RAPID DIAGNOSTIC KIT FOR CENTRAL NERVOUS SYSTEM AFFLICTIONS AND TRAUMATIC BRAIN INJURIES
20170328916 · 2017-11-16
Inventors
- Mark Wasserman (Detroit, MI, US)
- Todd Flower (W. Bloomfield, MI, US)
- David Matzilevich (W. Bloomfield, MI, US)
Cpc classification
International classification
Abstract
A method and system for diagnosing concussions, TBI, CTE and other central nervous system disorders is provided. A diagnostic kit includes a tube containing a predefined amount of lyophilized biomarker-specific antibody conjugated to a conjugate with a color functionality, a fluid for mixing with the lyophilized biomarker-specific antibody conjugated to the conjugate within the tube, so as to reconstitute the lyophilized biomarker-specific antibody conjugated to the conjugate, resulting in a reconstituted mixture, and a swab comprising an absorbent hydrophobic material, the swab configured for absorbing cerebrospinal fluid when swabbed on a patient, wherein when the swab that has absorbed cerebrospinal fluid is placed in the tube containing the reconstituted mixture, the swab is configured to change color.
Claims
1. A diagnostic kit for diagnosing concussions, traumatic brain injury, chronic traumatic encephalopathy and other central nervous system disorders, the diagnostic kit comprising: a tube containing a predefined amount of lyophilized biomarker-specific antibody conjugated to a conjugate with a color functionality; a fluid for mixing with the lyophilized biomarker-specific antibody conjugated to the conjugate within the tube, so as to reconstitute the lyophilized biomarker-specific antibody conjugated to the conjugate, resulting in a reconstituted mixture; and a swab comprising an absorbent hydrophobic material, the swab configured for absorbing cerebrospinal fluid when swabbed on a patient, wherein when the swab that has absorbed cerebrospinal fluid is placed in the tube containing the reconstituted mixture, the swab is configured to change color.
2. The diagnostic kit of claim 1, wherein the swab includes a swab tip configured for binding to hydrophobic amino acids in said biomarker in cerebrospinal fluid of the patient.
3. The diagnostic kit of claim 2, wherein the lyophilized biomarker-specific antibody in the tube comprises about 0.5 mg of lyophilized biomarker-specific antibody.
4. The diagnostic kit of claim 3, wherein the conjugate comprises colloidal gold.
5. The diagnostic kit of claim 4, wherein the fluid for mixing with the lyophilized biomarker-specific antibody within the tube comprises about 3 ml of a predefined buffer at a specific pH and salt concentration.
6. A method for diagnosing concussions, traumatic brain injury, chronic traumatic encephalopathy and other central nervous system disorders, the method comprising: swabbing a patient with a swab comprising an absorbent hydrophobic material, so as to absorb cerebrospinal fluid of the patient into the swab; pouring a fluid into a tube containing a predefined amount of lyophilized biomarker-specific antibody conjugated to a conjugate with a color functionality, so as to reconstitute the lyophilized biomarker-specific antibody conjugated to the conjugate, resulting in a reconstituted mixture; placing the swab in the tube containing the reconstituted mixture for a predefined period of time; removing the swab from the tube and rinsing with water; and observing a change of color of the swab, wherein the swab is configured to change color when cerebrospinal fluid of the patient is absorbed into the swab.
7. The method of claim 6, wherein the step of swabbing a patient further comprises: swabbing a patient with a swab comprising an absorbent hydrophobic material, so as to absorb cerebrospinal fluid of the patient into the swab, wherein the swab includes a swab tip configured for binding to hydrophobic amino acids in said biomarker in cerebrospinal fluid of the patient.
8. The method of claim 7, wherein said predefined amount of lyophilized biomarker-specific antibody comprises about 0.5 mg of lyophilized biomarker-specific antibody.
9. The method of claim 8, wherein said conjugate comprises colloidal gold.
10. The method of claim 9, wherein said fluid comprises about 3 ml of a predefined buffer at a specific pH and a specific salt concentration.
11. The method of claim 10, wherein said predefined period of time comprises about 15 minutes.
12. A diagnostic kit for diagnosing concussions, traumatic brain injury, chronic traumatic encephalopathy and other central nervous system disorders, the diagnostic kit comprising: a swab comprising an absorbent swab, the swab configured for absorbing cerebrospinal fluid when swabbed on a patient; a high flow nitrocellulose membrane configured for lateral flow in a first direction via capillary action; a sample loading area located at a first end of the membrane and upstream of the first direction; a first set of anti-biomarker antibodies, conjugated to a conjugate with color functionality, located at a first location on the membrane and downstream of the sample loading area; a second set of anti-biomarker unconjugated antibodies located at a second location on the membrane and downstream of the first location; and a cellulose absorbent cloth located at a second end of the membrane and downstream of the first location, so as to aid the lateral flow; wherein when the sample loading area has absorbed cerebrospinal fluid transferred from the swab, and the cerebrospinal fluid flows laterally in the first direction, the first and second locations on the membrane are configured to change color.
13. The diagnostic kit of claim 12, wherein the swab includes a flocked swab tip.
14. The diagnostic kit of claim 13, wherein the conjugate comprises colored latex nanoparticles, including red latex nanoparticles.
