SPECIFIC MONOCLONAL ANTIBODIES OF THE ANTIGEN M OF THE HUMAN METAPNEUMOVIRUS (HMPV) AND USE THEREOF IN A DIAGNOSTIC METHOD
20170343546 · 2017-11-30
Inventors
- Susan Marcela Bueno Ramirez (Santiago, CL)
- Alexis Mikes Kalergis Parra (Santiago, CL)
- Jorge Eugenio Mora Alarcon (Santiago, CL)
Cpc classification
C07K16/1027
CHEMISTRY; METALLURGY
C07K2317/14
CHEMISTRY; METALLURGY
International classification
Abstract
The invention relates to murine monoclonal antibodies corresponding to monoclonal antibodies secreted by cell lines of hybridomas denominated 3G8/C11 and 7G4/A12, and which react against the antigen M of hMPV. Said antibodies do not compete with each other for the binding site for binding to the antigen, nor do they impede the simultaneous binding thereof to the antigen. Said monoclonal antibodies can be used for tests for the detection, diagnosis and/or determination of infection by hMPV.
Claims
1. Monoclonal antibody or a fragment thereof which binds to the M-protein of respiratory virus human Metapneumovirus (hMPV), wherein it comprises a heavy chain variable region having a sequence with at least 90%, 95% or 99% identity to SEQ ID NO: 1 or SEQ ID NO: 5 and a light chain variable region having a sequence with at least 90%, 95% or 99% identity to SEQ ID NO: 2 or SEQ ID NO: 6.
2. Monoclonal antibody or a fragment thereof which binds to the M-protein of respiratory virus human Metapneumovirus (hMPV) according to claim 1, wherein the antibody or fragment is further bound to a marker selected from the group consisting of fluorophores, biotin, radioisotopes, metals and enzymes
3. Set of nucleotide sequences encoding a monoclonal antibody or a fragment thereof that binds to the M-protein of respiratory virus human Metapneumovirus (hMPV) according to claim 1, wherein it comprises a nucleotide sequence with at least one 80%, 85%, 90%, 95% and 99% identity to SEQ ID NO: 3, or SEQ ID NO: 7 and its reverse complementary, which encodes the antibody heavy chain variable region and comprises a nucleotide sequence having at least 80%, 85%, 90%, 95% and 99% identity to SEQ ID NO: 4 or SEQ ID NO: 8 and its reverse complementary, which encodes the antibody light chain variable region.
4. In vitro and/or ex vivo diagnostic method for hMPV infection in a biological sample, wherein the method comprises contacting the biological sample with the monoclonal antibody against hMPV or a fragment thereof according to claim 1 and detecting antibody binding to antigen.
5. In vitro and/or ex vivo diagnostic method according to claim 4, wherein the biological sample is selected from the group consisting of in vitro hMPV-infected cells, nasal secretions, nasal washes, pharyngeal secretions and/or bronchial secretions or washings.
6. In vitro and/or ex vivo diagnostic method according to claim 4, wherein the technique used corresponds to ELISA, immunofluorescence, immunohistochemistry, immunochromatography, flow cytometry, cellsorter, immunoprecipitation and/or Western blotting.
7. In vitro and/or ex vivo diagnostic method according to claim 4, wherein the antibody or fragment thereof according to claim 1 or 2 is conjugated to a marker allowing its detection.
8. In vitro and/or ex vivo diagnostic method according to claim 7, wherein the antibody is bound to a marker selected from the group consisting of fluorophores, biotin, radioisotopes, metals and enzymes.
9. A diagnostic kit for detecting hMPV, wherein it comprises the monoclonal antibody against hMPV according to claim 1.
10. Diagnostic kit according to claim 9, wherein the antibody is attached to a solid support.
11. Diagnostic kit according to claim 10, wherein the solid support is a membrane formed by one of the compounds selected from the group consisting of nitrocellulose, cellulose, polyethylene and nylon.
