagccttga gttgaaagat 660 gaccgccctg ctcgcgatat gtgggtcatg gaaacggggt tgcttttacc gcgtgccaca 720 gcgcaagatg cgggaaaata ttactgccac cgcggaaatt taacgatgtc cttccatttg 780 gagatcaccg cccgtccggt attgtggcac tggctgctgc gcacaggggg ctggaaaggg 840 ggatccggtg ggtctggagg aagtggcgga agtggtggat ctggcggtag ttccgtgacg 900 gtccactcat ctgagccgga agttcgcatt cctgaaaaca accccgtaaa actgagttgc 960 gcctattcag ggttttcatc acctcgcgtc gaatggaaat tcgatcaagg tgacaccact 1020 gcttagtgt gttataacaa caaaatcacg gcgtcatacg aggatcgcgt tactttctta 1080 ccaacaggca tcacctttaa atctgtaaca cgcgaggata caggaaccta tacttgtatg 1140 gtttcggagg agggtgggaa ttcgtacggc gaggtaaaag tcaaattgat tgtgttagtc 1200 ccgccttcaa agcccacggt taatattccc tcgtctgcta caattggtaa ccgcgccgtt 1260 cttacatgct ccgaacaaga tggtagtccg ccctccgaat atacatggtt caaggacggc 1320 atcgtaatgc caacaaatcc gaaaagtaca cgcgctttca gcaattcgtc atacgtctta 1380 aatcccacca ccggcgaatt ggtcttcgat ccactttcag cctctgacac tggtgagtac 1440 tcatgcgagg ctcgtaatgg ctatggtacg ccaatgacaa gtaacgctgt acgcatggag 1500 gcggtcgaac gcaacgttgg agttgcctgt gagcagaatc ccatctactg ggcgcgctat 1560 gcggactggt tattcacgac acccttactg ctgttggact tagcccttct tgttgacgcc 1620 gatgagggaa ctgggtgatg a
[0111] The translation product from the encoding nucleic acid SEQ ID NO: 3 is SEQ ID NO. 4 (CD19-JAM A-pHLIP):
TABLE-US-00004 Glu Asn Leu Tyr Phe Gln Gly Pro Glu Glu Pro Leu Val Val Lys Val 1 5 10 15 Glu Glu Gly Asp Asn Ala Val Leu Gln Cys Leu Lys Gly Thr Ser Asp 20 25 30 Gly Pro Thr Gln Gln Leu Thr Trp Ser Arg Glu Ser Pro Leu Lys Pro 35 40 45 Phe Leu Lys Leu Ser Leu Gly Leu Pro Gly Leu Gly Ile His Met Arg 50 55 60 Pro Leu Ala Ile Trp Leu Phe Ile Phe Asn Val Ser Gln Gln Met Gly 65 70 75 80 Gly Phe Tyr Leu Cys Gln Pro Gly Pro Pro Ser Glu Lys Ala Trp Gln 85 90 95 Pro Gly Trp Thr Val Asn Val Glu Gly Ser Gly Glu Leu Phe Arg Trp 100 105 110 Asn Val Ser Asp Leu Gly Gly Leu Gly Cys Gly Leu Lys Asn Arg Ser 115 120 125 Ser Glu Gly Pro Ser Ser Pro Ser Gly Lys Leu Met Ser Pro Lys Leu 130 135 140 Tyr Val Trp Ala Lys Asp Arg Pro Glu Ile Trp Glu Gly Glu Pro Pro 145 150 155 160 Cys Leu Pro Pro Arg