Compounds and methods for the treatment of drug resistance in cancer cells against paclitaxel
20170342086 · 2017-11-30
Inventors
Cpc classification
A61K31/4741
HUMAN NECESSITIES
A61K31/4741
HUMAN NECESSITIES
C07D491/153
CHEMISTRY; METALLURGY
A61K45/06
HUMAN NECESSITIES
A61K2300/00
HUMAN NECESSITIES
A61K2300/00
HUMAN NECESSITIES
G01N2333/47
PHYSICS
International classification
C07D491/153
CHEMISTRY; METALLURGY
Abstract
The disclosure provides compounds and methods for treating cancer by inhibiting the formation of cancer cells resistant to paclitaxel by preventing the formation of GBP1:PIM1 protein interaction during a chemotherapeutic treatment. These compounds and methods are able to treat cancer individually or in conjunction with paclitaxel.
Claims
1. Azapodophyllotoxin compositions having the general formula: ##STR00002## wherein a compound is selected from the group consisting of APA-107, APA-108, APA-109, APA-207, APA-208, APA-209, APA-307, APA-308, APA-309, APA-401, APA-402, APA-403, APA404, APA-405, APA-406, APA-407, APA-408, APA-409, APA-501, APA-502, APA-503, APA-504, APA-505, APA-506, APA-507, APA508, APA-509, APA-601, APA-602, APA-603, APA-604, APA-605, APA-606, APA-607, APA-608, and APA-609, as shown in
2. The Azapodophyllotoxin composition of claim 1, wherein the selected compound is APA-404.
3. In combination, the composition according to claim 1 and paclitaxel.
4. A method for treating cancer using a GBP1:PIM1 inhibitor comprising: administering to a subject an effective amount of at least one Aza-podophyllotoxin derivative of general formula: ##STR00003## wherein A-ring is selected from the group consisting of 1,3-dioxolane, cyclopentane, 1,4-dioxane, one methoxy, two methoxys, and ethyl; and wherein E-ring is selected from the group consisting of dimethoxyanisole, veratrol, anisole, benzene, syringol, bromobenzene, chlorobenzene, 1,2-dichlorobenzene, 2,3-dimethoxybenzene, 3,4,5-trimethoxybenzene.
5. The method according to claim 4, wherein the at least one Aza-podophyllotoxin derivative is APA404.
6. The method according to claim 4, wherein the at least one Aza-podophyllotoxin derivative is administered to the subject in a dose of 100 nM.
7. The method according to claim 5, wherein APA404 is administered to the subject in a dose of 100 nM.
8. The method according to claim 5, wherein paclitaxel is administered to the subject.
9. The method according to claim 7, wherein an effective amount of paclitaxel is administered to the subject.
10. A method of marking proteins comprising: selecting a protein for marking from the group consisting of βIII tubulin and GBP1; and administering at least one Aza-podophyllotoxin derivative of general formula: ##STR00004## wherein A-ring is selected from the group consisting of 1,3-dioxolane, cyclopentane, 1,4-dioxane, one methoxy, two methoxys, and ethyl; and wherein E-ring is selected from the group consisting of dimethoxyanisole, veratrol, anisole, benzene, syringol, bromobenzene, chlorobenzene, 1,2-dichlorobenzene, 2,3-dimethoxybenzene, 3,4,5-trimethoxybenzene.
11. The method according to claim 10, wherein the at least one Aza-podophyllotoxin derivative is APA404.
12. The method according to claim 10, wherein the at least one Aza-podophyllotoxin derivative is administered to the subject in a dose of 100 nM.
13. The method according to claim 11, wherein APA404 is administered to the subject in a dose of 100 nM.
14. The method according to claim 11, wherein the selected protein is βIII tubulin.
15. The method according to claim 14, wherein administration is performed on a cancer patient to monitor βIII tubulin expression during chemotherapy.
16. The method according to claim 10, wherein the Aza-podophyllotoxin derivative is immobilized on a biochip to test for GBP1 or βIII tubulin.
17. The method of claim 16, wherein surface plasmon resonance is applied to the biochip.
18. A method comprising: administering to a subject an effective amount of at least one Aza-podophyllotoxin derivative of general formula: ##STR00005## wherein A-ring is selected from the group consisting of 1,3-dioxolane, cyclopentane, 1,4-dioxane, one methoxy, two methoxys, and ethyl; and wherein E-ring is selected from the group consisting of dimethoxyanisole, veratrol, anisole, benzene, syringol, bromobenzene, chlorobenzene, 1,2-dichlorobenzene, 2,3-dimethoxybenzene, 3,4,5-trimethoxybenzene; for inhibiting the events selected from the group consisting of protein-protein interaction and protein-protein formation.
19. The method according to claim 18, wherein such protein-protein is GBP1:PIM1.
20. The method according to claim 19, wherein the at least one Aza-podophyllotoxin derivative is APA404.
21. The method according to claim 20 wherein APA404 is administered in a dose of 100 nM.
22. The method according to claim 21, wherein such inhibition prevents resistance to paclitaxel.
23. A method comprising: administering to a subject an effective amount of at least one Aza-podophyllotoxin derivative of general formula: ##STR00006## wherein A-ring is selected from the group consisting of 1,3-dioxolane, cyclopentane, 1,4-dioxane, one methoxy, two methoxys, and ethyl; and wherein E-ring is selected from the group consisting of dimethoxyanisole, veratrol, anisole, benzene, syringol, bromobenzene, chlorobenzene, 1,2-dichlorobenzene, 2,3-dimethoxybenzene, 3,4,5-trimethoxybenzene; for inhibiting the events selected from the group consisting of protein-protein interaction and protein-protein formation.