12. Diagnostic kit according to claim 9, wherein it corresponds to an immunochromatographic test, luminex, flow cytometry, immunofluorescence, radioimmunoassay, Western blot, Dot plot, ELISA, immunodiffusion or immunoprecipitation.
Description
DESCRIPTION OF THE FIGURES
[0008]
[0009]
[0010]
[0011]
[0012]
[0013]
DETAILED DESCRIPTION OF THE INVENTION
[0014] The present invention relates to two isotype IgG2a monoclonal antibodies or fragments thereof, which specifically recognize the M-protein (also herein referred as anti-M antibodies) of human Metapneumovirus (hMPV).
[0015] A monoclonal antibody is a type of homogeneous antibody characterized by specifically recognizing a single antigen. They are produced by a single hybrid cell (hybridoma), which is the product of the fusion of a B lymphocyte clone and a tumor plasma cell. The property of binding specifically and with high affinity to an antigen has promoted the development of monoclonal antibodies as a tool of great utility for the detection of molecules that generate a great scientific and clinical interest and which are of industrial use. At present, monoclonal antibodies are widely used, both in basic and applied research, due to their specificity and reproducibility, which allows a better support for research. However, the biomedical area is where monoclonal antibodies have had enormous practical applications, either for diagnosis and treatment of multiple infectious diseases, and as therapy for other pathologies. While monoclonal antibodies are used in all types of detection and diagnosis techniques, the best results have been obtained in designing in vitro diagnostic kits. For this, there are currently available several rapid detection kits, such as pregnancy tests, which is based on the determination of human chorionic gonadotropin (hCG) levels in urine using anti-hCG antibody. In addition, monoclonal antibodies for therapeutic use have become highly relevant. Currently, there are therapeutic treatments for various pathologies using commercial monoclonal antibodies such as Alemtuzumad, Gemtuzumab ozogamicin, Rituximab, Trastumab, among others.
[0016] The inventors of the present invention have developed two monoclonal antibodies that specifically recognize the M protein of hMPV. As indicated above, these antibodies are produced by hybridomas 3G8/C11 and 7G4/A12. The variable region amino acid sequences of both chains of the antibody produced by hybridoma 3G8/C11 are set forth in SEQ ID NO: 1 for the heavy chain and SEQ ID NO: 2 for the light chain. The nucleotide sequences encoding the same are set forth in SEQ ID NO: 3 and SEQ ID NO: 4, respectively. Similarly, the variable region amino acid sequences of both chains of the antibody produced by hybridoma 7G4/A12 are set forth in SEQ ID NO: 5 for the heavy chain and SEQ ID NO: 6 for the light chain. The nucleotide sequences encoding the same are set forth in SEQ ID NO: 7 and SEQ ID NO: 8, respectively.
[0017] A skilled artisan starting from these variable sequences could construct chimeric antibodies comprising the same, including either only one variable region or combining them using all possible combinations. All such embodiments are within the scope of the present invention. That is, the present invention includes antibodies comprising at least one of the sequences SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 5 and SEQ ID NO: 6 and similar sequences with up to 90%, 95% or 99% homology or identity to any of said amino acid sequences. As well as the nucleotide sequences comprising at least one of the sequences SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 7 and SEQ ID NO: 8, and their reverse complementary and similar sequences with up to 80%, 85%, 90%, 95% and 99% homology or identity to any of said nucleotide sequences. The highest degree of homology considered in the nucleotide sequences is based on the degeneracy of the genetic code. Thus, the present invention also includes a set of nucleotide sequences encoding a monoclonal antibody or fragment thereof, which specifically recognizes the M-protein of hMPV.
[0018] As shown in
[0019] Examples are given below to demonstrate the different applications of monoclonal antibodies of the invention.