Asp Ser Leu Asn Gln Ser Leu Ser Gln Asp Leu 165 170 175 Thr Met Ala Pro Gly Ser Thr Leu Trp Leu Ser Cys Gly Val Pro Pro 180 185 190 Asp Ser Val Ser Arg Gly Pro Leu Ser Trp Thr His Val His Pro Lys 195 200 205 Gly Pro Lys Ser Leu Leu Ser Leu Glu Leu Lys Asp Asp Arg Pro Ala 210 215 220 Arg Asp Met Trp Val Met Glu Thr Gly Leu Leu Leu Pro Arg Ala Thr 225 230 235 240 Ala Gln Asp Ala Gly Lys Tyr Tyr Cys His Arg Gly Asn Leu Thr Met 245 250 255 Ser Phe His Leu Glu Ile Thr Ala Arg Pro Val Leu Trp His Trp Leu 260 265 270 Leu Arg Thr Gly Gly Trp Lys Gly Gly Ser Gly Gly Ser Gly Gly Ser 275 280 285 Gly Gly Ser Gly Gly Ser Gly Gly Ser Ser Val Thr Val His Ser Ser 290 295 300 Glu Pro Glu Val Arg Ile Pro Glu Asn Asn Pro Val Lys Leu Ser Cys 305 310 315 320 Ala Tyr Ser Gly Phe Ser Ser Pro Arg Val Glu Trp Lys Phe Asp Gln 325 330 335 Gly Asp Thr Thr Arg Leu Val Cys Tyr Asn Asn Lys Ile Thr Ala Ser 340 345 350 Tyr Glu Asp Arg Val Thr Phe Leu Pro Thr Gly Ile Thr Phe Lys Ser 355 360 365 Val Thr Arg Glu Asp Thr Gly Thr Tyr Thr Cys Met Val Ser Glu Glu 370 375 380 Gly Gly Asn Ser Tyr Gly Glu Val Lys Val Lys Leu Ile Val Leu Val 385 390 395 400 Pro Pro Ser Lys Pro Thr Val Asn Ile Pro Ser Ser Ala Thr Ile Gly 405 410 415 Asn Arg Ala Val Leu Thr Cys Ser Glu Gln Asp Gly Ser Pro Pro Ser 420 425 430 Glu Tyr Thr Trp Phe Lys Asp Gly Ile Val Met Pro Thr Asn Pro Lys 435 440 445 Ser Thr Arg Ala Phe Ser Asn Ser Ser Tyr Val Leu Asn Pro Thr Thr 450 455 460 Gly Glu Leu Val Phe Asp Pro Leu Ser Ala Ser Asp Thr Gly Glu Tyr 465 470 475 480 Ser Cys Glu Ala Arg Asn Gly Tyr Gly Thr Pro Met Thr Ser Asn Ala 485 490 495 Val Arg Met Glu Ala Val Glu Arg Asn Val Gly Val Ala Cys Glu Gln 500 505 510 Asn Pro Ile Tyr Trp Ala Arg Tyr Ala Asp Trp Leu Phe Thr Thr Pro 515 520 525 Leu Leu Leu Leu Asp Leu Ala Leu Leu Val Asp Ala Asp Glu Gly Thr 530 535 540 Gly 545
[0112] All proteins are expressed and purified under the same directives of the protocols presented above. The production in small scale and under regular laboratories conditions demonstrate differences among the proteins in regard to yields (mg/L).