24. The method according to claim 23, wherein such protein-protein is GBP1:PIM1.
25. The method according to claim 24, wherein the at least one Aza-podophyllotoxin derivative is APA404.
26. The method according to claim 25 wherein APA404 is administered in a dose of 100 nM.
27. The method according to claim 26, wherein such inhibition prevents resistance to paclitaxel.
28. A synthesis procedure for a Azapodophyllotoxin composition having the general formula: ##STR00007## wherein a compound is selected from the group consisting of APA-107, APA-108, APA-109, APA-207, APA-208, APA-209, APA-307, APA-308, APA-309, APA-401, APA-402, APA-403, APA404, APA-405, APA-406, APA-407, APA-408, APA-409, APA-501, APA-502, APA-503, APA-504, APA-505, APA-506, APA-507, APA508, APA-509, APA-601, APA-602, APA-603, APA-604, APA-605, APA-606, APA-607, APA-608, and APA-609, as shown in
29. A synthesis procedure for a Azapodophyllotoxin composition having the general formula: ##STR00008## wherein a compound is selected from the group consisting of APA-107, APA-108, APA-109, APA-207, APA-208, APA-209, APA-307, APA-308, APA-309, APA-401, APA-402, APA-403, APA404, APA-405, APA-406, APA-407, APA-408, APA-409, APA-501, APA-502, APA-503, APA-504, APA-505, APA-506, APA-507, APA508, APA-509, APA-601, APA-602, APA-603, APA-604, APA-605, APA-606, APA-607, APA-608, and APA-609, as shown in
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0024] The accompanying drawings, which are incorporated herein, constitute part of the specification and illustrate the preferred embodiment of the invention.
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DETAILED DESCRIPTION OF THE INVENTION
[0039] The disclosure provides compounds and methods for treating cancer by inhibiting the formation of cancer cells resistant to paclitaxel by preventing the formation of GBP1:PIM1 complex on β-III tubulin protein during a chemotherapeutic treatment which expresses on tubulin protein during the treatment of cancer using tubulin inhibitor drugs. β-III tubulin overexpression is one of the important mechanisms of paclitaxel resistance with strong support in clinical studies. Additional synthesized compounds are described in patent application Ser. No. 14/929,641, filed on Nov. 2, 2015, incorporated herein by reference. In particular, these compounds and methods are able to treat cancer using a pharmaceutical composition comprising inhibition of GBP1:PIM1 complex formation, wherein paclitaxel can be effectively used at optimal amounts, and avoids the development of drug resistance i.e., amounts lower than the currently clinically recommended, thereby reducing the side effects of such treatment. The present compounds and methods overcome or reduce the risk of developing cancer cells resistant to tubulin inhibitor drug i.e. paclitaxel, which is one of the significant drawbacks of the chemotherapeutic therapy.
[0040] The present disclosure provides novel compound 4-(2-Hydroxyethyl)-6-methoxy-9-phenyl-4,9-dihydrofuro [3,4-b]-quinolin-1(3H)-one, also known as compound NSC756093 or APA-404, which is an Azapodophyllotoxin derivative, capable of inhibiting the formation of the GBP1:PIM1 complex by inhibiting binding site of GPB1, which over-expressed on tubulin protein to repair it against the treatment by paclitaxel and leads to develop drug resistance in cancer.
Synthesis of Compound NSC756093
[0041] As shown in
[0042] In another version of the synthesis, the mixture of tetronic acid (326.27 mg, 3.13 mmol), substituted aniline 2-(3-methoxyphenylamino)ethanol (534.05 mg, 3.13 mmol) and benzaldehyde (319.4 μl, 3.13 mmol) dissolved in 50:50 (Glycol:water) and irradiated under microwaves (300 watt, 100° C.); the reaction consumed approximately 6 watts during minutes. After cooling, the precipitate was filtered off, washed with minimal cold ethanol and then recrystallized from ethanol, and characterized by UV, NMR and mass spectroscopy. By changing solvent it becomes a total green synthetic method.
[0043] A different process was also used. In this process, after cooling, the precipitate is filtered off, slurry with dry silica gel 60, 230-400 mesh was prepared for column chromatography using silica gel 60, 230-400 mesh solid support. A mixture of Hexane: Ethyl Acetate: Acetonitrile (40:40:20) was used as eluent for purification of AP404 by silica column chromatography, and characterized by UV, NMR and mass spectroscopy.
[0044] Substituted aniline was synthesized as reported in our publication Synthesis of novel functionalized 4-aza-2,3-didehydropodophyllotoxin derivatives with potential antitumor activity, J. Het Chem. J. Heterocyclic Chem., Vol. 47, Issue 6, November (2010), pp. 1275-1282 (incorporated by reference herein).
[0045] Compound NSC756093, Yield: (564 mg, 51.29%), 1H NMR (DMSO-d6, 400 MHz): δ 3.67-3.71 (m, 3H), 3.73 (s, 3H), 3.81-3.92 (m, 1H), 4.93-5.16 (m, 4H), 6.56-6.59 (m, 1H), 6.70-6.71 (d, J=4 Hz, 1H), 6.96-7.01 (m, 1H), 7.12-7.18 (m, 1H), 7.20-7.28 (m, 4H). C NMR (DMSO-d6, 100 MHz): δ38.95, 47.85, 55.24, 57.77, 65.81, 96.27, 100.38, 108.62, 126.13, 127.54, 128.22, 132.05, 137.40, 158.68, 160.56, 172.0. LC-MS (ESI-TOF): ([C20H19 NO4+H]+ calcd m/z 338.1387) found 338.1382.
GBP1 Inhibition
[0046] β-III tubulin is not suitable for in vitro screening due to the requirement of specific post-transcriptional confirmation in its structure. βIII-tubulin overexpresses GBP1 which enhances the binding a panel of pro-survival kinases like PIM1 this combination re-establishes the function of tubulin thus resistance develops.
