SPECIFIC MONOCLONAL ANTIBODY AGAINST THE N ANTIGEN OF HUMAN RESPIRATORY SYNCYTIAL VIRUS (HRSV) USEFUL FOR TREATING INFECTION, DETECTION THEREOF AND DIAGNOSIS
20210347862 · 2021-11-11
Inventors
Cpc classification
C07K16/1027
CHEMISTRY; METALLURGY
G01N33/543
PHYSICS
G01N33/581
PHYSICS
C07K2317/24
CHEMISTRY; METALLURGY
International classification
G01N33/543
PHYSICS
Abstract
The invention relates to a monoclonal antibody or fragment thereof, which recognizes the N (nucleocapsid) protein of the human respiratory syncytial virus (RSV), useful for the development of diagnostic methods for RSV infection and for the production of pharmaceutical compositions intended for the treatment, protection and/or prophylaxis of RSV infection.
Claims
1. Monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of the human respiratory syncytial virus (RSV) wherein said antibody has a variable region of the heavy chain whose CDR1, CDR2 and CDR3 have amino acid sequences with at least 97% identity to the SEQ ID No:5, SEQ ID No:6 y SEQ ID No: 7, respectively, and at the same time has a variable region of the light chain whose CDR1, CDR2 and CDR3 have amino acid sequences with at least 97% identity to the SEQ ID No:11, SEQ ID No:12 y SEQ ID No: 13, respectively.
2. Monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of RSV, according to claim 1 wherein it has a variable region of the heavy chain whose CDR1, CDR2 and CDR3 are encoded by sequences that have at least 95% identity with the SEQ ID No:8, SEQ ID No:9 y SEQ ID No:10, respectively and their respective complementary reverse sequences and has a variable region of the light chain whose CDR1, CDR2 and CDR3, are encoded by sequences that have at least 95% identity with the SEQ ID No:14, SEQ ID No:15 y SEQ ID No:16 respectively and their respective complementary reverse sequences.
3. Monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of RSV, according to claim 1 wherein the antibody is a humanized or chimeric antibody.
4. Pharmaceutical composition for the treatment and/or prophylaxis of infection caused by RSV wherein it comprises the monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of RSV of claim 1 and a pharmaceutically acceptable carrier.
5. Method for detection of human respiratory syncytial virus in a sample wherein it comprises contacting the sample with the monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of RSV of claim 1 and detecting the binding of the antibody to the antigen.
6. Method according to claim 5, wherein the technique used to detect the binding of the antibody to the antigen corresponds to ELISA, immunofluorescence, immunohistochemistry, immunochromatography, flow cytometry, cell sorter, immunoprecipitation and/or Western blot.
7. Method for detection of human respiratory syncytial virus in a sample which comprises contacting the sample with the monoclonal antibody or a fragment thereof that binds to the nucleoprotein protein N of RSV of the antibody to the antigen and detecting the binding of the antibody to the antigen; the antibody or a fragment thereof according to claim 1, is conjugated with a marker which allows its detection.
8. Method according to claim 7 wherein the antibody or a fragment thereof is bound to a marker selected from the group consisting of fluorophores, biotin, radioisotopes, metals, and enzymes.
9. Method according to claim 8 wherein the antibody or a fragment thereof is immobilized in a solid support.
10. Method according to claim 9 wherein the solid support is chosen from nitrocellulose, cellulose, polyethylene and nylon.
11. Method of treatment or prophylaxis of an infection by virus syncytial wherein it comprises administering the pharmaceutical composition of claim 4.
12. Method of claim 11 wherein the composition is administered intramuscularly.
Description
DESCRIPTION OF FIGURES
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[0010] Additionally, the results of a real-time PCR that measured the viral load (6 B), animals previously immunized with the antibody of the invention on day 4 after infection with hRSV are plotted. The uninfected control=Mock is observed, the control of non-immunized animals, with virus infection=hRSV, control of animals previously immunized with the commercial anti-F protein antibody of hRSV=Palivizumab (anti F), animals previously immunized with the antibody anti-N protein of the invention=Anti-N, and Isotype control. In all cases, the antibody dose was 5 mg/kg.