TABLE-US-00005 Biologic Name Yield (mg/L) CM19XA 1.75 CM19XB 1.40 CM19XC 1.35 CM19X4 0.99
[0113] A nucleic acid sequence useful for expressing a metastasis inhibiting fusion protein for encoding CM19XB: CD19-JAM B-pHLIP is as follows (SEQ ID NO: 5):
TABLE-US-00006 1 gaaaacctgt atttccaggg gccagaagaa ccgttagtag tgaaagtaga ggaaggtgat 60 aacgctgttc tgcaatgtct taagggtaca tccgatgggc ccactcagca gttaacttgg 120 agtcgtgagt caccccttaa gccctttttg aagctttccc ttggcttacc tggactggga 180 atccacatgc gccctttggc aatctggctg tttattttta acgtctcaca gcaaatgggg 240 ggattctatt tgtgccaacc tgggcccccg agtgagaaag cgtggcaacc aggttggacc 300 gtgaacgttg aaggttcagg tgagttattc cgctggaacg tgtccgacct tggaggctta 360 ggttgtggct taaagaaccg ttcatcagag gggccctcca gccccagtgg taagctgatg 420 agtccaaagc tgtacgtgtg ggctaaagat cgtcccgaaa tctgggaagg ggaaccaccg 480 tgtctgcctc ctcgtgacag tttaaaccag tcgctgtcac aggaccttac catggcccct 540 gggtccacct tatggctgag ttgcggcgtt ccaccggatt cggtttcacg cggccctctg 600 agttggactc acgtccaccc taaggggccg aaaagcttgt tatcgttgga gctgaaagac 660 gaccgcccgg ctcgtgatat gtgggtaatg gagacaggat tacttttgcc tcgcgcaact 720 gcacaagatg cgggtaagta ttactgccac cgtgggaact tgaccatgag cttccacttg 780 gagattaccg cacgcccggt tttatggcac tggttgttac gtaccggtgg ctggaagggt 840 ggatcgggcg gctctggggg gagcggcgga tcaggaggta gcgggggtag tttctccgcg 900 ccgaaagatc agcaagtagt cactgccgta gaatatcagg aggcgattct ggcgtgtaaa 960 acgcctaaaa agaccgtctc gtcacgtctt gagtggaaga aactgggacg ttctgtttcc 1020 tttgtttact atcaacagac gttgcagggt gatttcaaaa atcgtgctga gatgattgat 1080 ttcaacatcc gtattaagaa cgtcactcgc tctgatgcag ggaaataccg ttgcgaagta 1140 agcgcacctt cggaacaggg ccagaattta gaggaagata cggtgacctt ggaggtgttg 1200 gtagctccgg cagtcccgtc ctgcgaagta ccgagttctg ccctgtcggg gactgttgta 1260 gagcttcgtt gccaagacaa ggaagggaat cctgctccgg aatacacctg gttcaaggat 1320 ggcatccgtc ttctggaaaa cccgcgcctt ggtagccaaa gcacaaactc ctcctacacc 1380 atgaatacta agactggtac gctgcagttc aataccgtga gcaagctgga caccggcgaa 1440 tattcttgtg aggcacgcaa cagcgtcggg tatcgtcgtt gccccggtaa acgcatgcaa 1500 gtagatgact tgaacatttc cgcatgcgag cagaatccca tctactgggc gcgttacgcc 1560 gattggttgt tcacgacgcc gttgctgtta cttgatcttg cgttactggt ggatgcagat 1620 gaaggaacag ggtga
[0114] The translation product from the encoding nucleic acid SEQ ID NO: 5 is SEQ ID NO. 6 (CD19-JAM B-pHLIP):