[0047] At variance of βIII-tubulin, GBP1 and PIM1 can be expressed in vitro and can be used to test compounds capable of inhibiting protein:protein (GBP1:PIM1) interaction. The kinetics of the GBP1:PIM1 interaction was monitored with surface plasmon resonance technology (SPR). PIM1 was immobilized on the biochip as ligand and in a parallel flow path, carbonic anhydrase (CA) was immobilized on the chip as negative control. The binding of GBP1 was tested on both targets, flowing the protein on the chip surface at different concentrations. CA was also used as analyte control in the same range of [GBP1], thereby demonstrating that GBP1:PIM1 interaction is not dependent on any specific binding of PIM1.
[0048] All the analyses were performed in two independent channels of the biochip. Out of total Forty-four (44) Azapodophyllotoxin derivatives were tested, 32 compounds were completely inactive as inhibitor of the GBP1:PIM1 interaction. Eleven (11) compounds were capable of producing an inhibition of the binding around 10-20%. Compound NSC756093 was found capable of inhibiting 65% of the GBP1:PIM1 interaction.
[0049] To confirm the activity of the drug in cell lines, the ability of NSC756093 was tested to inhibit the GBP1:PIM1 interaction in SKOV3 cells. The cells were treated for 3 h using 100 nM of the drug, then the cells were scraped and the pellet was used for coimmunoprecipitation of PIM1 with GBP1. The results demonstrated that treatment with NSC756093 inhibits the interaction of the GBP1:PIM1 interaction also in vitro as shown in
General synthesis of 4-aza-2,3-didehydropodophyllotoxin derivatives
[0050] As shown in
[0051] In another version of the synthesis, the mixture of tetronic acid (326.27 mg, 3.13 mmol), substituted aniline 2-(3-methoxyphenylamino)ethanol (534.05 mg, 3.13 mmol) and benzaldehyde (319.4 μl, 3.13 mmol) dissolved in 50:50 (Glycol:water) and irradiated under microwaves (300 watt, 100° C.); the reaction consumed approximately 6 watts during 45 minutes. After cooling, the precipitate was filtered off, washed with minimal cold ethanol and then recrystallized from ethanol, and characterized by UV, NMR and mass spectroscopy. By changing solvent it becomes a total green synthetic method.
[0052] A different process was also used. In this process, after cooling, the precipitate is filtered off, slurry with dry silica gel 60, 230-400 mesh was prepared for column chromatography using silica gel 60, 230-400 mesh solid support. A mixture of Hexane: Ethyl Acetate: Acetonitrile (40:40:20) was used as eluent for purification of AP404 by silica column chromatography, and characterized by UV, NMR and mass spectroscopy.
[0053] Synthesis of substituted aniline is synthesized as reported in our publication S. Het Chem. J. Heterocyclic Chem., supra.
Experimental Section
[0054] Chemistry. Melting points were determined on a MEL-TEMP instrument and are uncorrected. IR spectra were recorded on a PerkinElmer Spectrum 100 FTIR spectrometer on ATS mode. 1H, COSY, 13C, DEPT45, DEPT90, DEPT135, and HETCOR NMR spectra were measured on a Bruker 400 Ultra Shield spectrometer using DMSO-d6 as solvent. All chemical shifts are reported in parts per million relative to tetramethylsilane. Coupling constants (J) are reported in Hz. The LC-MS data was taken on an Agilent 1200 series system with Agilent 6210 time-of-flight mass detector. Absorption spectra were obtained in DMSO, using DMSO as blank, with an Agilent 8453 absorption spectrometer. The purities of all of the tested compounds were >95% as estimated by HPLC. General Synthesis of 4-Aza-2,3-didehydropodophyllotoxin Derivatives. These derivatives were synthesized by following previously reported method. An equimolar mixture of tetronic acid, substituted aniline, and aromatic aldehyde was dissolved in 50:50 (Glycol:water). The reaction mixture was refluxed for 30-90 min. After cooling, the precipitate was filtered off, washed with minimal cold ethanol, and then recrystallized from ethanol to afford the desired compound. Characterization data (NMR, HRMS etc.) of compounds NSC750210-750213, 750716-750723, and 751499-751504 have been published earlier.13,14 We found that the synthesis of products where R1 is methoxy at the meta position produced regioisomeric products with some aromatic aldehydes as observed from NMR data, while all remaining aryl amino alcohols produced only one regioisomeric expected product.
[0055] 5-(2-Hydroxyethyl)-9-(3-chlorophenyl)-6,9-dihydro-[1,3]dioxolo-[4,5-g]furo[3,4-b]quinolin-8(5H)-one (NSC756083). Yield: 78%. 1H NMR (DMSO-d6, 400 MHz): δ 3.56-3.86 (m, 4H), 4.96 (t, 1H), 5.03-5.05 (d, J=8 Hz, 2H), 5.11 (s, 1H), 5.86-5.92 (m, 2H), 6.69 (s, 1H), 6.94 (s, 1H), 7.45-7.53 (m, 1H), 7.58-7.63 (m, 1H), 7.95-7.80 (m, 1H), 8.03-8.05 (m, 1H). 13C NMR (DMSO-d6, 100 MHz): δ39.36, 48.22, 57.89, 65.95, 94.07, 96.51, 101.50, 110.12, 117.83, 121.48, 121.90, 129.93, 131.25, 134.52, 143.47, 147.27, 147.79, 148.84, 160.81, 172.07. LC-MS (ESI-TOF): m/z 386.0770 ([C20H16 Cl NO5+H]+ calcd 386.0790).