15. The diagnostic kit of claim 14, wherein the colored latex nanoparticles comprise red latex beads.
16. The diagnostic kit of claim 13, wherein the first set of antibodies comprise IgG antibodies.
17. The diagnostic kit of claim 13, wherein the second set of antibodies comprise IgG antibodies.
18. The diagnostic kit of claim 12, wherein anti-biomarker antibodies comprise antibodies that are configured to bind to the Tau protein.
19. The diagnostic kit of claim 12, wherein anti-biomarker antibodies comprise antibodies that are configured to bind to a biomarkers selected from the group consisting of: Tau, S100B, NSE, UCH-L1, Non-Erythroid alpha II spectrin, Amyloid Beta, GFAP, APP, Phosphorylated Tau, and TDP-43.
20. The diagnostic kit of claim 12, wherein the conjugate comprises colloidal gold.
21. The diagnostic kit of claim 12, wherein the conjugate comprises a substance selected from the group consisting of: colored latex nanoparticles, colloidal gold, colloidal silver, quantum dots, fluorescent latex particles, up-converting phosphors, enzymes, colloidal carbon, colloidal platinum, lipsome-based probes, magnetic particles, and Raman-active tags.
22. The diagnostic kit of claim 12, wherein the swab includes a non-hydrophobic flocked swab.
23. The diagnostic kit of claim 12, wherein the other central nervous system disorders comprise a disorder selected from the group consisting of: multiple sclerosis, amyotrophic lateral sclerosis, and meningitis.
Description
BRIEF DESCRIPTION OF THE DRAWINGS
[0039] The accompanying drawings, which are incorporated in and constitute part of this specification, illustrate embodiments of the claimed subject matter and together with the description, serve to explain the principles of the disclosed embodiments. The embodiments illustrated herein are presently preferred, it being understood, however, that the claimed subject matter is not limited to the precise arrangements and instrumentalities shown, wherein:
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DETAILED DESCRIPTION
[0050] The disclosed embodiments are directed to a rapid, inexpensive and easy-to-use diagnostic test for concussions, TBI, CTE, ALS, MS, meningitis and a variety of central nervous system afflictions, among other things. The disclosed embodiments improve over the prior art by providing a diagnostic kit that cannot be falsely interpreted, does not require testing equipment, does not require a trip to a hospital or testing laboratory, is non-invasive and can be easily deployed at a sports field, school, workplace or battlefield. The disclosed embodiments further improve over the prior art by providing a diagnostic kit that provides a definitive result regarding concussions, TBI, CTE, ALS, MS, meningitis and a variety of central nervous system afflictions, regardless of the lack of universal consensus regarding the definition of a concussion, TBI, and other central nervous system afflictions.
[0051] The following detailed description refers to the accompanying drawings. Whenever possible, the same reference numbers are used in the drawings and the following description to refer to the same or similar elements. While disclosed embodiments may be described, modifications, adaptations, and other implementations are possible. For example, substitutions, additions or modifications may be made to the elements illustrated in the drawings, and the methods described herein may be modified by substituting reordering, or adding additional stages or components to the disclosed methods and devices. Accordingly, the following detailed description does not limit the disclosed embodiments. Instead, the proper scope of the disclosed embodiments is defined by the appended claims.
[0052] Cerebrospinal Fluid Biomarkers
[0053] The methods disclosed herein utilize the rapid detection of specific biomarkers which are released in high concentrations into the Cerebrospinal Fluid (CSF) surrounding the brain upon brain injury, including concussion. The insult causes micro-tears in the Brain-Blood Barrier (BBB) causing CSF to leak from the brain into the nasal or auditory passages. This fluid can be collected and utilized as the test material for the concussion diagnostic and even milder concussive events.
[0054] CSF biomarkers may be exploited in the disclosed diagnostic kit to assess TBI, the severity of TBI and the potential outcome of the patient. Various biomarkers can be detectable in the CSF resulting from the damage of the BBB following TBI. One of these biomarkers is the protein S100B.
[0055] S100B is traditionally referred to as an astrocytic protein, and has been demonstrated as a potential biomarker of TBI. The S100 proteins are a family of Ca.sup.+2-binding proteins that help regulate intracellular levels of Calcium. The first S100 proteins were originally discovered in 1965 and two homodimeric proteins S100-A1 (consisting of 2α subunits) and S100-B1 (consisting of 2β subunits) were subsequently identified. One study demonstrated that amateur boxers who suffered from minor head injuries found S100B levels were elevated in the CSF as assayed via lumbar puncture. The magnitude of S100B elevation has been correlated to the severity of TBI, scoring on the Glasgow Coma Scale, as well as radiological findings at hospital admission. This protein can be used in the disclosed diagnostic process as a target biomarker for detection and possible elucidation of severity of TBI, including concussion and mild concussion.
[0056] A second biomarker that can be exploited in the disclosed diagnostic process for the detection of concussion and TBI is Υ-enolase (Neuron Specific Enolase [NSE]). In studies of TBI, NSE was found to be elevated in CSF, with a higher magnitude of elevation corresponding to higher mortality and a more severe score based on the Glasgow Coma Scale for both adults and children.