TABLE-US-00007 Glu Asn Leu Tyr Phe Gln Gly Pro Glu Glu Pro Leu Val Val Lys Val 1 5 10 15 Glu Glu Gly Asp Asn Ala Val Leu Gln Cys Leu Lys Gly Thr Ser Asp 20 25 30 Gly Pro Thr Gln Gln Leu Thr Trp Ser Arg Glu Ser Pro Leu Lys Pro 35 40 45 Phe Leu Lys Leu Ser Leu Gly Leu Pro Gly Leu Gly Ile His Met Arg 50 55 60 Pro Leu Ala Ile Trp Leu Phe Ile Phe Asn Val Ser Gln Gln Met Gly 65 70 75 80 Gly Phe Tyr Leu Cys Gln Pro Gly Pro Pro Ser Glu Lys Ala Trp Gln 85 90 95 Pro Gly Trp Thr Val Asn Val Glu Gly Ser Gly Glu Leu Phe Arg Trp 100 105 110 Asn Val Ser Asp Leu Gly Gly Leu Gly Cys Gly Leu Lys Asn Arg Ser 115 120 125 Ser Glu Gly Pro Ser Ser Pro Ser Gly Lys Leu Met Ser Pro Lys Leu 130 135 140 Tyr Val Trp Ala Lys Asp Arg Pro Glu Ile Trp Glu Gly Glu Pro Pro 145 150 155 160 Cys Leu Pro Pro Arg Asp Ser Leu Asn Gln Ser Leu Ser Gln Asp Leu 165 170 175 Thr Met Ala Pro Gly Ser Thr Leu Trp Leu Ser Cys Gly Val Pro Pro 180 185 190 Asp Ser Val Ser Arg Gly Pro Leu Ser Trp Thr His Val His Pro Lys 195 200 205 Gly Pro Lys Ser Leu Leu Ser Leu Glu Leu Lys Asp Asp Arg Pro Ala 210 215 220 Arg Asp Met Trp Val Met Glu Thr Gly Leu Leu Leu Pro Arg Ala Thr 225 230 235 240 Ala Gln Asp Ala Gly Lys Tyr Tyr Cys His Arg Gly Asn Leu Thr Met 245 250 255 Ser Phe His Leu Glu Ile Thr Ala Arg Pro Val Leu Trp His Trp Leu 260 265 270 Leu Arg Thr Gly Gly Trp Lys Gly Gly Ser Gly Gly Ser Gly Gly Ser 275 280 285 Gly Gly Ser Gly Gly Ser Gly Gly Ser Phe Ser Ala Pro Lys Asp Gln 290 295 300 Gln Val Val Thr Ala Val Glu Tyr Gln Glu Ala Ile Leu Ala Cys Lys 305 310 315 320 Thr Pro Lys Lys Thr Val Ser Ser Arg Leu Glu Trp Lys Lys Leu Gly 325 330 335 Arg Ser Val Ser Phe Val Tyr Tyr Gln Gln Thr Leu Gln Gly Asp Phe 340 345 350 Lys Asn Arg Ala Glu Met Ile Asp Phe Asn Ile Arg Ile Lys Asn Val 355 360 365 Thr Arg Ser Asp Ala Gly Lys Tyr Arg Cys Glu Val Ser Ala Pro Ser 370 375 380 Glu Gln Gly Gln Asn Leu Glu Glu Asp Thr Val Thr Leu Glu Val Leu 385 390 395 400 Val Ala Pro Ala Val Pro Ser Cys Glu Val Pro Ser Ser Ala Leu Ser 405 410 415 Gly Thr Val Val Glu Leu Arg Cys Gln Asp Lys Glu Gly Asn Pro Ala 420 425 430 Pro Glu Tyr Thr Trp Phe Lys Asp Gly Ile Arg Leu Leu Glu Asn Pro 435 440 445 Arg Leu Gly Ser Gln Ser Thr Asn Ser Ser Tyr Thr Met Asn Thr Lys 450 455 460 Thr Gly Thr Leu Gln Phe Asn Thr Val Ser Lys Leu Asp Thr Gly Glu 465 470 475 480 Tyr Ser Cys Glu Ala Arg Asn Ser Val Gly Tyr Arg Arg Cys Pro Gly 485 490 495 Lys Arg Met Gln Val Asp Asp Leu Asn Ile Ser Ala Cys Glu Gln Asn 500 505 510 Pro Ile Tyr Trp Ala Arg Tyr Ala Asp Trp Leu Phe Thr Thr Pro Leu 515 520 525 Leu Leu Leu Asp Leu Ala Leu Leu Val Asp Ala Asp Glu Gly Thr Gly 530 535 540
[0115] A nucleic acid sequence useful for expressing a metastasis inhibiting fusion protein for encoding CM19XC: CD19-JAM C-pHLIP is as follows (SEQ ID NO: 7):