[0056] 4-(2-Hydroxyethyl)-10-(3-bromophenyl)-3,4,6,7,8,10-hexahydro-1H-cyclopenta[g]furo[3,4-b]quinolin-1-one (NSC756084). Yield: 70%. 1H NMR (DMSO-d6, 400 MHz): δ 1.90-2.00 (m, 2H), 2.61-2.77 (m, 2H), 2.80-2.84 (t, 2H), 3.65-3.78 (m, 3H), 3.80-3.92 (m, 1H), 4.98-5.06 (m, 2H), 5.10-5.17 (m, 2H), 6.92 (s, 1H), 7.11 (s, 1H), 7.17-7.25 (m, 2H), 7.30-7.38 (m, 1H), 7.42 (s, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 25.13, 31.46, 32.33, 39.41, 48.23, 57.70, 65.84, 94.81, 110.17, 121.71, 123.84, 126.58, 126.87, 129.13, 130.19, 130.51, 134.81, 139.03, 143.73, 149.91, 160.82. LC-MS (ESI-TOF): m/z 426.0665 ([C22H20 Br NO3+H]+ calcd 426.0699).
[0057] 4-(2-Hydroxyethyl)-10-(3-chlorophenyl)-3,4,6,7,8,10-hexahydro-1H-cyclopenta[g]furo[3,4-b]quinolin-1-one (NSC756085). Yield: 79%. 1H NMR (DMSO-d6, 400 MHz): δ 1.90-2.00 (m, 2H), 2.61-2.77 (m, 2H), 2.80-2.84 (t, 2H), 3.65-3.80 (m, 3H), 3.82-3.92 (m, 1H), 4.98-5.08 (m, 2H), 5.09-5.19 (m, 2H), 6.93 (s, 1H), 7.11 (s, 1H), 7.17-7.23 (m, 2H), 7.25-7.31 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 25.13, 31.46, 32.33, 39.43, 47.89, 57.70, 65.85, 94.80, 110.16, 123.84, 126.23, 126.44, 126.57, 127.37, 130.16, 132.96, 134.81, 139.02, 143.72, 149.65, 160.82. LC-MS (ESI-TOF): m/z 382.1206 ([C22H20 Cl NO3+H]+ calcd 382.1204).
[0058] 4-(2-Hydroxyethyl)-10-(3,4-dichlorophenyl)-,4,6,7,8,10-hexahydro-1H-cyclopenta[g]furo[3,4-b]quinolin-1-one (NSC756086). Yield: 58%. 1H NMR (DMSO-d6, 400 MHz): δ 1.90-2.01 (m, 2H), 2.65-2.75 (m, 2H), 2.80-2.84 (t, 2H), 3.65-3.78 (m, 3H), 3.85-3.90 (m, 1H), 5.00-5.06 (m, 2H), 5.10-5.16 (m, 2H), 6.92 (s, 1H), 7.12 (s, 1H), 7.19-7.22 (m, 1H), 7.49-7.51 (m, 2H). 13C NMR (DMSO-d6,100 MHz): δ 25.13, 31.44, 32.33, 39.43, 47.91, 57.67, 65.92, 94.46, 110.27, 123.46, 126.57, 128.10, 128.91, 129.49, 130.51, 130.87, 134.77, 139.14, 143.89, 148.16, 160.95, 172.09. LC-MS (ESI-TOF): m/z 416.0803 ([C22H19 C12 NO3+H]+ calcd 416.0815).
[0059] 6-(2-Hydroxyethyl)-10-(bromophenyl)-2,3,7,10-tetrahydro-[1,4]-dioxino[2,3-g]furo[3,4-b]quinolin-9(6H)-one (NSC756087). Yield: 70%. 1H NMR (DMSO-d6, 400 MHz): δ 3.62-3.75 (m, 3H), 3.76-3.85 (m, 1H), 4.13-4.18 (m, 2H), 4.18-4.26 (m, 2H), 4.94 (s, 1H), 5.02-5.18 (m, 3H), 6.57 (s, 1H), 6.76 (s, 1H), 7.18-7.25 (m, 2H), 7.31-7.38 (m, 1H), 7.43 (s, 1H). 13C NMR (DMSO-d6, 100 MHz): δ39.11, 48.03, 57.70, 63.95, 64.24, 65.84, 94.15, 103.11, 118.80, 118.87, 121.72, 126.76, 129.17, 130.13, 130.32, 130.51, 139.48, 142.62, 149.60, 160.65, 172.15. LC-MS (ESI-TOF): m/z 444.0404 ([C21H18 Br NO5+H]+ calcd. 444.0441).
[0060] 6-(2-Hydroxyethyl)-10-(3-chlorophenyl)-2,3,7,10-tetrahydro-[1,4]dioxino[2,3-g]furo[3,4-b]quinolin-9(6H)-one (NSC756088). Yield: 61%. 1H NMR (DMSO-d6, 400 MHz): δ 3.62-3.75 (m, 3H), 3.76-3.85 (m, 1H), 4.13-4.18 (m, 2H), 4.18-4.26 (m, 2H), 4.95 (s, 1H), 5.00-5.17 (m, 3H), 6.57 (s, 1H), 6.76 (s, 1H), 7.16-7.24 (m, 2H), 7.25-7.32 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 39.14, 48.02, 57.70, 63.95, 64.24, 65.84, 94.14, 103.10, 118.79, 118.86, 126.26, 126.34, 127.29, 130.17, 130.33, 132.97, 139.48, 142.61, 149.34, 160.64, 172.14. LC-MS (ESI-TOF): m/z 400.0931 ([C21H18 Cl NO5+H]+ calcd 400.0946).