DESCRIPTION OF THE INVENTION
[0011] The present invention aims at a monoclonal antibody specific for respiratory syncytial virus (RSV). Specifically, the IgG2A monoclonal antibody secreted by a hybridoma cell line generated in the laboratory, directed specifically for the viral N antigen, which is associated with the nucleocapsid of the virus. The antibody can be used for assays for the detection and/or determination of infection by hRSV. This antibody is in its pure state and free of any other contaminating biological material.
[0012] The inventors have sequenced the antibody of the invention, where the sequence of the variable region of the heavy chain is found in SEQ ID No. 2, and the nucleotide sequence that encodes it is found in SEQ ID No. 1. Additionally, the sequence of the variable region of the light chain is found in SEQ ID No. 4, and the nucleotide sequence that encodes it is found in SEQ ID No. 3. The CDRs of this antibody are found in their peptide sequences in the SEQ ID Nos. 5, 6 and 7 for the heavy chain and in SEQ ID Nos. 11, 12 and 13 for the light chain. While the nucleotide sequences that encode them are found in SEQ ID Nos. 8, 9 and 10 for the heavy chain and in SEQ ID Nos. 14, 15 and 16 for the light chain.
[0013] In one aspect of the invention, a method is provided for the prevention and treatment of infection caused by human respiratory syncytial virus (hRSV) in a given host, which comprises the administration of a composition comprising the monoclonal antibody of the invention, in sufficient doses to prevent disease. In the case of human use, the antibody can be humanized to minimize the possibility of an immune response against the host (patient) using it.
[0014] Furthermore, the invention makes it possible to provide the formulation of any pharmaceutical form of the monoclonal antibody of the invention for the treatment or prevention of the disease caused by hRSV.
[0015] The invention also provides methods for the diagnosis and detection of hRSV viral antigens in biological samples, in which the monoclonal antibody of the invention is used in assays such as: ELISA, Immunofluorescence Microscopy, Immunohistochemistry, Flow cytometry, Cell purification (Cell Sorter, by fluorescence, by association with magnetic spheres or any separation method that uses the antibody), Immunoprecipitation, Western blot and Chromatography. The samples can be in vitro cells infected with hRSV or samples obtained from individuals suspected of infection with hRSV. In the case of samples from an individual, they may correspond to nasal secretions, nasal washes, pharyngeal secretions, bronchial washes or secretions or any other type of sample that is considered appropriate. The invention provides the opportunity to develop a method of isolation and detection of respiratory syncytial virus in biological samples and cell cultures that are put in contact with the monoclonal antibody of the invention coupled to any type of solid support, such as nitrocellulose, membrane of nylon or other support. The invention presents the opportunity to develop rapid detection kits for Respiratory Syncytial Virus or similar, containing the antibody of the invention. It also provides the possibility of incorporating any type of molecule or substrate chemically linked to the monoclonal antibody of the invention, such as fluorophores, biotin, radioisotopes, metals, enzymes and/or any chemical element coupled to the aforementioned monoclonal antibodies, as a detection method, treatment, analysis and/or diagnosis in biological samples. The invention has great potential to be used as a therapeutic method, or prophylaxis for use in humans, for which it must be humanized.
[0016] Thus, the present invention relates to a monoclonal antibody of the IgG2A isotype that specifically recognizes the N protein, of the nucleocapsid of the human Respiratory Syncytial Virus (hRSV).
[0017] A monoclonal antibody is a type of homogeneous antibody that is characterized by specifically recognizing a single antigen. They are produced by a single hybrid cell (hybridoma), which is the product of the fusion of a B lymphocyte clone and a tumor plasma cell. The property of specifically binding and with high affinity to an antigen has prompted the development of monoclonal antibodies as a very useful tool for the detection of molecules that generate great scientific, clinical and industrial interest. At present, monoclonal antibodies are widely used, both in basic and applied research, due to their specificity and the reproducibility of the results obtained with them; which allows to better substantiate the investigation. However, it is in the area of biomedicine where monoclonal antibodies have had enormous practical applications, either for diagnosis and treatment of multiple infectious diseases, and as therapy for other pathologies. Although it is true that monoclonal antibodies are used in all types of detection and diagnostic techniques, it is in the design of in vitro diagnostic kits that the best results have been obtained. For this, there are currently various rapid detection kits, such as the pregnancy test, which is based on the determination of chorionic gonadotropin (hCG) levels in urine using anti hCG antibody. Furthermore, monoclonal antibodies for therapeutic use have gained great relevance. At present there are therapeutic treatments for different pathologies, through the use of commercial monoclonal antibodies such as: Alemtuzumad, Gemtuzumab ozogamicin, Rituximab, Trastumab, etc.