EXAMPLE 1
Determination of the Nucleotide Sequence Encoding Light (VL) and Heavy (VII) Chains of the Variable Region of Anti-hMPV M Antibody Secreted from Hybridoma 3G8/C11
[0020] Hybridoma 3G8/C11 was grown in DMEM-high glucose culture medium supplemented with 3.7 g/L Sodium Bicarbonate and 10% fetal bovine serum, at 37° C. with 10% CO.sub.2 up to a cell density of 700,000 cells/ml. A total RNA of 3.5 ×10.sup.6 cells was obtained by performing a treatment with the compound Trizol (Invitrogen). 0.5 μg of RNA were used to generate cDNA by reverse transcription reaction using Impron II kit (Promega). The variable region of the genes encoding immunoglobulin kappa and lambda chains was amplified by PCR. To carry on this, universal primers from Novagen Ig-Primer Set kit (Catalog No. 69831-3) were used according to the manufacturer's instructions. Light chain variable region was amplified with primers MuIgκVL5′-B: 5′ GGGAATTCATGGAGACAGACACACTCCTGCTAT3′ (SEQ ID NO: 9) y MuIgκVL5′-C: 5′ACTAGTCGACATGGAGWCAGACACACTSCTGYTATGGGT3′ (SEQ ID NO: 10) and heavy chain variable region was amplified with primers MuIgVH5′-A: 5′ GGGAATTCATGRASTTSKGGYTMARCTKGRTTT3′ (SEQ ID NO: 11) and MuIgVH5′-F: 5′ACTAGTCGACATGAACTTYGGGYTSAGMTTGRTTT3′ (SEQ ID NO: 12). PCR products were cloned into the cloning vector pTOPO-TA (Invitrogen) according to the manufacturer's instructions and sequenced by the sequencing service of the Pontificia Universidad Católica de Chile in an ABI prism 3130×1 sequencer (Applied Biosystem). The deduced amino acid sequence was obtained using the Vector NTI bioinformatic program (Invitrogen).
EXAMPLE 2
Determination of the Nucleotide Sequence Encoding Variable Light (VL) and Heavy (VII) Chains of Anti-hMPV M Antibody Secreted from Hybridoma 7G4/A12
[0021] Hybridoma 7GA/A12 was grown in DMEM-high glucose culture medium supplemented with 3, 7 g/L Sodium Bicarbonate and 10% fetal bovine serum, at 37° C. with 10% CO.sub.2 up to a cell density of 700,000 cells/ml. A total RNA of 3.5 ×10.sup.6 cells was obtained with Trizol (Invitrogen). 0.5 μg of RNA were used to generate cDNA by reverse transcription reaction using Impron II kit (Promega). The variable region of the genes encoding immunoglobulin kappa and lambda chains was amplified by PCR. To carry on this, universal primers from Novagen Ig-Primer Set kit (Catalog No. 69831-3) were used according to the manufacturer's instructions. Light chain variable region was amplified with primers MuIgκVL5′-B: 5′GGGAATTCATGGAGACAGACACACTCCTGCTAT3′ (SEQ ID NO: 9) y MuIgκVL5′-C: 5′ACTAGTCGACATGGAGWCAGACACACTSCTGYTATGGGT3′ (SEQ ID NO: 10) and heavy chain variable region was amplified with primers MuIgVH5′-A: 5′GGGAATTCATGRASTTSKGGYTMARCTKGRTTT3′ (SEQ ID NO: 11) and MuIgVH5′-F: 5′ACTAGTCGACATGAACTTYGGGYTSAGMTTGRTTT3′ (SEQ ID NO: 12). PCR products were cloned into the cloning vector pTOPO-TA (Invitrogen) according to the manufacturer's instructions and sequenced by the sequencing service of the Pontificia Universidad Católica de Chile in an ABI prism 3130×1 sequencer (Applied Biosystem). The deduced amino acid sequence was obtained using the Vector NTI bioinformatic program (Invitrogen).