[0061] 6-(2-Hydroxyethyl)-10-(3,4-dichlorophenyl)-2,3,7,10-tetrahydro-[1,4]dioxino[2,3-g]furo[3,4-b]quinolin-9(6H)-one (NSC756089). Yield: 70%. 1H NMR (DMSO-d6, 400 MHz): δ 3.62-3.83 (m, 4H), 4.08-4.30 (m, 4H), 4.93-5.20 (m, 4H), 6.58 (s, 1H), 6.78 (s, 1H), 7.19-7.21 (d, J=8 Hz, 1H), 7.50 (s, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 38.15, 48.05, 57.69, 63.95, 64.25, 65.91, 93.84, 103.21, 118.44, 118.78, 127.98, 128.96, 129.41, 130.31, 130.50, 130.90, 139.57, 142.73, 147.83, 160.75, 172.12. LC-MS (ESI-TOF): m/z 456.0373 ([C21H17 Cl2 NO5+Na]+ calcd 456.0376).
[0062] 4-(2-Hydroxyethyl)-6-methoxy-9-(3,4,5-trimethoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756090). Yield: 54%. 1HNMR (DMSO-d6, 400 MHz): δ 3.58 (s, 3H), 3.65-3.72 (m, 10H), 3.74 (s, 3H), 4.85 (s, 1H), 4.98-4.52 (m, 1H), 5.06-5.19 (q, 2H), 6.51 (s, 2H), 6.59-6.62 (m, 1H), 6.71-6.72 (d, J=4 Hz, 1H), 7.11-7.13 (d, J=8 Hz, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 38.86, 47.70, 55.23, 55.73, 57.85, 59.79, 65.83, 96.13, 100.35, 104.53, 108.64, 118.97, 131.82, 135.85, 137.07, 143.09, 152.72, 158.68, 160.83, 172.19. LC-MS (ESI-TOF): m/z 428.1699 ([C23H25 NO7+H]+ calcd 428.1704).
[0063] 9-(3,4-Dimethoxyphenyl)-4-(2-hydroxyethyl)-6-methoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756091). Yield: 48%. 1H NMR (DMSO-d6, 400 MHz): δ 3.67-3.72 (m, 9H), 3.73 (s, 3H), 3.83-3.92 (m, 1H), 4.57-5.16 (m, 4H), 6.57-6.60 (m, 1H), 6.64-6.67 (m, 1H), 6.69-6.70 (d, J=J=4 Hz, 1H), 6.78-6.80 (d, J=8 Hz, 1H), 6.83-6.84 (d, J=4 Hz, 1H), 7.02-7.05 (m, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 38.45, 47.76, 55.23, 55.38, 55.49, 57.81, 65.75, 96.41, 100.25, 108.57, 111.43, 111.81, 119.17, 119.28, 131.94, 137.20, 140.18, 147.21, 148.54, 158.60, 160.45, 172.18. LC-MS (ESITOF): m/z 398.1592 ([C22H23 NO6+H]+ calcd 398.1598).
[0064] 4-(2-Hydroxyethyl)-6-methoxy-9-(3-methoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756092). Yield: 52% [regio-isomeric mixture]. 1H NMR (400 MHz, acetonitrile-d3) δ3.74-3.67 (m, 1H), 3.75 (s, 3H), 3.79 (s, 3H), 3.91-3.79 (m, 4H), 4.95 (s, 1H), 5.10-4.97 (m, 2H), 6.59 (dd, J=8.5, 2.5 Hz, 1H), 6.65 (d, J=2.5 Hz, 1H), 6.75 (ddd, J=8.2, 2.6, 0.9 Hz, 1H), 6.81 (dd, J=2.6, 1.7 Hz, 1H), 6.85 (dt, J=7.6, 1.2 Hz, 1H), 7.04 (dd, J=8.4, 0.8 Hz, 1H), 7.21 (t, J=7.9 Hz, 1H). 13C NMR (101 MHz, CD3CN) δ40.44, 48.86, 55.71, 56.03, 59.37, 67.08, 101.29, 109.46, 112.32, 114.58, 120.03, 120.91, 130.38, 133.01, 138.59, 150.00, 160.17, 160.77, 161.48, 173.56. LC-MS (ESI-TOF): m/z 368.1491 ([C21H21 NO5+H]+ calcd 368.1492).
[0065] 4-(2-Hydroxyethyl)-6-methoxy-9-phenyl-4,9-dihydrofuro[3,4-b]-quinolin-1(3H)-one (NSC756093). Yield: 50%. 1H NMR (DMSO-d6, 400 MHz): δ 3.67-3.71 (m, 3H), 3.73 (s, 3H), 3.81-3.92 (m, 1H), 4.93-5.16 (m, 4H), 6.56-6.59 (m, 1H), 6.70-6.71 (d, J=4 Hz, 1H), 6.96-7.01 (m, 1H), 7.12-7.18 (m, 1H), 7.20-7.28 (m, 4H). 13C NMR (DMSO-d6, 100 MHz): δ 38.95, 47.85, 55.24, 57.77, 65.81, 96.27, 100.38, 108.62, 126.13, 127.54, 128.22, 132.05, 137.40, 158.68, 160.56, 172.0. LC-MS (ESI-TOF): m/z 338.1382 ([C20H19 NO4+H]+ calcd 338.1387).
[0066] 4-(2-Hydroxyethyl)-6-methoxy-9-(4-methoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756094). Yield: 52% [regio-isomeric mixture]. 1H NMR (400 MHz, acetonitrile-d3) δ7.25-7.09 (m, 2H), 7.00 (dd, J=8.5, 0.8 Hz, 1H), 6.90-6.77 (m, 2H), 6.64 (d, J=2.4 Hz, 1H), 6.59 (dd, J=8.5, 2.5 Hz, 1H), 5.11-4.95 (m, 2H), 4.93 (s, 1H), 3.88-3.80 (m, 3H), 3.78 (s, 3H), 3.76 (s, 3H), 3.75-3.62 (m, 2H). 13C NMR (101 MHz, CD3CN): δ 172.71, 160.28, 159.17, 158.31, 139.88, 137.72, 132.18, 128.72, 119.63, 113.66, 108.59, 100.28, 97.40, 66.09, 58.50, 55.11, 54.83, 47.93, 38.69. LC-MS (ESI-TOF): m/z 368.1485 ([C21H21 NO5+H]+ calcd 368.1492).