[0057] Another TBI biomarker to be used with the disclosed diagnostic process for the detection of TBI is UCH-L1 (ubiquitin C-terminal hydrolase), also known as neuronal specific gene product 9.5 and its breakdown product is a novel biomarker naturally expressed in neurons and has been found to be elevated in CSF in response to TBI. The elevation of these breakdown products have been correlated to the severity and provides more predictive power for the IMPACT outcome calculator for patients with severe TBI. Recent studies have demonstrated significant increases in CSF levels of UCH-L1 after controlled impact TBI in rats. A pilot study of UCH-L1 in mild to moderate TBI, UCH-L1 was shown to be elevated 1-hour post-injury and was found to be correlated with injury severity, the GCS score and positive lesions on CT imaging.
[0058] Non-erythroid αII-spectrin is a well-known component of the cytoskeleton of all non-erythroid tissues. Neurons contain the highest concentrations in the subaxolemmal compartment and presynaptic terminals. After TBI, this protein is protealytically cleaved from the intact brain spectrin. The resulting 145-kDa fragment is specific calpain and the 120-kDa fragment is associated with caspase-3-mediated cleavage, both of which can serve as biomarkers for TBI and can be used as target biomarkers in the disclosed diagnostic process.
[0059] Amyloid β is a peptide that normally exists in monomeric form. Following injury, it polymerizes into plaques that are toxic to the tissue nearby. Rapid induction of the marker is seen in the brain within the first day post-injury in experimental animals and remains detectable through day 14 post-injury. This protein is currently used as a histological marker of axonal injury, however since it exists in high concentrations in the CSF it would make an ideal target biomarker for the disclosed diagnostic process.
[0060] Glial Fibrillary Acidic Protein (GFAP) is an acidic filament protein located within astrocytes and otherwise not found outside the Central Nervous System. Following experimental models of TBI in rats, increased GFAP mRNA expression bad been observed for at least 11 days following the initial insult. Experimental subjects with unfavorable outcomes demonstrated higher concentration GFAP than favorable subject outcomes at 11 and 14 days. Due to the higher concentration levels and the lack of GFAP in any other compartment aside from the nervous system, this protein serves as an ideal biomarker for detection in CSF using the disclosed diagnostic process for the determination of concussion and TBI.
[0061] Studies performed in both animals and humans have demonstrated that the amyloid precursor protein (APP) accumulates in neurons and axons after brain trauma and can cause axonal damage. In several studies for TBI, accumulation of APP occurs within hours of the initial insult and also occurs in patients with mild TBI. CSF levels of APP increase substantially in the first week following TBI. Due to the accumulation of this protein and its preferential expression in nervous tissue, this can be a potential biomarker for detection in a CSF lateral flow or vertical flow concussion diagnostic test.
[0062] The diagnostic process and kit described herein for concussions, TBI, CTE and other central nervous system afflictions is designed to be used with any of the biomarkers described herein, or any combination of these biomarkers. In addition, the antibodies that recognize and bind to these specific biomarkers can be conjugated to any of the conjugates listed herein or any other conjugate as well as any combination of the listed conjugates or any other conjugate.
[0063] The Tau Protein
[0064] The method and system for diagnosing a concussion (as well as other CNS afflictions) without invasive techniques or complicated wet-laboratory equipment is disclosed herein. The methods utilize the rapid detection of the tau protein which is released in high concentrations into the Cerebrospinal Fluid (CSF) surrounding the brain upon brain injury, including concussion. The insult causes micro-tears in the Brain-Blood Barrier (BBB) causing CSF to leak from the brain into the nasal or auditory passages. This fluid can be collected and utilized as the test material for the concussion diagnostic and even milder concussive events. In addition, this diagnostic kit can be used to diagnose bacterial meningitis, Amyotrophic Lateral Sclerosis (ALS) and clinically active multiple sclerosis, all of which have demonstrated to have elevated tau protein levels in the CSF.
[0065] Tau is a microtubule-associated protein localized in neuronal cells and functions as a major structural element in the axonal cytoskeleton. Total tau is abundant in the central nervous system. The hyperphosphorylation of tau is associated with several neurodegenerative diseases that are referred to as tauopathies. Tau levels also markedly influence the pathophysiology of TBI and can serve as an informative biomarker for TBI, including concussion.
[0066] After TBI, tau is proteolytically cleaved and gains access to the CSF. In one study CSF levels of c-tau were significantly elevated in TBI patients compared with control patients, and these levels correlated with clinical outcomes. Several studies have consistently demonstrated that tau CSF levels, which have been closely linked with the presence of axonal injury, increased intracranial pressure, and clinical outcome, are increased in TBI and concussion patients as compared to normal controls. And it has been demonstrated that there is a rapid rise in concentration of tau in CSF following TBI. A common occurrence associated with concussion or TBI is CSF rhinorrhea or the leakage of CSF from the nasal cavity following an intracranial insult. Normally CSF is confined to the space around the brain and spinal cord. Due to its proximity to the sinus and nasal cavity any damage to the Brain-Blood Barrier (BBB), which occurs in concussion will cause the fluid and tau protein to leak and drain out through the nose. Sometimes, instead of the nose, it can leak through the ears where it is known as CSF otorrhea.