[0018] hRSV is an enveloped RNA virus that belongs to the Paramyxoviridae family, Pneumovirinae subfamily (Alfonso et. Al, 2016). Its RNA is transcribed into 10 mRNAs, each of which encodes a viral protein, with the exception of M2 mRNA, which has two 22 nucleotides overlapping open reading frames (ORFs) that encode two different proteins M2-1 and M2-2. The proteins encoded by the other mRNAs are nucleoprotein (N), phosphoprotein (P), L protein, matrix protein (M), NS1, NS2, SH, fusion protein (F) and G (Collins et. Al., 2013). The N protein associates with genomic RNA forming the nucleocapsid, L is a nucleocapsid-associated RNA polymerase, P interacts with N and L, M is a non-glycosylated protein found on the inner face of the viral envelope, NS1 and NS2 are non-structural proteins, and SH, G, and F are part of the viral envelope. The RSV diagnostic kits developed so far use antibodies against the F, N and/or G proteins of RSV, and the antibodies suggested for the treatment or prophylaxis of RSV infection are also directed at the F, M2 and G proteins (CL948-96, CN101130765, U.S. Pat. No. 6,790,611, WO2009088159, Munoz-Durango et. Al., 2018).
[0019] N is a 44 Kd molecular weight polypeptide that belongs to the nucleocapsid of the Virus together with the P and L protein. Recent research indicates that this N protein would be interfering with the function of cells of the immune system—specifically dendritic cells and T lymphocytes-, (Céspedes P F et al. 2014). This finding allows us to suppose that this antigen can be considered as a target for new antiviral therapies.
[0020] From the investigations carried out for the present invention, related to the effects that viral antigens derived from human Respiratory Syncytial Virus (hRSV) have on the immune system; Specific murine monoclonal antibodies were generated for the detection of RSV antigens that have advantages over those commercially available. Specifically, the monoclonal antibody produced by the hybridoma generated in the inventors' laboratory was found to be very useful for determining hRSV infection in both in vitro and in vivo immunological assays using various detection techniques. Due to this, said antibodies provide a valuable tool for detection, diagnosis and/or therapy of infection caused by human Respiratory Syncytial Virus. The monoclonal antibody of the invention can have multiple applications for diagnostic and therapeutic use, such as its use in immunoblot techniques, immunofluorescence, immunochromatography, flow cytometry, production of pharmaceutical forms that comprise it, or any other that involves its use, including for human use. The antibody can be linked to a marker that allows its detection. Examples of possible markers correspond to fluorophores, biotin, radioisotopes, metals, enzymes and any other type of appropriate marker for antibodies.
[0021] The monoclonal antibody of the invention can be found in its natural form, as secreted by the hybridoma, or also as antigen-binding fragments. Antigen-binding fragments are fragments of the antibody capable of binding antigen, such as Fab or Fab′ fragments. In the present application, the applications of the antibody of the invention, while mentioning the use of the antibody, also include the use of anti-N monoclonal antibody binding fragments. Furthermore, in the case of the generation of compositions comprising the antibody of the invention, said compositions may comprise the murine antibody or the humanized or chimeric antibody of the invention. This is especially useful in compositions for human administration, as a way to minimize the possibility that the immune system of the individual treated with the composition will generate a response against the antibodies of the invention.
[0022] In this way, the invention refers to a monoclonal antibody or a fragment of this that binds to the nucleoprotein N protein of the human respiratory syncytial virus (hRSV) where said antibody has a variable region of the heavy chain with at least 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:2 and has a light chain variable region with at least 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:4. Likewise, the invention can also be defined as a monoclonal antibody or a fragment thereof that binds to the RSV nucleoprotein N protein, in which its heavy chain variable region is encoded in a nucleotide sequence that has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:1 and its respective complementary reverse sequence and its variable region light chain is encoded in a nucleotide sequence that has at least 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, 99%, or 100% identity with SEQ ID No:3.