EXAMPLE 3
Test for hMPV Antigen Detection, Determination of Monoclonal Anti-hMPV M Antibodies Specificity for Purified hMPV Antigens by Indirect ELISA Test
[0022] The object of this test is show the specificity of antibodies produced by hybridomas 3G8/C11 and 7G4/A12 for the hMPV M-protein. Antigen detection was performed by indirect ELISA, where the ELISA plate was activated with 50 ng of purified antigen for 1 hour at 37° C. Similarly, the plate was activated with 1×10.sup.6 plaque forming units (PFU) of hMPV. Respiratory Syncytial Virus (RSV) under the same conditions of hMPV incubation, and 50 ng BSA protein in a separate well were included as negative controls. Subsequently, the plate was washed two times with phosphate buffered saline (PBS)/0.05%Tween. The plate was then blocked for 2 hours at 37° C. with PBS/10% FBS. Washings were subsequently repeated and then each one of the antibodies (3G8/C11 and 7G4/A12) was incubated at a final concentration of 3.4 μg/ml, diluted in PBS/10% FBS for 1 hour at room temperature (each antibody in a separate plate). A control test was made in a different plate under the same conditions using a commercial monoclonal antibody recognizing the hMPV M-protein (Anti-human Metapneumovirus 75.1 antibody, clone 1B7, catalog number MAB8510, EMD Millipore) at concentration of 13.6 μg/ml. After the incubation time, washes were repeated and an anti-IgG mouse secondary antibody labeled with horseradish peroxidase enzyme (Horseradish peroxidase, HRP) at 1:2000 dilution (25 ng per well) in PBS/10% FBS was added to each of the wells for 1 hour at room temperature. Finally, washes were performed and it was developed with 50 μl of citrate buffer/Tetramethylbenzidine (TMB, 3-3′-5-5′tetramethylbenzidine, 1 mg/ml, Becton Dickinson). 50 μl of 2N H.sub.2SO.sub.4 was added to stop the reaction and the result was read in an ELISA plate reader at 450nm. To evaluate if the reaction of the secondary antibody was specific to recognize the primary antibody and if the obtained signal is not caused by nonspecific binding of the secondary antibody to the viral antigen, controls using only secondary antibody with no primary antibody and no sample were made (non-activated well). Another control to evaluate if the reaction of the primary antibody is specific for the antigen was the use of the antibodies on an ELISA plate not activated with the antigen (well with no antigen) or using the antibody on an ELISA plate having 50 ng of BSA protein or a different virus (RSV). Results show that the monoclonal antibodies of the invention are capable of recognize 50 ng of purified antigen specifically since they do not recognize BSA protein or proteins from other associated virus (
EXAMPLE 4
Test for Determination of the Sensitivity of the Monoclonal Antibodies for Viral Antigen Detection
[0023] The test was performed for the determination of the highest virus and protein dilution detectable by monoclonal anti-hMPV M antibodies from hybridomas 3G8/C11 and 7G4/A12, this was made by indirect ELISA. For achieve this, the same technique described in Example 4 was used. The plate was activated with eleven serial dilutions 1:2 of hMPV M-protein, starting with 50 ng of purified antigen. For the virus, the plate was activated with 1:2 serial dilutions starting from 1×10.sup.5 PFU of virus. The anti-M antibodies 3G8/C11 or 7G4/A12 were used at a concentration of 3.4 μg/ml (170 ng/well) diluted in PBS/10% FBS. Subsequently the detection anti-mouse IgG antibody was added at a dilution of 1:2000 (25 ng/well). The results showed that the anti-M antibody 3G8/C11 is capable to recognize up to 190 picograms (pg) of the hMPV M-protein. The anti-M antibody from hybridoma 7G4/A12, was more sensitive and detected up to 90 pg of the hMPV M-protein (
[0024] As for the sensitivity of the antibodies represented by its ability to detect hMPV at high dilution, it was seen that anti-M antibody from hybridoma 3G8/C11 can detect virus dilutions up to 1 in 60, while the antibody from hybridoma 7G4/A12 is capable of detecting the protein in the virus at a dilution of 1:2560, which is equivalent to approximately 390 viral particles (
[0025] The ability of Millipore commercial antibody to detect the virus was evaluated, 1:2 dilutions were made starting from 1×10.sup.6 PFU. It was found that the antibody is capable of detecting 1×10.sup.6 PFU and two more dilutions, i.e., up to a dilution of 1:4 of total virus (
[0026] Controls that could rule out non-specific reactions of both antibodies were included in all tests, they contained all test components excluding the sample (hMPV M-protein or virus).