TABLE-US-00008 1 gaaaacctgt atttccaggg gcccgaagaa ccccttgtag ttaaagtaga agagggtgac 60 aatgccgttc ttcagtgttt aaaaggcaca tcagacgggc ccacacagca gttgacatgg 120 agccgtgaat cccccttgaa gccattttta aagctgtcct tagggttacc ggggttaggt 180 atccacatgc gcccccttgc tatctggctt tttatcttta acgtatctca gcagatgggg 240 ggcttctacc tttgccagcc gggtccccct tcagagaaag cctggcagcc gggctggaca 300 gtcaatgtgg aaggcagcgg cgagttgttt cgctggaatg tctcagatct tgggggcttg 360 gggtgtggcc ttaaaaatcg ctcttcggag ggaccctcaa gcccgagtgg aaaacttatg 420 tcgcctaagc tttacgtatg ggctaaggac cgccctgaga tttgggaggg agaaccccct 480 tgtttacctc cccgtgattc gttgaaccaa tctttatccc aggatttaac tatggcgcca 540 ggatcaactt tatggctgag ctgcggggtg ccccctgact cagtgtcccg cgggccttta 600 agttggacgc atgtgcaccc taaggggcca aaatcgctgc tgagtttgga gcttaaggat 660 gatcgcccag cgcgtgatat gtgggtaatg gaaactgggt tgctgttgcc ccgtgcgacc 720 gctcaggatg ccgggaagta ttattgtcac cgcggcaacc ttaccatgtc atttcatttg 780 gaaatcaccg cccgcccagt tttgtggcat tggcttttgc gcactggcgg gtggaaaggc 840 ggttcaggag gcagcggcgg tagcggtggt agcggaggtt caggcgggtc ggtaaatctg 900 aaatcatcga atcgcactcc tgtagttcaa gagtttgaga gcgttgagtt aagctgcatt 960 attacggata gtcagacatc agatcctcgt atcgagtgga aaaagattca ggacgagcaa 1020 actacttacg tcttcttcga caacaaaatt cagggcgact tggctggccg cgcagagatt 1080 ctgggcaaaa ctagccttaa gatctggaac gtcacgcgcc gtgacagtgc attgtaccgc 1140 tgtgaagtgg tggcccgtaa cgaccgcaag gagatcgatg agattgttat tgaattgaca 1200 gttcaggtga agccagtaac cccagtgtgc cgtgtcccaa aggccgtacc ggttggtaaa 1260 atggcaactt tgcattgcca ggagtcagaa ggtcatccgc gcccacacta ttcgtggtat 1320 cgtaatgacg tacccttacc cactgattca cgcgctaatc ctcgcttccg caactcaagt 1380 ttccacttaa attccgaaac tggtacatta gtattcaccg ctgtccacaa ggacgactcg 1440 ggtcaatatt actgtattgc atctaatgac gccggatctg cacgttgcga agagcaggag 1500 atggaagtct acgatttaaa tgcttgtgaa caaaatccaa tttattgggc gcgctatgcc 1560 gattggttgt ttacaacgcc gttactgtta ttggatttag ctttacttgt agacgccgat 1620 gagggaacag gatga
[0116] The translation product from the encoding nucleic acid SEQ ID NO: 7 is SEQ ID NO. 8 (CD19-JAM C-pHLIP):
TABLE-US-00009 Glu Asn Leu Tyr Phe Gln Gly Pro Glu Glu Pro Leu Val Val Lys Val 1 5 10 15 Glu Glu Gly Asp Asn Ala Val Leu Gln Cys Leu Lys Gly Thr Ser Asp 20 25 30 Gly Pro Thr Gln Gln Leu Thr Trp Ser Arg Glu Ser Pro Leu Lys Pro 35 40 45 Phe Leu Lys Leu Ser Leu Gly Leu Pro Gly Leu Gly Ile His Met Arg 50 55 60 Pro Leu Ala Ile Trp Leu Phe Ile Phe Asn Val Ser Gln Gln Met Gly 65 70 75 80 Gly Phe