[0067] CSF has several important functions, such as acting as a shock absorber and thereby protecting the brain and spinal cord during impact, keeping the brain afloat within the cranial cavity, and draining away large proteins and other substances that are not carried out by the vasculature. This most obvious symptom is quite frequently missed by the patient as mistakenly believed to be nasal mucus (runny nose).
[0068] In addition, the BBB hinders the assessment of biochemical changes in the brain by use of biomarkers in the blood making the CSF a much more ideal target. However, the BBB integrity can become compromised which can result in an increase in the levels of brain specific proteins in the blood. Some of these biomarkers also get proteolytically degradation in the blood and their levels might be affected by clearance from the blood via the liver or kidney. Nevertheless, the literature on potential peripheral blood biomarkers of brain injury patients with TBI is abundant. Even with these limitations, serum tau levels have recently been demonstrated to rapidly increase following mild TBI and declined after 6 hours post insult. The tau protein levels were also severity-dependent at 1 and 6 hours after TBI. These levels were higher in the severe TBI group than in the mild TBI at 1 and 6 hours.
[0069] CTE Biomarkers
[0070] The best established CSF biomarker for tangle pathology is phosphorylated tau protein. On the microscopic level, neurofibrillary tangles—the aggregation of the phosphorylated protein tau, is one of the hallmarks of CTE. The inclusions form in both neurons and glial cells. The neurofibrillary tangles in CTE are irregularly distributed with a tendency to form around blood vessels. When the neurofibrillary tangles are diffusely distributed, they are preferentially found in the superficial layers of the cerebral cortex.
[0071] It has been demonstrated that the hyperphosphorylated variant of tau impairs its binding to microtubules and its capacity to promote microtubule assembly, resulting in its self-aggregation into neurofibrillary tangles, microtubule disorganization, and impaired transport along axonal microtubules. The hyperphosphorylation is thought to result from an imbalance in the function of several protein kinases and phosphatases.
[0072] This phosphorylated/hyperphosphorylated variant of the tau protein may serve as a lateral flow or vertical flow biomarker as a biochemical indicator of CTE in high risk patients, i.e. patients that have been subjected to repeated mild TBI events. In order to test phosphorylated/hyperphosphorylated tau as a biomarker for CTE, a specific antibody that recognizes the phosphorylated variant of tau will be employed. The antibody will specifically recognize Ser202/Thr205 phosphorylated variant of tau as this variant is the most commonly associated with neurofibrillary tangles and tauopathies.
[0073] In addition to phosphorylated/hyperphosphorylated tau protein, a DNA-binding protein, TDP-43 forms concentration-dependent inclusions in CTE-affected brains and spinal cords. TDP-43 accumulation can be widespread and is found in several grey matter structures, such as the brainstem, basal ganglia, and cortical areas, as well as in subcortical white matter. While the exact function of TDP-43 is unknown, its overexpression causes neuronal degeneration and cell death in animal models. One hypothesis is that mild TBI causes axonal sheer with cytoskeleton disruption. As part of the injury response, TDP-43 is upregulated and binds to neurofilament mRNA in an attempt to stabilize the transcript. Since this protein is prone to aggregation, pathological TDP-43 deposits form, resulting in cell death. The increase in concentration upon injury and the presence of this protein in the CSF can make TDP-43 a candidate for use in this invention for the indication of CTE.
[0074] Other Biomarkers
[0075] In addition to the biomarkers listed above, the increase in concentration or the change in normal physiological localization of the listed biomarkers may cause a change in concentration or in the normal physiological localization of another biomarker, thereby leading to the indirect assay of one of the biomarkers listed above. For example, the increased concentration of tau protein in the CSF may lead to the increase in expression or localization of protein X into the CSF, this would be an indirect way to use protein X as a biomarker to assay for tau protein. These downstream “indirect” biomarkers are covered under this patent application.
[0076] Cost remains a significant barrier for many new molecular diagnostics both in high-income and low/middle income countries. Excluding reference laboratories, most local hospital microbiology labs are costs to a healthcare system, not a revenue generator. A new relatively expensive assay may cost more for a microbiology laboratory. A second ironic barrier to adoption is the standard Good Clinical Lab Practice of every laboratory internally validating a new assay. For fully automated U.S. FDA-approved molecular assays, this slows adoption for relatively rare diseases where validation takes significant time and effort. Third, as new molecular tests become available, how best to utilize such testing in a cost-effective manner in high- and low-income settings needs to be explored. Based on these limitations, there is an urgent need for a rapid, inexpensive diagnostic tool.
[0077] Neurodegenerative Disorders
[0078] Many neurodegenerative disorders share a common pathophysiological pathway involving axonal degeneration despite different etiological triggers. Analysis of cytoskeletal markers like tau in CSF is a useful approach to detect the process of axonal damage and its severity during disease course.
[0079] Multiple Sclerosis (MS) is the most common autoimmune disease of the central nervous system in young adults affecting about 30 in 100,000. The majority of MS-patients face the relapsing remitting form of the disease, in which the attacks are usually a sign of acute exacerbation of the inflammation. After an average of 19.1-21.4 years, about one third of the patient's progress to the secondary phase of the disease, which is characterized by slowly accumulating disability with or without acute exacerbations. However, about 11%-18% of the patients have primary progressive multiple sclerosis (PPMS) with continuous slowly accumulating disability.