EXAMPLE 5
Test for Determination of Efficiency of Monoclonal Antibody to Detect Viral Antigens
[0027] The test was performed for determination of the highest dilution of monoclonal anti-hMPV M antibodies from hybridomas 3G8/C11 and 7G4/A12, which allows detection of viral antigen. To achieve this, the same ELISA technique described in Example 4 was used. The plate was activated with 50 ng of purified antigen and the anti-M antibodies 3G8/C11 or 7G4/A12 were used at 1:2 dilutions, starting from the working concentration (3.4 μg/ml) up to 11 dilution in PBS/10% FBS.
[0028] The negative control included in this test was one well containing no sample (M protein), it was blocked with PBS/10% FBS, primary antibody (anti-M 3G8/C11 or anti-M 7G4/A12) was not added and contains only HRP-conjugated anti-mouse IgG.
EXAMPLE 6
Specificity Test of Monoclonal Anti-hMPV M Antibodies for Purified hMPV Antigens, by Dot-Blot Test
[0029] This test is made to confirm the specificity of the antibodies produced by hybridomas 3G8/C11 and 7G4/A12 for hMPV M-protein, using immunoblot methodology. Antigen detection was performed by dot-blot technique, where a nitrocellulose membrane is used as solid support for immobilizing the antigen in a drop of suspension. To achieve this, 20 μl was deposited on the nitrocellulose membrane, each containing: 1×10.sup.6PFU of RSV, 1×10.sup.6PFU of hMPV, purified hMPV M-protein (1 μg, 500 ng and 50 ng), 20 μg of hMPV-infected LLC-MK2 cell extract and 20 μg of non-infected LLC-MK2 cell extract. 500 ng BSA contained in 20 μl were applied as negative control. Solutions applied onto the membrane were allowed to air dry for 15 minutes. Subsequently, the membrane was blocked with 5% BSA in PBS containing 0.05% Tween-20 for 1 h at 25° C. Membranes were incubated with 3.4 μg/ml of monoclonal anti-M antibody from hybridoma 3G8/C11 or hybridoma 7G4/A12 in blocking solution for 1 h at 25° C. The excess antibody not bound to the antigen was removed by three washes with PBS-0.05% Tween-20 at 25° C. The antibodies bound to the antigen were detected using an HRP-conjugated anti-mouse IgG antibody (Invitrogen, Life Technologies #62-6520). This was incubated for 1 h in blocking solution at 25° C. to subsequently remove the excess of unbound antibody by three washes with PBS-0.05% Tween-20 at 25° C. Binding of the monoclonal antibodies to the antigen was observed by capturing the chemiluminescence produced by the commercial substrate “enhanced chemiluminescence Western blot detection system” (ECL, Amersham, Uppsala, Sweden) catalysis, mediated by HRP enzyme bound to anti-mouse IgG. Chemiluminescence capture was performed with the MyECL photodocumentation system (Thermo Fisher). As seen in
EXAMPLE 7
Detection of hMPV Infection in LLC-MK2 Cells by Immunofluorescence using Monoclonal Anti-M hMPV Antibodies
[0030] This test was performed to broaden the spectrum of techniques that detect hMPV infection using the disclosed invention. A fluorescence microscopy test was carried out, wherein non-infected and hMPV-infected LLC-MK2 cells were incubated with monoclonal anti- hMPV M antibodies derived from hybridomas 3G8/C11 or 7G4/A12. The protocol used was as follows: the cells were fixed with 4% paraformaldehyde diluted in PBS, for 10 minutes at 25° C. Cells were then washed with PBS and permeabilized with 0.2% saponin diluted in PBS/10% FBS by 30 minutes at 25° C. Monoclonal antibodies derived from hybridomas 3G8/C11 or 7G4/A12 were added at a concentration of 3.4 μg/ml, diluted in PBS/10% FBS for 1 hour at 25° C. Two washes were