Tyr Leu Cys Gln Pro Gly Pro Pro Ser Glu Lys Ala Trp Gln 85 90 95 Pro Gly Trp Thr Val Asn Val Glu Gly Ser Gly Glu Leu Phe Arg Trp 100 105 110 Asn Val Ser Asp Leu Gly Gly Leu Gly Cys Gly Leu Lys Asn Arg Ser 115 120 125 Ser Glu Gly Pro Ser Ser Pro Ser Gly Lys Leu Met Ser Pro Lys Leu 130 135 140 Tyr Val Trp Ala Lys Asp Arg Pro Glu Ile Trp Glu Gly Glu Pro Pro 145 150 155 160 Cys Leu Pro Pro Arg Asp Ser Leu Asn Gln Ser Leu Ser Gln Asp Leu 165 170 175 Thr Met Ala Pro Gly Ser Thr Leu Trp Leu Ser Cys Gly Val Pro Pro 180 185 190 Asp Ser Val Ser Arg Gly Pro Leu Ser Trp Thr His Val His Pro Lys 195 200 205 Gly Pro Lys Ser Leu Leu Ser Leu Glu Leu Lys Asp Asp Arg Pro Ala 210 215 220 Arg Asp Met Trp Val Met Glu Thr Gly Leu Leu Leu Pro Arg Ala Thr 225 230 235 240 Ala Gln Asp Ala Gly Lys Tyr Tyr Cys His Arg Gly Asn Leu Thr Met 245 250 255 Ser Phe His Leu Glu Ile Thr Ala Arg Pro Val Leu Trp His Trp Leu 260 265 270 Leu Arg Thr Gly Gly Trp Lys Gly Gly Ser Gly Gly Ser Gly Gly Ser 275 280 285 Gly Gly Ser Gly Gly Ser Gly Gly Ser Val Asn Leu Lys Ser Ser Asn 290 295 300 Arg Thr Pro Val Val Gln Glu Phe Glu Ser Val Glu Leu Ser Cys Ile 305 310 315 320 Ile Thr Asp Ser Gln Thr Ser Asp Pro Arg Ile Glu Trp Lys Lys Ile 325 330 335 Gln Asp Glu Gln Thr Thr Tyr Val Phe Phe Asp Asn Lys Ile Gln Gly 340 345 350 Asp Leu Ala Gly Arg Ala Glu Ile Leu Gly Lys Thr Ser Leu Lys Ile 355 360 365 Trp Asn Val Thr Arg Arg Asp Ser Ala Leu Tyr Arg Cys Glu Val Val 370 375 380 Ala Arg Asn Asp Arg Lys Glu Ile Asp Glu Ile Val Ile Glu Leu Thr 385 390 395 400 Val Gln Val Lys Pro Val Thr Pro Val Cys Arg Val Pro Lys Ala Val 405 410 415 Pro Val Gly Lys Met Ala Thr Leu His Cys Gln Glu Ser Glu Gly His 420 425 430 Pro Arg Pro His Tyr Ser Trp Tyr Arg Asn Asp Val Pro Leu Pro Thr 435 440 445 Asp Ser Arg Ala Asn Pro Arg Phe Arg Asn Ser Ser Phe His Leu Asn 450 455 460 Ser Glu Thr Gly Thr Leu Val Phe Thr Ala Val His Lys Asp Asp Ser 465 470 475 480 Gly Gln Tyr Tyr Cys Ile Ala Ser Asn Asp Ala Gly Ser Ala Arg Cys 485 490 495 Glu Glu Gln Glu Met Glu Val Tyr Asp Leu Asn Ala Cys Glu Gln Asn 500 505 510 Pro Ile Tyr Trp Ala Arg Tyr Ala Asp Trp Leu Phe Thr Thr Pro Leu 515 520 525 Leu Leu Leu Asp Leu Ala Leu Leu Val Asp Ala Asp Glu Gly Thr Gly 530 535 540
[0117] A nucleic acid sequence useful for expressing a metastasis inhibiting fusion protein for encoding CM19X4: CD19-JAM 4-pHLIP is as follows (SEQ ID NO: 9):