[0080] The pathological hallmark of MS is inflammation induced demyelination and subsequent axonal loss, which may be initially accompanied by re-myelination in part of the lesions. Pathological studies revealed different types of plaques depending on the stage of the inflammatory reaction (active plaques, slowly expanding lesions, inactive plaques and re-myelinated shadow plaques). Histopathological examination of acute MS lesions revealed different patterns of tissue injury indicating possible different mechanisms of the disease cause. T cell infiltrates and macrophage-associated tissue injury (pattern 1); antibody and complement-mediated immune reactions against cells of the oligodendrocyte lineage and myelin (pattern 2); hypoxia-like injury, resulting either from inflammation-induced vascular damage or macrophage toxins that impair mitochondrial function (pattern 3); and a genetic defect or polymorphism resulting in primary susceptibility of the oligodendrocytes to immune injury (pattern 4).
[0081] It has been demonstrated that tau protein is highly elevated in CSF in primary multiple sclerosis compared to individuals without MS. Therefore, the disclosed embodiments can be used in the diagnosis of primary MS. CSF can be isolated from the potential MS patient by a routine spinal tap and applied to either tau protein diagnostic kit. Since the tau protein has been elevated to detectable levels in the CSF in MS patients, a positive test result will be a rapid method to indicate high levels of tau in the CSF which will be an indication that the individual is suffering from MS. When used in conjunction with the other battery of MS diagnostics, this embodiment can serve as a very powerful tool to aid in the diagnosis of MS.
[0082] Since the first report of ALS more than 100 years ago, the main pathophysiological mechanisms still remain unclear. Degeneration of the motor neurons is followed by an inflammatory reaction with gliosis and accumulation of activated microglia and astrocytes with the production of cytotoxic molecules and inflammatory cytokines like TNF-α and IL-1β. Glial cells also play an important role in the pathophysiology of ALS. Due to a deficient astrocyte-specific glutamate transporter (GLT-1) or excitatory amino acid transporter-2 (EAAT2), the astrocytes fail to clear up the glutamate leading to exacerbation of the glutamine excitotoxicity. Moreover, the role of astrocytes and microglia is supported by the observed increase in production of reactive oxygen species (ROS), nitric oxide and interferon-Υ. The role of microglia is more evident in the late stages on the disease.
[0083] As far as the disclosed embodiment's functionality in diagnosing ALS, some studies have demonstrated higher levels of tau compared to non-ALS patients. Studies have also demonstrated that patients in the earlier disease stages exhibit a higher level of tau than those with the advanced disease. Since the tau protein has been elevated to detectable levels in the CSF in ALS patients, a positive test result will be a rapid method to indicate high levels of tau in the CSF which will be an indication that the individual is suffering from ALS. When used in conjunction with the other battery of ALS diagnostics, this embodiment can serve as a very powerful tool to aid in the diagnosis of ALS.
[0084] Bacterial meningitis is a devastating infection associated with high mortality and morbidity particularly in the neonatal population. Prompt diagnosis and treatment are essential to achieving good outcomes in affected individuals. While the overall incidence and mortality have declined over the last several decades, morbidity associated with neonatal meningitis remains virtually unchanged.
[0085] Meningitis is a syndrome classically characterized by some combination of neck stiffness, headache, fever and altered mental status; other symptoms including nausea, vomiting and photophobia are frequently observed as well. Mortality may vary widely according to cause and setting with rates of 3-30% for bacterial meningitis depending on the organism. Aseptic meningitis (usually referring to viral meningitis but also encompassing other “culture-negative” types of meningitis) is generally considered a benign, self-limited disease with low mortality.
[0086] CT and MRI may be considered as adjunctive diagnostic tests but are generally nonspecific and show meningeal enhancement. Imaging may be helpful in cases of focal neurologic deficits, particularly when a tuberculoma or cryptococcoma is suspected. Standard diagnostic testing of CSF includes: white blood cell count with differential, total protein, and CSF/blood glucose, used in conjunction with patient history and epidemiology to support potential diagnosis. Total protein and WBC counts reflect inflammation in the CSF while decreased glucose CSF/blood ratio is a sign of glucose consumption by an active infection. These common laboratory tests cannot be the lone laboratory method of diagnosis and while overlap in their values among different diagnoses does occur, general trends emerge and are useful as they help the clinician to focus on particular possible diagnoses. Importantly, up to 40% of persons with Cryptococcus may have an unremarkable CSF WBC count which can mistakenly delay the diagnosis.
[0087] Cost remains a significant barrier for many new molecular diagnostics both in high-income and low/middle income countries. Excluding reference laboratories, most local hospital microbiology labs are costs to a healthcare system, not a revenue generator. A new relatively expensive assay may cost more for a microbiology laboratory. A second ironic barrier to adoption is the standard Good Clinical Lab Practice of every laboratory internally validating a new assay. For fully automated U.S. FDA-approved molecular assays, this slows adoption for relatively rare diseases where validation takes significant time and effort. Third, as new molecular tests become available, how best to utilize such testing in a cost-effective manner in high- and low-income settings needs to be explored. Based on these limitations, there is an urgent need for a rapid, inexpensive diagnostic tool for meningitis.