[0023] In a preferred embodiment, the antibody of the invention, which binds to the nucleoprotein N protein of the human respiratory syncytial virus (hRSV) has a variable region of the heavy chain whose CDR1, CDR2 and CDR3 are encoded by sequences that have at least a 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:8, SEQ ID No:9 and SEQ ID No:10, respectively, and has a light chain variable region whose CDR1, CDR2 and CDR3 are encoded by sequences that have at least a 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:14, SEQ ID No:15 and SEQ ID No:16 respectively.
[0024] In a preferred embodiment, the antibody of the invention, which binds to the nucleoprotein N protein of the human respiratory syncytial virus (hRSV) has a variable region of the heavy chain whose CDR1, CDR2 and CDR3 have amino acid sequences with at least a 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:5, SEQ ID No:6 and SEQ ID No:7, respectively, and at the same time has a variable region of the chain light whose CDR1, CDR2 and CDR3 have amino acid sequences with at least a 95%, 96%, 97%, 98%, 99% or 100% identity with SEQ ID No:11, SEQ ID No:12 and SEQ ID No:13, respectively.
[0025] It will be apparent to the person skilled in the art that the monoclonal antibody or its functional fragment, which binds to the nucleoprotein N protein of hRSV, can be modified in the regions adjacent to the variable regions to obtain a chimeric antibody, especially a humanized antibody. Where the specificity of said chimeric or humanized antibody is given by the variable regions, as defined in the previous paragraph, that is, a variable region of the heavy chain with at least 95% identity with SEQ ID No:2 and a light chain variable region with at least 95% identity to SEQ ID No:4.
[0026] In one embodiment, the invention provides a pharmaceutical composition for the treatment and/or prophylaxis of infection caused by RSV where this composition comprises the monoclonal antibody or a fragment of this that binds to the nucleoprotein N protein of RSV as defined, that is, it has a heavy chain variable region with at least a 95% identity with SEQ ID No:2 and has a light chain variable region with at least a 95% identity with SEQ ID No:4 and a pharmaceutically acceptable carrier.
[0027] In another embodiment, the invention provides a method for detecting human respiratory syncytial virus in a sample, which comprises contacting the sample with the monoclonal antibody or a fragment of this that binds to the nucleoprotein N protein of hRSV as defined, that is, it has a heavy chain variable region with at least a 95% identity with SEQ ID No:2 and has a light chain variable region with at least a 95% identity with SEQ ID No:4 and detecting the binding of the antibody to the antigen. Where the technique used to detect the binding of the antibody with the antigen corresponds to ELISA, immunofluorescence, immunohistochemistry, immunochromatography, flow cytometry, cell sorter, immunoprecipitation, Western blot, or any other available in the art. Alternatively, the antibody or fragment thereof, as defined, that is, has a heavy chain variable region with at least a 95% identity to SEQ ID No:2 and has a light chain variable region with at least a 95% identity with SEQ ID No:4, is conjugated with a marker that allows its detection. Where said marker is selected from the group consisting of fluorophores, biotin, radioisotopes, metals, enzymes or any other marker available in the art.
[0028] In one embodiment, the antibody or fragment thereof as defined, that is, it has a heavy chain variable region with at least a 95% identity to SEQ ID No:2 and has a light chain variable region with at least a 95% identity with SEQ ID No:4, is immobilized on a solid support. Where said solid support is chosen from nitrocellulose, cellulose, polyethylene, nylon, or any other appropriate support available in the art.
[0029] Finally, the invention also aims at a method of treatment or prophylaxis of a syncytial virus infection which comprises administering to an animal or a human being, a pharmaceutical composition comprising the monoclonal antibody or a fragment of this that binds to the RSV nucleoprotein N protein that has a heavy chain variable region with at least a 95% identity to SEQ ID No:2 and has a light chain variable region with at least a 95% identity to SEQ ID No:4 and a pharmaceutically acceptable carrier. In a preferred embodiment, this pharmaceutical composition is administered intramuscularly.