[0067] 9-(3-Bromophenyl)-4-(2-hydroxyethyl)-6-methoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756095). Yield: 51%. 1H NMR (CD3CN, 400 MHz): δ 3.79 (s, 3H), 3.80-3.82 (m, 4H), 4.82-5.03 (m, 4H), 6.59-6.62 (m, 1H), 6.55-6.66 (d, J=4 Hz, 1H), 6.98-7.00 (d, J=8 Hz, 1H), 7.22-7.27 (m, 2H), 7.34-7.38 (m, 1H), 7.42-7.43 (m, 1H). 13C NMR (CD3CN, 100 MHz): δ 38.95, 47.68, 54.83, 58.10, 65.93, 100.24, 108.46, 118.07, 121.74, 126.54, 129.14, 129.94, 130.02, 131.93, 137.50, 149.51, 159.13, 160.39, 172.23. LC-MS (ESITOF): m/z 438.0291 ([C20H18 Br NO4+Na]+ calcd 438.0311).
[0068] 4-(2-Hydroxyethyl)-6,7-dimethoxy-9-(3,4,5-trimethoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756097). Yield: 45%. 1H NMR (DMSO-d6, 400 MHz): δ 3.59 (s, 3H), 3.62 (s, 4H), 3.70 (s, 8H), 3.78 (s, 3H), 4.85 (s, 1H), 4.96-4.98 (t, 1H), 5.04-5.19 (m, 2H), 6.55 (s, 2H), 6.76 (s, 1H), 6.82 (s, 1H). 13C NMR (DMSO-d6,100 MHz): δ 39.54, 47.78, 55.75, 55.91, 55.96, 58.14, 59.80, 65.73, 94.70, 99.49, 104.49, 114.33, 118.15, 129.77, 135.84, 142.79, 145.12, 148.08, 152.72, 160.69, 172.39. LC-MS (ESI-TOF): m/z 458.1805 ([C24H27 NO8+H]+ calcd 458.1809). 9-(3,4-Dimethoxyphenyl)-4-(2-hydroxyethyl)-6,7-dimethoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756098). Yield: 64%. 1H NMR (DMSO-d6, 400 MHz): δ 3.61 (s, 3H), 3.68-3.69 (2s, 9H), 3.78 (s, 3H), 3.88-3.40 (m, 1H), 4.85 (s, 1H), 4.99-5.14 (m, 3H), 6.66-6.69 (m, 1H), 6.72 (s, 1H), 6.74 (s, 1H), 6.78-6.80 (d, J=8 Hz, 1H), 6.87-6.88 (d, J=4 Hz, 1H). 13C NMR (DMSO-d6, 100 MHz): δ38.90, 47.87, 55.40, 55.43, 55.86, 55.95, 58.11, 65.66, 95.03, 99.44, 111.38, 111.68, 114.42, 118.34, 119.20, 129.33, 139.88, 145.08, 147.20, 148.00, 148.53, 160.29, 172.36. LC-MS (ESI-TOF): m/z 428.1704 ([C23H25 NO7+H]+ calcd 428.1704).
[0069] 4-(2-Hydroxyethyl)-6,7-dimethoxy-9-(3-methoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756099). Yield: 68%. 1H NMR (DMSO-d6, 400 MHz): δ 3.60 (s, 3H), 3.69-3.73 (m, 5H), 3.79 (s, 3H), 3.87-3.98 (m, 1H), 4.90 (s, 1H), 5.00-5.15 (m, 3H), 6.68-6.73 (m, 2H), 6.76 (s, 1H), 6.78-6.81 (m, 2H), 7.13-7.17 (m, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 39.38, 47.91, 54.84, 55.89, 55.95, 58.10, 59.72, 65.70, 94.84, 99.54, 111.19, 113.53, 114.48, 117.85, 119.77, 129.22, 130.11, 145.11, 148.12, 148.54, 159.20, 160.40, 172.28. LC-MS (ESI-TOF): m/z 398.1596 ([C22H23 NO6+H]+ calcd 398.1598).
[0070] 4-(2-Hydroxyethyl)-6,7-dimethoxy-9-phenyl-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756100). Yield: 60%. 1H NMR (DMSOd6, 400 MHz): δ 3.51 (s, 3H), 3.60-3.73 (m, 6H), 3.78-3.90 (m, 1H), 4.85 (s, 1H), 4.95-5.06 (m, 3H), 6.57 (s, 1H), 6.68 (s, 1H), 7.03-7.10 (m, 1H), 7.13-7.20 (m, 4H). 13C NMR (DMSO-d6, 100 MHz): δ 39.38, 47.91, 55.87, 55.95, 58.08, 65.71, 94.94, 99.55, 114.53, 117.96, 126.16, 127.50, 128.20, 130.17, 145.12, 146.98, 148.09, 160.36, 172.28. LC-MS (ESI-TOF): m/z 368.1490 ([C21H21 NO5+H]+ calcd 368.1492).