[0088] Patients with meningitis are often difficult to classify into bacterial or benign viral meningitis. On admission, patients with bacterial meningitis do not always display the typical clinical signs and laboratory findings can be confounding. CSF leukocyte count in bacterial meningitis can be lower than 100/ul indicating a sever course. CSF leukocyte count differentiation is also imprecise. More than 30% of the bacterial meningitis patients with CSF leukocyte counts less than 1,000/ul display a CSF lymphocytosis instead of the typical granulocytosis.
[0089] Facing these difficulties, a bacterial meningitis score was designed. While this score allowed the identification of all but two of more than 121 pediatric bacterial meningitis patients, too many viral meningitis patients showed scores that were indicative of bacterial meningitis. Similarly, Gram stain, the occurrence of seizure at or before presentation, peripheral leukocyte count, CSF leukocytes and protein CSF concentration could not correctly classify all pediatric bacterial meningitis patients. Of those who were, according to this score, at risk for bacterial meningitis, more than 40% and to be reclassified as viral meningitis. A score built of C-reactive protein and protein CSF content falsely classified as many as 16 of 71 pediatric patients with viral meningitis.
[0090] CSF leakage renders one more susceptible to infections of the brain such as subdural or epidural infections due to Neiseeria meningitis, Staphylococcus pneumonia or Staphylococcus aureus. On the other hand, meningitis infections can compromise the dura resulting in CSF leakage. Additionally, CNS neoplasms and or abscesses within the brain can also result in a compromised dura and blood brain barrier and may cause leakage of CSF. Therefore, the disclosed embodiments could be used to collect the CSF fluid that has been leaked though the BBB and be used to detect the tau protein thereby acting as a preliminary indicator for the above said conditions.
[0091] Tau protein has been documented to be elevated in both bacterial meningitis and encephalitis, making tau protein an ideal target for a biomarker for bacterial meningitis. In addition, this makes the disclosed embodiments an ideal candidate as a diagnostic tool for bacterial meningitis. Since a rapid, accurate diagnosis of bacterial meningitis is paramount to treatment and the survivability of bacterial meningitis, the rapid diagnosis using the disclosed embodiments will help differentiate bacterial from viral meningitis leading to a better outcome for the individual suffering from the more lethal form, bacterial meningitis.
[0092] CSF can be isolated from the afflicted individual and applied to the disclosed embodiments. If the tau protein is detected in the CSF, this would be a clear indication that the individual is suffering from bacterial meningitis where CSF tau protein levels are elevated to detectable levels compared to low levels of tau in viral meningitis. Any of the disclosed diagnostic kit designs can be used, and ideally the CSF should be used by a routine spinal tap as the source material for the diagnostic kit. Taken together with the other symptoms that the patient displays, medical history and other battery of bacterial meningitis diagnostics, this embodiment can serve as a powerful tool to assist in the diagnosis of bacterial meningitis.
[0093] The Diagnostic Kit
[0094] The method and system for diagnosing concussions, TBI, ALS, MS, and meningitis (as well as other CNS afflictions) without invasive techniques or complicated wet-laboratory equipment comprises a diagnostic kit that includes a color-changing swab 502 and a tube 702. In a first embodiment, the diagnostic kit detects a specific biomarker or combination of biomarkers (such as S100B, NSE, UCH-L1, Non-erythroid αII-spectrin, Amyloid β, GFAP, and APP) rapidly by enabling the swab to change color, indicating the presence of CSF. In the case of a rapid diagnostic tool for CTE, the biomarker panel consists of phosphorylated/hyperphpsphorylated Tau protein and/or TDP-43 protein.
[0095] The method may employ a polyurethane, foam-tipped hydrophobic nasopharyngeal swab (see
[0096] The swab containing the CSF will have the target biomarker(s), which, after insult, is typically found in elevated concentrations in the CSF and is not found in the nasal passage nor the ear canal. Tau is specifically housed in neuronal tissue and CSF. The only way that tau will be detected will be due to increased concentrations of tau due to intracranial insult and due to leakage of CSF caused by intracranial insult. The method employs buffers where the salt concentration in the tube 702 is below 750 mM (milli-molars) which will not force any secondary structure formation of the tau protein. The buffers will also be devoid of any polyanions which can induce the aggregation of tau through the masking of charged amino acids in the tau protein potentially leading to the masking of the epitope and failure of the antibody binding. The method also employs an antibody or antibodies that are designed to bind irreversibly to the target concussion biomarker. The antibody/antibodies will have a colorimetric color change indicator that will change color based on the specific biomarker.