then performed with PBS and the anti-mouse IgG secondary antibody conjugated to the fluorophore Alexa Fluor 488 (Life Technologies) was added at a dilution of 1 in 200 in PBS/10% FBS for 1 hour at 25° C. in the dark. Washes were repeated and the nuclei was stained with TOPRO-3 iodide 642/661 (Invitrogen, # -T3605) at a 1: 5000 dilution for 15 minutes at 25° C. in the dark. Finally, it was washed with PBS and coverslip assembly was made in an epifluorescence microscope for further observation. The obtained results show that the antibodies of the invention are also useful to recognize specifically infected cells by immunofluorescence, without binding nonspecifically to non-infected cells (
EXAMPLE 8
Clinical Diagnosis of Samples of hMPV Infected Patients, using Monoclonal Anti-hMPV M Antibodies from Hybridomas 3G8/C11 and 3G8/C11, by Sandwich or Capture ELISA
[0031] Due to the low availability and concentration of viral proteins in the clinical samples obtained from nasopharyngeal swabs, it was necessary to modify the detection method and use capture or sandwich ELISA, using the anti-M antibody from hybridoma 3G8/C11 as capture antibody and the HRP-conjugated anti-M 7G4/A12 clone as detection antibody. For the test, ELISA plate wells were activated with 3.4 μg/ml (170 ng/well) of anti-M antibody from hybridoma 3G8/C11 diluted in PBS, for 1 hour at 37° C. Two washes with PBS-0.05% Tween 20 were made and the plate was then blocked with 200 μl PBS/10% FBS for 2 hours at 37° C. It was washed again and incubated at 4° C. overnight, each well with 50 μl nasopharyngeal aspirates from hMPV-positive patients according to the method of diagnosis “D.sup.3 Ultra DFA Respiratory Virus Screening and ID Kit DHI (Diagnostics Hibryds) USA”, routinely called as “viral panel”, and which were treated as described below*. As controls were included: 1) control of specificity (50 μl sample of patients diagnosed with RSV by viral panel), 2) positive control (50 ng of recombinant hMPV M-protein) and 3) negative control corresponding to healthy patient samples (negative for virus by viral panel).Washes were made the next day and each well was incubated for 1 hour at room temperature with 50 μl of HRP-conjugated anti-M antibody from hybridoma 7G4/A12. The plate was washed 2 more times and developed with 50 μl TMB solution, it was incubated for 10 to 15 minutes in the dark. The reaction was stopped with 50 μl 2N H.sub.2SO.sub.4. Plates were read in an Epoch ELISA reader, certified for clinical diagnosis. The results for this test are shown in
[0032] * Treatment of clinical samples. The samples used for testing were obtained from nasopharyngeal swabs contained in universal transport medium. Samples were centrifuged at 2000 rpm for 10 minutes at 4° C. Subsequently the supernatant (SN1) was separated from the pellet; the latter was incubated with 100 μl RIPA Buffer (50 mM Tris-HCl pH 8.0, 150 mM NaCl, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS and a cocktail of protease inhibitors) for 15 minutes at 4° C., vortexing every 5 minutes. Then it was centrifuged at 2000 rpm for 10 minutes at 4° C. Finally, the obtained supernatant (SN2) was collected and mixed with SN1.
[0033] Examples described herein demonstrate the specificity, efficiency, sensitivity and versatility of these monoclonal anti-hMPV M antibodies secreted by cell lines of hybridomas 3G8/C11 and 3G8/C11. The examples presented herein are a demonstration of some of the uses of the monoclonal anti-hMPV M antibodies, but in no case are limiting the scope of the present invention.