[0030] Examples are described below that allow the demonstration of different applications of the monoclonal antibody of the invention.
Example 1: Obtaining the Antibody of the Invention
[0031] The inventors obtained the secretory hybridoma of the anti-N monoclonal antibody. This hybridoma was cultured for about one month and a stable culture of the cells was obtained. From this stable culture, multiple aliquots corresponding to stocks stored at −150° C. were generated. The antibody of the invention was sequenced, and the sequences are disclosed in this patent. The sequence of the variable region of the heavy chain is found in SEQ ID No. 2, and the nucleotide sequence that encodes it is found in SEQ ID No. 1. Additionally, the sequence of the variable region of the light chain is found in SEQ ID No. 4, and the nucleotide sequence that encodes it is found in SEQ ID No. 3.
Example 2: RSV Antigen Detection Assay, Anti-N Monoclonal Antibody Specificity for Purified RSV Antigens
[0032] An ELISA was performed to verify that the antibodies secreted by the hybridoma cells recognize the N protein of the hRSV. The plate was sensitized with N and F protein to evaluate the specificity of the antibody, as a control an inactivated plate was used, and plates with only the secondary antibody were also evaluated. As can be seen in
Example 3: Assay to Determine the Efficiency and Specificity of the Monoclonal Antibody to Detect Viral Antigens
[0033] After determining that the purified antibody recognizes the N protein of the hRSV, an ELISA was performed to ensure its specificity. In this ELISA, different concentrations of the primary antibodies were used and the concentration of the N protein was kept constant (50 ng). An α-M2 antibody that is directed against the viral protein M2 and a commercial anti-F antibody that is directed against the viral F protein was used as a specificity control.
Example 4. Sensitivity of Anti-N Monoclonal Antibody to RSV Antigens
[0034] In order to determine the minimum amount of N protein that the anti-N antibody of the invention was capable of detecting (analytical sensitivity), serial dilutions of protein N were made, starting from 50 ng to 0.375 ng. Then, by means of the ELISA technique and at a constant dilution of the anti-N antibody (1/5000) it was determined that the antibody is capable of reliably recognizing up to 6.25 ng of N protein, as shown in
Example 5. Detection of Human Cells Infected with RSV, by Flow Cytometry, Using the Anti-N Antibody
[0035] To evaluate the ability of the anti-N antibody to detect human cells infected with HRV, the Hep-2 cell line corresponding to a human carcinoma epithelium was used. These cells were infected in vitro for 2 hours with 1.8×10.sup.4 PFU of the hRSV that expresses the green fluorescent protein (GFP) when the virus replicates. The culture was maintained for 48 hours to promote replication of the hRSV and to be able to detect infected cells by means of flow cytometry when expressing the GFP protein. Additionally, these cells were fixed with 4% PFA and permeabilized with 0.2% saponin to stain intracellularly with the anti-N antibody. After 30 minutes of incubation with the anti-N antibody, the cells were washed and incubated with a secondary antibody coupled to allophycocyanin (APC). In this way, the infected cells (GFP+) and the anti-N antibody could be measured consecutively. Uninfected cells, infected cells unstained with the anti-N antibody and cells stained only with the secondary antibody were used as cytometry controls. In
Example 6: Evaluation of the Prophylactic Effect of the Antibody of the Invention in a RSV Infection
[0036] To evaluate the ability of the antibody of the invention to prevent the disease or at least reduce its effects in the patient, a dose of 5 mg/kg (approximately ug per animal) of anti-N monoclonal antibody was administered to BALB/c mice. Controls were performed by administering Palivizumab and Isotype control to another group of BALB/c mice. The day after passive immunization, these animals plus an unimmunized control group were infected with hRSV, on the fourth day post infection the test was ended and the number of infiltrating neutrophils in the bronchioalveolar lavage was measured, a parameter associated with the severity of the disease. The results are shown in
[0037] These examples demonstrate the specificity of the antibody of the invention, as well as its utility both in virus detection, and therefore for the development of RSV infection diagnostic methods; and in the neutralization thereof, and therefore for the production of pharmaceutical compositions intended for the treatment, protection and/or prophylaxis of RSV infection.
REFERENCES
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