[0097]
[0098] The process of
[0099] In step 104, the lyophilized antibody 704 will be reconstituted with about 3 mL (for example) of a liquid salt buffer at a specific salt concentration or a phosphate-buffered saline (PBS) 802, which is contained in the diagnostic kit (see
[0100] After the incubation period, the swab 502 is removed from the tube in step 110. In step 112, the swab 502 may be rinsed thoroughly with distilled water 1102, which is contained in the diagnostic kit. If the diagnostic is negative for concussions, TBI, CTE, or other CNS afflictions, then the rinsing will remove the lyophilized antibody 704 and there will be no color change to the swab 502 (see
[0101] If the diagnostic is negative for concussions, TBI, CTE, or other CNS afflictions, then there will be no color change to the swab 502. If the diagnostic is positive (meaning the biomarker is on the collection swab and has reacted with the biomarker-specific antibody), then in step 112 there will be a color change to the swab tip 504 indicating a positive test result for concussions, TBI, CTE, or other CNS afflictions. The color change is due to the color functionality of the conjugate, as described above.
[0102] A second disclosed embodiment for diagnosing concussions, TBI, CTE, or other CNS afflictions, is disclosed below. This second detection method employs a rapid lateral flow capture assay (or test) 1400 (see
[0103] Vertical flow immunoassays rely on the same basic principles as the more frequently used lateral flow immunoassays with some modifications. The most obvious difference between the two methods being the vertical and lateral flow of sample fluid. However, there can be several advantages to the vertical flow assays as compared to the traditional lateral flow assays with the most significant being reduced time (less than 5 minutes).
[0104] As with the lateral flow, vertical flow immunoassays rely on the immobilization of a capture antibody on a pad to which the test sample (with or without antigen to be detected) is applied. Detection of the bound antigen is achieved through the binding of an antigen specific antibody conjugated to colored latex nanoparticles, or other conjugates listed above, such as colloidal gold. This step completes the “sandwich” composed of a capture antibody, and antigen and a conjugated antibody and results in a direct and visually detectable colored dot indicating the presence of the antigen. This technology, like lateral flow, also allows for multiplexing, where 4 different targets can be evaluated simultaneously in a single sample in 5 minutes or less.
[0105] Multiplexing is achieved by spotting capture antibodies against different antigens at pre-determined locations and or patterns on the membrane. For easier visualization; multiplexing can be performed with nanoparticles of different colors nanoparticles. For example, one antigen can be detected using red nanoparticles and the other antigen could be detected using blue nanoparticles.
[0106] The second disclosed method also uses a non-hydrophobic nylon-flocked nasopharyngeal diagnostic swab to capture discharged CSF from afflicted individuals. The swab may be equipped with a collar at 5.5 cm as a guide to maximum insertion depth. The swab should not be hydrophobic so that the biomarker protein is transferred to the nitrocellulose membrane and does not remain bound to the swab. Since a large volume of fluid is required for this second test, the flocked swab (see
[0107] The second method employs a specific IgG anti-concussion or CTE specific biomarker antibody at a specific concentration conjugated to an aforementioned conjugate along with the proper buffer conditions (salt concentration, pH, etc.) to facilitate antibody/antigen binding found applied directly to an antibody conjugate pad located just downstream of the sample application area (e.g., lateral flow test) (see item 1400 in
[0108] The overall total length of the membrane must meet certain criteria. If the nitrocellulose membrane is too long, sample diffusion will occur and hence decreased target sample concentration could prevent the detection of the biomarker. If the length of the nitrocellulose membrane is too short, it will have a negative effect on the resolution of the color indicator, making it blurry and uneven.
[0109] The second method may include antibodies that are affinity-purified, and employ a nitrocellulose membrane with a specific pore size and has a specific capillary flow rate. Further, the nitrocellulose membrane will have a specific overall total length.
[0110] Additionally, biomarkers can be used in combination in the disclosed diagnostic test assaying for potential severity of the concussion or a combination test for both concussion and CTE, or other CNS afflictions. For the combination assay with respect to using multiple biomarkers, any or all of the following markers can be used in any combination or all together in this embodiment (tau, S100B, NSE, UCH-L1, Non-erythroid αII-spectrin, Amyloid β, GFAP, and APP) as a potential way of diagnosing the severity of the concussion. To this end, antibodies specific against each concussion biomarker will be employed. Each of these antibodies will be conjugated to one or more of the aforementioned conjugates. The antibodies will be applied directly to the conjugate pad. The embodiment testing for multiple biomarkers works similarly as the embodiment testing for a single biomarker—the difference being the result will be multiple visual lines instead of one line and a control line.
[0111] The second method further employs a bed (see item 1410 in
[0112] Capillary flow rate is important because the effective concentration of an analyte in the sample (the concussion and/or CTE-specific biomarker) is inversely proportional to the square of the change in flow rate. In a lateral flow or vertical flow test, the antigen is unable to bind once it passes the immobilized antibody because the test is designed to flow in only one direction. As a consequence of the test design the effective antigen concentration decreases with the square of the increase in flow rate because of the reduced length of time that the components of the reactive pair (antibody and antigen) are close enough to bind to each other. Further, doubling the flow rate effectively decreases the concentration of the complex by 4-fold which would make the detection of the complex formation very difficult: R=k[0.5×Ab] [0.5×Ag]=0.25 [Ab] [Ag]. The amount of antibody-antigen complex formed, R is equal to k, a rate constant related to the affinity of the antibody for the antigen, times the concentrations of the reactants AB (antibody) and AG (antigen). At a flow rate of 1×: R=k[AB][AG].
