The present disclosure provides modules, instruments and methods to enrich for cells edited via nucleic acid-guided nuclease editing of live cells.

Embodiments of microfluidic systems and methods of manufacturing are described herein, which utilize an automated microfluidic plumbing technology with addressable ports capable of minimally disruptive additive and subtractive (including probing) cell and/or fluid manipulation at any desired location(s) within living cultures. The addressable microfluidic ports may be integrated throughout cell cultures in microfluidic systems for microfluidic tissue scaffolds, in two- or three-dimensional spatial arrangements. The addressable microfluidic ports may be used for controlling and/or monitoring cell behavior over time at different user-selected locations within cell cultures. Also provided are methods for fabricating such microfluidic devices and microfluidic tissue scaffolds.

In an illustrative embodiment, automated multi-module cell editing instruments are provided to automate multiple edits into nucleic acid sequences inside one or more cells.

The present disclosure provides a HTP microbial genomic engineering platform that is computationally driven and integrates molecular biology, automation, and advanced machine learning protocols. This integrative platform utilizes a suite of HTP molecular tool sets to create HTP genetic design libraries, which are derived from, inter alia, scientific insight and iterative pattern recognition. The HTP genomic engineering platform described herein is microbial strain host agnostic and therefore can be implemented across taxa. Furthermore, the disclosed platform can be implemented to modulate or improve any microbial host parameter of interest.

The present disclosure provides a HTP microbial genomic engineering platform that is computationally driven and integrates molecular biology, automation, and advanced machine learning protocols. This integrative platform utilizes a suite of HTP molecular tool sets to create HTP genetic design libraries, which are derived from, inter alia, scientific insight and iterative pattern recognition. The HTP genomic engineering platform described herein is microbial strain host agnostic and therefore can be implemented across taxa. Furthermore, the disclosed platform can be implemented to modulate or improve any microbial host parameter of interest.

In an illustrative embodiment, automated multi-module cell editing instruments are provided to automate multiple edits into nucleic acid sequences inside one or more cells.

A manual injector for cell manipulation comprising a displacement device for displacing a fluid, an injection tube connected to the displacement device, and a capillary holder connected to the injection tube for holding a microcapillary tube or a microcapillary tube connected to the injection tube, wherein the displacement device has the following: a disk-shaped main body that, on a first end face, has an hollow cylinder space which is concentric with its middle axis, a disk-shaped adjusting wheel, a helical gear, a hollow cylindrical plunger, a rotational decoupling that connects the adjusting wheel to the plunger, and a connection connected to the cylinder space to which the injection tube is connected.

In an illustrative embodiment, automated multi-module cell editing instruments are provided to automate multiple edits into nucleic acid sequences inside one or more cells.

In an illustrative embodiment, automated multi-module cell editing instruments are provided to automate multiple edits into nucleic acid sequences inside one or more cells.

The invention relates to a bioreactor comprising a tank (100) capable of being operated for a working period, said tank (100) being intended to receive a culture medium comprising a cellular culture of photosynthetic microorganisms, a light source (200) arranged to emit incident light having a chosen incoming light intensity (Iin) in the direction of the tank, a temperature probe (400) for measuring the temperature of said culture medium in the tank, and a temperature regulator (500) capable of raising and lowering the temperature of said culture medium in the tank, and further comprising a control (700) of the temperature regulator arranged to adjust the temperature of the culture medium to a low setpoint value (VCB) during a first period, and to adjust the temperature of the culture medium to a high setpoint value (VCH) during a second period, the succession of said first and second periods making it possible to induce a cellular stress in at least some of said photosynthetic microorganisms during the working period.