[0071] 4-(2-Hydroxyethyl)-6,7-dimethoxy-9-(4-methoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756102). Yield: 74%. 1H NMR (DMSO-d6, 400 MHz): δ 3.59 (s, 3H), 3.67-3.83 (m, 9H), 3.84-3.95 (m, 1H), 4.87 (s, 1H), 5.02-5.15 (m, 3H), 6.63 (s, 1H), 6.74 (s, 1H), 6.77-6.83 (m, 2H), 7.11-7.15 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 38.60, 47.89, 54.91, 55.88, 55.96, 58.08, 65.64, 95.19, 99.50, 113.55, 114.56, 118.35, 128.45, 130.12, 139.41, 145.11, 148.03, 157.61, 160.10, 172.30. LC-MS (ESI-TOF): m/z 398.1597 ([C22H23 NO6+H]+ calcd 398.1598).
[0072] 9-(3-Bromophenyl)-4-(2-hydroxyethyl)-6,7-dimethoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756103). Yield: 70%. 1H NMR (DMSO-d6, 400 MHz): δ 3.60 (s, 3H), 3.68-3.78 (m, 2H), 3.79 (s, 4H), 3.85-3.95 (m, 1H), 4.98 (s, 1H), 5.02-5.16 (m, 3H), 6.67 (s, 1H), 6.77 (s, 1H), 7.18-7.25 (m, 2H), 7.32-7.38 (m, 1H), 7.41-7.45 (m, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 39.26, 47.97, 55.93, 58.02, 65.82, 94.38, 99.64, 114.48, 117.12, 121.68, 126.76, 129.14, 130.14, 130.19, 130.45, 145.22, 148.29, 149.48, 160.61, 172.20. LC-MS (ESI-TOF): m/z 446.0528 ([C21H20 Br NO5+H]+ calcd 446.0598).
[0073] 9-(3-Chlorophenyl)-4-(2-hydroxyethyl)-6,7-dimethoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756104). Yield: 72%. 1H NMR (DMSO-d6, 400 MHz): δ 3.60 (s, 3H), 3.68-3.77 (m, 2H), 3.79 (s, 4H), 3.87-3.95 (m, 1H), 4.99 (s, 1H), 5.02-5.16 (m, 3H), 6.67 (s, 1H), 6.77 (s, 1H), 7.18-7.25 (m, 2H), 7.26-7.30 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 39.26, 47.97, 55.92, 58.03, 65.83, 94.37, 99.64, 114.45, 117.13, 126.25, 126.35, 127.30, 130.11, 130.18, 132.93, 145.22, 148.28, 149.24, 160.62, 172.21. LC-MS (ESI-TOF): m/z 402.1080 ([C21H20 Cl NO5+H]+ calcd 402.1103).
[0074] 9-(3,4-Dichlorophenyl)-4-(2-hydroxyethyl)-6,7-dimethoxy-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756105). Yield: 71%. 1H NMR (DMSO-d6, 400 MHz): δ 3.60 (s, 3H), 3.68-3.77 (m, 2H), 3.79 (s, 4H), 3.87-3.95 (m, 1H), 4.99 (s, 1H), 5.02-5.06 (m, 2H), 5.08-5.15 (m, 2H), 6.67 (s, 1H), 6.77 (s, 1H), 7.19-7.22 (m, 1H), 7.48-7.53 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 38.55, 47.98, 55.92, 58.00, 65.90, 94.06, 99.69, 114.37, 116.70, 128.00, 128.88, 129.42, 130.14, 130.46, 130.83, 145.29, 147.74, 148.37, 160.73, 172.18. LC-MS (ESI-TOF): m/z 436.0646 ([C21H19 Cl2 NO5+H]+ calcd 436.0713).
[0075] 6-Ethyl-4-(2-hydroxyethyl)-9-(3,4,5-trimethoxyphenyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756106). Yield: 54%. 1HNMR (DMSO-d6, 400 MHz): δ 1.14-1.18 (t, 3H), 2.53-2.59 (q, 2H), 3.59-3.72 (m, 12H), 3.95-4.02 (m, 1H), 4.88 (s, 1H), 4.99 (bs, 1H), 5.06-5.21 (q, 2H), 6.53 (s, 2H), 6.83-6.85 (d, J=8 Hz, 1H), 7.04 (s, 1H), 7.12-7.14 (d, J=8 Hz, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 15.60, 28.00, 38.86, 47.55, 55.73, 57.83, 59.79, 65.82, 95.52, 104.56, 113.40, 122.96, 124.02, 130.90, 135.88, 142.96, 143.29, 152.74, 160.98, 172.25. LC-MS (ESI-TOF): m/z 426.1915 ([C24H27 NO6+H]+ calcd 426.1911).
[0076] 6-Ethyl-4-(2-hydroxyethyl)-9-phenyl-4,9-dihydrofuro[3,4-b]-quinolin-1(3H)-one (NSC756108). Yield: 56%. 1H NMR (DMSO-d6, 400 MHz): δ 1.06-1.10 (t, 3H), 2.45-2.51 (q, 2H), 3.58-3.70 (m, 3H), 3.75-3.3 (m, 1H), 4.88 (s, 1H), 4.96-4.50 (m, 1H), 5.02-5.09 (m, 2H), 6.73-6.75 (m, 1H), 6.90-6.92 (d, J=8 Hz, 1H), 6.95 (s, 1H), 7.04-7.08 (m, 1H), 7.12-7.17 (m, 4H). 13C NMR (DMSO-d6,100 MHz): δ 15.58, 27.98, 38.94, 47.69, 57.74, 65.81, 95.67, 113.42, 122.92, 123.90, 126.17, 127.58, 128.25, 131.14, 136.21, 143.32, 147.14, 160.70, 172.16. LC-MS (ESI-TOF): m/z 336.1599 ([C21H21 NO3+H]+ calcd 336.1594).