[0113] If the flow rate doubles, each component is only close enough for half the amount of time. [AB] and [AG] don't actually change; their effective concentrations change because they spend only half as much time in close proximity to bind each other.
[0114] The process 1300 of
[0115] In step 1304, the fluid on the swab will then be transferred onto the sample application area 1404 (see
[0116] The diagnostic system will already contain the biomarker antibody conjugated to a conjugate already applied and dried on the conjugate pad component of the diagnostic system. This antibody will be applied to the conjugate pad under specific buffer and pH conditions and without the use of chaotrophic agents, which could potentially physically disrupt the interactions of the antibody to the membrane.
[0117] After the application of the CSF to the sample application area 1404 of the diagnostic membrane, in step 1306, the CSF fluid will begin to migrate via lateral flow (capillary action—direction of arrow C in
[0118] Once the biomarker comes into contact with the target line 1406, in step 1308, the biomarker-specific antibody conjugated to the conjugate will bind to the biomarker and continue migrating with the protein down the membrane. The biomarker binds to the conjugate, and the conjugated antibody carries the antibody along with it during lateral flow or vertical flow. Not all of the conjugated antibody will migrate with the concussion and or specific biomarker, however, leaving some behind, and therefore leaving an initial colored line at 1406.
[0119]
[0120] The specific biomarker-conjugated antibody will migrate until it comes in contact with the second capture line 1408. The capture line 1408 also consists of a second specific antibody, IgG, which is not conjugated and binds to a different epitope of the specific biomarker. Line 1408 will “capture” the initial specific biomarker-anti-biomarker conjugated antibody and create a 2.sup.nd colored line on the diagnostic membrane in step 1310. The specific biomarker conjugated antibody is then captured by the second unconjugated specific biomarker antibody immobilized on the membrane.
[0121] If the specific biomarker is present, which will be the indicator of this diagnostic, it will be captured by the unconjugated antibody 1408 and the result will be the presence of a 2nd colored line on the nitrocellulose membrane at 1408. If the biomarker is not present, there will not be the formation of a second colored line at 1408 thereby yielding a negative result on the diagnostic. Thus, the presence of the specific biomarker will result in the presence of at least two colored lines 1406 and 1408, but the lack of the specific biomarker will not result in two colored lines. Consequently, at least two colored lines 1406 and 1408 in the diagnostic membrane results in a conclusive diagnosis of a concussion, TBI, CTE, MS, ALS, etc. in step 1312.
[0122]
[0123] The second embodiment may include antibodies at a first capture line 2008 that are affinity-purified, and employ a nitrocellulose membrane with a specific pore size and has a specific capillary flow rate. Further, the nitrocellulose membrane will have a specific overall total length. The second embodiment may also employ a 2nd unconjugated antibody that has been applied directly to the nitrocellulose membrane (at 2.sup.nd capture line 2011) downstream from the 1st anti-concussion or CTE biomarker antibody (at the first capture line 2008) and functions as the CTE test line. In addition, there is a 3rd capture line 2012 on the membrane that consists of an antibody directed against the conjugated antibody that serves as the control line. The control line 2012 antibody is specific for the conjugated biomarker antibody and this control line functions to demonstrate that the lateral flow or vertical flow test is working, i.e. this system has been designed to permit the lateral flow of antibodies and proteins through the membrane, this means that the conjugated biomarker antibody will migrate through the membrane whether or not the specific biomarker is present. The control line functions to capture this conjugated antibody whether or not it is bound to the specific antigen and this is designed to result in the presence of a single line. The control line includes antibodies configured for binding to the anti-biomarker antibodies (not to the biomarker). This control line shows that the system is working and the proteins are flowing through system.
[0124] A sample may be transferred onto the sample application area 2004 (see
[0125] The specific biomarker-conjugated antibody will migrate until it comes in contact with the second capture line 2011. The capture line 2011 also consists of a second specific antibody, IgG, which is not conjugated and binds to a different epitope of the specific biomarker. Line 2011 will “capture” the initial specific biomarker-anti-biomarker conjugated antibody and create a 2nd colored line on the diagnostic membrane. The specific biomarker conjugated antibody is then captured by the second unconjugated specific biomarker antibody immobilized on the membrane.
[0126] If the specific biomarker is present, which will be the indicator of this diagnostic, it will be captured by the unconjugated antibody and the result will be the presence of a 2nd colored line on the nitrocellulose membrane at 2011. If the biomarker is not present, there will not be the formation of a second colored line at 2011 thereby yielding a negative result on the diagnostic. Thus, the presence of the specific biomarker will result in the presence of at least two colored lines 2008 and 2011, but the lack of the specific biomarker will not result in two colored lines. Recall the control line 2012, which will result in a colored line 2012 if the CSF fluid 2104 reaches the control line. Consequently, the colored lines 2008, 2011, 2012 in the diagnostic membrane results in a conclusive diagnosis of a concussion, TBI, CTE, MS, ALS, etc.
[0127]
[0128]
[0129] Although the subject matter has been described in language specific to structural features and/or methodological acts, it is to be understood that the subject matter defined in the appended claims is not necessarily limited to the specific features or acts described above. Rather, the specific features and acts described above are disclosed as example forms of implementing the claims.