TABLE-US-00010 1 gaaaacctgt atttccaggg gccagaggaa ccattagtgg ttaaggtaga ggaaggcgat 60 aatgcagtct tacagtgtct taaaggaact tcagacggcc cgacccaaca gctgacttgg 120 tctcgtgaaa gcccgttaaa acccttcctt aagctgagcc tgggtttgcc tggtttagga 180 attcacatgc gtccccttgc gatctggctg tttattttta atgtgtctca gcaaatgggc 240 gggttttact tgtgtcagcc agggccccca tcggagaagg cttggcaacc cggctggacc 300 gtgaacgtcg agggtagtgg ggaacttttc cgctggaacg tttccgattt aggcggtctt 360 ggctgcggcc ttaagaatcg ttcttcggaa gggccgagtt ccccgtctgg aaagctgatg 420 tcacctaagt tatatgtttg ggccaaggat cgtccagaga tttgggaggg cgagcccccc 480 tgtctgccgc cacgtgacag cctgaaccag agtttgagcc aggatcttac gatggcccct 540 gggtcgactc tttggttatc gtgcggggtt ccacccgact cggtttcacg cggcccctta 600 tcgtggaccc acgtacatcc aaaggggccg aaatcgttat tgagcttgga attaaaagat 660 gaccgtcctg ctcgcgacat gtgggtaatg gagaccgggc tgctgttacc gcgtgcgact 720 gctcaagatg ctggcaaata ctattgccac cgtggaaact tgactatgag ctttcacctg 780 gaaatcacag ctcgccccgt tttatggcac tggttgttac gcacgggcgg ttggaagggg 840 ggctcaggag gtagcggcgg gtcaggtgga tcgggaggtt ccggcgggag tatgggacag 900 aaagaacgtt caacagccga tacactgcca gatttggagg agtggaagag cgcagctggc 960 cttcgttggt ggcagacagc cgttgtggat ggttctgggt cagggaatga ggtgattgag 1020 ggaccgcaga atgcacgtgt attgaagggt tcccaggctc gctttaactg caccgtgagc 1080 cagggctgga agctgattat gtgggcactg agcgacatgg tggttctttc agttcgccca 1140 atggagccta tcatcacgaa tgaccgcttc actagtcagc gctatgacca agggggaaac 1200 ttcactagcg agatgatcat ccacaatgtc gagccctctg atagcggaaa tatccgttgt 1260 tcactgcaga attcgcgtct tcacgggtct gcgtacctta ccgtccaggt catgggagag 1320 ttatttatcc caagcgtaaa tttggtggta gctgagaatg agccctgtga ggtgacttgt 1380 ctgccctctc attggacccg cttgcccgac atttcatggg aattaggctt gttggtctca 1440 cactcgtctt attactttgt accggaaccc tctgatttgc aatcagcagt ctcaattctg 1500 gctctgactc ctcaatcaaa cggtacgctt acgtgtgttg cgacatggaa aagtctgaaa 1560 gcgcgtaaat ccgcgacagt caatcttact gttattcgct gtccacaaga cacgggtgga 1620 gggattaata tcccaggagt attgtcctct ttaccgtcgc tggggttcag tcttccgaca 1680 tgggggaagg catgcgaaca aaatccaatt tattgggcgc gttatgctga ttggttattt 1740 acaaccccac tgttactgct tgatttggca ctgcttgttg acgctgacga gggcaccggc 1800 tga
[0118] The translation product from the encoding nucleic acid SEQ ID NO: 9 is SEQ ID NO. 10 (CD19-JAM 4-pHLIP):
TABLE-US-00011 Glu Asn Leu Tyr Phe Gln Gly Pro Glu Glu Pro Leu Val Val Lys Val 1 5 10 15 Glu Glu Gly Asp Asn Ala Val Leu Gln Cys Leu Lys Gly Thr Ser Asp 20 25 30 Gly Pro Thr Gln Gln Leu Thr Trp Ser Arg Glu Ser Pro Leu Lys Pro 35 40 45 Phe Leu Lys Leu Ser Leu Gly Leu Pro Gly Leu Gly Ile His Met Arg 50 55 60 Pro Leu Ala Ile Trp Leu Phe Ile Phe Asn Val Ser Gln Gln Met Gly 65 