[0077] 9-(3-Bromophenyl)-6-ethyl-4-(2-hydroxyethyl)-4,9-dihydrofuro-[3,4-b]quinolin-1(3H)-one (NSC756110). Yield: 55%. 1H NMR (DMSO-d6, 400 MHz): δ 1.14-1.18 (t, 3H), 2.54-2.59 (q, 2H), 3.65-3.82 (m, 3H), 3.84-3.92 (m, 1H), 5.01-5.19 (m, 4H), 6.83-6.85 (m, 1H), 6.98-7.00 (d, J=8 Hz, 1H), 7.05 (s, 1H), 7.21-7.25 (m, 2H), 7.33-7.36 (m, 1H), 7.43 (s, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 15.53, 27.98, 38.90, 47.76, 57.70, 65.93, 95.08, 113.63, 121.71, 123.09, 123.15, 126.89, 129.17, 130.22, 130.51, 131.17, 136.19, 143.64, 149.62, 160.98, 172.09. LC-MS (ESI-TOF): m/z 414.0626 ([C21H20 Br NO3+H]+ calcd 414.0699).
[0078] 9-(3-Chlorophenyl)-6-ethyl-4-(2-hydroxyethyl)-4,9-dihydrofuro-[3,4-b]quinolin-1(3H)-one (NSC756111). Yield: 53%. 1H NMR (DMSO-d6, 400 MHz): δ 1.14-1.18 (t, 3H), 2.54-2.58 (q, 2H), 3.68-3.80 (m, 3H), 3.80-3.91 (m, 1H), 5.03-5.19 (m, 4H), 6.83-6.85 (d, J=8 Hz, 1H), 6.99-7.01 (d, J=8 Hz, 1H), 7.05 (s, 1H), 7.18-7.23 (m, 2H), 7.25-7.30 (m, 2H). 13C NMR (DMSO-d6, 100 MHz): δ 16.02, 28.49, 39.44, 48.26, 58.20, 66.43, 95.58, 114.12, 123.57, 123.65, 126.76, 126.97, 127.90, 130.66, 131.65, 133.48, 136.69, 144.14, 149.86, 161.48, 172.60. LC-MS (ESI-TOF): m/z 370.1170 ([C21H20 Cl NO3+H]+ calcd 370.1204).
[0079] 9-(3,4-Dichlorophenyl)-6-ethyl-4-(2-hydroxyethyl)-4,9-dihydrofuro[3,4-b]quinolin-1(3H)-one (NSC756112). Yield: 70%. 1H NMR (DMSO-d6, 400 MHz): δ 1.14-1.18 (t, 3H), 2.54-2.59 (q, 2H), 3.69-3.81 (m, 3H), 3.83-3.91 (m, 1H), 5.03-5.19 (m, 4H), 6.83-6.85 (m, 1H), 6.99-7.01 (d, J=8 Hz, 1H), 7.05 (s, 1H), 7.18-7.22 (m, 2H), 7.28-7.30 (m, 1H). 13C NMR (DMSO-d6, 100 MHz): δ 15.53, 27.99, 38.94, 47.76, 57.70, 65.93, 95.08, 113.63, 123.07, 123.15, 126.26, 126.47, 127.40, 130.16, 131.15, 132.98, 136.19, 143.63, 149.36, 160.98, 172.10. LC-MS (ESI-TOF): m/z 404.0711 ([C21H19Cl2 NO3+H]+ calcd 404.0815).
[0080] As discussed in our recent manuscript in J. Med. Chem., 2014, 57 (19), pp 7916-793, supra, and based on Structure Activity Relationships (SAR), NSC756093 is the sterically less hindered structure of the series as compared to all other analogues presenting bulkier substituents at B and E rings, and it is also the only tested azapodophyllotoxin derivative which resulted in being able to significantly inhibit GBP1:PIM1 complex formation.
[0081] According to the principles of the present invention, other azapodophyllotoxin derivatives can be synthesized which have less bulky substituents at ring B and ring E of azapodophyllotoxin derivatives. These compounds will work as GBP1:PIM1 complex inhibitor, B-II tubulin inhibitor and as markers to monitor the progress of treatment or to make testing kits for over-expression of GBP1 for early detection of cancer.
[0082] Some modifications in the active structure of the azapodophyllotoxin derivatives are possible according to the principles of the present invention. For example, no side chain at the place of ethyl alcohol or all kind of side substituted or non-substituted chains in place of ethyl alcohol:
##STR00001##
[0083] Where n is number 1, 2, 3 . . . so on. R is substituted or any functionalized hydroxyl, amine, acid, aldehyde, amino acid, fatty chain, alkyl chain, or sugar etc.
[0084] Close analogues of the APA 404 which will show similar effect are: ring B and ring E as substituted or substituted phenyl, substituted or substituted heterocyclic ring of 6 to 4 atoms for example: pyridine, pyridazine, pyrimidine, pyrazine, 1,2,3-triazine, oxazole, isoxazole, thiazole, isothiazole, 1H-pyrazole, and 1H-imidazole.
[0085] Close analogues of the APA 404 according to the principles of the present invention include, but are not limited to, compounds as described in
[0086] It should be apparent from consideration of the above illustrative examples that numerous exceptionally valuable products and processes are provided by the present disclosure in its many aspects.
[0087] Viewed in light, therefore, the specific disclosures of illustrative examples are clearly not intended to be limiting upon the scope. Numerous modifications and variations are expected to occur to those skilled in the art.
[0088] Further, the purpose of the accompanying abstract is to enable the U.S. Patent and Trademark Office and the public generally, and especially the scientists, engineers, and practitioners in the art who are not familiar with patent or legal terms or phraseology, to determine quickly from a cursory inspection the nature and essence of the technical disclosure of the application. The abstract is neither intended to limit the breadth of the application, which is measured by the claims, nor is it intended to be limiting as to the scope of the disclosure in any way.