70 75 80 Gly Phe Tyr Leu Cys Gln Pro Gly Pro Pro Ser Glu Lys Ala Trp Gln 85 90 95 Pro Gly Trp Thr Val Asn Val Glu Gly Ser Gly Glu Leu Phe Arg Trp 100 105 110 Asn Val Ser Asp Leu Gly Gly Leu Gly Cys Gly Leu Lys Asn Arg Ser 115 120 125 Ser Glu Gly Pro Ser Ser Pro Ser Gly Lys Leu Met Ser Pro Lys Leu 130 135 140 Tyr Val Trp Ala Lys Asp Arg Pro Glu Ile Trp Glu Gly Glu Pro Pro 145 150 155 160 Cys Leu Pro Pro Arg Asp Ser Leu Asn Gln Ser Leu Ser Gln Asp Leu 165 170 175 Th Met Ala Pro Gly Ser Thr Leu Trp Leu Ser Cys Gly Val Pro Pro 180 185 190 Asp Ser Val Ser Arg Gly Pro Leu Ser Trp Thr His Val His Pro Lys 195 200 205 Gly Pro Lys Ser Leu Leu Ser Leu Glu Leu Lys Asp Asp Arg Pro Ala 210 215 220 Arg Asp Met Trp Val Met Glu Thr Gly Leu Leu Leu Pro Arg Ala Thr 225 230 235 240 Ala Gln Asp Ala Gly Lys Tyr Tyr Cys His Arg Gly Asn Leu Thr Met 245 250 255 Ser Phe His Leu Glu Ile Thr Ala Arg Pro Val Leu Trp His Trp Leu 260 265 270 Leu Arg Thr Gly Gly Trp Lys Gly Gly Ser Gly Gly Ser Gly Gly Ser 275 280 285 Gly Gly Ser Gly Gly Ser Gly Gly Ser Met Gly Gln Lys Glu Arg Ser 290 295 300 Thr Ala Asp Thr Leu Pro Asp Leu Glu Glu Trp Lys Ser Ala Ala Gly 305 310 315 320 Leu Arg Trp Trp Gln Thr Ala Val Val Asp Gly Ser Gly Ser Gly Asn 325 330 335 Glu Val Ile Glu Gly Pro Gln Asn Ala Arg Val Leu Lys Gly Ser Gln 340 345 350 Ala Arg Phe Asn Cys Thr Val Ser Gln Gly Trp Lys Leu Ile Met Trp 355 360 365 Ala Leu Ser Asp Met Val Val Leu Ser Val Arg Pro Met Glu Pro Ile 370 375 380 Ile Thr Asn Asp Arg Phe Thr Ser Gln Arg Tyr Asp Gln Gly Gly Asn 385 390 395 400 Phe Thr Ser Glu Met Ile Ile His Asn Val Glu Pro Ser Asp Ser Gly 405 410 415 Asn Ile Arg Cys Ser Leu Gln Asn Ser Arg Leu His Gly Ser Ala Tyr 420 425 430 Leu Thr Val Gln Val Met Gly Glu Leu Phe Ile Pro Ser Val Asn Leu 435 440 445 Val Val Ala Glu Asn Glu Pro Cys Glu Val Thr Cys Leu Pro Ser His 450 455 460 Trp Thr Arg Leu Pro Asp Ile Ser Trp Glu Leu Gly Leu Leu Val Ser 465 470 475 480 His Ser Ser Tyr Tyr Phe Val Pro Glu Pro Ser Asp Leu Gln Ser Ala 485 490 495 Val Ser Ile Leu Ala Leu Thr Pro Gln Ser Asn Gly Thr Leu Thr Cys 500 505 510 Val Ala Thr Trp Lys Ser Leu Lys Ala Arg Lys Ser Ala Thr Val Asn 515 520 525 Leu Thr Val Ile Arg Cys Pro Gln Asp Thr Gly Gly Gly Ile Asn Ile 530 535 540 Pro Gly Val Leu Ser Ser Leu Pro Ser Leu Gly Phe Ser Leu Pro Thr 545 550 555 560 Trp Gly Lys Ala Cys Glu Gln Asn Pro Ile Tyr Trp Ala Arg Tyr Ala 565 570 575 Asp Trp Leu Phe Thr Thr Pro Leu Leu Leu Leu Asp Leu Ala Leu Leu 580 585 590 Val Asp Ala Asp Glu Gly Thr Gly 595 600